LOCUS       DATLMA010000001         1029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_301795, whole genome shotgun sequence.
ACCESSION   DATLMA010000001 DATLMA010000000
VERSION     DATLMA010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301795"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VNA10_00005"
     CDS             <1..356
                     /locus_tag="VNA10_00005"
                     /inference="COORDINATES: protein motif:HMM:NF023785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoacid ferredoxin oxidoreductase"
                     /protein_id="HVG36090.1"
                     /translation="VKGMAELVKNGIEHHGFSLIDCMSPCVTYNKVNTYDFFRERVYD
                     LQKDGHDPSDMKAAFAKAIEWPFVQRDRIPLGLFYRTEKVPTYEDLEPALKKGSPVRQ
                     PLGIENPEELLSEFL"
     gene            complement(380..586)
                     /locus_tag="VNA10_00010"
     CDS             complement(380..586)
                     /locus_tag="VNA10_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36091.1"
                     /translation="MIWVAGLNKLVPDLDAGMRRTREVALPLEDQRVKRQGGQGSSIG
                     KLVVYERERPGRITLVLVGENLGF"
     gene            complement(583..>1029)
                     /locus_tag="VNA10_00015"
     CDS             complement(583..>1029)
                     /locus_tag="VNA10_00015"
                     /inference="COORDINATES: protein motif:HMM:NF014628.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LUD domain-containing protein"
                     /protein_id="HVG36092.1"
                     /translation="ELDLVRHMDAEPAFPGLNLTTKARVERTFGALKERGITPVYVPD
                     RRAALETVLGLIPKGATVAHGSSTTLLEIGLLDRLKDPTSGYRYLNAEWQAETDAARR
                     IRLRAKLSADADYYLGSVQAICETGEVVGADQSGSRQAFYVYGPPT"
BASE COUNT          186 a          323 c          327 g          193 t
ORIGIN      
        1 acgtgaaggg catggccgag cttgtcaaga acggcatcga gcaccacgga ttctccctca
       61 tcgactgcat gtccccttgc gtcacgtaca acaaggtcaa cacctacgat ttcttccgcg
      121 agcgggtcta cgacctgcag aaggacggcc acgatccgag cgacatgaaa gccgccttcg
      181 cgaaagcgat cgagtggccc ttcgtgcaac gggaccggat cccgctcggt ctgttctacc
      241 ggaccgagaa ggttccgacg tacgaggact tggagccggc gttgaagaag ggttcgcccg
      301 tgcgacagcc tctcgggatc gagaatccgg aggaactcct ctcggagttc ctgtagacga
      361 cgctcgcggg taagaccctt cagaacccta ggttttctcc gaccaggaca agcgtaatcc
      421 gccccgggcg ctctcgttcg tacaccacga gcttgccgat cgagctgcct tggccgccct
      481 ggcgcttcac ccgttggtcc tcgaggggaa gagcgacctc acgtgtgcgt cgcatgccgg
      541 catccaagtc cggcacgagt ttgttgagac ccgcgaccca gatcaagtgg ggggtccata
      601 gacgtagaac gcctggcggc tcccgctctg gtcggccccg acgacctcgc ccgtttcgca
      661 gatggcctgg acgctgccga ggtaatagtc ggcgtcggcg gagagcttcg cccgcaatcg
      721 gatgcggcgg gccgcgtcgg tttccgcctg ccattcagcg ttcaggtacc ggtaaccgga
      781 cgttgggtct ttcagacggt cgaggagacc gatttccagg agcgtggttg agctcccgtg
      841 ggccacggtc gctcccttcg ggatgagtcc aaggacggtc tcgagagccg cgcgacgatc
      901 ggggacgtag accggagtga tgcctcgttc cttcagcgcg ccgaaggttc gctcgacccg
      961 cgccttggtc gtcagattga gaccggggaa ggcgggttcg gcgtccatgt gtcgcaccaa
     1021 atctagctc
//
LOCUS       DATLMA010000002         5181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_422483, whole genome shotgun sequence.
ACCESSION   DATLMA010000002 DATLMA010000000
VERSION     DATLMA010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5181
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422483"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2387
                     /locus_tag="VNA10_00020"
     CDS             <1..2387
                     /locus_tag="VNA10_00020"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HVG36093.1"
                     /translation="DILYDISADGGSTWGTDVRINDQAGSASGSGWQIPLPAVAVDRS
                     TWTIYVSWMDRRNGNFDIYASASTDGGATWSANKRVNDDTGIAMQWMVDLAVDSHGTV
                     HAAWEDKRNGNLNIFYSNSTDGGATWSANVKISSQDTPGSYNRPGDYFALEVGPNDQP
                     YVVWTDGRGADFDIYFARGPDYANVDIIDGTSPFKWQVEPTMVINRSGTIFVGWKETT
                     DPEAAGRRVGASYSTDHGATWASNILMNQSHPTGGCSNSDPWMALTPNDVVQYAYLEY
                     NCNDGSNGLDLANTTDGTWGAVHYVRGAGGLTDKDSIIVAPTGRIYAAWDEGNVMVVT
                     WTDDGGTTWAPFKDPDDSPGGVLGAIIQVGGPVATVTVDTSPTGLPVTVDGVTSTSPV
                     VYAWPLGTTHTVGVSSPIPIAPGSRYLWLSWSDGGAITHDVIADADLNLTARFVKQHQ
                     VSVGTLPVNRTFLVDNVSMSTRTTFWWDNGAPHWLEAPPQPDDTPTGRYEWRSWSDGM
                     ARAHSVAPTGPLSLTATFVREETLGIGTSPEGLRFYVDDVEYSSSQTFWFETGSSHFV
                     FAPPSQSAPGARYTFSNWSDGGPYAHEILFSGAMTLEATFRTEFYLTVTSPYGEAGGS
                     GWYEAGTTAFASLRSTTVPGPTGVRYAFVGWTGDATGNGSMSSGIVMDGPKTANATWR
                     TEYFLQVDSDVGTVAGTGWYPAGQTVRLSAPVEVTGSGSVYRFAGWTGSVTSAEATIT
                     ISMSGPMTVRATWTPAGEIGTLSSSSAVVIGLAVVVVVLAAFVGRLAWRRRRRD"
     gene            complement(2316..2642)
                     /locus_tag="VNA10_00025"
     CDS             complement(2316..2642)
                     /locus_tag="VNA10_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36094.1"
                     /translation="MNIDRIRSILGVWTPMAIGVFIIATSINFYFTANLTNGLFLGNL
                     ESWRLICSAGAFFVGGVLLLSTYGRYAKAKEARREAAVPRSSVPPATTPREPTDEGRE
                     NDNNDR"
     gene            complement(2639..3013)
                     /locus_tag="VNA10_00030"
     CDS             complement(2639..3013)
                     /locus_tag="VNA10_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nascent polypeptide-associated complex protein"
                     /protein_id="HVG36095.1"
                     /translation="MIPGGRVNPRQMRQAMKRMGIEQEELEGVEEVVIRTANKEYVIR
                     DPNVTAMTAQGQKIWTVVGEPIVRDRADAKKTEADHAPAIPEEDVQLVAEKAGVSETE
                     ARKALEECGGEPAEAIIRLMSR"
     gene            3114..4910
                     /locus_tag="VNA10_00035"
     CDS             3114..4910
                     /locus_tag="VNA10_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013719627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis/translation initiation
                     ATPase RLI"
                     /protein_id="HVG36096.1"
                     /translation="MRVAVVFKDRCQPKRCHLECIAFCPPQRTGTEVIWIDPETTKAA
                     ISEETCISCGICTKKCPFDAIRIIGLPEALKEDLVHQYGKNAFRLFRLPVPKQGEVIG
                     LLGPNGIGKTTCVSLLSGEVAPNLGHYRRKKAYWEEVLDYFAGTELHDYLAKIASKKL
                     TTAIKPQYVDKLSKIYTGRVRDLLTKADKRGRLAELIVSLDLASFLDRDIAQLSGGEL
                     QRMAIAATMLKDADIYFFDEPSSYLDIYQRLQVAKVIQSLSKEKYVVVVEHDLAVLDF
                     LADTVFLMYGEEGAYGIIAQPRPVRTAINVYLGGYLKEENIRFRDRAIGFDTRPPRAD
                     WKAETLVTFGELTKRFDDFELTVHPGRLRKGEVVGVVGPNATGKTTFVKMLAGQETPT
                     SGAVEGRWQVSYKPQYLEAVYEGTVGELLRNTVGKKADTGYFETEILQPLKVKGMLER
                     DVATLSGGELQRVAIALCLGRDADIYLIDEPSAYLDSNQRMEAARTIRRVMEKEARTG
                     LIVDHDVYFLDMVSDSLMVFSGDPGRTGVGEGPFPMRDGMNRFLKMVGITFRRDADTN
                     RPRINKLDSRLDREQKSSGEYYYAIEDALRAS"
     gene            complement(4916..>5181)
                     /locus_tag="VNA10_00040"
     CDS             complement(4916..>5181)
                     /locus_tag="VNA10_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HVG36097.1"
                     /translation="AMATRPAEILRIPKGTIEVGRDADLIVVDPREIELVTAKRVQYK
                     CGWTPFEGMEACFPRSVYLRGEAIIEDREPVSERHGRLVHVSR"
BASE COUNT          976 a         1622 c         1632 g          951 t
ORIGIN      
        1 acgacatttt gtatgatatc tccgccgacg gggggagcac atggggcacg gatgtccgca
       61 tcaacgatca agcggggtcc gcctccggca gcggatggca gattccactc cccgccgtcg
      121 ccgtcgaccg gtcgacttgg acgatctatg tctcctggat ggaccgccgg aacgggaatt
      181 tcgacatcta cgcgagcgcg tcgacggacg gaggcgcgac gtggtccgcg aacaagcgag
      241 tcaacgacga cacgggcatc gcgatgcagt ggatggtcga ccttgcggtc gacagccacg
      301 ggaccgtcca cgccgcttgg gaagacaagc ggaacggcaa cctcaacatt ttctattcaa
      361 actcgacgga cggaggcgcg acgtggtccg cgaatgtcaa gatcagctct caggacacgc
      421 cgggctcata caaccgcccc ggcgactact tcgccctcga agtgggcccg aacgaccagc
      481 cgtacgtcgt ctggacggac ggacgtggcg ccgatttcga catctacttc gccaggggcc
      541 cggactacgc gaacgtcgac atcatcgatg ggacttctcc attcaagtgg caggtcgagc
      601 cgacgatggt catcaaccgg tccggcacca ttttcgtcgg gtggaaggag acgacggatc
      661 cggaggccgc gggccgccga gtcggcgctt cctactcgac ggaccacgga gccacctggg
      721 cttcgaacat cctgatgaat cagtcgcatc ccacgggcgg ctgctccaat tccgatccgt
      781 ggatggcgct cacgcccaac gatgtcgtac agtacgccta ccttgaatac aactgtaacg
      841 acggatcgaa tgggctcgac ctggcgaaca cgacggacgg gacgtggggc gccgtccact
      901 acgtccgcgg tgccggaggg ctgacggaca aggactcgat cattgtcgcg cccacgggcc
      961 gcatctacgc cgcctgggac gaagggaacg tgatggtcgt cacgtggacc gacgacggcg
     1021 gaaccacgtg ggcgcccttc aaggatcccg acgacagtcc gggcggggtc ctcggggcga
     1081 tcatccaggt cggcggtccg gtggcgacgg tcacggtcga cacgagcccg acgggcctcc
     1141 cggtgaccgt cgacggggtc acgtcgacga gtccggtcgt gtacgcatgg ccactcggca
     1201 cgacacacac ggttggcgtt tcatctccga ttccgatcgc tccagggtcc cgctacctat
     1261 ggctctcatg gagcgacggt ggagcgatca cccacgatgt gatcgccgac gcagacctga
     1321 acctgaccgc tcgcttcgtg aagcaacatc aagtctccgt cggcacgctc ccggtaaacc
     1381 ggacattcct ggtcgataac gtgtcgatga gcactcggac aactttctgg tgggacaacg
     1441 gcgccccgca ttggctggag gcgcctccgc agccggacga cactccaacg ggccggtacg
     1501 aatggcgttc gtggagcgac gggatggcga gggcccattc cgtcgcaccg acgggtcccc
     1561 tctccctgac ggcgacgttc gtccgtgagg agacccttgg gatcggtacc tcacccgagg
     1621 gacttcgctt ctacgtcgac gacgtcgagt attcttcttc gcagacgttc tggttcgaga
     1681 cggggtccag ccatttcgtt ttcgctcccc catcgcaatc agcccccggg gcccgttaca
     1741 cctttagcaa ctggagcgac ggcgggccct acgcccacga aattctgttt tcaggcgcga
     1801 tgacgttgga ggcgacgttc cgcaccgagt tctacctgac ggtcacgagc ccctacggcg
     1861 aggccggcgg cagcggctgg tatgaagcgg gcacgaccgc cttcgcgagt ctccgaagca
     1921 ccacggttcc tgggccgacg ggggtccggt acgcgttcgt gggatggaca ggggatgcga
     1981 ccggaaacgg gagcatgtcg tccggcatcg tgatggacgg acccaagacc gcgaacgcca
     2041 catggcgaac ggagtatttc ctccaagtcg actcggacgt cgggaccgtc gccgggaccg
     2101 ggtggtatcc cgcgggacag accgttcggc tcagcgcgcc ggtcgaggtg acgggatccg
     2161 gttccgtcta tcggttcgcg ggttggaccg ggagcgtgac atccgcggaa gcgacgatca
     2221 cgatcagcat gtccggaccc atgacggttc gagcgacgtg gacacctgca ggagagatcg
     2281 gaaccctctc gtcgtcgtcg gctgtcgtca tcggattagc ggtcgttgtt gtcgttctcg
     2341 cggccttcgt cggtcggctc gcgtggcgtc gtcgccggcg ggactgacga tctcgggacg
     2401 gcggcctccc gccgcgcttc cttcgccttg gcgtaccggc cgtatgtgga aaggaggagc
     2461 accccaccga cgaagaaggc gcccgccgaa cagatgagcc gccacgactc caggttgcct
     2521 aggaagagtc cgttcgtgag gttcgcggtg aagtagaagt tgatcgacgt ggcgataatg
     2581 aatacaccga tcgccatcgg cgtccatacg ccgaggatcg atcgaatgcg atcgatattc
     2641 atcggctcat caggcggatg atcgcttccg cgggctcacc gccgcattct tcgagggcct
     2701 tgcgggcctc cgtctccgag actccggctt tctcggcgac gagttggacg tcctcctcgg
     2761 ggatggcggg cgcgtggtcc gcctccgtct tcttcgcatc ggctcgatcc cggacgatcg
     2821 gctcgccaac gacggtccag attttctgac cctgcgcggt catcgccgtg acgttcgggt
     2881 cgcggatgac gtactccttg ttcgcggtgc ggatgacgac ctcctcgacg ccctcgagtt
     2941 cttcttgctc gatgcccatc cgcttcatgg cctggcgcat ctgccgcggg ttcacacgtc
     3001 cgcccggaat catggcatca catcgaaatg gatggtcggg actcggataa aggttctgcg
     3061 cgttcaacct ctccgtcata tgtttaaata gctcagggtt catcaaattc gtagtgcggg
     3121 tcgctgtcgt gttcaaggat cgatgtcagc ccaagcgctg ccatctcgaa tgcatcgcct
     3181 tctgcccgcc ccagcggacc ggcacggaag tcatttggat tgatccggag accacgaagg
     3241 ccgcgattag cgaggagacg tgtatctctt gcgggatctg tacgaaaaag tgtcccttcg
     3301 acgcgattcg gatcatcggt cttcctgaag ccttgaagga agatctcgta caccagtatg
     3361 gaaagaacgc gttccgtctc ttccgcctcc cggttccaaa acagggggag gtcatcggac
     3421 ttctcgggcc gaacgggatc ggcaagacca cgtgtgtcag cctcctcagc ggcgaggtcg
     3481 cgccgaatct cggccactat cgccgcaaga aagcgtattg ggaagaggtg ctcgactact
     3541 tcgcggggac ggagctccac gattatctgg cgaagattgc cagcaagaaa ttgaccaccg
     3601 ccatcaagcc acagtacgtc gacaaattga gcaagatcta tacgggccga gtccgggatc
     3661 tcctgacgaa ggccgacaag cgaggccgtc tcgccgagct catcgtgtcc ctcgacctcg
     3721 catcatttct cgatcgggat atcgcgcagc tgtcgggcgg cgagctccag cgcatggcga
     3781 ttgccgcgac gatgttgaag gatgcggaca tctacttctt cgacgagccg tcgtcgtatc
     3841 tcgacatcta tcagcgactc caggtggcaa aggtcatcca gtcgctctcc aaggagaagt
     3901 acgtcgtcgt cgtggagcac gacctggccg tcctcgattt cctcgcggac acggtcttcc
     3961 tgatgtacgg cgaagaaggt gcctacggga tcatcgcgca gccgcggccg gtccgcaccg
     4021 cgatcaatgt ttacctcggc ggctacctga aggaagagaa catccgcttc cgcgaccgcg
     4081 cgatcggctt cgatacgcgc ccgccccggg ccgactggaa ggccgagacg ctggtgacgt
     4141 tcggcgaact cacgaagcgg ttcgacgact tcgagctcac cgtccatccg ggacgcctcc
     4201 ggaaaggcga ggtggtcggc gtcgtcggac cgaacgccac gggcaagacg acattcgtca
     4261 agatgctcgc gggccaggag acgccgacgt cgggagccgt cgaagggcgt tggcaggtct
     4321 cgtacaaacc gcagtacctc gaggcggtct acgagggcac ggtcggcgag ttgctccgca
     4381 acacggtcgg aaagaaagcc gacaccggtt acttcgagac ggagatcctc cagccgctca
     4441 aggtgaaggg gatgctcgag cgggacgtcg cgacgttgtc cgggggcgag ttacaacggg
     4501 tcgcgattgc gctttgcctc gggcgcgatg cggacatcta cttgatcgac gaaccctccg
     4561 cctacctcga ttcgaaccag cgcatggagg cggcgcggac gatccggcgt gtgatggaga
     4621 aggaggcccg caccggcctc atcgtggacc acgatgtgta cttcctggac atggtctcgg
     4681 acagcctcat ggttttctcc ggagatccag gccgcaccgg cgtcggcgaa ggtccgttcc
     4741 cgatgcggga cgggatgaac cgattcctga aaatggtcgg tattacgttc cgccgcgatg
     4801 cggatacgaa ccgaccgcgg atcaacaagc tcgactcgcg tctggaccgg gaacagaagt
     4861 cctccggcga atactactac gcaatcgagg acgcattgcg cgcgtcgtga gtcggctatc
     4921 gcgaaacgtg gaccaatcga ccgtgccgtt ccgagaccgg ctcgcggtcc tcaataatgg
     4981 cttccccgcg caggtaaacg gatcggggga agcacgcttc cattccttcg aacggtgtcc
     5041 acccgcattt gtactggacg cgtttggccg taaccagttc gatttcccgc gggtccacca
     5101 cgatgaggtc cgcatcccgg cccacctcga tcgtcccctt cggaatcctc aagatctcgg
     5161 ccggtcgagt cgccatcgcg g
//
LOCUS       DATLMA010000003         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_422,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000003 DATLMA010000000
VERSION     DATLMA010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VNA10_00045"
     CDS             complement(<1..187)
                     /locus_tag="VNA10_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36098.1"
                     /translation="MSNAGRIASSQFSALGVVGPERLPPEVVELLTLALRRGATDILL
                     AVDRPPSFRVSATLTPVE"
     gene            478..969
                     /locus_tag="VNA10_00050"
     CDS             478..969
                     /locus_tag="VNA10_00050"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HVG36099.1"
                     /translation="MLKLLRRKVANEAGFTLMELIVVVLIVGILAAVGVPLYLGYVRD
                     SRLAEAKALAGATLTASQACAQNDPAGTNCTLADLAQRIGVTNAGVSGDGRWTVDIAA
                     GSEVKLDTATNKFSGGPVTVAGVGGNVADLSAGVFISAAGVVTIRCKTTAGLVAVGDP
                     TCG"
BASE COUNT          229 a          386 c          445 g          236 t
ORIGIN      
        1 cttcgaccgg ggtcagcgtc gcggacacac gaaagctggg aggccggtca accgcgagga
       61 gaatgtcggt cgcgccgcgc cgcagcgcca gagtcaagag ctcgacgacc tcgggcggaa
      121 gccgctccgg cccgacgacg ccgagcgcgg agaattggga actcgcgatg cgccctgcgt
      181 tgctcatgga caattcacac tagcaaactt caccgatctc gcgacaaatt ttcgggatcg
      241 ctggacgaga ctcggaccgt cgccgccgct gttcctctga atttcagagc ggcggcctcg
      301 aaaatttgag gtcggtggcc cgatggtcgg cttgcggacg tgcgagggtc gtgaatttcc
      361 acagcgttca acgcgacggc cctggccgaa agatcggcat ggcgcttgct ctacaaccgc
      421 acacgcgctt ccgagcgtag gccgacaaat ttccggagag gaaagggaga aagagaaatg
      481 ctgaagcttc tgagacgcaa ggtggcaaac gaggccgggt tcacgttgat ggaactgatc
      541 gtcgtcgtct tgatcgtcgg gatcctggcg gccgtgggcg tgccgctcta cctgggctat
      601 gtccgcgact cgcggctcgc cgaggcgaag gcgctggcag gcgcgacgtt gacggcctcg
      661 caggcctgtg cgcagaacga tccagctggg acgaactgca ccctcgcgga cctcgcgcag
      721 aggatcggcg tgaccaacgc tggtgtttcg ggcgatggta gatggacagt cgatatcgcg
      781 gcaggaagtg aagtgaagct cgataccgcg accaacaagt tcagcggagg cccggtcacc
      841 gtcgcgggag tcgggggcaa cgtcgctgac ctgtccgccg gggtcttcat ctccgctgcg
      901 ggcgtcgtga cgatccgttg caaaacgact gcagggctcg tcgcggtcgg cgacccgacc
      961 tgtggatgac gacgtcacgg ggagggcggc ttcctggccg cgcctcccct cacgtcgggc
     1021 gggaccggac gggggggaag tttagtcgtc tggcacggtg agaaaccccc gccctcgcgg
     1081 gggcttcact atgattcgca ttccgaccat tgcagaggcc atgacattgt ttgaatgttc
     1141 ttgggttcgg gccgcgcgat cgcgagacct tcgctcccgc gtgcgtctcc gtgacgaacg
     1201 cgggatcgcg ttgctcgaag tcctcacggc cggcgtcgtt ctgtcgatcg cgatgatcgg
     1261 tcttgcgctg atgttcagtc tcggggcgtc gttcgt
//
LOCUS       DATLMA010000004         2514 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_784260, whole genome shotgun sequence.
ACCESSION   DATLMA010000004 DATLMA010000000
VERSION     DATLMA010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784260"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VNA10_00055"
     CDS             complement(<1..219)
                     /locus_tag="VNA10_00055"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HVG36100.1"
                     /translation="MATRFAFWRKIEEDSLAEKHAQPGLLSDFILGSQDGIVNVLGII
                     LGLAAAHAPRTIIIIATLAALGAESIAMG"
     gene            344..1570
                     /locus_tag="VNA10_00060"
     CDS             344..1570
                     /locus_tag="VNA10_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36101.1"
                     /translation="MAVAALPSLLTEVETAVGASRPDAVDAAVKAFRAKAPPLELVRA
                     AARGVASHYDRASGVAPRSLAILGAAANLTSVMEPRFQVLPVLQAIAYAASEKKPATP
                     AKPPLIVSGEVTHLGRSFLFAVRAGDVAEAESIFLGMVDEGWERKMAGDMLFRAALED
                     MGEGGRKLFLSVKSWQLARAIGFKDARRILRPAVDYLVKGPGDRTAFETILTVLGKEW
                     VDLEALSSGGRPLDEPGRIRMQQIASAPSDAVCINATLSLLRDGYAASGIAEGLTVEA
                     ARRLLTAKGYDTEAARRLLFAHASRFVLNFSRTGERLYTLFQAALRVRSPEPALKADI
                     DPGTSMGKLNIIANLACRDSATANEGYNLLLADACINEYDATKATPIIRALARMTEAS
                     PKDQAAYKSWAPLFGP"
     gene            complement(1571..>2514)
                     /locus_tag="VNA10_00065"
     CDS             complement(1571..>2514)
                     /locus_tag="VNA10_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019847272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="replication factor C small subunit"
                     /protein_id="HVG36102.1"
                     /translation="YRPKSLDEVVGQEEIIERLMAYAKTGNLPHLLFAGPAGTGKTTS
                     AIALARDMFGENWRQNYYELNSSDERGIETVRTKVKEIARIAPFGGSNFKIIFLDEAD
                     NLTADAQAALRRTMETYSKTSRFILSANYSSRLIEPIQSRTAVFRFRPLKPDAIAEYI
                     GRIAKSEKLKITDDGMEALVYVAEGDMRRAVNALQVAASLGSTVDAEVLYKVSSTVRP
                     EEVKGLIEKALEGEFLRAREVLDRLLIEYGLSGEDIVRQLHRTVFDLNIPDESKVRLL
                     DRIGETDFRLTEGSSERIQIESLLAHFALIGQDLSKK"
BASE COUNT          395 a          831 c          824 g          464 t
ORIGIN      
        1 ccccatggcg atggattctg cacccagcgc cgcgagggtc gcgataatga tgatcgttct
       61 cggggcatgg gctgccgcga gtccgaggat gatgccgagg acgttgacga tgccgtcctg
      121 gctcccgagg atgaagtcgg agaggaggcc gggctgcgcg tgcttctccg cgagggagtc
      181 ctcctcgatc tttcgccaga acgcgaagcg cgtcgccatg ggcccgccac cctaagagtc
      241 agtcggattt gaccgttgcg ccgggctccg aaaatcaggt gcgtggtcct tcgagcgttc
      301 cgggacgaag gtttttctaa gcacctcgtg atgggcgcgc ccgatggcgg tcgcggccct
      361 cccgtcgctg ctgacggagg tcgagaccgc ggtgggcgcc tcccggcctg acgccgtcga
      421 cgcggccgtc aaggccttcc gcgcgaaggc cccgccgctc gaactcgtcc gcgccgcggc
      481 ccgcggcgtc gcctcgcatt acgatcgcgc gtccggggtg gcgccgcgaa gcctcgcgat
      541 cctcggcgcg gcggcgaacc tcacctccgt gatggaacct cggttccagg tcctcccggt
      601 cttgcaagcc atcgcctatg ccgcatccga gaagaagcca gccactccgg cgaagccgcc
      661 cctcatcgta tcgggtgagg tcacgcatct cgggcgatcg ttcctctttg cggtccgggc
      721 gggcgacgtc gccgaggcgg agtcgatctt cctcgggatg gtcgacgaag gctgggagcg
      781 gaagatggcg ggagacatgc tcttccgcgc ggcgctcgag gacatgggcg agggcggtcg
      841 gaagctgttc ctttcggtca agtcgtggca actcgcccgc gccatcggct tcaaagacgc
      901 ccgcaggata ttgcggcccg ccgtcgacta tctcgtgaaa ggcccggggg atcgcaccgc
      961 attcgagacg attctcacgg tcctcgggaa ggaatgggtc gacctcgagg ccctatcgtc
     1021 cggtgggcgg ccgttggacg agcccgggcg catacggatg cagcagattg catcggcccc
     1081 gagcgatgcc gtttgcatca atgcgaccct ttcgttgctc cgggacggat atgcagcgtc
     1141 cggcatcgcg gaagggctga ccgtcgaggc ggcccgaagg ctgctgaccg ccaaaggcta
     1201 cgacaccgaa gccgcccgcc ggctcttgtt cgcccacgcg tcgcggttcg tcctgaattt
     1261 cagccgcacg ggtgagcgcc tctacaccct gttccaggcg gcgctccgcg ttcgctcccc
     1321 cgaaccggcg ctcaaagcgg acatcgaccc ggggacctcc atgggcaagc tcaatatcat
     1381 cgcgaacctc gcatgccgtg attcagcaac ggccaacgag ggctacaatc tccttctcgc
     1441 ggatgcgtgc atcaacgaat acgacgcgac gaaggctacc ccgatcatcc gagcgctcgc
     1501 ccggatgacc gaggcgtcgc cgaaggatca agcggcgtac aagtcgtggg ccccgctctt
     1561 cgggccgtga tcacttcttg ctcaggtcct ggccgatcag cgcgaagtgt gccaggagcg
     1621 actcgatctg gattcgctcg ctgctcccct ccgtgaggcg gaagtccgtc tccccgatcc
     1681 ggtcgagcag acgcaccttc gattcgtccg ggatgttcag gtcgaagacg gtccggtgta
     1741 gttgccggac gatgtcttcg ccggagaggc cgtactcgat caggagtcga tcgaggacct
     1801 cgcgggcccg gaggaactcg ccctccaaag ccttctcgat gaggcccttc acttcctcgg
     1861 gtcggaccgt gctcgagacc ttgtagagca cttccgcgtc gaccgtcgag ccaagcgagg
     1921 cggcgacctg cagcgcgttc acggcccgcc gcatgtcccc ttcggcgacg tagacgagcg
     1981 cctccatccc gtcgtccgtg atcttgagtt tctcggattt cgcgatccgt ccgatgtact
     2041 cggcgatcgc atccggcttg agcggtcgga agcggaagac cgccgtgcgg gattggatcg
     2101 gctcgatgag ccgcgacgag tagttggcgg acaagatgaa tcgggacgtc ttcgagtatg
     2161 tctccatcgt gcggcgcaag gccgcctgcg cgtcggccgt gaggttgtcg gcctcgtcga
     2221 ggaagatgat cttgaagttc gagccgccga acggcgcgat gcgggcgatc tccttgacct
     2281 tcgtccgcac cgtctcgatt ccgcgctcgt cgctgctgtt cagttcgtag tagttctggc
     2341 gccagttctc gccgaacatg tcgcgggcca gggcgatcgc ggacgtcgtc ttgccggtcc
     2401 ccgccgggcc cgcgaacagg agatgcggca ggttccccgt cttcgcgtag gccatgaggc
     2461 gctcgatgat ttcctcctgg ccgaccacct cgtccaggct cttcggtcga tact
//
LOCUS       DATLMA010000005         2469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_844644, whole genome shotgun sequence.
ACCESSION   DATLMA010000005 DATLMA010000000
VERSION     DATLMA010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844644"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..1355
                     /locus_tag="VNA10_00070"
     CDS             12..1355
                     /locus_tag="VNA10_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010878735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HVG36103.1"
                     /translation="MQAIRTEPTRASDVKILLDVEDLPRAWYNILPDLPAPFPPYLHP
                     GTKEPVPPQAFEPLFPKELIRQEMSPNRAEPIPDELREAYFRLGRPTPLYRAKRLEAF
                     LKTPARIYYKREDLSPVGSHKPNTAFAQAYFAAQEGVEALATETGAGQWGSALALATN
                     YFGLKAKVFMVRVSYDQKPYRKYVMNLYGADVIPSPSDQTNVGKKFLAQDPDHPGSLG
                     IAISEAIEAAVTGKNTKYSLGSVLNHVLMHQTIIGLEVQKQFEQADITPDFMVGSVGG
                     GSNFAGFTYPMIGERIHGNVETRFVAVEPESVPSMTQGRYEYDFGDTGEMTPLVKMHT
                     LGHTFVPPRIHAGGLRYHGTAATLSVLLDSGLVEPRAVDQLGTFQAGEIFAKTEGLIP
                     APETCHAIRGAIDLALEAKERHEETVIAFNYSGHGLLDLEGYRQFMEGNLKNNGK"
     gene            1462..>2469
                     /locus_tag="VNA10_00075"
     CDS             1462..>2469
                     /locus_tag="VNA10_00075"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HVG36104.1"
                     /translation="MPSASVDVGVDVGGTFTDFVGFHGRRVVTAKLPSTPDPEQAVIE
                     GMRDLGAAGMAHGTTVATNAILERRGARTAFVTTAGFEHLLLIGRQNRPSLYDLRVTR
                     PPPAVPRERCFGLAERVDARGRVLQAPTRRDLEDLARRVRSSGAESVAVSLLFSFLHP
                     AHERRVAKALAGLPVSLSHEVLAEFREFERSSTTALDAYVKPLVIRYLQSLEKAVRGD
                     FYVMKSSGGVVSHRAIIHRPVDMILSGPAGGVAAAVAVARATDQGNLLTFDMGGTSAD
                     FSTIVRGAASWTSEAMIDAFPLALPVIDIESVGAGGGSVAWIDAGRALRVGPQSAGAT
                     PG"
BASE COUNT          446 a          804 c          817 g          402 t
ORIGIN      
        1 cggtgagacc gatgcaggcg attcgaacag aaccaactag ggcgagcgac gtgaaaatcc
       61 tcctcgacgt ggaggacctg ccgcgggcgt ggtacaacat cctcccggac ctccccgcgc
      121 ccttcccgcc gtacctccac ccggggacga aggagccggt gcctccacag gcgtttgagc
      181 cgctgttccc gaaggagctc atccgccagg agatgagtcc gaatcgggcc gagccgattc
      241 ccgacgagct ccgagaagcg tacttccgcc tgggccggcc gacgccactg tatcgagcga
      301 aacggctcga ggcgttcctc aagacgccgg cccggatcta ctacaagcgg gaggatctct
      361 cgccggtcgg ctcgcacaag ccgaacacgg cgttcgccca agcctacttc gcggctcagg
      421 aaggggtcga ggccctcgcg accgagactg gcgcaggtca gtggggatcc gccctcgcgc
      481 tcgcgacgaa ttacttcgga ctgaaggcga aggtgttcat ggtgcgcgtc tcgtacgatc
      541 agaagccgta ccggaagtac gtgatgaact tgtacggagc cgacgtcatc ccgagtccga
      601 gcgatcagac gaacgtcggc aagaagttcc tcgctcaaga cccggaccat ccggggtccc
      661 tcgggatcgc gatctccgag gcgatcgagg ccgcggtcac cgggaagaac acgaagtact
      721 cgctgggcag cgtcctgaac cacgtcctga tgcaccagac gatcatcggc ctcgaggtgc
      781 agaagcagtt cgagcaggcg gacatcacgc ccgacttcat ggtcggcagc gtcgggggcg
      841 gttcgaactt cgcgggcttc acgtatccga tgatcggcga gcgaatccat ggcaacgtcg
      901 aaacgcggtt cgtcgcggtc gagcccgagt ccgtcccttc gatgacgcaa ggccgctacg
      961 aatacgactt cggcgacacg ggggagatga cgccgctcgt gaagatgcac accctgggcc
     1021 ataccttcgt cccgccgcgg atccatgcgg gcggcctgcg gtaccacggg accgccgcga
     1081 cgctcagcgt cttgctggac tcggggttgg tcgagccgcg cgcggtggac cagctcggga
     1141 cgttccaggc gggcgagatt ttcgcgaaga cggaaggtct gatccccgcc ccggagacgt
     1201 gccacgcgat tcgcggggcg atcgacctcg cgctcgaggc gaaggagcgg cacgaagaaa
     1261 ccgtcattgc gttcaactac agcggccacg gcctgctgga cctcgaaggc taccgccagt
     1321 tcatggaggg caacctgaag aacaacggaa agtgagaggg catcgtaagc cgcctggcgc
     1381 catctcctcc tcttttccga atgcggaact tcgacgaggg cgccaggcac taatccctcg
     1441 agtcaaagac atgagccgac aatgccatcc gcttccgtgg acgtcggcgt ggatgtcggc
     1501 ggtaccttca ccgacttcgt cgggtttcat ggtcgtaggg tcgtgacggc aaagttgccg
     1561 agcacgcccg atccagagca agcggtaatc gaggggatgc gcgacctcgg cgcggcgggt
     1621 atggcccatg gcaccacggt ggccacgaac gcgatcctgg agcggagagg ggctcgcacc
     1681 gcattcgtga cgaccgccgg tttcgaacat ctcttgctga tcggccgtca gaatcggcct
     1741 tcgctgtacg atctgcgggt cacccggccc ccgcccgccg tcccgaggga gcggtgcttc
     1801 gggctcgcag aaagggtgga cgcgcgcgga cgcgtcctcc aggccccgac gaggcgcgac
     1861 ttggaggacc tggcccgaag agttcgatcg agtggggccg agtcggtcgc ggtctctctc
     1921 ctcttctcgt tccttcatcc tgcgcacgag cgacgcgttg cgaaagctct cgccggcctg
     1981 cccgtttcct tgagccacga ggtactcgcc gagttccgcg aattcgagcg atcgtcgacc
     2041 acagccctcg atgcatacgt gaagccgctc gtcatccggt atctccaatc cctcgagaag
     2101 gccgtccgcg gggacttcta cgtgatgaaa tcctccggcg gcgtggtctc ccatcgagcc
     2161 atcatacacc gaccggtcga catgatcctg agcggaccgg cgggcggagt cgccgcggcg
     2221 gtcgcggtgg cccgggcgac cgaccaggga aacctcctca cgttcgacat gggcggcacg
     2281 agtgcggact tctcgaccat cgttcgcggt gcggcgagtt ggacgagcga ggccatgatc
     2341 gacgcgttcc cgctcgccct tcccgtcatt gacatcgagt cggtgggtgc gggcggtggg
     2401 agcgtcgcct ggatcgacgc cggccgggcc ttacgggtcg ggccgcagag cgcgggcgcg
     2461 acgccgggc
//
LOCUS       DATLMA010000006         1223 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_422546, whole genome shotgun sequence.
ACCESSION   DATLMA010000006 DATLMA010000000
VERSION     DATLMA010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422546"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..940)
                     /locus_tag="VNA10_00080"
     CDS             complement(<1..940)
                     /locus_tag="VNA10_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36105.1"
                     /translation="MRIRPLGLIAITIALAGIAVAAVAFGPANLVRLGSPSGTNTPQA
                     SSVGVPTWHVGDSWTYNVNSTPPDVIIAGPTWGSPSLTGTLTRTVASADGSEYNVTVH
                     GSFHLGSVFDAARDGNMTNASTLLLFRPVMENATVDGYAVYRASDLAELKEVRTVQLK
                     SALWTARGWFNISFTATVQTTYEPALDIWAFPIEENKTWNVSSNATIHAMIAWRFDGP
                     NDSFGFWHNFNVTVPIRLMLHSGVLENVTTPAGTFSSIPVRLALPTIDRLATDDREGP
                     VVGLGGDECGQPRLAAEAWFSGDVGNVVRAVSFIGGM"
BASE COUNT          229 a          378 c          394 g          222 t
ORIGIN      
        1 tcattccgcc gatgaaggaa accgcccgca cgacgtttcc gacgtcgcca ctgaaccacg
       61 cttcggccgc gagacgcggc tggccgcact cgtcgcctcc gaggcccacg acggggcctt
      121 cgcgatcgtc tgttgcgagg cgatcaatcg tcgggagggc caggcggacc gggatcgacg
      181 agaacgtccc cgcaggcgtc gtcacgttct ccaacacgcc tgagtggagc atcagccgga
      241 taggcaccgt cacgttgaaa ttgtgccaga acccgaacga atcgttcggt ccgtcgaagc
      301 gccaggcgat catcgcatgg atcgtcgcgt tgctcgagac gttccaggtc ttgttctcct
      361 cgatcgggaa ggcccagatg tcgagggcag gctcgtacgt cgtctggacg gtcgcggtga
      421 acgaaatgtt gaaccaaccg cgggcggtcc agagcgcgct cttcaactgg acggtacgga
      481 cctccttcaa ctctgcgaga tcggaggcgc gatacacggc gtacccgtcg accgtcgcgt
      541 tctccatcac cggccgaaac agcagcagcg tcgaggcgtt cgtcatgttc ccatcccggg
      601 cggcgtcgaa cacgctcccg aggtggaacg agccgtgcac ggtcacatta tattccgagc
      661 cgtcggcgga ggcgactgtg cgggtgagcg ttcccgtgag ggatgggctt ccccaggtcg
      721 gccctgcgat gatgacgtcg ggcggagtcg agttgacgtt gtacgtccac gaatctccga
      781 cgtgccacgt cggaacgccg accgacgagg cctgcggcgt gttcgtaccc gatggcgagc
      841 ctaacctcac gaggttcgcg gggccgaatg ccactgctgc aaccgcgatg cccgccaacg
      901 cgatcgtaat cgcgatcaag ccgaggggtc tgattcgcat cccgttcctc ctgttgcgga
      961 ggcggcgaag aacgcgcgaa gtatatgggc gttgttagac agatgtagaa cccgcgtccg
     1021 ccgttgaaac atgttcagga gtgataatgt gcgcgaccga accggggaac tccgaaggca
     1081 cgcccgcacg gacggatggg ctcggggcct cccggccttc tatgcttgca gccatattat
     1141 agtcgcattc gacggcgctc acgtcgattg acgagggggt ttgtgcaagc gttcatcaca
     1201 tcggcaagcc tttcgagcgg gat
//
LOCUS       DATLMA010000007         1096 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_784401, whole genome shotgun sequence.
ACCESSION   DATLMA010000007 DATLMA010000000
VERSION     DATLMA010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784401"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VNA10_00085"
     CDS             <1..201
                     /locus_tag="VNA10_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36106.1"
                     /translation="DAACTYKWAMLTDGLVDRDKLLITCKDCNGSWDLQTGQPKELPA
                     KFPLTSYRIESVADDLIVTFTY"
     gene            215..445
                     /locus_tag="VNA10_00090"
     CDS             215..445
                     /locus_tag="VNA10_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36107.1"
                     /translation="MADEKDQQFTRMWNEENKAKRAKFRNLMKAKLDVLHVEVTEANA
                     RAFWNGRLAVRQPERIYQMPERPEGRRPPRRR"
     gene            complement(564..>1096)
                     /locus_tag="VNA10_00095"
     CDS             complement(564..>1096)
                     /locus_tag="VNA10_00095"
                     /inference="COORDINATES: protein motif:HMM:NF044805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36108.1"
                     /translation="DKAMTKVKDLTPASKQVNVLVKVVSLSEEREITSKFGEARKLVE
                     ATVGDETGTVLLTLWNDQIGQIQKDETLLIDNGYVTLVRGHIRLNVGKYGTMAKSEQM
                     IENVNTALDVSAVEYEREPRYRSGGYSGERRERSGGGDRQFEFGTFSGNRSGGGSSGG
                     SGGRDRDRRDRGRRRY"
BASE COUNT          201 a          350 c          334 g          211 t
ORIGIN      
        1 gacgccgcct gcacgtacaa gtgggcgatg ttgacggacg gccttgtcga ccgcgataag
       61 ctcctgatca catgcaagga ctgcaacgga tcgtgggact tgcagacggg ccagccgaag
      121 gagctccctg cgaagttccc gctcacgtcc taccggattg aatccgtcgc cgatgacctg
      181 atcgtgacgt tcacgtattg aggcggtggc accgatggcc gacgagaagg accagcaatt
      241 cacgcggatg tggaacgaag agaacaaggc gaagcgtgcg aagttccgga acctcatgaa
      301 ggcgaagctg gacgtgctgc acgtcgaggt gacggaggcg aacgcccgcg cgttctggaa
      361 cggccggctc gcggtgcgcc agcccgaacg gatctaccag atgccggagc gtccggaagg
      421 gcgaaggcct ccgcggcgcc gatgatctat ccgtctggat ccgaaaccat cgcgaaccgc
      481 gaaaaagggc cagcgttttc gccggtccat cagaaaaatg aaaagggcct ggcccgaagg
      541 ccagacgaaa aggtgaaggt caatcagtac cggcgtcgcc cgcggtcccg ccggtcccgg
      601 tcgcgaccgc cgctgccgcc gctgctgcca ccgccgctcc ggttgccgct gaaggtcccg
      661 aactcgaact gtcggtcccc gccgccgctg cgctcccgtc gctcgccgct gtagccaccg
      721 cttcggtagc gcggctcgcg ctcgtattcg actgcgctga cgtcgagcgc cgtattgacg
      781 ttctcgatca tctgctccga cttcgccatc gtgccgtact tcccgacgtt cagccggatg
      841 tgcccgcgca cgagggtgac gtagccgttg tcgatgagga gcgtctcgtc cttctggatc
      901 tgaccgattt ggtcgttcca caaggtcagg aggacggtcc cggtctcgtc gcctaccgtc
      961 gcttcgacga gctttctcgc ttcgccgaac ttcgacgtga tctctctctc ttcactcaga
     1021 ctgacgacct tgaccaagac attcacttgc ttggacgcgg gggtcaagtc tttcacttta
     1081 gtcattgctt tgtctt
//
LOCUS       DATLMA010000008         1398 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_241791, whole genome shotgun sequence.
ACCESSION   DATLMA010000008 DATLMA010000000
VERSION     DATLMA010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241791"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..283)
                     /locus_tag="VNA10_00100"
     CDS             complement(62..283)
                     /locus_tag="VNA10_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36109.1"
                     /translation="MMRALMIDLVLLVLGIILAIAGWFLTPGAASFQFPGPINVAGQS
                     LIALGLTFIVVAVGLLLAGAAERMMPGTE"
     gene            complement(287..793)
                     /locus_tag="VNA10_00105"
     CDS             complement(287..793)
                     /locus_tag="VNA10_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36110.1"
                     /translation="MLATVTGLWFPGVKLPQFDFNTLNGRLALGDLSFPASSTTFIVG
                     GIIHMTDGIIWALIFGLIISPVLGVVIKPLRPMTPTVNLVKGIIWGGALWIISSALWM
                     PLLIGAFLGPTLTGPFGLPCGVGPFLTCFGPYGVQALFTNLFWHMIWGVNLGLLFNPM
                     RAAGRVRW"
     gene            1005..>1398
                     /locus_tag="VNA10_00110"
     CDS             1005..>1398
                     /locus_tag="VNA10_00110"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HVG36111.1"
                     /translation="MTDVEERGLFIGGAFVPAHSGATFPVHNPHNDEVFVRVAEARED
                     DVEDAIAAARSAFEGPWGALTPKERGKMLLRLARLIQDQGESIARLEAKNSGHPIRDV
                     RRFDLVRTVDWFEYFAGMTTKIQGDVIPS"
BASE COUNT          297 a          430 c          447 g          224 t
ORIGIN      
        1 agaccggaag ttcaggcgcc tccgctccga accggccaaa cgcttcttgc agaacgaatg
       61 gtcactcggt gcccggcatc atgcgctctg ccgcgcccgc gagaagcagt ccgaccgcga
      121 ccacgatgaa cgtcaggccc agcgcgatga gcgactgccc agctacgttg atcgggcctg
      181 ggaactggaa cgaggccgcg ccgggcgtca ggaaccatcc ggcgatcgcg aggatgatgc
      241 cgaggacgag cagcacgagg tcgatcatca acgcacgcat catggcttac cacctcactc
      301 ggccggcggc acgcatcggg ttgaacagga ggccgagatt gacaccccag atcatgtgcc
      361 agaacaagtt cgtgaagagg gcctggaccc catacgggcc gaagcaggtg aggaacggtc
      421 cgactccgca cggaagtccg aaggggcccg tcaacgtcgg accgaggaac gctccgatca
      481 ggaggggcat ccaaagagcc gaactgataa tccaaagggc cccgccccaa atgatccctt
      541 tgacgaggtt gacggtcggg gtcatgggcc gcaggggctt gatgacgaca cccagaacgg
      601 gactgataat caggccgaag atcaaagccc aaatgatccc atcagtcatg tgaataatgc
      661 cgccgacgat gaacgtcgtc gacgacgcgg gaaagctgag atcccccaaa gcaaggcgcc
      721 cattcagggt attgaagtcg aattgcggaa gcttgacgcc ggggaaccac agcccggtga
      781 cggtcgcgag catcgtggcg atgaaccccg ccgcggccgc gcttgtcgct gcagtcttgc
      841 caatcagaaa tctgacgttc gaatccgacg cctcgtccgt cctctcgccc ccggccgggc
      901 accgttggct gcattatata acctttcaca gacgagccag acctcgttcg cgtcggaagg
      961 gttcggacga aatctcttta ccgtccggtt ccctctgagc gtccatgacg gacgtcgaag
     1021 aacggggcct gttcatcggc ggagcgttcg tcccggccca ctcgggcgcg acgtttccgg
     1081 tgcacaatcc gcacaacgat gaggtgtttg tgcgggtcgc tgaggcccgc gaagacgacg
     1141 tcgaggacgc gattgccgcc gcccggtccg cgttcgaagg cccgtggggg gctttgacgc
     1201 cgaaagagcg ggggaaaatg ctcctccggc tcgcacgtct catccaggac cagggggagt
     1261 cgatcgcccg attggaggcg aagaactcgg gacatccgat ccgcgatgtc cggcggttcg
     1321 acctcgtgcg gacggtggac tggttcgagt acttcgccgg catgacgacg aagattcagg
     1381 gggacgtgat tccgtcct
//
LOCUS       DATLMA010000009         1806 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_844951, whole genome shotgun sequence.
ACCESSION   DATLMA010000009 DATLMA010000000
VERSION     DATLMA010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844951"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VNA10_00115"
     CDS             complement(<1..465)
                     /locus_tag="VNA10_00115"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HVG36112.1"
                     /translation="MGEHGGSLELVKYEGLPIGAAAPDFSLPAVDGKTYSLASFRDKP
                     VLAVAFWCNHCPYVQAWEERTIAVQRDYAGRGVQFVMINANDAESYPEDDFPNMVERS
                     KRKGYNFPYLRDESQKVAEAYGAVCTPDFFVFDAARKLRYRGKLDDSKEPKAV"
     gene            603..>1806
                     /gene="pyrG"
                     /locus_tag="VNA10_00120"
     CDS             603..>1806
                     /gene="pyrG"
                     /locus_tag="VNA10_00120"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008083617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HVG36113.1"
                     /translation="MKYVIVTGGVLSGLGKGISTSSIGVLLKSKGLKVCPVKIDPYLN
                     VDAGTMNPYQHGEVFVLDDGSEVDLDLGNYERFLDVNLTGDHNITTGKVYRAVIEKER
                     RGDYLGRTVQIIPHITDEIKAQLQAVGEKERADIVLVEVGGTVGDIEGMPFLEAVRQL
                     AQEIGKENLLFVHTTLVPVMGAVGEQKTKPTQQSVRELRSMGIQPNVIIARGEHSLEP
                     DIKKKIAFFTDVPVEGIISAPDASTIYDVPLLFDGQGLTEYIVKTLRLKPKDEDLREW
                     KAFLENLKNPDKEVTIALVGKYTHLKDSYISHIEAFHHAGAHARVHVKLKWVESVDLE
                     KHGTKLLEGADGILVPGGFGDRGIEGKIAATRYAAEHDIPFQGVCLGFQLATIGFARD
                     VLGLKGANS"
BASE COUNT          370 a          560 c          552 g          324 t
ORIGIN      
        1 cacggccttc ggttccttcg agtcgtcgag ctttccgcgg tatcgcagtt tccgggcggc
       61 gtcgaacacg aagaagtcgg gcgtgcacac cgcgccgtac gcttccgcga ccttttggct
      121 ctcgtctcgg aggtacggga agttgtagcc tttccgcttc gagcgttcga ccatgttcgg
      181 gaagtcgtct tccggatagc tctcggcgtc attcgcgttg atcatcacga actgcacgcc
      241 ccttcccgcg taatcgcgct ggacggcgat cgtgcgttct tcccaggcct ggacgtaggg
      301 gcagtgattg caccaaaacg cgacggcgag gaccggcttg tcccggaagg aagcgagcga
      361 gtatgttttc ccatcgaccg cgggcagcga gaagtccgga gccgccgctc cgatcggaag
      421 tccttcgtac ttcacgagct ccaaggaacc accgtgctca cccattcgtg cggtcgatat
      481 aggctttcgc tcgcgtcatc cggctctgcg tggccgcgac gagcgctcgt gcgcgctgat
      541 tcgccgattt caagacacaa actttatcac cgacccgccg gatggagcat tcccgtgatt
      601 gcgtgaagta tgtcattgtc acgggaggcg ttttgtcagg actcgggaag ggcatcagca
      661 cttcctcgat cggcgtcctg ttgaagtcga aaggactgaa ggtctgtccc gtcaaaatcg
      721 acccgtatct gaacgtcgac gcgggcacga tgaatcccta ccagcatggc gaggtgttcg
      781 tcctcgacga cggctcggag gtcgacctcg acctcggcaa ctacgaacgg ttcctggacg
      841 tcaacctgac gggcgaccac aacatcacaa cgggcaaggt ctatcgcgcg gtcatcgaga
      901 aggagcgccg cggggactat ctcggtcgca cggtccagat catcccgcac atcacggacg
      961 agatcaaggc ccaactccag gccgtcggcg aaaaggagcg ggcggacatc gtcctcgtcg
     1021 aagtcggcgg gacggtcggc gacatcgagg gcatgccgtt cctcgaggcc gtccggcaac
     1081 tcgcccagga aattgggaaa gaaaacctcc tgttcgtgca cacgacattg gtgccggtca
     1141 tgggcgccgt cggtgagcag aagacgaagc ccacccagca gagcgtccgt gagctccgtt
     1201 caatggggat ccagcccaac gtgatcatcg cccgcggaga gcactccctc gagcccgaca
     1261 tcaagaagaa gatcgcgttc ttcaccgacg tccccgtcga aggcatcatc agcgccccgg
     1321 acgcctcgac gatctacgac gtgccgctcc tgttcgacgg ccaaggtctc acggaataca
     1381 tcgtgaagac gctccggctg aaaccgaagg acgaggacct gcgagaatgg aaggcgttcc
     1441 tcgagaacct gaagaatccg gacaaagaag tgacaatcgc cctcgtcggc aagtacacgc
     1501 acctgaagga ttcgtacatc agccacatcg aggcgttcca tcatgcgggc gcccatgcgc
     1561 gggtccacgt caagctgaag tgggtcgagt ccgtcgacct ggagaagcat gggaccaagc
     1621 tcctcgaagg cgcggacgga atcctcgtgc cgggcggatt cggagatcga gggatcgaag
     1681 ggaagatcgc cgcgacccga tacgccgcgg agcacgacat tccgttccaa ggcgtgtgcc
     1741 tcggattcca gctcgcgacg atcggcttcg cccgcgacgt cctcggcctg aagggggcga
     1801 acagtt
//
LOCUS       DATLMA010000010         1587 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_724427, whole genome shotgun sequence.
ACCESSION   DATLMA010000010 DATLMA010000000
VERSION     DATLMA010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724427"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..940
                     /locus_tag="VNA10_00125"
     CDS             179..940
                     /locus_tag="VNA10_00125"
                     /inference="COORDINATES: protein motif:HMM:NF034126.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex RNA-binding protein Csl4"
                     /protein_id="HVG36114.1"
                     /translation="MEAKMVLPGDEIAVAEEFEPGEGTYERNGLVFAATPGVLILDPE
                     NRVARVRAFNPPAELKVGDIVYGVVDDIRGMMATATVTAIHGRPRQISGESEGTIHIS
                     NVSEEYTEDIHDMYRLGDIIRAKVIQVKPSVQLTTAERNLGVVKALCSVCRGPLEVRG
                     RELYCPRDERTERRKLAADYADLKLTVPATELGGGKVEAKHREPREEGHDRGGRDRGR
                     GGGRDRFRDRGGGRGRDGQGPGGRGGRDRDRGRRR"
     gene            1070..1210
                     /locus_tag="VNA10_00130"
     CDS             1070..1210
                     /locus_tag="VNA10_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36115.1"
                     /translation="MKELARLRTEIQQLREVVSALFNAVFEEGDEDWDSVPEKDEFNL
                     YN"
     gene            complement(1287..>1587)
                     /locus_tag="VNA10_00135"
     CDS             complement(1287..>1587)
                     /locus_tag="VNA10_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36116.1"
                     /translation="KIPSASRRLAMGICLDSMVSTAPSAWLTMGNALDRLARDFTILT
                     ALGLILVAVSLLSWFRTGVLDLGFVLALAVLIALRDIGAFCRGAMERMRQLSQMV"
BASE COUNT          343 a          476 c          513 g          255 t
ORIGIN      
        1 attccggttc cgggaagatt accgaccggc tgccgtacgc ctttccgatt ccgcacacct
       61 tcgagttcca ccgcgaggag gttcggcgga ttgacgtcgt cctctaccga ttcgaagtgg
      121 cgaagggata aataccgacg ggcctactcc gtccggcccg aaggagtggt tgcaccgaat
      181 ggaagcgaag atggttctcc ccggcgacga gattgccgtc gcggaggaat tcgagcccgg
      241 cgaggggacg tacgagcgga acggactcgt ctttgcggcg acgcccggtg ttctcatcct
      301 cgacccggag aaccgcgtcg cgcgggtacg ggcattcaac ccgcccgcgg aactcaaggt
      361 cggggacatc gtgtacgggg tggtcgacga catccgcggg atgatggcaa ccgcgacggt
      421 taccgcgatc catggacgtc cccgccagat cagcggcgag tcagaaggga cgattcacat
      481 ctcgaacgtg tccgaagaat acaccgagga cattcacgac atgtaccgac tcggagacat
      541 cattcgcgcc aaggtgattc aagtcaaacc ttcggtgcag ctgacgacgg ccgaacggaa
      601 tctcggggtc gtgaaagccc tctgttccgt ctgccgcggg cccctcgagg tccgcggccg
      661 ggagctctat tgtccgcgcg acgagcggac ggagcggaga aaactcgctg ccgattacgc
      721 ggacctgaaa cttaccgtcc ccgcaaccga actcggtggc ggcaaggtcg aggcgaaaca
      781 tcgggagcct cgtgaggagg gacacgatcg cggcggccgg gatcgaggtc ggggcggcgg
      841 gcgcgatcga tttcgcgacc gcggcggcgg acgaggtcgt gacggacagg gtcccggagg
      901 tcgcggtgga agggatcggg atcgcggccg acgacggtga atcgtcgcaa gattccgtga
      961 ccgttccgtt ccgagaatta gcatcaagaa tcgaaggcaa aaagataaga acctaccctg
     1021 tgatagcagc ggttagaggt tctgaatgcc cgcttccaac gaggaagtga tgaaggagtt
     1081 ggcgcgcctc cggacggaga ttcaacagct ccgggaggtc gtcagcgccc tcttcaacgc
     1141 cgtcttcgag gaaggggacg aggactggga ctcggtcccc gagaaggacg aattcaacct
     1201 ctacaactga tccggacagc gatcaaagtc gagctttttc gcacgaagcg ggcgtccagc
     1261 ctgtcctttc ttccgggtct cggcgatcag accatctggc tcagttgccg cattcgctcc
     1321 atcgccccgc gacagaacgc gccgatgtcc cgcagggcga tgaggaccgc gagcgcgagg
     1381 acaaagccga gatccaacac gcctgtccga aaccacgaga gcaggctcac cgcgaccaag
     1441 atcaggccga gggccgtcaa aatcgtgaag tccctcgcga gccggtcgag tgcattcccc
     1501 attgtgagcc acgcagacgg tgcggtcgac accatcgaat ccaaacaaat ccccatcgcc
     1561 aagcggcgcg aggcggaagg aatcttc
//
LOCUS       DATLMA010000011         3323 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_483468, whole genome shotgun sequence.
ACCESSION   DATLMA010000011 DATLMA010000000
VERSION     DATLMA010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483468"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VNA10_00140"
     CDS             complement(<1..305)
                     /locus_tag="VNA10_00140"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG36117.1"
                     /translation="MTVLGIDTIAIVVSDPRKAIAWYRDVLGLDVAYIGPSEPNPDPS
                     VEGTAEDPGHWVELGPGRPRTRVHLCFMGGETEPGPAGITFITDDIQAEYERMRRAGV
                     "
     gene            complement(367..>3323)
                     /locus_tag="VNA10_00145"
     CDS             complement(367..>3323)
                     /locus_tag="VNA10_00145"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HVG36118.1"
                     /translation="SPFAHTVVLQGVSDLVLMEDRSALLRELHRKVLERVMPTDQISS
                     IQFQPAEIAEYFRKKLPKVARKEDVLSYLDRVGDANLLQQKGRTVFEVASASFAEVRK
                     WAGQLVDEGLVESVWTPQGIHWTPKDLLPTYVAVYAQRSRLKPPEDKALTLIKERPRT
                     HKELARLTKLEKDDLNEALRKLERAYLIGRRGVEETVYFARESQRANFEESLDKLLTK
                     RLEVDGPYSAQELAVALGLEPELVEEVLRDLESEGVVSSGHFLVDKEFQFMMTRDLQR
                     LQRKDETREVFDENQVKAFLLEKQFASIETLDGYFDRFLEAGMVLDIYNHTARFDYKE
                     WLRRREAGDILEGRFLNGRVRYIRAKDVPLFLSAFPRSPLSDFEKKVLDVIREGDGVD
                     LWAINAKVRAEREQVKEALDKLDYDVYVIRRFQGDGWTARNLYVAFDPPHSKVADAFE
                     TIVRRFLAAYGPVPFSGIREWARFEWDELERLLDRLEQDGVVTRILVTGKAESEMYVL
                     AEDLPALRKTAGKQATDPMRVLSLLDPWTQALWAQVASRYGEGWFFPLVKDGDLVGMA
                     EIWEMSGCIEVREMDLASPDQLDEAIAALTHMMGFYAMRGVDVLRVTRFQAKNVPEAE
                     DLSHWKRAGFIRFSDFLAHGPIVPRDFDPTDLLALALTKQGIAPESRFADPIAAAEAL
                     GGLRSDFAARLRVKEFRPLERLHRSGLLAKGLAIPEYWTYCTEADLSLYKAAKATRLT
                     KEMKATLRIIQEEGPISRQRLLILSDLSRPATTAALRKLYEGLHVTRDSDNRYRLVSD
                     VKISRDDARREVLRRIIRSLGVTSAEALAAYTRFEYNMGETRLRLREFEAEGWLVKGF
                     LARGERTVLWAVKDGLEQIGHADFHRKFVLTPLDNLFLYLREAIVDKFHMGSCYTVFD
                     GAEMVAAFKARRRKWELLVTEFQGEPAARRIVEAWEAENELAVEEQVDRISDHEVMEW
                     YAKMYGRGAAER"
BASE COUNT          552 a         1107 c         1052 g          612 t
ORIGIN      
        1 acgccggcgc gccgcatccg ttcgtactcc gcctggatgt catccgtgat gaacgtgatg
       61 cccgcgggcc cgggctcggt ttcgccgccc atgaaacaga ggtggacgcg ggtgcgaggg
      121 cgacccggtc ccagttccac ccaatgaccc gggtcctcgg ccgtcccctc gacggacggg
      181 tccgggttcg gctcgctcgg gccaatgtag gcgacgtcca ggcccaggac atcccgatac
      241 caagcaatcg cctttcgcgg atcagagacg acaatcgcaa ttgtgtcaat accgaggacg
      301 gtcatcggaa tcgggaccga atccgaagtt cgcggtatga agttgagcgt caggagaccg
      361 agagtgtcag cgttccgcgg cccctcgccc atacattttc gcgtaccact ccatgacctc
      421 gtggtccgag atccggtcga cttgttcctc gaccgcgagc tcgttctccg cctcccatgc
      481 ctcgacgatc cgccgggcgg cgggttcccc ctggaactcg gtgacgagga gctcccactt
      541 ccggcggcga gccttgaacg ccgccaccat ctcggccccg tcgaacacgg tgtagcagga
      601 ccccatgtgg aacttgtcga cgatcgcctc gcgcaagtag aggaacaggt tgtcgagcgg
      661 cgtgaggacg aacttccgat ggaaatccgc atgcccgatc tgttcgagac cgtccttcac
      721 ggcccatagc acggttcgct cgcccctcgc gaggaaccct ttgacgagcc atccttccgc
      781 ctcgaactcc cgcaaccgca agcgggtctc ccccatgttg tactcgaacc gcgtgtaggc
      841 cgcgagcgcc tccgccgatg tcaccccgag gcttcggatg atccgtcgga ggacttcccg
      901 acgggcgtca tcgcggctga tcttcacgtc ggagaccagg cggtaccggt tgtccgaatc
      961 tcgggtcaca tggaggcctt cgtacagctt gcgaagcgcc gctgtggtcg ccggccggct
     1021 caggtccgag agaatgagga gccgctggcg cgagatcggt ccctcttcct ggatgattcg
     1081 gagggtcgcc ttcatctcct tcgtgagccg cgtcgctttg gccgctttgt acaggctcag
     1141 atccgcttcg gtgcagtacg tccagtactc cggaatcgcc aagcctttgg cgagcagccc
     1201 gctccgatga agtcgttcga gagggcggaa ctccttcacg cggagccgcg cggcgaaatc
     1261 ggaccgcagc cctcccaggg cctcggccgc ggcgatcgga tcggcgaagc gggactcggg
     1321 ggcgattccc tgcttcgtca gcgcgagcgc gaggaggtcg gtcgggtcga agtcccgcgg
     1381 gacgatcgga ccgtgagcga ggaaatcgga gaaccggatg aagcccgcac gcttccagtg
     1441 ggacaagtcc tccgcctccg ggacgttctt cgcctggaat cgggtgacgc gcagcacgtc
     1501 gacaccgcgc atcgcgtaga accccatcat gtgggtgagc gcagcgatcg cctcgtccaa
     1561 ctgatccgga gaggcgaggt ccatctcgcg gacctcgatg catccgctca tctcccagat
     1621 ctcggccatc ccgacgaggt cgccgtcctt gaccaagggg aagaaccagc cttccccgta
     1681 gcgactggcg acctgggccc acagcgcttg cgtccacgga tcgaggaggg acaggacccg
     1741 catcggatcc gtggcctgtt tcccagcggt tttccggagc gctggcagat cctcggcgag
     1801 gacgtacatc tccgactccg ccttccccgt cacgaggatc cgcgtgacga cgccatcctg
     1861 ttccagacgg tccaggagcc gctcgagctc gtcccactcg aaccgcgccc actctcgaat
     1921 tcccgagaac ggcacggggc cgtacgccgc caggaatcgc cgcacgatcg tctcgaatgc
     1981 gtccgccacc ttcgaatggg gcggatcgaa tgcgacgtac aggttgcggg cggtccatcc
     2041 gtctccttgg aagcggcgga tcacgtagac gtcgtagtcg agcttgtcca gggcctcctt
     2101 gacctgctcc cgttccgctc ggaccttcgc gttgatcgcc cagaggtcca ccccgtcccc
     2161 ttcccgaatc acgtcgagga ctttcttctc gaagtcgctg agggggctcc gcgggaaggc
     2221 ggagaggaag agcggcacgt ccttcgcgcg gatgtaccgt acgcgtccgt tcaggaagcg
     2281 gccctcgagg atgtcgccgg cctcccgccg ccgcagccat tccttgtagt cgaaacgggc
     2341 cgtgtgattg tagatgtcga ggaccatgcc ggcctcgagg aagcggtcga agtagccgtc
     2401 gagggtctcg atgctcgcga actgcttctc gaggaggaac gccttcacct gattctcgtc
     2461 gaacacctcg cgcgtctcgt ccttccgctg gaggcgctgg aggtcgcggg tcatcatgaa
     2521 ctggaattct ttgtcgacga ggaagtgccc agaggagacg acgccctccg actccaggtc
     2581 ccgcaggact tcctcgacga gctccggctc caggcccagg gcgacggcga gctcctgcgc
     2641 gctgtacggt ccgtcaacct cgagccgctt cgtgaggagc ttgtccaagg actcctcgaa
     2701 gttcgcccgc tgcgattcgc gcgcgaagta gaccgtctcc tcgacccctc gccgaccgat
     2761 caggtacgcg cgctcgagct tgcgcaacgc ctcattcagg tcgtccttct ccagtttggt
     2821 gaggcgtgcg agttccttgt gagtccgcgg tctctccttg atcagcgtga gcgctttgtc
     2881 ctcggggggc ttgagtcgag aacgctgcgc gtagaccgcg acgtaggtgg gcaggagatc
     2941 cttcggcgtc cagtggatgc cttgcggagt ccacacgctc tcgacgaggc cctcgtccac
     3001 gagctgcccg gcccacttcc tcacctcggc gaaggacgcg gacgcgacct cgaagaccgt
     3061 gcgtcccttc tgttggagga ggttggcgtc gcccacgcga tcgagatagg acaggacgtc
     3121 ctccttgcgc gcgacttttg gtagcttctt ccggaagtac tccgcgatct cggcgggttg
     3181 gaattggatc gagctgatct ggtccgtcgg catgacgcgc tcgaggacct tgcggtggag
     3241 ctcccgcagc agcgcggatc ggtcctccat gaggacgagg tcggagacgc cctggagcac
     3301 cacggtgtgg gcgaacgggg acg
//
LOCUS       DATLMA010000012         1001 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_122002, whole genome shotgun sequence.
ACCESSION   DATLMA010000012 DATLMA010000000
VERSION     DATLMA010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122002"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..648)
                     /locus_tag="VNA10_00150"
     CDS             complement(<1..648)
                     /locus_tag="VNA10_00150"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HVG36119.1"
                     /translation="MDRAQRVYQRLLQHYGPQHWWPAETAFEAIVGALIMQQTSWRNV
                     EVAIRNLRRAGLLDIRALAETPVPVIRRHVRIAGLYRTKPARVRAFCRHLLDRSDGDL
                     ARYFGRPTDVVRADLLAQDGVGPETADSILLYAGRHPVFVVDAYTERIGSRIGLFRTG
                     EYPAIQRFFEGHVPRDLATYQEYHALLVRHAKTLCTRTNPACAVCPIQSLCDFGRR"
     gene            731..>1001
                     /locus_tag="VNA10_00155"
     CDS             731..>1001
                     /locus_tag="VNA10_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36120.1"
                     /translation="MNPVPMFASIGGVDELLFRALNLAGTNATLDLVMVLITTLGGTY
                     ILALFAIPLWLRGQREATFDFVLILVLTVVVTTAIKYLVDRSRPCV"
BASE COUNT          166 a          322 c          330 g          183 t
ORIGIN      
        1 tcgacggccg aagtcgcaga gggattggat cggacatacc gcgcacgcgg gattcgtccg
       61 ggtacagagc gtcttcgcgt gccgaaccag gagtgcgtgg tactcctgat acgtcgcgag
      121 gtctcgcgga acgtgcccct cgaagaatcg ttggatcgcc gggtattcgc cggtccggaa
      181 gagcccgatc cgactgccga tgcgctccgt gtaggcatcg acgacgaaga ccgggtgtct
      241 gccggcgtag aggaggatcg agtccgcggt ctccggcccg acgccatcct gagccagaag
      301 atccgcgcgc accacgtccg taggacggcc gaagtaacgc gccaggtcgc cgtcggatcg
      361 gtcgaggaga tgacgacaga acgcacggac ccgcgcgggt ttggtgcggt agaggcccgc
      421 gatccgcaca tgtctccgga tgacaggcac gggcgtctcg gccaacgctc ggatatcgag
      481 gagtcctgcc ctccggaggt tccggatcgc gacctcgacg ttccgccacg aggtctgctg
      541 catgatcagc gcgccgacga tcgcttcgaa ggcggtctcg gcgggccacc agtgctgcgg
      601 cccgtaatgc tggaggagcc gctggtagac tcgttgggcg cgatccatct cacggccgcc
      661 atcacgattg aaggtttgag ggttgtccgt ggtgtcacgg atttaaagga cctcccgcca
      721 tccggggcgc gtgaacccgg tcccgatgtt cgcctcgatc gggggcgtcg acgagctcct
      781 cttccgggcg ctgaacctcg ccggcacgaa cgcaaccttg gacctcgtca tggtcctcat
      841 cacgacgctc ggtggcacgt acatcctcgc tctcttcgcg atccctctct ggttgcgagg
      901 tcagcgggag gcgacgttcg atttcgtcct catccttgtc ctcacagtcg tcgtgacgac
      961 ggccataaag tacctcgtgg accgctcgcg gccctgcgtc g
//
LOCUS       DATLMA010000013         1641 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_664708, whole genome shotgun sequence.
ACCESSION   DATLMA010000013 DATLMA010000000
VERSION     DATLMA010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664708"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1612)
                     /locus_tag="VNA10_00160"
     CDS             complement(<1..1612)
                     /locus_tag="VNA10_00160"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HVG36121.1"
                     /translation="MPESEYEVELFRKQGFTRQTCSKCNTPFWSLGIHDTCGEAPCQE
                     YDFIGASPFKKKLTYRAMREDFLSFLEQNGHTRVKRYPIVARWRDDVFFVQASVYPFQ
                     PWVISGEASPPANPLALSQPCVRFLDIDNVGKTGQHFTMFEMMAHHAFNFPKKFIYFK
                     DRTVEICHLFLTERLGVDPALVRYKESWWEGGGNSGPCFEVVFGGAEPATLVFMMNRE
                     VNGHRIPMETQVVDTGYGLERLTWLSQATTSAYEAVFGEALAYLKRATGAKRVDDRVL
                     REYSKVAGMLKVETLADIREIRQQTAARVGISVDELVAQVSPLESLYTVCDHSRALIF
                     ILGDGVVPSNSREGYFARLLVRRGLRALKDLNITYSLADTVSFMIDQIREDYPEFFFN
                     KGDILKLLKVEESRYKETLEKGRVTVGKIATELTAAGKGFDVETLLELYDSHGLNPDV
                     VQEFTDLPIEIPDDFYRQVAARHERPVAEPEKRFTIQKELPPTKLRVYEDRRRRSFRA
                     KVVAVEGEAVVLDQTFFYPEGGGQEADHG"
BASE COUNT          283 a          529 c          511 g          318 t
ORIGIN      
        1 tcccgtggtc ggcctcctga cctccgccct ccggatagaa gaacgtctga tcgaggacga
       61 cggcctcgcc ctcgaccgcg acgactttcg cccggaacga gcgccggcgg cggtcctcgt
      121 acacacgaag cttcgtcggc gggagttcct tctggatcgt gaatcgcttc tccggctcgg
      181 caaccggacg ttcgtgtcgc gccgccacct gtcggtagaa gtcatccggg atttcgatcg
      241 gcaagtccgt gaattcctgg acgacgtccg gattgagtcc gtggctgtcg tagagctcca
      301 ggagcgtttc gacgtcgaat cccttgccgg cggccgtgag ctcggtggcg atcttcccga
      361 cggtcacccg ccccttctcg agcgtctcct tgtaccggga ctcctcaacc ttgagcagct
      421 tcaggatgtc ccccttgttg aagaagaatt ccggatagtc ctcgcggatc tggtcgatca
      481 tgaaggagac cgtgtcggcc aagctgtacg tgatgttcag gtccttgagc gcccggagtc
      541 cccgccggac caggaggcgc gcgaaatagc cctcccggct gttcgacggc acgacgccgt
      601 ctccgagaat gaagatcaac gcccgcgaat ggtcgcaaac cgtgtacagc gactcgaggg
      661 gcgaaacctg cgcaacgagt tcgtcgaccg agatcccgac gcgcgccgcc gtctgctgtc
      721 gaatctcgcg gatgtccgcc agcgtctcga ccttgagcat gccggcgacc ttcgagtatt
      781 cccggaggac gcggtcgtcg acgcgcttgg ctccggtcgc acgcttcagg tacgcgagcg
      841 cctcgccgaa cacggcttcg tacgcggatg tcgtcgcctg cgagagccac gtcagtcgct
      901 cgaggccgta tcccgtgtcc acgacctggg tctccatcgg gatgcggtgg ccgttgactt
      961 cccggttcat catgaacacc agggtcgccg gttcggcgcc gccgaagacg acctcgaagc
     1021 atgggccgct gttgccgcct ccctcccacc acgactcctt gtagcggacg agcgccgggt
     1081 cgacgccgag ccgctcggtc aggaagagat ggcagatctc gaccgtccgg tccttgaagt
     1141 aaatgaattt cttggggaag ttgaacgcat ggtgggccat catctcgaac atcgtgaagt
     1201 gctgcccggt cttcccgacg ttgtcgatgt ccaagaatcg cacgcacggt tggctgagcg
     1261 ccaacgggtt cgcgggcggg ctcgcctcgc cgctgatgac ccagggctgg aacggataca
     1321 cgctggcctg gacgaagaag acgtcatcgc gccagcgcgc gacgatcggg tagcgcttca
     1381 cgcgcgtgtg accgttctgc tcgaggaacg agaggaaatc ctcgcgcatc gcgcggtagg
     1441 tgagcttctt cttgaaaggc gacgcgccga tgaagtcgta ctcttggcag ggcgcctccc
     1501 cgcacgtgtc atggatgccg agggaccaga acggcgtgtt gcacttcgaa cacgtctggc
     1561 gggtgaaccc ttgctttcga aacagctcga cctcgtattc actctcgggc attttcggcc
     1621 tccgaacgaa cggcgacctt t
//
LOCUS       DATLMA010000014         2596 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_122349, whole genome shotgun sequence.
ACCESSION   DATLMA010000014 DATLMA010000000
VERSION     DATLMA010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122349"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VNA10_00165"
     CDS             complement(<1..657)
                     /locus_tag="VNA10_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HVG36122.1"
                     /translation="MDANSVRARLHEDLDRLRSAEGYLRAGAPRYATLFGRDSLITAW
                     QSLSFDPSIAAATLRVLATFQGRTVNTKSEEQPGKILHEHRFDAGSRAELPDWDFPYY
                     GSVDSTLLFLIVASEYARTTDDARLVTDLWPALLAAHRWIGAYGDIDGDGFVEYDRKN
                     PYGLFHQGWKDGSEDHLSIDPPVAVVEVQGYAYAAHRAFASLAEGVGDAEIARSSEAA
                     S"
     gene            complement(673..1788)
                     /locus_tag="VNA10_00170"
     CDS             complement(673..1788)
                     /locus_tag="VNA10_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011013073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36123.1"
                     /translation="MARVKLKGLSKAYDGAPAVTGLDLEVQDKEFVVLLGPSGCGKTT
                     TLRCVAGLESADEGEIYIGDRLVNDLDPKDRNVAMVFQSYALYPHMTVYQNMAFPLEN
                     AKVAEREIIASVNRVAKLLQIETLLGRKPSQLSGGQRQRVAVGRAIVREPQVFLMDEP
                     LSNLDAQLRVHMRAELKKLQKVLGVTTIYVTHDQVEAMTMADRVALLHKGVLQQYDAP
                     QTLYNRPTNSFTASFVGSPPIDLVECDLADGNVLDAGSFRIPVPDRFLEPLKHTASEK
                     LVLGIRPQDLRVNPTPPTEADGVVVYRFPSTSVPAEIYTTEPLGDSTILDLKVGETLL
                     KAVVGSTFAGDTGSKVELHFPPDRIHLFERGSGHAIR"
     gene            1869..>2596
                     /locus_tag="VNA10_00175"
     CDS             1869..>2596
                     /locus_tag="VNA10_00175"
                     /inference="COORDINATES: protein motif:HMM:NF045333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 1"
                     /protein_id="HVG36124.1"
                     /translation="MEEVRVTEKRLSDYRAIIGGPAFAEILALASKLKGKRVAHVNAT
                     GYGGGVAELLHSLVPLQRDVGLDVHWFVLDGSNAFFTATKTMHNALQGSDVGLTPDME
                     ANYRHFNELNAASFQDEYDYVIIHDPQPAPFATLCERKGRWIWRCHIDLTSPNPSVLR
                     LLAPYLEAYDAAVFSAREYAPPTVQFPRIYVNPPAIDPTSPKNRHVYREELETILPRF
                     DVDFDRPVISQVGRFDPWKDPLGV"
BASE COUNT          454 a          834 c          834 g          474 t
ORIGIN      
        1 cgacgcagct tcggaggagc gggcgatctc tgcatcaccg actccttccg ccagcgaggc
       61 gaacgcgcgg tgcgcggcgt aggcgtatcc ttggacctcg accaccgcga ccggaggatc
      121 gatgctcagg tgatcctccg agccgtcctt ccatccctgg tggaacagcc cgtatggatt
      181 cttccggtcg tactcgacga atccatcccc gtcgatgtcg ccgtaggccc caatccagcg
      241 atgcgccgcg agaagcgccg gccaaaggtc ggtgacgagc cgcgcgtcat ccgtcgtgcg
      301 cgcgtactcc gaggcgacga tgaggaacag gagagtcgag tcgacgctcc cgtagtacgg
      361 gaaatcccag tcgggcagtt cggctctcga ccccgcatcg aagcgatgct cgtgcaggat
      421 tttcccgggt tgctcctccg atttcgtgtt tacggtccgt ccctgaaacg tcgcgaggac
      481 gcgcagtgtg gcggccgcaa tcgacgggtc gaacgagagg ctctgccacg cggtgatcaa
      541 cgagtcgcgg ccgaacaacg tcgcataccg gggcgcgcct gcccgaagat agccctcggc
      601 cgaccggagt cgatccaggt cctcgtgcaa tcgcgcacga accgagttcg cgtccaccgc
      661 accgccgacc cgttaccgga tcgcgtgtcc cgaaccgcgt tcgaataagt gaatccgatc
      721 cggagggaag tgcagctcga ccttcgagcc ggtgtcgccc gcgaaggtcg accccacgac
      781 ggccttcagg agcgtctccc caaccttcag gtcgaggatc gtcgagtccc cgagcggttc
      841 ggtggtgtaa atctccgcgg ggaccgacgt cgacgggaaa cggtagacga ccaccccgtc
      901 cgcctccgtg ggaggtgtcg gatttacgcg gaggtcctgt ggacggattc cgaggacgag
      961 cttctccgat gcggtgtgtt tgagcggttc caagaatcgg tcggggaccg ggatgcggaa
     1021 gctgcccgca tcgaggacat ttccgtcggc caagtcgcac tcgacgaggt cgatcggtgg
     1081 gctcccgacg aagcttgcgg tgaacgagtt cgtcggacga ttgtacaggg tctgcggggc
     1141 gtcgtactgc tggagcacgc ccttgtggag gagcgcgacg cggtctgcca tggtcatcgc
     1201 ttcgacctgg tcgtgggtca cgtagatcgt cgtcaccccg aggaccttct gtagtttttt
     1261 caactccgcc cgcatgtgga cgcggagttg cgcgtcgaga ttgctcagcg gctcgtccat
     1321 gaggaagacc tgcggctcgc ggacgatcgc acggccgacc gcgacccgct gcctctggcc
     1381 accactgagc tggctgggct tgcgcccgag gagggtctcg atctggagga gcttcgcgac
     1441 tcggttcacg gacgcgatga tttcgcgctc cgcgaccttc gcattctcga gggggaaggc
     1501 catattctgg tagaccgtca tgtgcgggta cagcgcgtag ctctggaaca ccatcgcgac
     1561 gttgcggtcc ttcggatcga ggtcgttcac gaggcggtcg ccgatgtaga tctcgccttc
     1621 gtccgccgac tcgaggcctg cgacgcaccg caaggtcgtc gtcttgccgc atccgctcgg
     1681 tccgaggagg acgacgaact ctttgtcctg gacctcgagg tcgagtcccg tgacggcggg
     1741 ggcgccgtcg taggctttcg agagcccttt caacttgaca cgggccaagg agacgttgga
     1801 cggggaagaa cggataaata atcttcgctt acgggtccct gtcgcggtct cggagcgtac
     1861 ggatttccat ggaagaagtt cgcgtcacgg agaaacgtct gtccgattac cgcgcaatca
     1921 tcggagggcc cgcgttcgcg gagatcctcg ccctggcgag caagctgaaa ggaaagcgcg
     1981 tcgcccacgt caatgcgacc ggatatggcg ggggcgtcgc cgagctgctg cacagcctcg
     2041 tgccgctgca gcgggatgtc ggcctcgacg tgcactggtt cgtcctcgac ggatcgaacg
     2101 cgttcttcac cgcgacgaag acgatgcaca acgcgctcca gggctccgac gtgggcctga
     2161 ccccggacat ggaggccaat taccgccatt tcaacgagtt gaacgccgcg agcttccagg
     2221 acgagtacga ctacgtcatc atccacgatc cccaaccggc cccgttcgcg acgctgtgcg
     2281 agcggaaagg ccgttggatc tggcgctgcc acatcgacct gacgtccccg aacccgtccg
     2341 tcctgcggct cctcgcgcct tacctggaag cctatgacgc cgccgtcttc agcgcccgcg
     2401 agtacgcccc gcccacggtc caattcccgc ggatctacgt gaatccgccc gcgatcgatc
     2461 cgacgagccc gaagaaccgc cacgtgtacc gggaggagtt ggagacaatc ttgcctcggt
     2521 tcgacgtcga tttcgaccga cccgtgatca gtcaggtcgg ccggttcgat ccatggaagg
     2581 atccgctcgg cgtcat
//
LOCUS       DATLMA010000015         3475 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_605837, whole genome shotgun sequence.
ACCESSION   DATLMA010000015 DATLMA010000000
VERSION     DATLMA010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605837"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1788
                     /locus_tag="VNA10_00180"
     CDS             <1..1788
                     /locus_tag="VNA10_00180"
                     /inference="COORDINATES: protein motif:HMM:NF021370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2070 family protein"
                     /protein_id="HVG36125.1"
                     /translation="AETTRMARRLFVSPPAKRMVLPILVFSLMESFLLIYPSLDGWRV
                     GWGAVAIAVPAYIAAYATVPLAERLGGRMNFRRSFLLVFVSLIMVGAIELAVVAALTL
                     YSVLGTTTYAFRIDRAVVLGYGAVLWIRAVILTATSNSKYVRTLPAASLHPVLGYIGL
                     AVFVHLGVWDIVLALAVYALFFLSAVAYTEIAKRPLLRSFGADGLKLLRSTLDQYGEQ
                     EESGIAELESFFDSISVRARVRVAGLAFRTAKGIKAILLAPAVHPGPMGFVSGSDLPS
                     KIARGLTDLTPNVLVAHGPTTHDENPATSAEVKKVSEAVREMVAAAAFGSKVGSARRV
                     TYARASALAQAFGDVVMIVASFAPNPTDDIDSATGHAAVQEARLVGAQDAIFVDAHNC
                     HEPGVGLTLFGSERSHEIIEAAKAATQAALKAPKDRARVGYAARRGFATPDQGIGARG
                     IEALVVETGGVRTAYVLFDGNNMVPGIRDEIRLRLAGLVQESEAMTSDNHSVNLSMDG
                     FNAVGAALDQQTILAQAEGAVREAMANLEEAEVAAFASEIANFRIFGPQSASRLTTSI
                     NSTMAVLRPALYVTLSGAIALGALVIVLF"
     gene            complement(1785..2378)
                     /gene="pdxT"
                     /locus_tag="VNA10_00185"
     CDS             complement(1785..2378)
                     /gene="pdxT"
                     /locus_tag="VNA10_00185"
                     /EC_number="3.5.1.2"
                     /EC_number="4.3.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HVG36126.1"
                     /translation="MRIGVIGVQGDVSEHVDAVARAMKDYGKEGEAIAVRRPMDLARV
                     DGLTIPGGESTTISKLLVKLGLFDEIVRRASEEGMPIMGTCAGCILLSKDAGSQAEKT
                     KTRLLGLMDMAVDRNAFGRQRESFEADLEVTGLDSPFHCVFIRAPAILRTWGGCTPSS
                     RYKDRIVLARQGHLIASAFHPELSGDLRIHRWFLDLV"
     gene            complement(2452..2925)
                     /locus_tag="VNA10_00190"
     CDS             complement(2452..2925)
                     /locus_tag="VNA10_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36127.1"
                     /translation="MQRKRGAPGNPAPTFPVETLRHWYVTPFGGMSVELEPFQVGINR
                     EALETNTSLDPSTDRVRVTVLGRVRRPLLLDRFFEVVPLDERHPEALQRSPMGEAVFP
                     EGDDVFRPRESPHAGDDVVISSVASQRLGLLDSDAFAEILQELFRTHRDPEHENS"
     gene            3094..3309
                     /locus_tag="VNA10_00195"
     CDS             3094..3309
                     /locus_tag="VNA10_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HVG36128.1"
                     /translation="MIDIEPTREKEVYQKLLKIKDIVELYPLFGEYDLIAKVEADSYD
                     AIGKVVVSKIRSIAGVKATKTLARVAF"
BASE COUNT          603 a         1144 c         1126 g          602 t
ORIGIN      
        1 gcggagacga cgcgcatggc ccgtcggctg ttcgtctccc cgccggcgaa acgcatggtg
       61 ttgccgatcc tcgtcttctc gctgatggaa tcgttcctcc tcatctatcc gtcgctcgac
      121 ggatggcggg tcgggtgggg agccgtcgcg atcgccgtcc cggcgtacat cgcggcctac
      181 gcgacggtcc cgctcgcgga acgcttgggc ggtcgcatga atttccggcg ctcgttcctc
      241 ctcgtcttcg tcagcctgat catggtgggt gcgatcgaac tggccgtcgt cgccgccctc
      301 accctgtact cagtcctcgg gacgacgacg tacgcgtttc ggatcgaccg cgccgtggtc
      361 ctcgggtacg gggcggtcct ctggatccgc gcggtcatct tgaccgccac gtcgaactcg
      421 aagtacgttc ggaccctccc ggccgcgtcc ctccacccgg tcctcggcta tatcgggctc
      481 gcggtcttcg tccacctggg cgtctgggac atcgtcctgg cgctcgcggt gtacgccctg
      541 ttcttcctga gcgcggtcgc gtacacggag atcgcgaagc gcccgctcct ccggtccttc
      601 ggcgcggacg gcctcaagct cctgcgctcg acgctcgacc agtacggcga gcaggaggaa
      661 tccggcatcg cggagctcga gtcgttcttc gattcgatca gtgtgcgcgc gcgcgtccgc
      721 gtggccgggc tcgccttccg aaccgcgaag ggaatcaagg cgatcctcct cgcgccggcc
      781 gtgcacccgg gcccgatggg attcgtcagc gggagcgatc tcccgtcgaa aatcgcgcgg
      841 ggcctcacgg acctgacgcc gaacgtactg gtggcccacg gccccacgac ccacgacgag
      901 aaccccgcga cgagcgcgga ggtgaagaag gtctccgagg ccgtccgcga gatggtcgcg
      961 gccgccgcct tcggctcgaa ggtcggaagt gcgcgccgag tcacgtacgc gagggcgagt
     1021 gctctcgcgc aggccttcgg agatgtcgtg atgatcgtcg cttcgttcgc gccgaacccg
     1081 acggacgaca tcgacagcgc gaccggccac gccgccgtcc aggaggcgcg actcgtggga
     1141 gctcaggatg cgatcttcgt cgacgcacac aactgccacg aaccgggcgt cggcctcacg
     1201 ctctttggaa gcgagcgcag tcacgagatt atcgaggcgg cgaaggcggc cacccaagcg
     1261 gccctcaagg cgcccaaaga ccgagcgcgg gtgggctacg ccgcccgacg cggcttcgcg
     1321 acgccggacc aaggcatcgg cgcgcgcggc atcgaggccc tcgtggtcga gacgggcggc
     1381 gtgcggacgg cctacgtcct cttcgacggg aacaacatgg tcccggggat tcgagacgag
     1441 atccgattgc gcctcgccgg actcgtccag gagtccgagg cgatgacgag cgacaatcac
     1501 tccgtgaatc tgtcgatgga cggattcaat gcggtcggcg cggctctcga tcaacaaacg
     1561 attctcgcgc aagcggaagg ggcggtccga gaggccatgg cgaacctcga ggaagcggag
     1621 gtggcggcat tcgcgagcga gatcgcaaac ttccggatct tcggaccgca gtccgcgtcc
     1681 cgcttgacga cgtcgatcaa ttcgacgatg gcggtcctcc gtcccgcgtt gtacgtcacg
     1741 ctcagcggcg cgatcgccct gggcgcactc gtcatcgtgc tgttctagac gagatccaag
     1801 aaccaccgat ggatccgcag gtctccgctc aactccggat ggaatgcgga cgcgatcaga
     1861 tgtccttggc gggccaggac gattcggtcc ttgtaccgcg agctgggcgt gcatcccccc
     1921 caggtccgga ggattgccgg tgcgcggatg aagacgcagt ggaacgggga gtcgagtccg
     1981 gtgacctcga ggtcggcctc gaacgactcg cgctggcggc cgaacgcgtt gcgatccacg
     2041 gccatgtcca tgagcccaag gagccgagtc ttcgtcttct ccgcctggct ccccgcgtcc
     2101 ttcgagagga ggatgcaccc ggcgcacgtg cccatgatgg gcattccctc ttcactcgcg
     2161 cggcgcacga tctcgtcgaa gagcccgagc ttcacgagca gctttgaaat agtcgtgctt
     2221 tccccgccgg gaatcgtgag gccatcgacg cgcgcaagat ccattggccg gcggaccgcg
     2281 atcgcctcgc cctccttgcc gtaatccttc atcgcccggg cgactgcatc gacgtgttcg
     2341 ctcacgtcgc cttggacgcc gatgacgcca atccgcattc aatggaccta cggcggcgtc
     2401 cgataaaaac catttcgact cggattcccg atcgacgcgg cgggcaccgg ttcagctgtt
     2461 ctcatgttca gggtcgcgat gggtccggaa cagttcctgc aggatctccg cgaacgcatc
     2521 ggaatcgagg agcccgaggc gctggcttgc gacgctgctg atgacgacgt catcgccggc
     2581 gtggggcgac tcccgcgggc gaaacacgtc gtcgccttcg gggaagaccg cctcacccat
     2641 gggggaccgc tgcagcgctt ccggatggcg ttcgtccaga gggacgacct cgaagaatcg
     2701 atcgaggaga aggggccgcc gcacacggcc gagcaccgta acgcggacgc gatcggtcga
     2761 cggatcgagc gaggtgttcg tctcgagggc ctcgcggttg attccgacct ggaatggctc
     2821 cagctcgacg gacatgccgc cgaacggcgt cacgtaccag tgtcgcagcg tctcgaccgg
     2881 gaaggtgggc gcggggtttc cgggcgcacc gcgtttgcgc tgcaccgatg aaaaatcgtc
     2941 cacgccggta tttgtaatct gagtctcgaa aatccgactt gagagcactt cgtcaacgcg
     3001 ttgtccttcc atcgaaaccg cgctcgatac ccttatctac gacacggatg tacgcagaaa
     3061 tcaagaggga ctttcacggc catcggattc gtcttgatcg acatcgaacc gacgcgcgag
     3121 aaggaagtct accagaagct cctgaagatc aaggacatcg tcgagctcta tccgctcttc
     3181 ggggaatatg acctgatcgc gaaggtcgaa gccgattcgt acgacgcgat cgggaaggtg
     3241 gtcgtctcga agattcgctc gatcgcaggc gtgaaggcga cgaagacgct cgcccgcgtg
     3301 gctttctgac cgcgtctctc agcggaagcg aagccggtca cttgcccccc gcagaccccg
     3361 tgcggtggcg ggcaatggtc cggtccaccc agccctgatc gccccagagc gcacgatacg
     3421 cgaggatcgc gaagataccg acgacgagca tcgcgagtac tgcgaagagg atcac
//
LOCUS       DATLMA010000016         2311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_664989, whole genome shotgun sequence.
ACCESSION   DATLMA010000016 DATLMA010000000
VERSION     DATLMA010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664989"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VNA10_00200"
     CDS             <1..525
                     /locus_tag="VNA10_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36129.1"
                     /translation="PSKKALPKKMEATVKRVPPKVFVTPPPPPVELLPPAPEPNIEEV
                     FVIGSNSLLVKHMSRSLMSDKDRDVVGSMISAISSFVREAFTERDGEVHEVTLGDHRF
                     VMCNDSGIVLAVLVSSGDTEDIVHRLRHLLAILRDRYGDRLATWQGEPLEGIEDELQV
                     LWQPYHIPPPPPVA"
     gene            643..1296
                     /locus_tag="VNA10_00205"
     CDS             643..1296
                     /locus_tag="VNA10_00205"
                     /inference="COORDINATES: protein motif:HMM:NF018242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase"
                     /protein_id="HVG36130.1"
                     /translation="MERAIVLLSGGVDSAVALWWAKRKGWDIRPLTFDYFGRPKREND
                     AVRALSSRAETASVRHVDLPFLKEVDDLRKEGFENRLLLDSPEGYIPGRNLIFYGLAG
                     YYAELDAARYLVGGHNGVDPESFPDSSPKFFNFLNSVFHLSLWSYDKAPVQILVPLSG
                     KSKEEVVRMGLEMNVPFDVTWSCYWDRTIHCGTCVSCRERREAFAAVGAADPVEYEA"
     gene            1357..1692
                     /locus_tag="VNA10_00210"
     CDS             1357..1692
                     /locus_tag="VNA10_00210"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HVG36131.1"
                     /translation="MYTTTVRSVAAIRFLEEGSHNVKMKQLIGHEDGARKTAMHELII
                     SKGGYSAPHRHEWDHQLVVTEGRGVAIISGKKLALRPGVVLLVQTNEEHQFLQRGREP
                     LKFVTVTPI"
     gene            1740..2066
                     /locus_tag="VNA10_00215"
     CDS             1740..2066
                     /locus_tag="VNA10_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012899449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-pyruvoyl tetrahydropterin synthase family
                     protein"
                     /protein_id="HVG36132.1"
                     /translation="MKLGVTEYIDCAHHLPGHERCGSLHGHTYQVDVFIEGDHKGGML
                     LDFADLKKNLRSVLADYDHKDWNTFLEYPTVENICELITKRLNERIKFPLHVRVWEGY
                     GKWAEI"
     gene            2090..>2311
                     /locus_tag="VNA10_00220"
     CDS             2090..>2311
                     /locus_tag="VNA10_00220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36133.1"
                     /translation="MSVPMSDLIDAIEAESRGDFAAALPHYEKLTASGSPLDCVGIYQ
                     ALARCNEKLGRLKDAGAWRQKAGQGYLALN"
BASE COUNT          450 a          730 c          717 g          414 t
ORIGIN      
        1 ccttcgaaga aggcccttcc gaagaagatg gaggcgaccg tgaagcgcgt cccgccgaag
       61 gttttcgtca cgcccccgcc accgccggtg gagctcctcc caccagcccc ggaacccaac
      121 atcgaggaag tgttcgtgat cggctcgaat agcctgttgg tcaaacacat gtcgcggagc
      181 ttgatgagcg acaaagatcg cgatgtcgtc gggagcatga tttccgccat ctcgtcgttc
      241 gtgcgcgagg cattcacgga acgagacggg gaggtccatg aggtgacgct gggggaccac
      301 cgcttcgtca tgtgcaacga ttccggaatc gtcctcgcgg tcctcgtctc gtccggggac
      361 acggaagaca tcgtgcaccg cctgcgccat ctccttgcga tcctgcgtga tcgatacggc
      421 gaccgccttg caacctggca gggggagcct ctcgagggaa tcgaggacga acttcaggtc
      481 ctctggcagc cgtaccacat cccgcctccg ccacccgtgg cctgagcggc tttccagcgc
      541 tccatcccgc gagtctggga cagatattta tggggcggaa gcctccgctt cgcggcctgc
      601 gctgcaaacc gacgtgcggc caaacgattt ggcggtaacc gaatggaacg ggcgattgtc
      661 ctcttgtccg gcggcgtcga ttcggcggtc gccttgtggt gggcgaagag gaagggctgg
      721 gacattcgac cgctgacctt cgactacttc ggtcgcccca aacgagagaa cgacgcggtc
      781 cgagcgttga gctcgcgggc cgagaccgcc tcggttcgac acgtcgacct gccgttcctg
      841 aaggaggtcg acgatctccg gaaggagggc ttcgaaaacc gcctcctcct cgactcgccc
      901 gaggggtaca tcccgggacg gaacctgatt ttctacggtc tcgcgggcta ctatgcggaa
      961 ctcgatgccg cgcgatacct cgttggcggc cacaacggtg tcgaccccga atcgttcccc
     1021 gactcgagcc cgaagttctt caatttcctg aacagcgtgt tccacctcag cctctggtcc
     1081 tacgacaagg ctcccgtgca gatcctcgtg ccgctgagtg gaaagtcgaa agaggaggtc
     1141 gtccgcatgg gcctcgaaat gaacgtcccc ttcgatgtca cgtggtcctg ttactgggac
     1201 cgcacgatcc attgcggcac ctgtgtctcc tgccgggagc gccgggaggc cttcgccgcc
     1261 gttggtgccg cggacccggt cgagtacgaa gcgtaacgaa cacgaagttg gggcgcgcaa
     1321 atcttaagga ggcgggggga ttccccgagg cccgacatgt acacgaccac cgtccggtcg
     1381 gtcgccgcga tccgattctt ggaggaaggc agccacaacg tgaagatgaa gcagctcatc
     1441 ggtcatgagg acggggcccg caagaccgcg atgcacgagc tcatcatctc caagggcggg
     1501 tattccgctc cgcaccgcca cgagtgggac catcaactcg tcgtcacgga agggcgaggg
     1561 gtcgcgatca tcagcgggaa gaaactcgcg ctgcgacccg gggtcgtgtt gctcgtccaa
     1621 acgaatgaag aacaccagtt tctccaacga ggccgagagc ccctgaagtt cgtcaccgtg
     1681 acgccgatct agcgtgccag gccaagcttt atggccgccc ggaccttggt ccggaatcga
     1741 tgaagctcgg ggtcaccgag tacatcgact gcgcgcatca cctgccgggc cacgagcggt
     1801 gcggttccct ccatgggcac acctaccagg tcgacgtatt catcgaagga gatcacaagg
     1861 gcggcatgct cctcgacttc gccgacctca agaagaacct gcgatccgtc ctcgcggact
     1921 acgaccacaa ggattggaac acgttcctcg agtacccgac cgtcgagaac atctgcgagc
     1981 tcatcacgaa acggctgaac gaacgaatca aattccccct gcacgtccgg gtctgggaag
     2041 gctacggcaa gtgggcggag atctgaggga ctctggtctc tcgcgcgagg tgtctgttcc
     2101 gatgtccgat ctgatcgatg cgatcgaggc cgaatcgcgc ggggactttg cggccgccct
     2161 gccccattac gagaaactca cggcctccgg ttccccgctc gattgcgtcg ggatctatca
     2221 ggccctcgcc cggtgcaacg agaagctggg acgcctcaag gacgcgggcg cgtggcgtca
     2281 gaaggcgggg caagggtatc tcgccttgaa c
//
LOCUS       DATLMA010000017         1027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_303148, whole genome shotgun sequence.
ACCESSION   DATLMA010000017 DATLMA010000000
VERSION     DATLMA010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303148"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            640..>1027
                     /locus_tag="VNA10_00225"
     CDS             640..>1027
                     /locus_tag="VNA10_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36134.1"
                     /translation="MMAGSSLTHGWIIDAYADYDRDSIVLCLWNERGAHRIEDLRVVP
                     TFFLHAPSSDLPAIRRRIEILDGVRDVREVQKRIALEDDEPKPVLEIVPRHYRDIRGL
                     AHILDSNGGYVDHRLFNVDLRFSQRYA"
BASE COUNT          199 a          335 c          289 g          204 t
ORIGIN      
        1 tccctcaccc gatccggatc tgcgattccg gaaggcccat agaaggccgc ggcggagtcc
       61 acgtatcgca atccaaacag attcctcaag aaatcaacaa tcggggccct ctcgggatgt
      121 ggaaccggag gctcgaagtt gttccaagtc gcattgcata tgcagaatgc accaggactt
      181 gacagaagct cgaacgcgat tattttctct ggcgacgttt ctagcattga gctcagtctt
      241 cctgaaagaa gctcccgata tttttggagc ttcccatccg cttcctgacg gtgtccatcc
      301 cggctaggcg aggctgagtg ccgccccaag aatcgaccgc gggcaccctg cttgcgcatg
      361 gcagattgag gcggcaccaa gttttcctgc caccgcggcc cgaagattgc acccagaccc
      421 gctctcgcga tcattcctcg aacttccgtg accgtttcct ccggactccg gtctgaatca
      481 acagagacgg ccagcatcat catatcgcac atgagttgcg actgccccgg gatgtcgagc
      541 tttcgcataa tgacgtgcgg gggcttgtaa gttactcgaa tgggtatgca ctttcaccga
      601 cctccctccc gcgccgcctc aagaggtcga tcccgcctcg tgatggcggg gagctcgctc
      661 acgcacggct ggatcattga cgcctacgcg gattacgacc gcgactcgat cgtcctgtgc
      721 ctctggaacg agcgtggcgc gcatcggatc gaggacctgc gggtcgtgcc gacgttcttc
      781 ctgcacgcac cctcgtcgga cctccccgcg atccgccgac ggatcgagat cctggatggc
      841 gtccgcgacg tgcgggaagt ccagaagcgc atcgccctcg aggacgacga gccgaaaccc
      901 gtcctcgaga tcgtgccgcg gcattaccgc gacatccggg gtctcgcgca catcctcgac
      961 tcgaacggcg ggtacgtcga ccatcggctg ttcaacgtgg acttgcgctt cagccagcgg
     1021 tacgcga
//
LOCUS       DATLMA010000018         1324 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_725127, whole genome shotgun sequence.
ACCESSION   DATLMA010000018 DATLMA010000000
VERSION     DATLMA010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725127"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1324)
                     /locus_tag="VNA10_00230"
     CDS             complement(<1..>1324)
                     /locus_tag="VNA10_00230"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HVG36135.1"
                     /translation="FLAFLTLLFTGITIGLVAFLSGYPGRSAPIFAGMFILDNFAIFF
                     KLLMLVSIVLTVLASIQFVGRAPYPAGDYYALLLFTGVGMLFMVSGNNLVSIYVALEL
                     MALSSYILAGYFKLEIKSTEAALKYFVLGAFSSGVLLYGLSLVYGIAGRMGLPELAKL
                     FETQGRSNLLIVGILLILAGLLFKIAAVPFHVWTPDVYEGSPTPVTAFFSVGPKLAAY
                     AILARIFYVGFPKFHADWGLIIALVSAATMVFGNVAALLQTNVKRMLAYSSIAHAGYA
                     LMGVLGFRTEFGLWGILVYLLAYTFMNFGVFALVVFLETKGYAAESVADFNGLARRNM
                     TAAVVMLVFLLSLAGIPPTAGFIGKYYLFTSAMKAGYAWLAVLAVLMSALSLFYYFRI
                     AAAMFFSEGEGAPLKSSYPLTAAVLICAVATVVVGVAPQPFVEMLRACV"
BASE COUNT          303 a          402 c          452 g          167 t
ORIGIN      
        1 gacgcacgcc cgcaacatct cgacgaacgg ctgcggcgcc acgccgacga ccaccgtcgc
       61 gaccgcgcag atcaggaccg cggccgtcag ggggtaggag ctcttgagcg gcgcgccctc
      121 cccctccgag aagaacatcg cggccgcgat gcggaagtag tagaagagcg agagcgccga
      181 catcaggacc gcgaggaccg ccagccaggc gtagcccgcc ttcatcgccg aggtgaacag
      241 gtagtacttg ccgatgaagc cggcggtggg cggaatcccg gcgagcgaga gaaggaacac
      301 gagcatcacg accgccgccg tcatgttccg gcgggcgaga ccgttgaagt ccgcgaccga
      361 ctcggccgcg taccccttgg tctccaggaa cacgacgagc gcgaacacgc cgaagttcat
      421 gaaggtgtac gcgagcaggt agaccaggat cccccacagc ccgaactccg tgcggaatcc
      481 gagcacgccc atgagcgcat agcccgcatg agcgatcgac gagtacgcga gcatgcgttt
      541 gacgttggtc tgcagcagag cggctacgtt gccgaaaacc atcgtcgcgg cggagacgag
      601 cgcgatgatc agtccccagt cggcgtggaa cttcgggaag ccgacgtaaa agatccgggc
      661 caggatcgcg tacgccgcga gcttcgggcc gaccgagaag aacgccgtga caggcgtggg
      721 cgagccctcg tacacgtcgg gcgtccagac gtggaacggc acggcggcga tcttgaagag
      781 gagtccggcg agaatcagca ggatcccgac gatcagcagg ttcgacctcc cctgcgtctc
      841 gaagagcttc gcgagctcgg gcagacccat ccggccggca attccgtaga cgagcgagag
      901 gccgtagagg aggacgcccg aagagaaggc cccgagcacg aagtacttca gcgccgcttc
      961 ggtgctcttg atctccagct tgaaatagcc ggcgaggatg taggaagaga gggccatcag
     1021 ctcgagcgcg acgtagatcg acacgaggtt gttgcccgac accatgaaga gcatcccgac
     1081 gcccgtgaag aggaggagcg cgtagtagtc gccggcgggg tagggagcgc ggcccacgaa
     1141 ctggatggac gcgagcacgg tcaggacgat cgacacgagc atcaggagct tgaagaagat
     1201 cgcgaagttg tccaggatga acatccccgc gaagatcggc gcgctccgtc cgggataccc
     1261 cgagaggaaa gcgacgagcc cgatcgtgat tcccgtgaag agcagcgtca gaaaggcgag
     1321 gaat
//
LOCUS       DATLMA010000019         2735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_1955,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000019 DATLMA010000000
VERSION     DATLMA010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1955"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VNA10_00235"
     CDS             <1..661
                     /locus_tag="VNA10_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36136.1"
                     /translation="FLEESYHLAAGETLMKAIAVAGILDGGNFGIEDLQQTLNMWYPR
                     GLEMFGSELGGDLVKGVFKTLKNREAQMIYIDEVLGKVKDANLAVIQAKARCSRDEAD
                     AALRRITQKGESVHGLTKDNLLFLPDRRFFRIRGLAEFGDYRNLDSDAAGVGYVYLPY
                     DIHGNLLTDRGKPVDRDTYVDYLRAVLPARYMTSRHWEFVKSDFLFNEKWGTPERAPA
                     T"
     gene            767..1555
                     /locus_tag="VNA10_00240"
     CDS             767..1555
                     /locus_tag="VNA10_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010677542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HVG36137.1"
                     /translation="MDLTYISMEKKDRVAIAWLNKPKANTYDADLMRDLNTMIDDVRF
                     DDDVDVCVIASKLDGVWSAGADINLLASSTPDYKAMFCLNCQETLSKMESTPKLFIAA
                     IDGHCVGGGLEIAMATDLRLASDGAWRIGLPEVTLGVLPGTGGTQRLPRLIGKSRAID
                     LMTTGRMLTPKEALDWGLLNRIFPRAKFWEDTMAFANGMTYPQHAARAVGLIKRSVTE
                     GLEMSMYEGFALERELQNRLFAMADAKEGFRAFLEKRKPAFHGK"
     gene            1609..2088
                     /locus_tag="VNA10_00245"
     CDS             1609..2088
                     /locus_tag="VNA10_00245"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36138.1"
                     /translation="MSGEPRIRVARVADLDALAAMWEKLENYHADLGGPEYRLAPGWK
                     GDWRRFTRSHIGHKDRLCLVAELDGTAVGFLLGAVLVRPRVFEHRSYGHIYDLFVDPT
                     QRNRGVGESLVNEALAWFRSRHVEKVDLYTHARNDMGLRFWKKMGFDPTVHILDRRI"
     gene            2193..>2735
                     /locus_tag="VNA10_00250"
     CDS             2193..>2735
                     /locus_tag="VNA10_00250"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HVG36139.1"
                     /translation="MNYDTILVTHRGPTAVVALNRPDKLNAMSMMLKAELVRALADLD
                     KHEATRTIVLTGSGDKAFTAGADIHEFQGRTAIEQWRMYEHGTLYDAVDRTAKPLLAM
                     INGYCFGGGLELAMACDTRIASDRATLGQTEINIGIIPGGGGSQRLPRLVGIGNALKL
                     TLTGDRIDATEAARMGLVDEV"
BASE COUNT          546 a          831 c          890 g          468 t
ORIGIN      
        1 gttcctcgag gagtcatacc acctcgccgc gggggagacc ctcatgaagg ccattgcggt
       61 cgcgggcatc ctggacggcg ggaactttgg gatcgaggat ctgcagcaga cgctcaacat
      121 gtggtacccg cgcggtctgg agatgttcgg gtccgagctg ggcggagacc tcgtgaaggg
      181 tgtgttcaag acgctgaaga accgcgaagc ccagatgatc tacatcgatg aggtgctcgg
      241 caaggtgaag gacgcgaacc tcgccgtcat ccaggcgaaa gcacgttgtt cccgagacga
      301 ggcggacgcc gcgttacgga gaatcacgca aaaaggggag tcggtgcatg ggctcacgaa
      361 agacaatctc ctcttcttgc cggatcgtcg gttcttccga atccgcggcc tcgcggagtt
      421 cggcgactac cgcaacctcg attccgacgc cgccggcgtg ggttacgtct atctgccgta
      481 cgacatccac ggaaatctgc tgacggatcg cgggaagccg gtcgaccgtg acacgtacgt
      541 cgactacctg cgcgcagtcc tcccggcacg atacatgacg agccgccact gggaattcgt
      601 gaagtccgat ttcctgttca acgagaaatg gggtacgccc gaacgcgccc cggcgacctg
      661 aagcgcggtc cgtctcaact ccgggccgcg gcgaccctac ggattggcgg gcttaagccc
      721 taccatttaa taaccggtgg accatcaatc ggagcgaggc ggaacgatgg acctcacgta
      781 catttcgatg gagaagaagg accgggtcgc gatcgcatgg ctgaacaagc cgaaggcgaa
      841 cacgtacgac gccgacctga tgcgcgacct gaacacgatg atcgatgacg tgcgattcga
      901 cgacgacgtc gacgtgtgtg tcatcgcgtc gaagctcgac ggcgtctggt ccgcgggcgc
      961 ggacatcaac ctcctcgcgt cgtccacgcc ggactacaag gcgatgttct gcctgaattg
     1021 ccaggagacg ctgagcaaga tggagagcac gcccaagctc ttcatcgcgg cgatcgacgg
     1081 acattgcgtc ggcggcggac tcgaaatcgc catggcgacc gacctccgtc tcgcctcgga
     1141 cggagcctgg cggatcgggt tgcccgaagt gacgctcggc gtccttcccg gaacgggagg
     1201 cacgcaacga ctcccgcggc tcatcgggaa gagtcgcgcc atcgacctca tgaccactgg
     1261 ccgcatgctc acgccgaaag aggcgctcga ctggggcctc ctgaatcgga tcttccctcg
     1321 ggcgaagttc tgggaggaca cgatggcctt cgcgaacggc atgacgtatc cgcagcacgc
     1381 cgcgcgcgcg gtcggcctca tcaagcgctc ggtcacggaa ggcctcgaga tgtcgatgta
     1441 cgaaggcttc gcgctcgagc gggaattgca gaatcgcctc ttcgcgatgg ccgatgcgaa
     1501 ggaaggcttt cgtgcgttct tggagaagcg caagccggcg ttccacggga agtgacgttc
     1561 ggatcgcggc cggcggacgt cggccgggaa aggcaggtgg cacgtatcgt gtccggtgag
     1621 cctcgcatcc gggtcgcccg ggtcgcggat ctcgatgcgc tcgcggcgat gtgggagaag
     1681 ctcgagaact accacgccga tcttggtgga ccggagtatc gcctcgcgcc cgggtggaag
     1741 ggagattggc ggcgcttcac acgtagccac atcgggcaca aggaccgcct ctgcctcgtc
     1801 gcagaactcg acgggaccgc agtcggcttc ctcttgggag cggtcctcgt acgcccgagg
     1861 gtcttcgagc accgatcgta cggccacatc tacgacttgt ttgtcgatcc gacccaacgg
     1921 aatcggggag ttggggaatc gctcgtgaac gaggccctcg cgtggttccg gtcgcgtcac
     1981 gtcgaaaagg tggatctgta cacgcacgcg cggaacgaca tgggcctgcg cttctggaag
     2041 aaaatgggat ttgatccaac ggtccacatc ttggatcgtc gaatttgacc acccgcgagg
     2101 gggcgtctcc gggcagtgat tgcaacctta aacaaggtta acgcatcgga gcgaggcctc
     2161 aagtcgccgg gtggccttgt cgcgccgatt ccatgaatta cgatacgatt ctcgtgactc
     2221 accgcggccc gaccgcggtc gtcgccttga atcgcccaga caagctcaat gcgatgtcga
     2281 tgatgctgaa agccgaactg gtccgcgccc tggccgacct cgacaaacac gaggcgacac
     2341 ggacgatcgt cctcaccggt tcgggcgaca aagccttcac ggcgggggcc gacattcacg
     2401 aattccaagg ccgcaccgcc atcgagcagt ggcgaatgta tgagcatggg accctgtacg
     2461 acgccgtgga tcgaaccgcc aaaccgctcc tggcgatgat caacggatac tgcttcggtg
     2521 gcggcctcga gctggccatg gcgtgcgaca ctcggatcgc ctccgatcgc gcgacgctcg
     2581 gtcagaccga gatcaacatc ggaatcatcc ctggcggcgg aggaagccag cgactgccgc
     2641 ggttggtggg gatcggcaac gcgctcaagc tcacactcac cggggatcga atcgatgcga
     2701 ccgaagcggc gcggatgggg ctggtggacg aggtc
//
LOCUS       DATLMA010000020         5369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_363915, whole genome shotgun sequence.
ACCESSION   DATLMA010000020 DATLMA010000000
VERSION     DATLMA010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5369
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363915"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1807
                     /locus_tag="VNA10_00255"
     CDS             <1..1807
                     /locus_tag="VNA10_00255"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HVG36140.1"
                     /translation="VICSDKTGTLTKGEMNVRVLVVGAREYEAVGEGFDPSGAVRADG
                     RVASLEAHPGLHGLLECGALCNDAVLKKEGPRWVVEGDPTEGALLVAARRAGVDPETV
                     RGEWPRVAEIAFTSERKKMSTLHAQLSESELREILALPEGERLRRLAGVPAVLHVKGA
                     PERILAACSHHVVDGERKPLSEYDRKQYLFRNQELATRALRVIGFAVREFQGAVPSLT
                     EETLEVDLTFLGLAGMMDAPRSDAIDAIRRCKKAGIRVVMITGDHKLTAMAVAREMGI
                     LQEGDRALSGEELEKLSDAELVREVERIRVYARVAPEHKMRIVDAWKKAGHIVAMTGD
                     GVNDAPALKRSDLGVAMGITGTDVAKESADMVLTDDNFASIVAAVEEGRGIYENIRKF
                     VAFLLSANAGEILIMFIATLAIADPNFLPFFVPVQLLWINLVTDGLPALALGVDPYPT
                     DIMDRPPRNPKEGVLSRDILFLIVVVSAILTVGTLGVFFLELREGADATRARTVAFTT
                     IVFFELFLVFAMRSPRQTIWQIGLFTNTKLILAVLASMALQVAVIYTPFLHAVFETEP
                     LTPLDWLETVLISFTAFAFVEVLKVVRHRMKAPAS"
     gene            1804..2838
                     /gene="rtcA"
                     /locus_tag="VNA10_00260"
     CDS             1804..2838
                     /gene="rtcA"
                     /locus_tag="VNA10_00260"
                     /inference="COORDINATES: protein motif:HMM:TIGR03399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003963 - RNA-3'-phosphate cyclase
                     activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HVG36141.1"
                     /translation="MIEVDGSHGEGGGQLVRMGVALSALTETPVRIVRIRAGRPAPGL
                     AAQHVTAIQAIAALCGAESTGVAIGASSIEFRPGKPTPGRLSFDVGTAGSVTLVLQAL
                     LPVAAAAPAPVRVRLVGGTDVRWSPPIDYFSRVFLPILRTLGGHTDVEVSRRGYYPRG
                     GGVVDAVIEPTRTWSPLRNSEAGETQRVRGIAHVSNLPEDVPKRMAHAALRRLHGIPD
                     VKIEQRVYHGEEAIGQGGALVLCAETDAGLLGSDSLAERGKPSERIGEEVAASLRTEI
                     ESQATFDVHAADQLLIYLARADGPSEFRARAVSGHMETMMWLIPQFVPCGFAVTREAG
                     GWQVSVEPGA"
     gene            complement(2835..3650)
                     /locus_tag="VNA10_00265"
     CDS             complement(2835..3650)
                     /locus_tag="VNA10_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008083561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HVG36142.1"
                     /translation="MDSCRVCLSNLSEMDRAAMEGIQIYELKRMDLRGATVIDGFPSV
                     GLVSSIVANYLINALNLTQIGIMDSIYFPTVALVRDGQPMNPVRIYAGSKVDDHDQIV
                     VFISEFQPPPNLIKAIAATVLDWAQDARCNLLVCPEGLIVDAREDEGDRQVEVYGIGS
                     TDKAMEMIRKNNITVFEEGVITGVAGVLLNEGRKRDFDVITLLSEAHPDYPDARAAAR
                     AIEIIDKLLLHTELDARPLYEEAERIEMQLKSIHHQTEAAKKPTEPARPNMYG"
     gene            complement(3665..4081)
                     /locus_tag="VNA10_00270"
     CDS             complement(3665..4081)
                     /locus_tag="VNA10_00270"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HVG36143.1"
                     /translation="MKAHLVHVEEMRFRAQAEGSPEVLFDSGDQPARRGPSPMQATLL
                     ATMACTASDVVSILRKERVPFRTLEIDAEAERAKDVPKVFTKIRLHYRVRGTNIQEAA
                     VKRAIDLSSEKYCTVGIMLRRAGVEFVNTHEILPME"
     gene            4169..4804
                     /locus_tag="VNA10_00275"
     CDS             4169..4804
                     /locus_tag="VNA10_00275"
                     /EC_number="1.1.1.302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone
                     5'-phosphate reductase"
                     /protein_id="HVG36144.1"
                     /translation="MRPRVIINAAMSVDGKIALPDGQVVRLSNDEDVRRVHQLRSKVD
                     AILVGVGTVLADDPKLTIKPEFAKGRNPLRVVLDSNGKTPVGAHVLDGSAPTVIVTSD
                     RSARVFPYAEVLRCGKDEVDLARLLDQLAERGVRTILVEGGSTVIWSFLLHGLADELK
                     VFVASRVLGGRSSPTLAGGPGVMSLDDSIRIRLDRAERLGDGVLLEYVVIR"
     gene            4801..5256
                     /locus_tag="VNA10_00280"
     CDS             4801..5256
                     /locus_tag="VNA10_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HVG36145.1"
                     /translation="MKLLCDHMLGSLARWLRLMGYDTAYPEPGPDRDLIDRARTEERI
                     LLTRDKELAARVPGAVQIRSDELEVQIREVAGVLRLGLVNPMSRCSLCNEVLVPVPPQ
                     EVKGLVPEGVRSRYQEFWRCPSCKRVYWQGSHWDKMVERLNHLDLPPAP"
BASE COUNT          902 a         1696 c         1777 g          994 t
ORIGIN      
        1 cgtgatctgc tccgacaaga ccgggacgct cacgaaagga gagatgaacg tccgggtcct
       61 cgtcgtcggc gcccgtgagt acgaggccgt cggggaaggg ttcgatccat ccggggccgt
      121 tcgggcggat ggtcgggtcg caagtctcga agcccatccc ggcttgcacg gactcctcga
      181 atgcggcgcc ctttgcaatg acgccgtcct caagaaagaa ggcccccgct gggtcgtcga
      241 gggtgatccg acggaaggcg cgctcctcgt cgcggcgagg cgcgcgggcg tggacccaga
      301 gacggtacgg ggggagtggc cgcgcgttgc cgagatcgcg ttcacatcgg agcggaagaa
      361 gatgtcaacc ctccacgccc aactgtccga atcggagctt cgtgagattc tcgcgttgcc
      421 cgagggagag cggctccggc ggctcgcggg cgtgccggcg gtcctgcacg tgaagggcgc
      481 acccgaacgg atcctcgcgg cgtgttccca ccatgtggtc gacggcgagc gaaagccact
      541 gtccgagtac gatcggaagc agtacttgtt ccggaatcag gagttggcca cgcgggccct
      601 ccgtgtgatt ggatttgcgg tccgcgaatt ccagggcgcg gtgccgtcgc tcacggagga
      661 aaccctcgaa gtggacctca cgttcctcgg gctcgcgggc atgatggacg caccccggtc
      721 cgacgcgatc gatgcgattc gccggtgcaa gaaggcgggg atccgggtcg tgatgatcac
      781 gggagaccac aagctcaccg cgatggccgt cgctcgggag atgggaatcc tccaggaggg
      841 ggaccgcgcc ctctccggag aagagctcga gaaactgtcc gacgcggagt tggtgcggga
      901 ggtcgagcgg atccgcgtct acgcgcgcgt cgccccggag cacaagatgc gcatcgtgga
      961 cgcctggaag aaggcggggc acatcgtcgc gatgaccggc gacggggtga acgacgcccc
     1021 cgcgctcaag cgatccgacc tcggcgtggc catgggcatc accgggacgg acgtggccaa
     1081 ggagagcgcc gacatggtgc tgacggacga caacttcgcg tccatcgtgg ccgcggtcga
     1141 ggagggccgc gggatctatg agaacatccg gaagttcgtg gccttcctgc tgtccgcaaa
     1201 cgcaggggag atcctgatca tgttcatcgc gacccttgcc atcgcggacc ccaacttcct
     1261 cccgttcttc gtaccggtac agctcctgtg gatcaacctc gtgacggacg gcctcccggc
     1321 cctggccctc ggcgtcgacc cgtacccgac ggacatcatg gatcgcccgc cccggaatcc
     1381 gaaggagggc gtgctgtccc gggacatcct cttcctgatc gtcgtcgtct cagcgatcct
     1441 gacggtggga accctcgggg tctttttcct cgaattgcga gaaggcgccg acgcgacccg
     1501 ggcccggacc gttgcattca cgacgatcgt cttcttcgag ctcttcctcg tcttcgcgat
     1561 gcgatccccg cgtcaaacga tctggcagat cggcctgttc acgaacacga agctgattct
     1621 cgcggtcctc gcgtcgatgg cccttcaggt cgcggtgatc tacacgccgt tcctccacgc
     1681 ggtgttcgag acggagccgc tcacgcccct cgactggctc gagacggtcc tcatctcgtt
     1741 cacggcattc gcgttcgttg aggtgctcaa ggtcgtccgg catcggatga aggcgccggc
     1801 ctcatgatcg aggtcgacgg aagccacggc gagggaggcg gtcagctcgt ccgtatggga
     1861 gttgccctct cggcgctcac cgagaccccg gtccggatcg ttcggatccg ggccggccgg
     1921 ccggctccgg gcttggcggc gcaacacgtg acggcaatcc aggcgattgc cgcattgtgc
     1981 ggagccgagt ctaccggtgt cgcgatcgga gcttcgtcga tcgagttccg accggggaag
     2041 ccgacgccgg gccgtctctc ctttgacgtg gggacggcgg gcagcgtcac tttggtcctg
     2101 caggccctgc tcccggtggc cgccgcggcc ccggccccgg ttcgcgtgcg tctcgttgga
     2161 ggaaccgacg tgcgatggtc tccgcccatc gactacttca gccgggtctt cttgcccatc
     2221 ctccgaaccc tcggaggcca caccgatgtc gaagtctccc ggcgtgggta ctatccgcga
     2281 ggcggtggag tcgtcgacgc cgtcatcgag ccgacgcgga cctggtcacc ccttcgcaat
     2341 tcggaagcgg gcgaaaccca gcgggtgcgc ggcatcgcgc acgtctcgaa cctcccggag
     2401 gacgtcccga agcggatggc ccacgcggcg ctccgccgcc tccacggcat tccggacgtg
     2461 aaaatcgagc aacgggtgta ccacggcgag gaagcgatcg ggcagggagg agccttggtg
     2521 ctgtgtgcgg agaccgatgc cggcctcctc ggatccgact ccctcgcaga acgaggaaag
     2581 ccctcggaac gcatcggaga ggaagtcgcc gcgtccctga ggacggagat cgagtctcag
     2641 gcgacattcg acgtccatgc cgcggatcaa ctcctgatct atctggcccg ggccgacggc
     2701 ccctcggagt tccgtgcgcg agcggtctcc ggtcacatgg agacgatgat gtggctcatc
     2761 ccgcaattcg taccgtgcgg gttcgcggtg acgcgagaag ccggcgggtg gcaggtgagc
     2821 gtcgagcccg gcgcctaacc gtacatgttc ggccgcgcgg gttccgtcgg tttcttcgcc
     2881 gcctcggtct ggtggtgaat cgacttgagt tgcatctcga ttcgctcggc ctcctcgtac
     2941 aacggccggg cgtcgagttc cgtgtgaagg agcagcttgt cgatgatctc gatggcgcgc
     3001 gccgccgctc gggcgtccgg gtaatcggga tgggcttcgc tcagcagggt gatcacatcg
     3061 aagtcccgtt tgcggccttc gttcaggagg acgcccgcaa cgcccgtgat gacgccttcc
     3121 tcgaacaccg tgatgttgtt cttgcggatc atttccatcg ccttgtcggt cgatccgatc
     3181 ccatacacct cgacttggcg gtcgccctcg tcctcgcggg cgtcgacgat gagcccctcc
     3241 ggacacacga ggaggttgca gcgcgcgtct tgggcccagt cgaggaccgt cgccgcgatc
     3301 gccttgatca agttcggcgg cggctggaac tccgagatga acacgacgat ctgatcatga
     3361 tcgtccacct tcgacccggc atagattcgt accgggttca tcggctggcc gtcccgcacc
     3421 agtgcgacgg tcgggaagta gatggagtcc atgatcccga tctgcgtcag gttcagcgcg
     3481 ttgatcaggt agttggccac gatggagctg acgaggccca cgctcgggaa tccatcgatc
     3541 acggtcgctc cgcggaggtc catccgtttg agctcgtaaa tctggattcc ttccatggcg
     3601 gcgcggtcca tctcggacag gttacttaaa catacccggc acgagtccat gccctgagaa
     3661 cacatcattc catcgggaga atttcgtgcg tgttgacaaa ctccacgccc gcgcggcgaa
     3721 gcatgattcc gacggtgcaa tacttctcgg atgacaggtc gatcgcccgc ttgacggcgg
     3781 cttcctggat gttggtcccg cgcacccgat agtggaggcg aatcttcgtg aagaccttcg
     3841 ggacgtcttt cgcccgctcg gcctccgcat cgatctccag ggtacggaac ggcacgcgct
     3901 ccttccgcag gatcgacacg acgtccgatg cggtgcacgc catcgtcgcg aggagcgtcg
     3961 cctgcatggg actcgggcct cggcgagccg gctggtcccc cgaatcgaat aggacttcgg
     4021 gggatccctc ggcttgggcc cgaaagcgca tctcctcgac gtggaccaga tgagccttca
     4081 tcttatcgcc ggagtcgcca cgctcccctc ctagatgaac ttgcatcgag cccgcaaagt
     4141 tgttatgcgg taggtccttg gcacgggtgt gcgacctcgc gtcatcatca acgcggcgat
     4201 gagcgtcgat gggaagattg ctctcccgga tggtcaagtc gttcggctga gcaacgacga
     4261 agacgtacgg cgcgtccatc aactgcgctc gaaggtcgac gcgattctcg tgggcgtcgg
     4321 aaccgtcctg gcggacgatc cgaaactcac catcaagccc gagtttgcaa aaggtcgaaa
     4381 cccgctccgg gtcgtgcttg attcgaatgg caagacgccc gtcggcgcgc atgtgctcga
     4441 tggaagcgcg cccacggtga ttgtgacctc cgatcgatcc gcgcgggtgt tcccgtacgc
     4501 ggaggtctta cgctgcggga aggatgaagt cgacttggcg cggctgctcg atcagctcgc
     4561 agagcgaggg gttcgaacga tcctcgtcga gggagggagc acagtcattt ggtcgttcct
     4621 ccttcacgga ctcgcggacg aactgaaagt tttcgtcgcc agccgggtgc tcggcggtcg
     4681 ctcgtcgccg acgttggcag ggggccccgg cgttatgtcc ctcgacgact cgatccggat
     4741 tcgactggac cgggcagaac gactcgggga cggcgtcctc ttggagtacg tagtgatccg
     4801 atgaaactgc tgtgcgacca tatgctgggc agtttggccc gctggctgcg tctcatgggg
     4861 tacgacacgg catacccgga accgggtccg gaccgcgact tgatcgatcg tgcacggacg
     4921 gaggagcgca tcctcctgac ccgcgacaag gagctcgccg ctcgcgtccc cggtgcggtc
     4981 caaatccgga gcgatgagct cgaggtgcag attcgcgagg tcgcgggcgt cctccggctg
     5041 gggctcgtga atccgatgtc gcggtgctct ctgtgcaacg aggtcctcgt tccggttccg
     5101 ccccaagagg tgaaaggtct ggtaccggag ggtgtccgct cccgctacca agagttctgg
     5161 cgatgccctt cctgcaagcg cgtgtattgg cagggtagcc actgggacaa gatggtcgag
     5221 cggctgaacc accttgacct cccaccagcg ccgtagcctc cgtgcgtttg cggatcccgc
     5281 gggagggaaa tcctgatatg gcgaatcgaa aatggggtga gggtctagcg gatggatggc
     5341 tcccttatcc tcgaggacgg aacggccgt
//
LOCUS       DATLMA010000021         1601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_303528, whole genome shotgun sequence.
ACCESSION   DATLMA010000021 DATLMA010000000
VERSION     DATLMA010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303528"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..539)
                     /locus_tag="VNA10_00285"
     CDS             complement(114..539)
                     /locus_tag="VNA10_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36146.1"
                     /translation="MIQTVLAKGVLEPTWDFVPVGNRLRFDLTFLIERATKWKLIDWD
                     MPKLKYFWFTKPYLDLAPVLVMLNRGTFSGSSLHNFADKESGARVPKMYREGLFDEII
                     DYVTRERDAAMDLLKESRGVIGDLGDRRRRPIGPGEAKS"
     gene            811..>1601
                     /locus_tag="VNA10_00290"
     CDS             811..>1601
                     /locus_tag="VNA10_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HVG36147.1"
                     /translation="MRVGIIGVGMTAFRPSTPEYNWKELMFEAASRAYADAEINPRDD
                     VDSFLTCAEDYYEGFGIFDEFVPDQLGAALRPTCTVSGDGLQGLANAYMQIQTGLIDV
                     AVVEAHSKASDVVTLDGVIEHALDPIWNKPLGAHPFVVAGLEADAYLRATHTSLKALA
                     TVVAKNHGNALRNPLAAYGAAVDVEDALRSPERFAPLRALDISNPADGCVVLVLASER
                     AAKKLHSNPVWIRGVGWASDSPSLETRDWTDAAYTRLAAEMAYRLA"
BASE COUNT          265 a          514 c          527 g          295 t
ORIGIN      
        1 cggtgcggat ttctttttcc gcgaagtccc gcgccgtccg gcggatcatc tcgtgttccg
       61 gcgagagctg aaagtccatc gcgttccccg gggtgaaagg cgcggacggc ctcttaggac
      121 ttcgcttcgc ccgggccaat cggccgtcgg cggcggtctc cgaggtcgcc gatcaccccg
      181 cggctctcct tcaagaggtc catcgccgcg tcgcgctcgc gggtcacgta gtcgatgatc
      241 tcgtcgaaga gaccttcgcg atacatcttc ggaacgcggg cgccgctctc cttgtcggcg
      301 aagttgtgga ggctcgagcc ggagaacgtc cctcggttca acatcacgag gaccggcgca
      361 agatcgaggt acggtttcgt gaaccagaag tacttcagtt taggcatgtc ccagtcgatg
      421 agtttccatt tcgtggcgcg ctctatgagg aacgtcaagt cgaaccggag tcggttgccg
      481 acgggcacga agtcccacgt cggctccagg acccccttgg cgaggaccgt ctggatcacc
      541 tgtttctctc cccattccca ctcggcgatg acctggaaca gcccggtcgg agtcaggtcc
      601 tccgcgaggc cctggtactg gaccgtgacg attcggtcct gctgcggatc gtctcccgtc
      661 gtctcgacgt cgaagtagta gagcggcagt cggaacccgt tcccgaaccc gacgaaacgg
      721 cgcggcggac tttaagccct tccgctgcga cagtcttttg agcggtcgcg gtcttcccgg
      781 cggcggggcg cgtcggccgg aagggaggac atgcgggtcg gcatcatcgg ggtcggcatg
      841 acggcgttcc ggccgtcgac cccggagtac aactggaagg aattgatgtt cgaggccgcg
      901 tcgcgggcct atgcggacgc ggagatcaac ccgcgcgatg acgtcgactc gttcctcacg
      961 tgcgccgagg actactacga aggattcggg atcttcgacg agttcgtccc cgaccaactg
     1021 ggggcggcgc tccggccgac ctgtacggtc tccggcgacg gactgcaagg tctcgcgaac
     1081 gcctatatgc agattcaaac gggcctcatc gacgtcgccg tcgtggaggc gcacagcaag
     1141 gcgtccgacg tcgtgacgct cgacggcgtc atcgagcacg cactcgatcc gatctggaac
     1201 aagccgctcg gagcccatcc gttcgtcgtt gcgggcctcg aagccgacgc gtacctccgc
     1261 gcgacgcata catcgctgaa ggccctggcg acggtcgtcg cgaagaacca cggaaacgcc
     1321 ttgaggaacc cgctcgcggc ctacggcgcc gcggtggacg tggaggatgc gctgcggtct
     1381 ccggagcggt tcgccccgct ccgcgcgctc gatatctcga atccggcgga tggatgcgtg
     1441 gtcctcgtcc tagcctctga acgcgcggcg aagaagttgc actcgaatcc ggtctggatc
     1501 cgtggcgtcg gttgggcgag tgattctccg agcctcgaga cgagggattg gaccgacgcg
     1561 gcctacacgc ggctcgccgc cgagatggcg taccgattgg c
//
LOCUS       DATLMA010000022         4059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_786267, whole genome shotgun sequence.
ACCESSION   DATLMA010000022 DATLMA010000000
VERSION     DATLMA010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786267"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..682)
                     /locus_tag="VNA10_00295"
     CDS             complement(92..682)
                     /locus_tag="VNA10_00295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36148.1"
                     /translation="MIEPLPPVKVTAEPIDVRVAAVEVSHDPAIESVAVPRLRTEGPF
                     EVRLPSKTDVELVSVSAPDQVMLEAKVVLMPGLTTRSCRVCGTLMEPPDRLMTTVEVP
                     AANAPAAVLSDRIVRMLAFAVSDPPTPTVRAFATIGRLAPEVVNVVVPGPPWIATVCA
                     TRLPEAIVNVVFEEPLSNSIVLNSLPAKLAPANVMI"
     gene            651..>4059
                     /locus_tag="VNA10_00300"
     CDS             651..>4059
                     /locus_tag="VNA10_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36149.1"
                     /translation="MTFTGGSGSITLGAGQRFAMLTIAGTVALASDLTADSLTVTSSD
                     VLTMTSYGIVFNSLTVNGTISDGTVNVTDLTVTNSDTTALVTIAGFTEWSRGSSYAWT
                     HTSTESSQTITWSIGGNAAGIPYTVTKDGSSFATGTVTSSGQVVFTMLGSDPAMQVTV
                     YNPIPPPWWQSSYMLAIFPIGILLGVAMFAQRQRWRPAKAFLVDDNNRMLREFTLDPA
                     CQVTYDQAVQAGVLEAVEKPIKVAKYHGQTVRGDALAVVLLAYGPVTLEHVEFAREML
                     VQIQDKFEDAVKQRLEEARAQEANVATQMDDLANRRTEVDARAAEVQTMAQQSEVLQA
                     KITADTEAVEAKEQDLRRREEELANNRKAVDAMARQIEEDRSSLDRHTGELQDRAAEI
                     AAKSEAVQTREEAVSALEQTLRDRDETLATGEASLQEIRERLATDTSAVQVRFEETKQ
                     REEALGRDQANLSNAREKFEAEQRELLEFKRSIDSRVSAVEEKENEMDRLSKDLAARE
                     ARVVPEEARLAERTNVADQKEADLKAREDELTTRIQTLDGREQELASREITVNEDRVV
                     LQEARGAFESGRREFEERKNQHDEEARRRRDDLDGQAKTVGESQLRLAQEKETLDAAH
                     SERSQAILSREIELEAREQSLREKEEAIRTQADENTRRFSELTGREESLEIEAAKADK
                     IRSELDDRKADLTSRAKELEEEAARLRGEETKAAEERRTWQTTLQSEQALLKDQRDAF
                     EQEAASARASWADRVMRIEAREVDVEEKEEKVRTDVDWIARSDEDLKRREKVVEEAGR
                     SAEQVQASAERATKEAEQRFLEIESRERALREEAAHEAIDLSKRTEALKQFETEVNSK
                     QADFEKDRTARTQRLQETETELHSRADTLDAKRRELEERESRIAVSEESLRQSDQRLQ
                     QERADLQAAAKQLESQQLELAQLKDRYESEAARVRSEAEGLRQSVATKESELQAERER
                     IERDSSALQETLGAKAKEMSVRERALTAREAELQTEEQELEARGRELESKERQAEAHL
                     TEMSAQAMALIRREQDLNDRGTQLEQTVRGFESEATEKRREWESLQTSLKSQQTQFTV
                     SSESRAGELAKKTEELEGRDRSLRAASAQLEVERSKLDAEAKTQSAKS"
BASE COUNT          921 a         1259 c         1326 g          553 t
ORIGIN      
        1 cctggatcat ctccgggaat tggacgaacg cgtcgacatc ggcatcctgg tccgcaggat
       61 ctgccgttgt cacattcaac gccacgacgg atcagatcat gacgttcgcg ggagccaact
      121 tggccggcaa cgaattcagc acgattgaat ttgacagcgg ttcctcgaac accacgttca
      181 cgatggcctc gggcagcctt gtggcgcaga cggtcgcaat ccaaggtggc cccgggacga
      241 ccacattgac gacctcgggc gcgagtctcc cgattgttgc gaacgccctg acggtgggtg
      301 tcggtggatc gctcaccgcg aacgcgagca tcctgacgat tcggtcgctg agcacagccg
      361 ccggcgcgtt cgctgccggg acctcgaccg tcgtcatcaa cctgtccggc ggctccatca
      421 acgtcccgca gactctgcac gacctcgtcg tgagccccgg catcagcacg acctttgcct
      481 cgagcatcac ttggtccggg gcgctgacgc ttacgagttc cacgtccgtc tttgacggca
      541 atctgacttc gaacggccct tccgtcctca acctcggaac cgccacgctc tcgatcgcag
      601 gatcatggga cacctccacc gcggcgaccc tcacgtcgat cggctccgcg gtgaccttca
      661 ccggcggcag cggctcgatc acccttgggg cgggccagcg gttcgccatg ctaaccatcg
      721 ccgggaccgt cgccctcgcg tccgacctga ctgcggactc cctgaccgtg acaagctcgg
      781 acgtgctgac gatgacgagc tacggcatcg tattcaacag cctgacggtc aacgggacga
      841 tttccgacgg aactgtgaac gtgacggacc tcacagtcac gaacagcgat acgaccgctt
      901 tggtcaccat cgcggggttc accgagtggt cccgaggttc ctcgtacgct tggacccata
      961 cctccaccga atcgtcccag acgatcacgt ggtcgatcgg tggaaatgcc gcgggcatcc
     1021 cgtacacggt gaccaaagac ggctcgtcgt tcgcgaccgg aaccgtcacc agttccggtc
     1081 aggtcgtctt cacgatgctc gggtccgacc ccgccatgca ggtgacggtc tacaatccga
     1141 ttccgccgcc gtggtggcag tcctcctaca tgcttgcgat cttccccatt ggaatcttgt
     1201 tgggtgttgc aatgttcgcg caacgacagc gctggaggcc cgcaaaggcc ttcctcgtgg
     1261 acgacaacaa tcgaatgctc agggaattca ccctggaccc ggcctgccag gtcacgtacg
     1321 accaggcggt gcaggccggc gtcttggagg cggtcgagaa gccgatcaag gtcgcgaagt
     1381 accacggcca aacggtccgc ggggacgcac tggcggtcgt gctcctcgca tacggaccgg
     1441 tcacgctgga gcacgtcgag ttcgctcggg agatgctcgt ccagattcag gacaagttcg
     1501 aggacgcggt caagcaacgc ctcgaagaag cccgcgccca agaggccaac gtagcgactc
     1561 agatggacga cctcgcgaac cgccggaccg aggtcgacgc acgagccgcc gaagtccaaa
     1621 cgatggccca gcaatcggaa gtcctccaag cgaaaatcac cgcggacacc gaggccgtcg
     1681 aagcgaagga gcaggatctt cgacgaagag aagaggagct ggcgaacaac cgcaaggccg
     1741 ttgatgcgat ggcccgccaa atcgaagagg accgcagttc cctcgaccga cacaccgggg
     1801 aacttcagga ccgggcggcc gaaatcgccg cgaagtccga ggcggtccag actcgagagg
     1861 aagcggttag cgcgctcgag cagacccttc gggaccgaga cgagaccctc gcgacgggag
     1921 aagcgagcct tcaggaaatc cgggagcgcc tcgccaccga tacgtcggcg gtgcaagtgc
     1981 gattcgaaga gaccaaacag cgtgaggaag ccctcggccg cgatcaagcg aacctctcga
     2041 atgcccgcga gaagttcgag gcggagcagc gagagctgct cgagttcaag cgttccatcg
     2101 acagccgggt cagcgccgtt gaggagaagg agaacgagat ggaccgcctg tcgaaggacc
     2161 tcgccgcgcg cgaggcccgc gttgtgcccg aggaagcacg gctcgcggag cggacgaatg
     2221 tcgcagacca gaaggaagcc gatctgaaag ctcgcgagga cgagctgaca acgagaatcc
     2281 agacactcga cgggcgcgag caggagctcg ccagccgcga gatcacggtc aacgaggacc
     2341 gcgtggtcct ccaggaagcg cgcggggcgt tcgagtccgg tcgaagagaa tttgaggaac
     2401 gcaagaacca gcacgacgaa gaggcgcgcc gacgtcggga cgacctggac ggtcaagcca
     2461 agacggtcgg cgagagtcag cttcgcttgg cccaggagaa agaaactctc gatgctgcgc
     2521 acagcgagag gagtcaggcc atcctgtccc gggagatcga gctcgaggcc cgcgaacagt
     2581 ccctccgaga gaaggaggag gccatccgaa cgcaggcgga cgaaaacacg aggcgcttct
     2641 cagaactgac cggtcgggag gagtccctcg aaatcgaggc ggcgaaggcc gacaagatcc
     2701 ggagcgagct cgatgaccgg aaagccgatc tcacgagccg cgccaaagaa ctcgaagaag
     2761 aggcggctcg attgcggggc gaggagacga aggcggccga ggagagacgc acctggcaga
     2821 cgaccttgca gtccgagcaa gcgttgctca aggaccagcg agacgcgttc gagcaggagg
     2881 ccgcttcggc gcgtgcctcg tgggccgatc gggtaatgcg gatcgaggcg cgcgaagtcg
     2941 acgtcgaaga aaaggaagaa aaggtccgga ccgacgtcga ctggatcgct cgaagcgacg
     3001 aggacctcaa gcgtcgtgag aaggtcgtcg aggaggccgg gcggtccgcg gagcaggtgc
     3061 aggcgagcgc cgaacgcgcg acgaaagagg ccgaacagcg attcctcgag atcgagtcgc
     3121 gcgaacgcgc ccttcgggaa gaggccgcac acgaggcaat cgatctcagc aagcggacag
     3181 aggcgttgaa gcaattcgag accgaggtga actcgaaaca ggccgacttc gagaaggacc
     3241 ggacggcgcg gacccagcgg ctccaggaga ccgagaccga actccattca agggccgaca
     3301 cccttgacgc gaaacgccgc gaactcgagg aacgagagag ccgcatcgcg gtgtcggagg
     3361 agtctctccg tcagagcgac cagcgacttc agcaggaacg tgccgacctc caggcggccg
     3421 cgaaacagct cgaatcccag cagctcgaac tcgcgcagct caaagaccga tacgagtcgg
     3481 aagccgcgcg ggttcgcagt gaagcggagg gcttgcggca atccgtagca acgaaggagt
     3541 ccgaactgca agcggagcgg gagcggatcg aacgcgattc gtccgccctc caagagaccc
     3601 tcggcgcgaa ggcgaaggag atgtcggtcc gggaacgagc gctcaccgcg cgcgaggcgg
     3661 agctccaaac cgaggagcaa gagctcgagg cccgcggacg agagctcgaa tcaaaagaac
     3721 gccaggccga ggctcacctg accgagatgt ccgcgcaggc gatggccctc atccggcgag
     3781 agcaggacct gaacgaccga gggacccagc tcgaacagac cgtgcgtggg ttcgagtcgg
     3841 aagcgacgga gaaacgccgc gagtgggagt cccttcagac gagcctgaag tcgcagcaaa
     3901 cccaattcac tgtgtcgtcg gaatctcgtg ccggcgagct cgcgaagaaa acggaagaac
     3961 tcgagggacg ggatcgcagc ctgcgcgcgg cttcggccca gttggaggtc gaacgatcca
     4021 aactcgatgc tgaagcgaaa acccaatccg ccaaaagcg
//
LOCUS       DATLMA010000023         2314 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_484585, whole genome shotgun sequence.
ACCESSION   DATLMA010000023 DATLMA010000000
VERSION     DATLMA010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484585"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VNA10_00305"
     CDS             <1..492
                     /locus_tag="VNA10_00305"
                     /inference="COORDINATES: protein motif:HMM:NF036996.4"
                     /note="allows the formation of correctly charged
                     Gln-tRNA(Gln) through the transamidation of misacylated
                     Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA
                     synthetase; forms a heterotetramer of GatD2E2; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase GatDE subunit D"
                     /protein_id="HVG36150.1"
                     /translation="GRVLPDGTVELSDRALPRAHGPTKVDDALDTNVALVAFYPGQRS
                     TELEAILQGRHGAVIAGTGLGHVSEDLIPVLHRATRDGVAVVMTTQTLQGRVGMRVYD
                     TGRDLLKAGVIEGQDMTPETAYVKLMWVLGHTREHPEVARAMATNVAGEINPKIGLDE
                     FAE"
     gene            551..1012
                     /locus_tag="VNA10_00310"
     CDS             551..1012
                     /locus_tag="VNA10_00310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36151.1"
                     /translation="MKIDQVGEVGVVLTDANEPVLHGGDQIIGYRSLKYLIFKPVALS
                     KKTLVEQREGWVWQTRRRLLLLDMEWLDLPGGKKGKRYHEIPLEETIDVVPKRRRVLL
                     VTEDKAHGRVVFEFRPFGAASRLLAWLKKEKEHRRMREEGTLRSPYREEDR"
     gene            complement(1009..1317)
                     /locus_tag="VNA10_00315"
     CDS             complement(1009..1317)
                     /locus_tag="VNA10_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36152.1"
                     /translation="MGRVFDFAKRRIAGYIVFWILVLLFLGLFYRNDPPAQAGALFIL
                     IIAFIGSLLYTRRLKRKQRARRETREAAVRMQQAQAVQPPQRTPSPPPRQPIEQMPGR
                     "
     gene            1427..1876
                     /locus_tag="VNA10_00320"
     CDS             1427..1876
                     /locus_tag="VNA10_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36153.1"
                     /translation="MSALDEYQGIWDMFAQMHRETHGEKHAPIRDFNCCGEYAVAMAL
                     RAASTLRPEYPHYLLLRTAAMPELDRDFYVKNLLSTDGEPEPSDPEPLREYRASRRYH
                     ILWTELKEAATRIASLERELEESGARIADLEATLRKAGVAPEAVEKA"
     gene            1903..>2314
                     /locus_tag="VNA10_00325"
     CDS             1903..>2314
                     /locus_tag="VNA10_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010876346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase GatDE subunit E"
                     /protein_id="HVG36154.1"
                     /translation="MDYRALGLKVGLEIHQQLAAHKLFCEDVSALVDTAQGQRFRRRL
                     RPTQSELGEVDAAAIEEAKRRLTFVYETTTNSCLVEADEEPPHPPNPEALDIALEIAL
                     LLNARPVSEVDFMRKIVIDGSNTSGFQRSALVALD"
BASE COUNT          443 a          744 c          762 g          365 t
ORIGIN      
        1 ggccgcgtcc tcccggacgg cacggtcgag ctctcggacc gcgcattgcc tcgcgcgcac
       61 ggccccacca aagtggacga cgccctggac acgaacgtcg ccctggtcgc cttttatccg
      121 ggtcaacgat cgacggagct cgaggcgatc cttcaagggc ggcacggcgc cgtgatcgcg
      181 gggaccgggc tgggccacgt ctccgaggac ctcattccgg tcctccatcg cgcgacaagg
      241 gacggcgtgg ccgtcgtcat gacgacccag acccttcagg gacgcgtggg catgcgcgtc
      301 tacgacacgg gccgtgacct cctgaaggcg ggggtcatcg agggtcagga catgacgccg
      361 gagacggcct acgtgaagct catgtgggtc ctcggccaca cgcgcgaaca tccggaggtc
      421 gcgcgggcga tggcgacgaa cgtggccggc gaaatcaatc cgaagatcgg cctcgacgag
      481 ttcgcagaat gaatcgcgcg ccgccaacgg ctcgttaacc ttatcccgcg cgcggggttc
      541 ggcacatcgg atgaagatcg atcaggtcgg ggaggtcggc gtcgtcctaa ccgacgcgaa
      601 cgagcccgtc ctccacgggg gcgaccagat catcggatac cgatcgctca agtacctcat
      661 cttcaagccc gtcgcccttt cgaagaagac gctcgtcgag cagcgggagg gttgggtctg
      721 gcagactcga cgtcggctcc tcctcctgga catggaatgg ctcgatctcc ccggcggcaa
      781 gaaggggaaa cgctaccacg aaattccgct cgaagagacg atcgacgtgg tcccaaaacg
      841 gaggcgcgtg ctcctcgtca cggaggacaa agcgcatggc cgggtcgtct tcgagttccg
      901 accgttcggc gcagcgtctc gcttgctcgc gtggctcaag aaagagaagg agcaccgccg
      961 gatgcgagag gaaggcacgt tgcgctctcc gtaccgggaa gaggaccgct agcgaccggg
     1021 catctgctcg atcggttgcc tcggaggcgg ggatggcgtc cgttgaggtg gttggacggc
     1081 ctgcgcctgc tgcatccgta cggccgcctc tcgggtctcg cggcgggcgc gctgcttcct
     1141 ctttagccgt cgagtgtaga ggagcgagcc aatgaacgcg atgatgagga tgaacaacgc
     1201 gcccgcttgg gccggaggat cattgcggta aaagaggccg aggaacagga ggaccaggat
     1261 ccagaagacg atgtagcccg cgatccgtcg cttggcgaaa tcgaagaccc ggcccattcc
     1321 ctcgtccgct cgtccggcga ggacaagaag ccatcggtcc cggtcgcacg gatgagacca
     1381 ttccaaaagt acatcggccg agacggcgtt tgtgaggcga ttccccatgt ccgcactgga
     1441 tgagtaccaa ggcatctggg acatgttcgc gcaaatgcac cgcgagaccc atggcgagaa
     1501 gcacgccccg atccgggact tcaattgctg cggcgagtac gcggtcgcca tggcgttgcg
     1561 tgccgcgtcg acactgagac cggagtatcc gcactatctc ctccttcgaa cggcggcgat
     1621 gcccgaactc gaccgcgatt tctacgtcaa gaacctcttg tccacggatg gcgagccgga
     1681 gccgtcggac cccgagccgc tccgcgaata tcgagcgagc cgacggtatc acatcctctg
     1741 gacggaactg aaggaggccg ccacgcggat cgcgtccctc gaacgggagc tcgaagaatc
     1801 cggggcccgc atcgcggatt tggaggcgac cctccgcaaa gcgggagtcg cccccgaggc
     1861 cgtagagaag gcttaatccc gagcctgggt ttgctgagcc gaatggacta ccgtgcgctc
     1921 ggcctgaagg tcggcctgga gatccaccag cagctcgcgg cgcacaagct gttctgcgag
     1981 gacgtctcgg ccctggtcga cacggcccag ggccaacgat tccgtcgccg gttgcgtccg
     2041 acgcagtccg agctcgggga ggtcgacgcg gccgcgatcg aggaagcgaa gcggcgcctc
     2101 acgttcgtct acgagacgac gacgaattcc tgcctcgtcg aagcggacga agagccgccc
     2161 catccgccca acccggaggc cctcgacatc gcgctcgaga tcgcgctcct gctgaatgca
     2221 aggcccgtga gcgaagtcga cttcatgcgg aagatcgtga tcgacggctc gaacacctcc
     2281 ggcttccagc gctccgcgct cgtggcctta gacg
//
LOCUS       DATLMA010000024         4400 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_364066, whole genome shotgun sequence.
ACCESSION   DATLMA010000024 DATLMA010000000
VERSION     DATLMA010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4400
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364066"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VNA10_00330"
     CDS             <1..1246
                     /locus_tag="VNA10_00330"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HVG36155.1"
                     /translation="GRLLWLLGQQVRDHFEELSRLESQNVGKPLREAKGDMAYVYKLF
                     EYYAGLADKIQGETIPVPGARFDYTVREPLGVTAHIAPWNYPLLLASRGVAPALAAGN
                     AVVLKPATLTPLTALKLGELAGAAGFPPGIVNVVTGPGRDVGGALAAHPDVDSVTFTG
                     STETGKQLLRVVADRVVPTTLELGGKNPQIVLADAKLDRAVKGALWGAFQNAGQMCWA
                     GSKLLVHESIAPSFLAKLKDQVEKLRLGPPLKDDVQMGPLVSREHATNVVAAIEDGIG
                     KGAKLLAGGSRTDAGEMKDGNFVKPTLFEDPPAAARVAREEVFGPVVAAWRFDDLDDA
                     IARANDTPYGLAAGLWTQDVAKAHAIARRLQAGMVSINEFPVTFPQTPFLGWKQSGLG
                     QEQGVDAVLFYTHVKNVLVNLE"
     gene            1251..1796
                     /locus_tag="VNA10_00335"
     CDS             1251..1796
                     /locus_tag="VNA10_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019159205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HVG36156.1"
                     /translation="MIYVAPSAVLVGDVTVEDAASIWHGAVLRGDFDSIVVARDSNIQ
                     DNAVVHVDRGLPAVVGRRVTVGHAAVVHGCSVGDDCLVGMNSTINSGAVIGSGSVVAS
                     GAVVRENAEFPADTLLAGVPARPIRTVDETLRRRIELSWSIYRELAKATLPTRPAIQG
                     DSSKQVSLDLSDEFTRLLREE"
     gene            1842..2246
                     /locus_tag="VNA10_00340"
     CDS             1842..2246
                     /locus_tag="VNA10_00340"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HVG36157.1"
                     /translation="MTRFTIDIQMRFRDIDGMGHVNNAVYLSYVELARTQFYMHQANK
                     RTLDEIDFILARVEIDFESQATWGDQIQVAVWPSKIGNSSFTLSYEVKEKRSGRILAR
                     AKSVLVSYDYETRKSKPIPDEFRTLLQAALEA"
     gene            2318..3664
                     /locus_tag="VNA10_00345"
     CDS             2318..3664
                     /locus_tag="VNA10_00345"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HVG36158.1"
                     /translation="MAKKEARPPVGTKGAADWYWKRYTELYPKYFWADDTKLADIVVA
                     SAKGSFLYDVEGKEYIDLTSQWATNNLGNVHPEILKATVNALERYGFLILFMNPHLPM
                     IDVAERLLSIRPSENLTRVFLELSGTGAAEGAVKHAIEASGRPLILSFMGQYHGLSIG
                     ATAFGTLASRMRRNWEAFSGGAVHAPYPMTYRKPKGMTDEQFGDWCLGFLEDQILRYV
                     AYPDRIAGAIFEPVALEAGVWIPPKNFVRGLRKLADAHGWFFIADEVEAGLGRTGKMW
                     GIEHFGVAPDLVSVGKALGGGLMPLAAVLGDDRSMGKDDVVAGTTFGGHPAACVAATV
                     TIDILQRDRIPERAARVGGKALKRVKEWEDLSIVGETRGLGLAIGVEIVSDKGTKARD
                     NDTAREVFFDCVRAGVIPLYDYEMNVLRIQPPLTIEEAVLDKALDGMESALRKHGR"
     gene            complement(3661..>4400)
                     /locus_tag="VNA10_00350"
     CDS             complement(3661..>4400)
                     /locus_tag="VNA10_00350"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HVG36159.1"
                     /translation="ADGMERVDSIKVRDGDTASSPDYPFIALFSPETFVEETLAPSRI
                     WRDGKYDSVAPFGEFETYEFPAPIGSLPVYSVDHEEVDTLPRFIGKGVGYVDFKLALD
                     PPTVQTLKLFRDLRLLEPGPPGGPSPRRALFGALPKPADLAGRVDGYAAILVEVAGTK
                     DGHEIVHTIYAMLGHREASKRFGATATAYLTGSGAAAGALLLASGSIREKGKLSPENL
                     DPKPFFPLLRKFGIDVKERLRSERSVA"
BASE COUNT          785 a         1414 c         1475 g          726 t
ORIGIN      
        1 cggccggttg ctctggctcc tcggacaaca ggtccgggat catttcgaag aactctcgcg
       61 gctcgagtcg caaaacgtcg ggaagccgct gcgcgaagcg aaaggcgaca tggcctacgt
      121 ctacaaattg ttcgaatatt atgccgggct ggcagataaa attcaaggcg agacgatccc
      181 cgttcccggt gcgcggttcg attacacggt gcgggagccg ctcggcgtga cggcgcacat
      241 cgctccctgg aactatccgc tcctcctcgc ctcccgcggc gtggcgccgg cgctcgcggc
      301 cggcaacgcg gtcgtcctga aaccggccac gctcaccccg ctcaccgccc tgaaattggg
      361 agagctcgcg ggggcggccg gctttccacc ggggatcgtg aacgtggtca cgggcccggg
      421 tcgtgacgtc ggcggggccc tcgcggcgca tcccgacgtc gactcggtca cattcaccgg
      481 ttcgacggaa acggggaaac aactcctccg cgtcgtcgcg gaccgggtcg tgccgacgac
      541 gctcgagctc ggcggcaaga atccgcagat cgtcctcgcg gatgcgaaac tcgaccgggc
      601 cgtcaaaggc gctctttggg gcgccttcca gaacgcaggc cagatgtgct gggccggatc
      661 gaaactgctc gtccacgaat cgatcgcgcc gtcgttcctc gcgaaactga aagatcaggt
      721 cgagaaactg cgactcgggc cgccactgaa ggacgacgtc cagatgggcc cgctagtctc
      781 gcgggagcac gcgacgaacg tcgtcgccgc gatcgaggat ggaatcggga aaggcgcaaa
      841 gctcctcgca ggaggcagtc ggacggatgc cggcgagatg aaggacggga acttcgtgaa
      901 gccgaccctg ttcgaggatc cgcccgccgc ggcgcgcgtg gcgcgcgagg aggtcttcgg
      961 gcccgtggtg gctgcgtggc gcttcgacga tctcgatgac gcgattgcga gggcgaacga
     1021 cacgccgtac ggtctcgccg cgggcctctg gacgcaggat gtcgcgaagg cacacgcgat
     1081 tgcgcggcga ttgcaggccg gcatggtctc aatcaacgag ttcccggtca ccttcccgca
     1141 gaccccgttc ctcgggtgga agcagtccgg actcggccag gaacagggcg tcgatgccgt
     1201 cctcttctac acccacgtca agaacgtgct cgtgaatctc gagtgacacg atgatctacg
     1261 tcgccccgag cgcggtcctc gtcggcgacg tgaccgtgga ggacgcggcg agtatctggc
     1321 acggcgccgt gctgcgcggc gacttcgact cgatcgtcgt tgcacgcgac tcgaacatcc
     1381 aggacaacgc ggtcgtgcac gtcgatcgtg gcttgcccgc ggtggttggc cgacgcgtga
     1441 ccgtcggcca tgccgcggtc gtccatggtt gctccgtcgg agacgactgt ctcgtcggca
     1501 tgaactcgac gatcaacagc ggcgcggtga tcggttccgg atccgtggtg gcgagcgggg
     1561 ccgtggtgcg ggagaacgcc gaattccccg cggacacctt gttggcggga gtgccggccc
     1621 gaccgattcg aacggtggac gagacgctcc ggcggcggat cgagttgtcg tggtcgattt
     1681 atcgcgagct cgccaaggcc acgcttccga cgcgtcctgc gattcaaggc gattcgtcga
     1741 agcaggtctc gctcgatctc tccgacgaat tcacccggct cctccgcgaa gagtagggac
     1801 cacccaaacg tttttcgtcg gcgttcggca tcgaccgacg gatgacgcgc ttcacgatcg
     1861 acatccagat gcgctttcgc gacattgacg ggatgggcca cgtcaacaac gcggtctacc
     1921 tttcctacgt cgagctcgcg cggacccaat tctacatgca ccaagcgaac aagcggacgc
     1981 tcgacgagat cgacttcatc ctggcccgtg tggagatcga cttcgaatcc caggccacgt
     2041 ggggtgatca gattcaggtg gcggtttggc cctcgaaaat cgggaactcc tcgttcaccc
     2101 tgagctacga ggtcaaggag aaacgaagcg ggcggatcct cgcgcgggcg aagagcgtcc
     2161 tcgtctcgta tgactacgag acacggaagt cgaagccgat tcccgacgaa ttccggacgc
     2221 tcttgcaggc ggccctcgag gcctaacgcg aggttgatcg cgccctcata taccccgccc
     2281 aaagcctcta tgaccggaac gggcgttccc cgcgaggatg gcaaagaagg aggcaaggcc
     2341 tcccgtcggg acgaagggcg cggcagactg gtactggaag cggtacaccg agctgtaccc
     2401 gaagtacttc tgggccgacg acacgaaact cgccgacatc gtggtcgcgt cggcgaaggg
     2461 ctccttcctc tacgacgtcg aaggcaaaga gtacatcgac ctcacgagcc agtgggcgac
     2521 gaacaacctg ggaaacgtcc atccggagat cctgaaggcg accgtcaatg ccctcgagcg
     2581 ctacggcttt ctcatcctct tcatgaatcc gcacctgccc atgatcgacg tcgcggagcg
     2641 actcctctcg attcgtccct cggagaacct gacccgcgtc ttcctcgagc tctccggcac
     2701 cggcgccgcc gaaggcgccg tcaagcatgc gatcgaggcg agtggccggc cgctgatcct
     2761 gagcttcatg ggccagtatc atgggctcag catcggagcc acggcgtttg gaaccctcgc
     2821 atcgcggatg cggcggaact gggaggcctt ctcgggaggc gcggtccacg cgccataccc
     2881 gatgacgtat cgcaagccga aggggatgac cgacgagcag ttcggcgatt ggtgcctcgg
     2941 cttcctggag gaccagatcc tccgatacgt cgcctatccg gatcggatcg ccggggccat
     3001 cttcgagccg gtcgccctgg aggccggcgt ctggatcccc ccgaagaatt tcgtgcgcgg
     3061 acttcgcaag ctcgcggatg cgcacggatg gttcttcatc gcggacgagg tcgaggcggg
     3121 gctcggtcgc accgggaaga tgtgggggat cgagcatttc ggagtcgcgc cggatctcgt
     3181 ctcggtcggc aaggcgctcg ggggaggcct gatgcccctc gccgcggtgc tcggagacga
     3241 ccggtcgatg gggaaggacg acgtcgtcgc ggggaccacc ttcggcggcc atcccgcggc
     3301 ctgcgtggcc gcgacggtca cgatcgacat cctgcagcgc gaccggatcc cggaacgcgc
     3361 ggcccgggtc ggggggaagg ccctgaagcg cgtgaaggaa tgggaagacc tctcaatcgt
     3421 cggcgagacg cggggcctcg gcctcgcgat cggggtcgag atcgtcagcg acaaggggac
     3481 gaaggcccgc gacaacgaca cggcccgcga ggtcttcttc gactgtgttc gcgccggagt
     3541 catcccgctg tacgattacg aaatgaacgt cctccggatt cagccgcccc tgacgatcga
     3601 ggaagccgtg ctggacaaag ccctcgacgg aatggaatcg gcgttgcgga agcacggccg
     3661 ctaggcgacg gaccgctccg agcggagccg ctctttcacg tcgatcccaa atttccggag
     3721 cagcgggaag aacggtttcg ggtcgaggtt ctccggagag agcttgccct tctctcggat
     3781 cgagccgctc gcgaggagga gcgcgccggc ggccgcgccg ctccccgtca ggtaggcggt
     3841 cgccgtcgca ccgaatcgct tcgatgcctc gcggtgaccg agcatcgcgt agatcgtatg
     3901 cacgatctcg tgtccgtcct tcgtgccggc gacctcgacc aggatagcgg catagccgtc
     3961 aacgcgaccg gccaggtccg ccggcttcgg caaggcgccg aacaacgcgc gtcgcgggct
     4021 cgggcctccc ggcggtcccg gctcgaggag gcggaggtcg cggaacagct tcagcgtctg
     4081 gacggtcggc gggtcgaggg cgagcttgaa gtccacgtag cccacgcctt tcccgatgaa
     4141 ccgcgggagc gtgtcgacct cctcgtggtc cacggaatac accggaaggg agccgatcgg
     4201 cgccgggaac tcgtatgtct cgaactcccc gaagggcgcc accgaatcgt acttgccgtc
     4261 gcgccagatc cgggacggtg cgagggtctc ctcgacgaac gtctccgggc tgaagagggc
     4321 gatgaacggg tagtcgggac tcgaggcggt gtcgccgtcc cgcaccttga tcgagtcgac
     4381 gcgctccatc ccgtccgcgg
//
LOCUS       DATLMA010000025         1890 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_546077, whole genome shotgun sequence.
ACCESSION   DATLMA010000025 DATLMA010000000
VERSION     DATLMA010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546077"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..1207
                     /gene="moaA"
                     /locus_tag="VNA10_00355"
     CDS             233..1207
                     /gene="moaA"
                     /locus_tag="VNA10_00355"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006054074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HVG36160.1"
                     /translation="MLVDAFGREVTDIRVSVTKRCNFGCIYCHDEGLGPILKPRMPHE
                     DEMSVAEIERLLRVAREFGIRSVKFTGGEPLIRLDMEAIIDRSVRQLPDVSMTTNGSM
                     LAKRAEALRDAGLKRVNVSIDSLDPAAFRDIRKGELAPVLRGIQEALRVGLKPVKLNM
                     VVFKQTLPHIPRMIEYISNGDGLKLQLIQFMPELVGQQDWMVDIDALKKWLESRADKV
                     LVREMHHRRIYLFNGAEVEVVDPVYNTEFCMNCHRIRVTHQGELKGCLNRNDDLIPTR
                     GLDDDGLREAFRQVVANRVPYYGAYVKEFPRRDSSGAVPIEFPAVPAG"
     gene            1255..>1890
                     /locus_tag="VNA10_00360"
     CDS             1255..>1890
                     /locus_tag="VNA10_00360"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HVG36161.1"
                     /translation="MKVFRGLDVIVAEYKATDQVPTEARAFSGWDQFALWFAAASLPA
                     AWLYGGYMTGAYGLPGAFALIFLVSTLTFIPWALIGYIAADKGASSVSLLRPAFGLRG
                     SKLPSVFYLFFGYGWAAVNVFIAAISASFIFNLTLGWPDAFHTPAGSPINYYLIPSIL
                     LICFLQGFFATAGHRAIRYLNWVSTVALVALGAYATYIVLKDFDFGQLWAWR"
BASE COUNT          339 a          602 c          573 g          376 t
ORIGIN      
        1 tccatgttct cacttctgcc gacacaagcc gccgagtcgc aaaggccgga aaaaccgtca
       61 ccagtcgaat tcagacgttg tgggctgatt gcgccttacg agaccctcct ataaaaacat
      121 tcggaagcgg cggagcgaac catgtgacgg gacgcatcgc agcacgcccc gcgcgaactc
      181 cgtcgctgtc ggcaccatct ttttaccgcg actccacctt cctatgaggc tcatgctcgt
      241 cgacgcattc ggacgcgaag tcacggacat ccgtgtgagc gtcacgaagc gatgtaattt
      301 cgggtgcatc tattgccacg acgaaggcct cggtccgatt ctgaagccgc ggatgcccca
      361 cgaggacgag atgtccgtgg ccgagatcga gcggctcctg cgcgtcgccc gcgagtttgg
      421 gatacggtcg gtgaaattca cgggaggcga accgctcatc cgactggaca tggaagcgat
      481 catcgatcgc tcggtccgcc aacttccgga cgtctcgatg acaacgaacg gctcgatgct
      541 cgcgaaacgc gcggaggccc tccgggacgc gggcctgaaa cgcgtgaacg tttcgatcga
      601 ttcgctcgat cccgcggcat tccgagatat ccgcaagggc gagctcgcgc cggtccttcg
      661 agggatccag gaggcgctgc gggtcggcct caaaccggtc aagctgaaca tggtcgtgtt
      721 caagcagacg ctcccgcaca tcccgcggat gatcgagtac atctccaacg gcgacgggct
      781 caagctccag ctcatccagt tcatgccgga gctcgtcggt caacaggact ggatggtcga
      841 catcgacgct ctcaagaagt ggctggagag tcgggccgac aaagtcctgg tgcgcgagat
      901 gcaccaccgg cggatctacc tcttcaacgg cgccgaggtc gaggtcgtcg acccggtgta
      961 caacacagag ttctgcatga actgccaccg gatccgcgtg acccatcaag gggaattgaa
     1021 agggtgcctg aaccgcaacg acgacttgat cccgacacgt ggcctggatg atgatggcct
     1081 gcgggaagcg tttcgacagg tcgtcgcgaa ccgcgtgccc tattacggcg cctacgtgaa
     1141 ggagttcccg cggcgcgatt cgagtggcgc ggtgccgatt gaattccccg cggtcccggc
     1201 cggctgagcc tctggtcaga atcctcaaat agccctgcgg aatgcgtcgc gtgcgtgaag
     1261 gttttcaggg gtctcgacgt catcgtcgcc gagtacaaag cgaccgacca ggtaccgacc
     1321 gaggcccgcg cgttcagcgg gtgggaccag ttcgccctct ggttcgccgc ggcttcgttg
     1381 ccggcggcgt ggttgtacgg aggctacatg accggcgcgt acggcctgcc cggcgcgttc
     1441 gcgctgatct tcctcgtctc cacgctcacg ttcatcccgt gggccctcat cggctacatc
     1501 gcggcggaca agggcgcgtc gtccgtgtcc ctgctccgac ccgccttcgg cctgcggggg
     1561 agcaagctgc cctccgtctt ctatctgttc ttcgggtacg gctgggccgc ggtgaatgtc
     1621 ttcatcgccg cgatctccgc gtcgttcatt ttcaacctca ccctcggctg gcccgatgcg
     1681 ttccacactc ccgcgggctc cccgattaat tattacctga tcccgtcgat tctcctgatc
     1741 tgctttctgc aagggttctt cgcgaccgca gggcaccggg cgattcgata tctgaactgg
     1801 gtctcgacgg tcgcgctcgt cgctttgggc gcgtacgcaa cgtacattgt gctcaaggat
     1861 tttgacttcg gacaactctg ggcctggcgg
//
LOCUS       DATLMA010000026         1238 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_2407,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000026 DATLMA010000000
VERSION     DATLMA010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2407"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..677
                     /locus_tag="VNA10_00365"
     CDS             234..677
                     /locus_tag="VNA10_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000443934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36162.1"
                     /translation="MEKTIPRRIEVSLRDVAETDLPIFFDFQRDSAANYMAAFTARDP
                     TDREAFAAHWNRILNDDTVLVKTITFDGHVVGSVAKFVDKEFGKPEVTYWIGKEYWGM
                     GLATKALARFLREVTVRPIYGRAAKDNVASIRVLEKCGFTMSGQG"
     gene            complement(768..>1238)
                     /locus_tag="VNA10_00370"
     CDS             complement(768..>1238)
                     /locus_tag="VNA10_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36163.1"
                     /translation="AVFVVGVWFVWGDRARLDSGQRAYLGLAALAFALSFGAAVLRIS
                     LGLFLGFVYAPDLHWVLEAVDVGAAVFLGFTLYWILLGVGIRQARLSGLVALVAGSLS
                     SGLAVLWRTTQNDGIALIGLTAGLMSLTLWMSLFLWGSEELRLRAEDRPPAVPA"
BASE COUNT          273 a          380 c          412 g          173 t
ORIGIN      
        1 tcaacgtcgc gcgcgagcgt caaggccaag ggattggcac ccgcatggtt cggctcatcg
       61 aggagcgggc ccggagcgag ggcaagcgcg ccgtgacgct ggggacgagc cggaacgccg
      121 ccggcgttgc gtggaagtcg ttgccgtggt ggttgtctcg cggctaccac atcaccggcg
      181 aagaagagaa cgagtggacc cgatcgatcg gaccgggtac tcgcgagatt cggatggaga
      241 agacgattcc ccggaggatc gaggtcagcc tgagggatgt cgcggaaacg gatctcccca
      301 tcttcttcga ttttcagcga gattcggccg ccaactacat ggccgcgttc accgcacggg
      361 acccgaccga cagggaggca ttcgccgccc actggaaccg gatcctcaac gacgacacgg
      421 tgctcgtgaa gacaatcacc ttcgacggac acgtggtcgg cagtgtcgcg aagttcgtcg
      481 acaaggaatt cggcaaaccg gaggtcacct actggattgg taaggaatac tgggggatgg
      541 ggctcgccac gaaggccctc gcgagattcc tccgcgaggt gacggtccgc ccgatctacg
      601 gccgcgcggc gaaggacaac gtggcctcga tccgcgtgct ggaaaagtgc ggcttcacga
      661 tgtctggtca aggctaaggg ttcgcgaacg cccgcggtaa agtcgtcgag gaagcggtcc
      721 tggaattggc tgataccccc gcccgatgac cgtggccgac acgaacccta cgcgggcacc
      781 gcgggcggcc tgtcctccgc ccggagtcgc agctcttcgg aaccccagag gaacagggac
      841 atccacaagg tgagggacat gagtcccgcc gtaagcccga tgagggcgat cccgtcgttt
      901 tgtgtcgttc gccagaggac cgccaggccg gagctcagcg agccggcaac gagggcaacg
      961 aggccggaga ggcgagcctg tcgaatcccg accccgagca gaatccagta caacgtgaac
     1021 ccaagaaaga cggcagcgcc cacgtccact gcctcaagga cccaatgaag gtcgggcgcg
     1081 tacacgaatc cgaggaaaag gcccagtgag attcgcagca cggcagctcc gaacgagagg
     1141 gcgaacgcca aagccgcgag accgaggtac gctcgctggc cggagtcgag gcgagcgcga
     1201 tcgccccata cgaaccaaac tccaactacg aagactgc
//
LOCUS       DATLMA010000027         1292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_2426,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000027 DATLMA010000000
VERSION     DATLMA010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2426"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VNA10_00375"
     CDS             complement(<1..352)
                     /locus_tag="VNA10_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010917341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HVG36164.1"
                     /translation="MMPTKKIEEAEEVTRCPECNSGHLSFDYERGELICEECGLVLTD
                     QMIDQGPEWRAFDVEQGEKRARTGAPMTYTIHDKGLSTTIGWKNKDSYGKSIPTRNRA
                     QLYRLRKWQRRIRVS"
     gene            849..>1292
                     /locus_tag="VNA10_00380"
     CDS             849..>1292
                     /locus_tag="VNA10_00380"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36165.1"
                     /translation="MKIVPFEMERWQSTWENSVDYNLSESGVQPIPLRELLRDEPATE
                     RFLDHPLAYSQGNGTQELRSKIADLYRGATPNHVLVTTGSSEANLLAMWHLVEPGDEI
                     VVMLPNYMENWGLVQAFGGTVKPLRLREDRKWQFDPEELSSLVTRK"
BASE COUNT          222 a          411 c          407 g          252 t
ORIGIN      
        1 tgctgacccg gattcgccgc tgccacttcc gcagccgata gagctgggcg cggttgcggg
       61 tcgggatcga tttgccgtag gagtccttgt tcttccaccc gatcgtcgtc gagaggcctt
      121 tgtcgtggat cgtgtacgtc atcggtgccc ccgtgcgcgc gcgtttctcg ccctgctcga
      181 cgtcgaaggc ccgccattcc gggccttggt cgatcatctg gtccgtcagg acgaggccgc
      241 attcctcgca gatcagctcg ccgcgctcgt aatcgaacga caggtggccc gaattgcact
      301 cggggcatct agtgacttct tcggcttctt cgatcttctt tgtcggcatg atctccctca
      361 gcaacgaaca cgtcggctcc aatcaaggac agcgaggcgg ccccggcggg ccgtacggcc
      421 gcgaaaggct cgcggacagg tccgaagacc ttgaccactc ggcccagcgg tcggttccgt
      481 ttgtcccgca cgtcggcgcc tcgcgagggg gcgaactcgg atcggacgag gaccgtcccg
      541 tcgtgggcga tgttctcgac cacgccgagc cgcctcatgc cccctctggt tcggccgctg
      601 gcaatgcgtc cctactattt aacgagagcg gaatttattt gtagcggcac cggcggcaga
      661 gcaggtcgaa accgaggatc caggccgtcg tggcggacgg ggtgacttcg cttcgttaac
      721 ctcatttaag gttgatttgt gttcgattcg cgaatggccc cggacggtct tcggtctcgg
      781 tatgatccga ccaagattgc gcgacgaacc tattaaccgc gtgcctccga tgccgcgagg
      841 ggaaacgcat gaagatcgtc ccgttcgaaa tggagcgatg gcaatcgacc tgggagaact
      901 cggtcgacta caatctctcc gagagcgggg tccagccgat cccgctgcgg gagctccttc
      961 gagacgagcc cgcgaccgag cggttcctgg accatccgct cgcgtactcg cagggcaacg
     1021 gcacgcagga gctccggtcc aagatcgcgg acctgtaccg aggcgcgacg ccgaaccacg
     1081 ttctggtgac gaccggttcg tcggaagcga acctcctcgc gatgtggcac ctcgtcgaac
     1141 cgggggacga gatcgtcgtc atgctgccga actacatgga gaattggggc ctcgtccagg
     1201 ccttcggcgg gaccgtcaaa ccactccgcc ttcgggagga tcggaagtgg cagttcgatc
     1261 cggaggagct cagctcgctc gtcacccgca ag
//
LOCUS       DATLMA010000028         1390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_606711, whole genome shotgun sequence.
ACCESSION   DATLMA010000028 DATLMA010000000
VERSION     DATLMA010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606711"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VNA10_00385"
     CDS             complement(<1..219)
                     /locus_tag="VNA10_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36166.1"
                     /translation="MGSPTDLRLHSDALLRMFTVTEANALVPRLEETFLRLDPKLARL
                     RELRELIEDAESYYGEGLADAPSKDREAY"
     gene            complement(268..1239)
                     /locus_tag="VNA10_00390"
     CDS             complement(268..1239)
                     /locus_tag="VNA10_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012548609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HVG36167.1"
                     /translation="MTALLTTSVGSFPKPDYLMRARTKASKGELSEEGLRALEEKATA
                     EWIQFQEEIGIDIPVDGEQYRGDMATYFAENIDGTEISGLVRSYGNRYYKKPIIVDEL
                     KRKGPISVDWFRFAQARTERPVKGMITGPYTMMDWSFDEFYGSREEACLAFAKLLHQE
                     ALSLEAVGAKIVQVDEPALSTRFDELPLLVKAVGTVTNGLRAKTILHTCYGNYNEIFE
                     FFNKLPVDQLDLEMSNSGLDLLERFKREPLKKEIAFGVVDVHSHVIEPEPLIRERIEK
                     ALTIFEPGKLYIDPDCGLKTRSVEEAQAKLRNMVAATQAVRKAHRLT"
BASE COUNT          221 a          442 c          433 g          294 t
ORIGIN      
        1 gtaggcctcc cggtccttcg aaggtgcgtc ggcgagtcct tcgccgtaat acgactccgc
       61 gtcctcgatc aactcgcgca attcgcgcag tcgggcgagt ttcggatcga gccggaggaa
      121 ggtctcctcg agacgcggca ccaaggcgtt cgcctccgtc accgtgaaca tccgcagcag
      181 cgcatcggag tgcaggcgga gatcggtcgg gcttcccatc ggactcctcg cggtatctat
      241 cgttgacgag aggctttact ctttccccta cgttagccgg tgggctttcc ggacggcttg
      301 cgtcgccgcg accatgttcc gcagcttcgc ctgggcctcc tcgacgctcc gggttttgag
      361 gccgcaatcc gggtcgatgt agagcttgcc cggctcgaag atggtcagcg ccttctcgat
      421 ccgctcgcgg atcaggggct ccggctcgat tacgtggctg tggacgtcca ccacgccgaa
      481 ggcgatctct ttcttgagcg gttcgcgctt gaagcgctcc agcaagtcga gaccggagtt
      541 ggacatctcg aggtcgagct ggtcgacggg cagcttgttg aagaattcga agatctcgtt
      601 atagttccca tagcacgtgt ggaggatcgt cttcgcgcgg agaccgttcg tcaccgtgcc
      661 gacggccttg accagcaacg gcagctcgtc gaagcgcgtc gagagggccg gctcgtcgac
      721 ttggacgatc ttcgccccca cggcttcgag gctcagcgcc tcctgatgga ggagtttcgc
      781 gaaggccagg caggcctcct cgcgggaccc gtagaactcg tcgaacgacc aatccatcat
      841 cgtgtacggt ccggtgatca tccccttgac cggccgctcc gtgcgcgcct gcgcgaacct
      901 gaaccagtcc acgctgatcg gacctttgcg cttcagctcg tcgacgatga tgggcttctt
      961 gtagtaccgg ttgccgtacg agcggacgag accggagatc tccgtcccat cgatgttctc
     1021 ggcgaagtac gtggccatgt cgccgcggta ctgttcgccg tcgaccggga tgtcgatccc
     1081 gatctcctct tggaattgga tccactcggc ggtcgccttc tcctctagcg cgcgaaggcc
     1141 ttcttcggac agctcgccct tggacgcttt cgtccgggcg cgcatcaggt aatcgggttt
     1201 cgggaacgat ccgacgctcg tcgtcaggag ggcggtcatg ccgcgatccc caccttgcgt
     1261 gcggccgtcg acaggatcct gagcttctcg cgagcccggg cgcgaggcag gaactcgagg
     1321 ccgttcgacg gagcgaggaa cgacgtcttc agattgattc ggtccttcag gtccagaacc
     1381 ttctttgcga
//
LOCUS       DATLMA010000029         2371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_665890, whole genome shotgun sequence.
ACCESSION   DATLMA010000029 DATLMA010000000
VERSION     DATLMA010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665890"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1525)
                     /locus_tag="VNA10_00395"
     CDS             complement(<1..1525)
                     /locus_tag="VNA10_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008086237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit B''"
                     /protein_id="HVG36168.1"
                     /translation="MRELIDAFFRERSIVNHHIASFNDFLPTIDNPNSRMQRIVDNLR
                     SSPEDERRGIIKLDEDRTEGDVIEIRIGRKRDDRGRIDLEAKPTITLGLPVVKEANGA
                     THPLNPMEARLRNLNYTAPIYLDFTVIENGIEREPERVHIGNFPIMVKSKRCLLYKEN
                     METEGELTSDEYKRKLIEMGEDPYDPGGYFIIGGTERALISLEDLAPNRVLVEFNERY
                     GRKVEVAKVFSQKEGYRALTLMEKKKDGQLIVSVPTASGQIPLIILMKALGMEKDEDI
                     YNAVVSTPEMANIVYANIEECQNKKVYPPNGIFTRDDAINYLEKKFATGQAKEYRIKK
                     VESILDRSLLPHLGDTREDRIKKAIFLGRVARTVLELSLGMRREDDKDHYANKRLKLA
                     GDLMEDLFRVAFANLVKDLKYQLERSYARRRELKISSAIRPDLLTQRLLHALATGNWV
                     GGRAGVSQLLDRTSNMSALSHLRRVTSPLTRSQPHFEARDLHPTQWGRLCPNETPEGQ
                     "
     gene            complement(1529..1819)
                     /locus_tag="VNA10_00400"
     CDS             complement(1529..1819)
                     /locus_tag="VNA10_00400"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit H"
                     /protein_id="HVG36169.1"
                     /translation="MPGGKRSPREDLPLRFNVLEHQLVPEHRLVPEEEAERVLKAMKI
                     TRDQLPKIRKSDPVIQVLEKIEGPIDEGRIIRVTRVSGTAGVSEAYRLVIGR"
     gene            complement(1841..2007)
                     /locus_tag="VNA10_00405"
     tRNA            complement(join(1841..1854,1888..1909,1941..1957,
                     1987..2007))
                     /locus_tag="VNA10_00405"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1942..1944),aa:Lys,seq:ttt)
     gene            2185..2355
                     /locus_tag="VNA10_00410"
     CDS             2185..2355
                     /locus_tag="VNA10_00410"
                     /inference="COORDINATES: protein motif:HMM:NF011481.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc finger domain-containing protein"
                     /protein_id="HVG36170.1"
                     /translation="MIRAESRCTSCGAVLSGKGTTLFPCPSCGKTKIGRCARCRDQSV
                     GYRCPVCSFTGP"
BASE COUNT          367 a          745 c          751 g          508 t
ORIGIN      
        1 tctggccttc cggcgtctcg ttcgggcaaa ggcggcccca ttgcgtcgga tggaggtcgc
       61 gcgcctcgaa gtgcggctgg gaccgcgtga gcggagacgt gacgcgtcga aggtggctca
      121 acgcgctcat gttcgacgtt cggtcgagca gctggctgac gccggcgcgc ccgccgaccc
      181 agttgcccgt cgcgagggcg tggagcagcc gctgcgtcaa gaggtccggc cggatcgccg
      241 aggagatctt cagctcccgg cgccgcgcgt acgatcgctc cagctggtac ttgagatcct
      301 tcacgaggtt cgcgaaggcg acccggaaca ggtcctccat caggtccccc gcaagcttca
      361 gccgcttgtt cgcgtagtgg tccttgtcgt cttcccggcg catgccgagg gatagctcga
      421 ggaccgtgcg ggcgacgcgg cctaggaaga tcgccttctt gatccggtcc tcgcgggtgt
      481 cgccgaggtg cgggaggagc gaccgatcga ggatcgactc gaccttcttg atccggtatt
      541 ccttcgcctg gcccgtcgcg aacttcttct cgaggtaatt gatggcatcg tcccgcgtga
      601 agatcccgtt cggcgggtag actttcttgt tctggcattc ctcgatgttc gcgtagacga
      661 tgttcgccat ctcgggcgtt gagacgaccg cattgtagat gtcctcgtcc ttctccatgc
      721 ccagggcttt catgaggatg atcagcggga tctgcccgga cgcggtcggc acgctgacga
      781 tcagctgccc gtccttcttc ttctccatca gggtgagggc gcggtacccc tctttctggg
      841 agaagacctt cgcgacctcg accttgcggc cgtagcgttc gttgaactcg acgaggactc
      901 gattcggcgc gaggtcctcg agcgagatca gggcccgctc cgtgccgccg atgatgaagt
      961 agccgcccgg gtcgtacggg tcctcgccca tctcgatgag cttgcgcttg tactcgtcgg
     1021 acgtgagctc cccttccgtc tccatgtttt ccttgtagag gagacaccgt ttcgacttga
     1081 ccatgatcgg gaagttgccg atgtgcacgc gctccggctc ccgttcgatg ccgttctcga
     1141 tgaccgtgaa gtcgaggtag atcggggccg tgtagttcag gttccgcagg cgcgcttcca
     1201 tcgggttgag cgggtgcgtg gccccgttcg cctccttgac gaccggcagg cccagcgtga
     1261 tcgtcggctt cgcctcgagg tcgatccgtc cgcgatcgtc ccgcttccgg ccgatccgga
     1321 tctcgatgac gtcgccttcg gtgcggtcct cgtcgagctt gatgatgccg cggcgttcgt
     1381 cctcggggga cgagcgcagg ttatccacga ttcgttgcat ccgcgaattc ggattgtcga
     1441 tcgtcgggag gaagtcgttg aacgaggcga tgtgatggtt gacgatggag cgttctcgga
     1501 agaacgcatc gatgagttct cgcatgctct acctcccgat gacgaggcga taggcctccg
     1561 acacgcccgc ggtcccgctc acccgcgtga cgcgaataat ccgaccttca tcgatgggcc
     1621 cctcgatctt ctcgaggacc tgaatcacgg gatcgctctt ccgaatcttc gggagctggt
     1681 ctctcgtgat cttcatcgcc ttcaagaccc gctccgcctc ttcctccggc acgaggcgat
     1741 gctctggtac tagctgatgc tccaacacgt taaacctcaa ggggaggtcc tccctgggcg
     1801 accgttttcc acctggcatg ccacgcgcgc gcgagccgta cgggcccgcg gggactttcg
     1861 gggaccccgc gcggtccgca gggcccgttc gaaccccgga ccacccggtt tctttccgtt
     1921 ctccggtgaa gaaggacggc taaaagccgg atgctctttc tagggacggt gttggttcgc
     1981 catcctacct agctgagcta cgggccctcc ggctagcggc ggcgacatgc gaccgtttgc
     2041 caaaacgagc cttcgtatta aagtttgcgg tgcgcgggaa ccccgttggc gggatcggat
     2101 cggagaggcc ataattattc agctcgcacg atatagatgg ctcaggagca caacgattta
     2161 tagacccact tcatcccgcg tttcgtgatc cgcgcggaga gccgctgcac gtcgtgcggc
     2221 gccgtcctat ccggaaaagg cacgacgttg ttcccttgcc cgagctgcgg caaaacgaag
     2281 atcgggcggt gcgcgcgatg ccgcgaccaa tccgtggggt accgatgccc ggtctgttcg
     2341 ttcaccgggc cgtgaggtgc gcgatgggat c
//
LOCUS       DATLMA010000030         2540 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_183486, whole genome shotgun sequence.
ACCESSION   DATLMA010000030 DATLMA010000000
VERSION     DATLMA010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183486"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1090
                     /locus_tag="VNA10_00415"
     CDS             <1..1090
                     /locus_tag="VNA10_00415"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HVG36171.1"
                     /translation="LLRGVADDVPLEEMLSKASAIDAKLTRRDVQIGALLGCVEMIRA
                     GTTSFHDLFYWEDEVARAVRESGMRGFLSWVTLDEAFTTQHGSPLKNADAFVAKQKDD
                     PLVTPSVGVQGVYVASEETYAKAKEIADRRDVRLHTHLSETRGEVEAHRRKTGLRPVE
                     WLEKIGFLGERVTAAHCTWVTMNEVRALARCGVSVAHCPVSNMKLASGGVAPVPEMIE
                     AGVVVGLGTDSPISNNGMDVFADMKVTALLHKATRWDARIMPAQTVLDLATIHAARAL
                     HVEREIGSIEVGKRADLAVVSLKGAHTTPFYPESVIRHLVYSGRGSDVQATIVDGKVL
                     MAGGVVRTVDEVDVIARAQETARELFEA"
     gene            1094..1747
                     /gene="rnhB"
                     /locus_tag="VNA10_00420"
     CDS             1094..1747
                     /gene="rnhB"
                     /locus_tag="VNA10_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008084303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HVG36172.1"
                     /translation="MILGIDEAGRGPVLGPLVVAGVAVESDVALRHMNVRDSKKLSPE
                     KREALAPEIEKCATWDLLVVPAEEIDMMRAEMSLNEFEAKLFAQLIERLHPETAYVDA
                     ADVDEIEFKRCVQRELRFAVEVVSQHNADELFPVVSAASILAKVRRDREMRVIEEEIG
                     EVIGSGYSSDPDTIAFLEKWIKKKGTLPPHTRTSWDTARRLLAESRNRKLDEFGGRS"
     gene            1747..2076
                     /locus_tag="VNA10_00425"
     CDS             1747..2076
                     /locus_tag="VNA10_00425"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HVG36173.1"
                     /translation="MREMLEDLIRKFNAKVASDPALRAELVGLQKTVLIELKDGTKYH
                     FTLADQKVAGLLDGGVDPADITIATDADTLRGLILREIGPFKAYATGKIKLKGSLEDL
                     ARFRKFF"
     gene            2158..2294
                     /locus_tag="VNA10_00430"
     tRNA            join(2158..2196,2226..2247,2281..2294)
                     /locus_tag="VNA10_00430"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2193..2195,aa:Met,seq:cat)
BASE COUNT          465 a          781 c          862 g          432 t
ORIGIN      
        1 gctccttcgc ggcgtcgccg acgacgtccc gctcgaggag atgctctcga aagcctccgc
       61 gatcgatgcg aagctgacac gccgggacgt gcaaatcggc gcgctcctcg gatgcgtcga
      121 gatgatccgg gccgggacga cgagcttcca cgacctgttc tactgggagg acgaggtcgc
      181 ccgggccgtg cgcgaatctg ggatgcgcgg gtttctgtcg tgggtcacgc tcgatgaggc
      241 gttcacgacg cagcacggga gtcccctgaa gaacgccgat gcgttcgtcg cgaaacagaa
      301 ggacgatccg ctcgtcactc catccgtcgg cgtccagggc gtctatgtcg cctcggagga
      361 gacctacgcg aaggcgaagg agatcgctga tcgccgggac gtccggctcc acacgcacct
      421 gtcggagacc cgcggcgagg tcgaggctca ccgcaggaag accggcctcc gacccgtgga
      481 gtggctcgag aagatcgggt tcctcgggga acgggtcacc gccgcgcact gcacctgggt
      541 cacgatgaac gaggtgcggg ccctcgcccg ctgcggcgtg agcgtcgccc attgccccgt
      601 gtccaacatg aaactggcga gcggcggcgt cgcgccggtg ccagagatga tcgaagcggg
      661 cgtcgtcgtc ggcctcggga ccgactcgcc gatctcgaac aacggcatgg acgtcttcgc
      721 ggacatgaag gtcaccgcgc tgctgcacaa agcgacgcgg tgggacgccc ggatcatgcc
      781 ggcgcagacc gtcctcgacc tcgcgacgat ccacgcggcc cgcgcgttac acgtcgaacg
      841 ggaaatcggt tcgatcgagg tcgggaagcg cgcggatctc gcggtcgtct cgttgaaagg
      901 cgcccacaca actccttttt atccggagag cgtcatccgg cacctcgtct acagcggccg
      961 ggggagcgat gtgcaggcga cgattgtcga tggcaaggtc ctcatggccg gcggcgtcgt
     1021 gcgaaccgtc gacgaggtgg acgtcatcgc tcgagcgcaa gagacggccc gcgagctctt
     1081 tgaggcgtga gccgtgatcc tcggcatcga cgaagcgggg agaggcccgg tcctcggtcc
     1141 gctcgtcgtg gccggcgtcg cggtcgagtc ggacgtcgcg ttgcggcata tgaacgtccg
     1201 ggattcgaag aaactttctc cggagaagcg ggaggcgctg gcgcccgaaa tcgagaagtg
     1261 tgcgacgtgg gacctcctcg tggtccccgc ggaggagatc gacatgatgc gcgcggagat
     1321 gtccctgaat gagtttgagg cgaagctctt cgcgcagctc atcgagcggc tgcatccgga
     1381 gaccgcgtac gtcgacgcgg ccgacgtcga cgagatcgag ttcaaacgct gtgtccaacg
     1441 cgagctccgc ttcgccgtcg aggtcgtctc gcagcacaat gccgacgagc tctttccggt
     1501 cgtcagcgcg gcgtcgatct tggcgaaagt ccgccgcgac cgcgagatgc gcgtgatcga
     1561 ggaggagatc ggcgaggtga ttggctcggg gtattcgtcc gatccggaca caattgcgtt
     1621 cttagagaag tggatcaaga aaaaagggac cctgccgccg cacacccgga cgtcgtggga
     1681 cacggcccgg cggttgctcg cggagtcccg aaaccgcaag ctcgacgaat tcggcggtcg
     1741 gtcgtgatgc gggagatgct tgaggacctg attcgcaagt tcaatgcgaa ggtcgcctcc
     1801 gatccagcgc tccgcgcgga gctcgtcggt ctccagaaaa cggtcctgat cgagctgaag
     1861 gacggcacga aatatcactt cacgcttgcg gaccagaagg tcgcgggcct cctcgacggc
     1921 ggcgtcgacc ccgcagatat cacgatcgcg accgatgcgg acacgttgcg cggcctcatc
     1981 ctccgcgaga tcggtccgtt caaggcgtac gcgacgggga aaatcaaact gaagggaagt
     2041 ctcgaggatc tcgcccgttt ccggaaattc ttctgagagg tcgcgcgata ggtttatccg
     2101 acacgttcca atgcggacgg acgaccgccg gcgcgccgtg gctcgatgcg ctgaggtagc
     2161 ggggtggggt agccaggata tcccgtcggg ctcatacccc gggactccca ggtccccggt
     2221 gagacacccg gagatcgatg gttcaaaagg gcggtgagga ccgacctcag gcccggaaag
     2281 tccatccccc gctatcgagt ctcgacgtcg acggcggtcc ttcgtcccgg gccatcgcga
     2341 cgatctcgca agttctgaga aagttaacct tgtttaaggt taacaccggc tctctcccgg
     2401 gaccaaatcc tatggcctga ttctcaggac ggagctttta tgcgtcatgg gccgggtggt
     2461 ccgcgcgctc ggcaggcttt caatggatcg cgtcaagacg ggcgtcgcgg gtctcgacac
     2521 gatgctgaac ggcggcctgt
//
LOCUS       DATLMA010000031         2794 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_726351, whole genome shotgun sequence.
ACCESSION   DATLMA010000031 DATLMA010000000
VERSION     DATLMA010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_726351"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..636
                     /locus_tag="VNA10_00435"
     CDS             214..636
                     /locus_tag="VNA10_00435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36174.1"
                     /translation="MADLWVTVGFLAFFGTITGLLTVTFLAFTRMDKDVRRARMFIME
                     KRIQRFLGAFTIGFIALTVLICASMIALGLPAAIGTGLLVLWLGGMGYGTYELFLIVR
                     PPKGTLLRLIRKSNTGRSVLLEKAAILDRSGRDRDAAK"
     gene            623..1447
                     /locus_tag="VNA10_00440"
     CDS             623..1447
                     /locus_tag="VNA10_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36175.1"
                     /translation="MQRSESRRKAALSNFSDEGIEGQLGKILGEFRRKTNGIRGSVIA
                     DGNGLTVASDIQGAVSSAVLSAMSTLIAQSGARVFENIEMAGPSFIIMDGDQANVAVV
                     QFAAGDVSLLTLVDRSANLGVLKIEMKRTAAKIAEALGIAFGTSTGISELFIITKAGI
                     LIRHYSDTLRTDLDRDILSGMLVAVQDFVKQTLSTKAGNLDELRYGTYTVHFVRGLHT
                     IAAAVAKDMDAEHVKYAVSDALQDFEDRYAGILPTWSGDVSEFKGIDECFEKVLKS"
     gene            complement(1476..1808)
                     /locus_tag="VNA10_00445"
     CDS             complement(1476..1808)
                     /locus_tag="VNA10_00445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36176.1"
                     /translation="MGSSGGSAPLRAEEVVRRFYDFLARGRLVDALNLFTTDARLRDA
                     SGRESAGIRAITSSLLTYRVPQDIAVEQMEPEDGEIRATVRSPSGRSIGRFSVARGRI
                     KSLRMERA"
     gene            complement(1874..>2794)
                     /locus_tag="VNA10_00450"
     CDS             complement(1874..>2794)
                     /locus_tag="VNA10_00450"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HVG36177.1"
                     /translation="GLKAGDTVFLETEPEGSVSIRPRPAEKPQLRRRIFEEKGEERRD
                     HLLRKLIGAYIGGFNYVEIRFRPEMGPFVRRVARDFSRMVIGPEVIEETRNSVVIQDL
                     SDTAELSAEKCLRRMHLIVRAMHEDAIEALRTQDEALARDVAQRDQDVDRLYWMVAKQ
                     YNVAHTTGGTANGAKSELHNYRLIAKLLERIGDHAERIARTYPAFAEGRLEPKLIKEM
                     DAARESATAILDKAFTALLTADIDAANEAVDDLARHQKLIDGLSHHVATRKGEELLAL
                     AAIVDSLARSANYPTDIAEIAIDRAVFQGT"
BASE COUNT          509 a          897 c          881 g          507 t
ORIGIN      
        1 gtgaaggtca agtgccgaaa ctgcggcaac ctcgaagcgg aagacgcgac atattgcagg
       61 aaatgcgggg aacccctcta gctggaggcg acctgatgcc gggtgcaatc cgtccccgag
      121 gccccaccca gcgctagtga caaaagagaa cattcggaac gatagatata tcgctccgaa
      181 ggcggcaatg ggaggccgag cgttcgacaa gctatggcag acctctgggt caccgtcgga
      241 ttcctcgcgt tcttcggcac gatcaccggc cttctgaccg tcacgttcct cgcgttcacg
      301 cgcatggaca aagacgtccg gcgggcgcgc atgttcatca tggaaaagcg catccagcgg
      361 ttcctcggcg cgttcaccat cgggttcatc gcgctgaccg tgctgatctg cgcgtccatg
      421 attgccctgg gcctccccgc ggcgatcgga accgggctct tggtcctctg gttgggcgga
      481 atgggctacg ggacgtacga gctgttcctg atcgtccggc cgccgaaggg cacgctgctc
      541 cggctcatca ggaagtcgaa cacgggccga tccgtgctgc tcgagaaggc cgcgatcctg
      601 gaccgatccg ggagggaccg ggatgcagcg aagtgaatcg cgacggaagg cggccctctc
      661 caacttctcc gacgaaggca tcgaaggaca actcgggaag atcctcggcg aattccgccg
      721 gaagacgaac ggcatccgcg gatccgtgat cgccgacgga aacgggctga cggtggccag
      781 cgacatccag ggcgcggtca gctccgcggt cctctcggcg atgagcacac tgatcgcaca
      841 gtccggcgcg cgggtcttcg agaacattga gatggccggt ccgagcttca tcatcatgga
      901 tggcgatcag gcgaacgtcg cggtcgtcca attcgcggcc ggggacgtga gcctgctcac
      961 gctcgtcgac cggagcgcca acctcggggt gctcaagatc gagatgaaac gcaccgccgc
     1021 gaagatcgcg gaggccttgg gcatcgcgtt cggcacttcc acgggcatct cggaactctt
     1081 catcatcacg aaggccggaa tcctgatccg ccactactcc gacacgctcc gaaccgatct
     1141 cgatcgggac atcctgagcg ggatgctcgt cgccgttcaa gatttcgtga aacaaaccct
     1201 ctcgacgaag gcgggaaatc tcgacgagct tcggtacgga acctacacgg tccacttcgt
     1261 ccggggcttg cacacgatcg ccgccgcggt cgcgaaggac atggacgccg agcacgtgaa
     1321 atacgccgtg agcgacgccc tgcaggactt cgaggaccga tacgcgggga tcctgccaac
     1381 gtggagcggg gacgtcagcg aatttaaggg catcgacgag tgttttgaaa aggtgctcaa
     1441 gtcctgaggc tgcgttccgg ctggccggac gggtcctacg cgcgttccat gcgaagcgat
     1501 ttgatccgtc cccgtgcgac cgagaaccgg ccgatggacc gaccgctcgg cgatcggacg
     1561 gtcgcgcgga tctccccgtc ctccggctcc atctgttcga ccgcgatgtc ctgcggcact
     1621 cgatacgtca acagcgagga ggtgatcgcc cggatcccgg cggactcccg cccggaggcg
     1681 tcgcggagcc tcgcatccgt ggtgaacaag ttgagcgcat cgacgaggcg gcctcgcgcc
     1741 aggaaatcgt agaatcgacg taccacttct tccgcccgga gtggggcgga cccccctgag
     1801 gaacccattg agcaagccac ttcatccgtg ggggacaaac ccttggttcg tattctccgt
     1861 aggcctatgg agattacgta ccctggaaga cggcgcggtc gatcgcgatt tcggcgatgt
     1921 ctgtgggata attcgcgctc cgggcgaggc tgtccacgat tgccgcgaga gcgaggagtt
     1981 cctccccttt gcgcgtcgcg acatggtggg agaggccatc gattagcttc tggtgcctcg
     2041 cgagatcgtc tacggcctcg ttcgcggcgt cgatgtccgc ggtgagcaag gcggtgaacg
     2101 ccttgtccag gatggccgtg gcggactccc gcgcagcgtc catctccttg atcaacttcg
     2161 gttcgagacg cccttccgcg aatgcgggat aagtccgcgc gatgcgctcc gcgtggtctc
     2221 cgatccgctc gagcagcttc gcgatgagcc gatagttatg cagctcgctc ttcgcgccgt
     2281 tcgcggttcc gccggtcgtg tgcgcaacgt tgtactgttt cgcgaccatc cagtagaggc
     2341 gatcgacgtc ctggtcccgc tgggccacgt cccgtgcgag ggcctcatct tgtgtccgca
     2401 acgcctcgat cgcgtcctca tgcatggccc gaacgatgag gtgcatccga cgcaggcact
     2461 tctcggcgct gagctccgcg gtatccgaca ggtcttggat cacgaccgaa ttccgcgtct
     2521 cctcgatgac ctccggcccg atgaccatgc ggctgaagtc cctcgcgacc cgccgcacga
     2581 acggacccat ctccgggcgg aaccgaatct cgacgtagtt gaaaccgccg atgtatgcgc
     2641 cgatcaactt gcggagcaga tggtcccgac gttcctcgcc tttctcctcg aagatgcgcc
     2701 ggcgcagctg cggcttctcc gcgggccgcg gtcggatcga gaccgacccc tccggttccg
     2761 tctcgaggaa aaccgtgtcc ccggccttga ggcc
//
LOCUS       DATLMA010000032         2937 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_546893, whole genome shotgun sequence.
ACCESSION   DATLMA010000032 DATLMA010000000
VERSION     DATLMA010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2937
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546893"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1954)
                     /locus_tag="VNA10_00455"
     CDS             complement(<1..1954)
                     /locus_tag="VNA10_00455"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36178.1"
                     /translation="MADRPMWLNPGLLPGPSLLDLTGENEVAIVGADLSEVEWHKPAH
                     EPAAADAVRLVRLLGLDSDRAAIVSVGDAEVLHAFLRGARRNTPASTEERRALAALCR
                     YLRSQAWMPPHLAAEYGLSAKVTEPPTAVEPEPEPAPREAQEPLPPIEPSLLEISAEP
                     NVGDVPAEPVLDELEDLELSEEDMSLPALPPVPPEPIPHPEPPLPLPQPEPLPGPVPE
                     PEPGPEPEETSVEAWQRAELEESRRALEKERAEADAFVRSRTQDLVSKEELLLARERS
                     VASKEEDVEARARAATERLAALEKDSSRREVLRFLGGIPGMSAAQADVVATAFPDIAS
                     LTAADEKALTQCKGVTDALARAIRLELAPGELEDERRSTRLREEAQAFVAEGTYDAAL
                     ECYDRLLRARPEETSVWFDRAEVLVLLDRPEEALQCYARVLDVDRGNAQATYERANLL
                     FGLGRLPDAADALRDALRLEPSKSRDVVPKAEQLRRDGHPNEAVRLFQAVLEITPDDP
                     RAILGLGDAFVDLGDADAAEAQFTRALGKDPQNAPILFRKGELLERKGRWGAAVQYHN
                     RAIALRWNYPDPWLAKGEILLNHARPAEALECFEKVASFEPQRIEAFAGEARARAALG
                     QRGEAEAALAKAIRLGADHPAVRAARD"
     gene            2175..2633
                     /locus_tag="VNA10_00460"
     CDS             2175..2633
                     /locus_tag="VNA10_00460"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36179.1"
                     /translation="MRRARRADDEVMWQATLQTVWDDIPADERARLNREKWEAHFRKK
                     IEPYMSGDRTERWIAETAAHELLGYLILGESGFVTPEAQGFIYDVWVTPTRRGEGVGK
                     FLVEWASDWARQRGYRKIKLEVSETNARARHVYESLGFRAERRYMGRLLE"
     gene            2696..>2937
                     /locus_tag="VNA10_00465"
     CDS             2696..>2937
                     /locus_tag="VNA10_00465"
                     /inference="COORDINATES: protein motif:HMM:NF013671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HVG36180.1"
                     /translation="MRGSAMIQVTLTETAANKVKELIERSDPETGQPLGSIEDTYLRM
                     YVAGGGCSGFRYGLALDRKIHEDDEVVQVHGLKVLV"
BASE COUNT          514 a          947 c         1001 g          475 t
ORIGIN      
        1 catcgcgtgc cgcacggacg gcgggatggt cggccccgag acggatcgcc ttcgcgaggg
       61 ccgcctccgc ttcgccccgc tggcccaacg cggcacgggc tcgggcctcg ccggcaaacg
      121 cttcgattcg ctgcggctcg aacgacgcca ccttttcgaa gcattcgagg gcctcggccg
      181 gacgagcgtg attcagcagg atctctcctt tcgcgagcca tggatccggg tagttccacc
      241 ggagggcgat cgcgcggttg tgatattgga ccgccgctcc ccaacggccc ttgcgctcga
      301 ggagttcgcc cttccgaaag agaatcgggg cgttctgtgg atccttcccc agcgcgcggg
      361 tgaactgggc ctccgctgcg tccgcatccc cgaggtcgac gaacgcgtcg cccagaccga
      421 ggatcgctcg cgggtcgtcg ggcgtgatct cgaggaccgc ttgaaacaac cggacagcct
      481 cgttcgggtg gccatctcgt cgcagctgct ccgccttcgg aacgacgtct cgcgatttcg
      541 acggctcgag ccggagcgca tcccgcagcg cgtcggccgc atcagggaga cggccgagcc
      601 cgaagagcaa gttcgcccgc tcgtaggtcg cctgagcgtt ccctcgatcc acatcgagga
      661 ctcgcgcata acattggagc gcctcctccg ggcggtcgag gaggaccagg acctcggctc
      721 gatcgaacca gacgctcgtc tcctccgggc gggcccggag caagcggtcg tagcactcca
      781 aggcggcatc gtaggtgccc tccgcgacga atgcctgggc ttcctccctg agacgggtcg
      841 atcgtcgttc atcttcgagc tcgccgggtg ccagctcgag tcgaatcgcc cgggcgagcg
      901 catcggtcac ccctttgcac tgggtgagcg ccttctcgtc cgcggcggtc aacgaggcga
      961 tgtccgggaa cgccgtcgca acgacgtccg cctgggccgc ggacatgccg gggattccac
     1021 cgaggaaccg caggacctct cgtcgggacg agtctttctc caacgcggcg agccgttccg
     1081 tcgcggctcg ggcgcgggcc tcgacgtcct cctccttcga cgcgacggac cgttcgcggg
     1141 cgagcaggag ttcctccttc gagacaagat cctgcgtccg agatcgaacg aacgcgtcgg
     1201 cttcagctcg ctccttctcc agggcccgac gggattcttc gagttccgct cgttgccaag
     1261 cttcgacgga cgtctcttcc ggctcaggtc cgggctccgg ctccggcaca gggccgggca
     1321 gcggttcggg ctgcggaagc gggagtggag gctccggatg agggatgggt tcgggaggga
     1381 cgggcggaag cgcgggcaag gacatgtctt cctcggaaag ctcgaggtcc tccagctcgt
     1441 cgaggaccgg ttcggctggg acgtccccga cattcggttc cgcggaaatc tcgaggagtg
     1501 aaggttcgat tggaggcaac ggttcttgcg cttcccgggg cgccggttct ggctccggct
     1561 cgacggcggt cgggggctca gtcaccttcg cgctgagccc gtattcggcg gcaagatgag
     1621 gaggcatcca cgcttgggac cgcagatatc gacacaaggc cgcgagcgcg cgccgttcct
     1681 ccgtgctcgc gggcgtgtta cgacgggccc cgcgcaggaa tgcatggagg acctccgcgt
     1741 caccgacgct gacgatcgcc gcgcgatcgg aatcgaggcc gagcaaccgc acgagccgga
     1801 ccgcatccgc ggccgcgggt tcgtgggccg gtttgtgcca ttcaacctcc gagaggtcgg
     1861 ctccgacgat ggcgacttcg ttctcgccgg tgagatccag gagcgacggg cctggcagga
     1921 gcccgggatt caaccacatc gggcgatcgg ccacgaggaa atcgaggcag gccgcacaca
     1981 gaaaatcgcg actcacggcg ccgcatcgag cgcagcgcga ggggagcaca agcgcaagaa
     2041 cagccgcggg tcttataaaa gctgggcact gaatgatgac cgcccgaaat tgtttcgggg
     2101 cggtggccgg gaggccgaca ccttcattca ccggagatgg tgtcgcgaaa aggggtctta
     2161 ccgtggacgt ccacatgaga cgggcgcggc gggcggacga cgaggtcatg tggcaagcga
     2221 cgctgcagac cgtttgggac gacattccgg cggacgaacg ggcgcgcctc aatcgcgaga
     2281 agtgggaggc gcatttccgc aagaagattg aaccgtacat gtcaggagac cgcacggagc
     2341 gatggatcgc cgagaccgca gcccacgaac ttctcggcta tctcatcctc ggcgaaagcg
     2401 gcttcgtgac gccggaggcc cagggcttca tctacgatgt ctgggtcacc ccgacccggc
     2461 ggggcgaagg ggtcggcaag ttcctcgtcg agtgggcgag cgactgggcc cgccagcgtg
     2521 gctatcgaaa aatcaagctc gaggtctccg agaccaacgc ccgcgcacgc cacgtctacg
     2581 agagcctcgg attccgcgcg gaacgtcggt acatggggag gctcctcgag tgagccgcac
     2641 gagtcgcgca actggccacc aaagggttaa ataacggcgt catcgtgttc gggagttgcg
     2701 gggtagtgca atgattcagg tcaccctgac ggaaaccgca gcgaacaaag tcaaggagct
     2761 catcgagagg tccgatccgg agaccggcca gccgctgggc tcgatcgaag acacctacct
     2821 ccggatgtac gtcgcgggcg gcggttgctc cggcttccga tacggcctcg cactcgatcg
     2881 gaagatccac gaggacgacg aggtcgtcca agtgcacgga ctcaaggtcc tcgtcga
//
LOCUS       DATLMA010000033         1227 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_183785, whole genome shotgun sequence.
ACCESSION   DATLMA010000033 DATLMA010000000
VERSION     DATLMA010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183785"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /locus_tag="VNA10_00470"
     CDS             complement(<1..1171)
                     /locus_tag="VNA10_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013683844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HVG36181.1"
                     /translation="MGDRIRKRALPFVLHDVALRDASINELAEMSERMGLALSDDEMG
                     RIQEYFRNVGREPTEVELQSLGQAWSEHCCYKSSKVFLKEFIFPVQAPYVIDRGDAGV
                     VEFDEDHAYALRIESHNHPSAIEPYGGANTGIGGILRDVLAMGAQPIALADPLHFGPL
                     DYPMDKLPRGAKHPKYLFGGVVAGIRDYGNRVGVPTVAGCIVFDEGYLGNIVVNVACV
                     GFGKKSQIVRNRVASEKDVFILAGGRTGRDGIHGVTYASVDLTDKAVQGWESGAVQLG
                     DPILKEPLIHACVESAQAGLLDGLKDLGGGGLSCVIGEMALGGGFGSEVDLEKVPLKE
                     EGLAPWEIWVSESQERMMLAVRPENVDGVFRIFNLYDVPATVIGRVIPEKVCRVRY"
BASE COUNT          214 a          417 c          369 g          227 t
ORIGIN      
        1 ggtagcggac gcgacagacc ttctccggaa tcacacgacc gatgacggtc gcgggcacgt
       61 cgtacaggtt gaaaatccgg aagaccccgt cgacgttctc cgggcgcacc gcgagcatca
      121 tccgctcctg gctttcggag acccatatct cccacggcgc gaggccttcc tccttcaagg
      181 gaactttttc gaggtcgacc tcggagccga atcctccgcc aagggccatc tcgccgatta
      241 cgcaggagag accgcccccg ccgagatctt tcaggccgtc gagcaggccc gcttgggctg
      301 attcgacaca tgcgtggatg agcggctcct tcaagatcgg gtcgccaagc tggaccgccc
      361 ccgattccca gccctggacg gccttgtccg tcaagtcgac actcgcgtac gtcacgccgt
      421 ggatcccgtc gcggcccgtg cggcctcccg cgaggatgaa cacgtccttc tccgacgcca
      481 cgcggttccg cacgatctgg gacttcttcc cgaagccgac acatgcgacg ttgacgacga
      541 tgttgccgag gtagccttcg tcgaatacga tgcagcccgc gaccgtcggg acgccgactc
      601 ggttcccgta gtcgcggatg cccgcgacga cgcccccgaa caggtacttc ggatgcttgg
      661 ccccgcgggg cagcttgtcc atcggatagt cgagcgggcc gaaatgcagc gggtccgcga
      721 gggcgatcgg ttgcgcgccc atcgcgagga cgtcccgcaa gatgccgccg atgcccgtgt
      781 tcgcgccgcc gtacggctcg atcgcggacg gatgattgtg actctcgatc cgcaacgcgt
      841 aggcgtggtc ctcgtcgaat tcgacgaccc cggcatcgcc gcggtcgatc acgtacgggg
      901 cctggacggg gaagatgaat tccttgagga acaccttgga ggacttgtag caacagtgtt
      961 ccgaccaggc ctgtccgaga ctctggagct ccacctcggt cggttcgcgg ccgacgtttc
     1021 ggaaatattc ctggatgcgc cccatttcgt cgtcgctcag ggccaaaccc atccgctcgc
     1081 tcatctcggc gagttcgtta atcgacgcgt cacgcaaggc gacgtcgtga agcacgaacg
     1141 ggagggcccg cttccggatt cgatcgccca acccttcgcc tcaactcgga caatcgccgg
     1201 cgatacatta tgcttctcgt ttcgtcg
//
LOCUS       DATLMA010000034         3811 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_485306, whole genome shotgun sequence.
ACCESSION   DATLMA010000034 DATLMA010000000
VERSION     DATLMA010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3811
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485306"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="VNA10_00475"
     CDS             <1..253
                     /locus_tag="VNA10_00475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36182.1"
                     /translation="IWNQPAIVLYPAYGWAFPPAPFNVGRWYDTLLHDPYVQFGEIVG
                     FVSLIAFAWVHGIRSWKTLWDFMGHGTLPSFGPTQLQRD"
     gene            383..1078
                     /locus_tag="VNA10_00480"
     CDS             383..1078
                     /locus_tag="VNA10_00480"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 family protein"
                     /protein_id="HVG36183.1"
                     /translation="MMADASSGGNRGESGSRLAGLCGILFGILVIATFAASYNFPSAP
                     SQADATLAQFSSFRSAFLAGDIFIGLAAVIAIPYFVGLRAAFNGKDRLLVGSATLMGL
                     VGIVVTAAVFIGEAISLDVLSGPYATGGVSKTAAVIVAQAVIGFGTVEVFGFLVFAAG
                     FAVYGFATIRGKPFPRWLGFVGILGAILFLVGSLPVTGAFTAIFAGVILILVWVFATS
                     GLMWRSRTLGAAR"
     gene            1271..2272
                     /locus_tag="VNA10_00485"
     CDS             1271..2272
                     /locus_tag="VNA10_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005248984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36184.1"
                     /translation="MIDEMTMSGWGEVMVTEGRGAEHVVVRRLEEADLPEADRITRIA
                     FGTHLHMPDPAHTFGDVDYVRTRWRADPAAAFAADYEGRLVATEFVTNWGSVGFFGPL
                     TVHPDYWGRGIAQRLLVPTMELFAKWGTTHEGLFTFADSGKHIGLYQKFGFWPRFLTA
                     IMEAPPRKTEGESAASTYSDASKSSRQDLLRTCAGLTDAVYPGLDVRREIQAVDTQSL
                     GDTLLVHEDKRLVAFAVCHCGPGTEGGSGTCYVKFGAVHPGPNAPKTFDTLLDACQDL
                     AASRGLKKVVAGANLAREEAYRAMVARGFRTAFQGVAMERGRPGYNRPGVFVIDDWR"
     gene            complement(2441..2881)
                     /locus_tag="VNA10_00490"
     CDS             complement(2441..2881)
                     /locus_tag="VNA10_00490"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HVG36185.1"
                     /translation="MSVADNIRLLDAGNKALNDHDVERFLSLHLPSVIQRDPQNVEPA
                     KGREAVRAGLEPMIQAFPDFHVVRERAFGEGDWVVEEGQALGTHRGPLETPVGPPIPA
                     TNKSIRLPYAFIAKVEGGKFAETHLYFDVAGMMAQLGLSPQTSP"
     gene            3214..>3811
                     /locus_tag="VNA10_00495"
     CDS             3214..>3811
                     /locus_tag="VNA10_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36186.1"
                     /translation="MAASAHPNRRPLLALILLSPIIAEMLSGSTPPLEWLNPITPLLL
                     IWLYGAGVLVMRETAVRWKTGWPSILLLGAAYGIIEEGLAVKSFFDPGWMDLGTLAWY
                     GRWLDVNWVWAVWLTIYHAVVSIAIPIFLTEWIWPRIRGQPLTSRRGYITAIGLLAGA
                     TVFINLLLTPYRPSVWHLLGAAAAVGFLAWAAKMYAGAL"
BASE COUNT          620 a         1222 c         1202 g          767 t
ORIGIN      
        1 gatctggaat caaccggcca tcgtcctcta tccggcgtat ggatgggcgt tcccgccggc
       61 cccgttcaac gtaggccgat ggtacgacac actgctccac gacccgtacg tccagttcgg
      121 tgaaatcgtc gggttcgtct ccctgattgc cttcgcgtgg gtccacggga tccgctcttg
      181 gaagacgctc tgggatttca tgggccatgg cacgctgcct tcgttcggac ccacccagct
      241 ccagagagat tgaggcccaa gggcgccggc accggcagag gtgtcggttc gagtcgaagg
      301 ggcactcctg agcagcggga gcttcgacgg gtccatgtaa acgcttgagt agtcttccaa
      361 agatgccccg tggggccggg acatgatggc cgacgcatcg tcggggggca atcgagggga
      421 atcgggctcg aggctggccg gcctctgcgg catcctcttt ggcattctcg tgatcgcgac
      481 gttcgccgca tcctacaatt tcccgtcggc gccgtcccag gccgatgcaa ccctcgccca
      541 gttcagctcc ttccggagcg cgttcctcgc cggagacatc ttcatcgggc tcgccgcggt
      601 catcgcgatt ccctacttcg tcgggctgcg ggccgccttc aatggaaagg accggctctt
      661 ggttggcagc gcgaccctca tggggctcgt ggggatcgtc gtcacggcgg cggtgttcat
      721 cggcgaggca atcagcctcg atgtgctctc gggtccgtac gcgacgggag gtgtttcgaa
      781 gacggccgcg gtcatcgtcg cacaagccgt catcggattc ggcaccgtcg aggtgttcgg
      841 cttcctcgtc ttcgccgccg gcttcgccgt gtacgggttt gcgacaatcc ggggaaaacc
      901 atttcctcgc tggctcggct tcgtcgggat cctgggggcc atcctgttcc tcgtcgggtc
      961 gttgcccgtg accggagcat tcactgcaat cttcgcgggg gtcatcctca tcctcgtctg
     1021 ggtcttcgcc acctcgggac tcatgtggag gtcgcggacc ctaggcgcgg cacgttagac
     1081 accgggtttg cgatccgggc cgaggtcctt cagtcaggaa cggcaacagt gttccggcgc
     1141 acggtgcatc cgccgaaccg cggggggtgt cgtcaatatt tgcccttgtc gcgactctcg
     1201 gggcgaaacg tcaaacctgc tggtcctccc ggaagaacga gaatcggtcg cggccgaggg
     1261 cgaccaaatc ttgattgacg agatgacgat gtccggatgg ggcgaggtca tggtcacaga
     1321 gggacgcggg gcggaacatg tcgtggtgcg gcggctcgag gaagcggatt tgcctgaggc
     1381 cgatcggatt acccgaatcg cattcgggac tcacctccac atgccggatc ccgcacatac
     1441 cttcggggac gtggactacg ttcgaacgcg atggcgggcg gatcccgcgg cggccttcgc
     1501 cgcggattat gaggggcgac tcgtcgcgac cgagtttgtc acgaactggg gttccgtcgg
     1561 attcttcggc cctttgaccg tgcatcccga ttactgggga cgggggatcg cgcaacgact
     1621 cctcgtccca acgatggagc tcttcgcgaa atgggggacg acccacgagg ggcttttcac
     1681 cttcgccgac agcgggaaac acatcgggct ctaccagaaa ttcggctttt ggccaaggtt
     1741 cctcaccgcg attatggagg caccgcctcg gaagaccgaa ggagagagcg ccgcgtcgac
     1801 ttattcggat gcgtcgaaga gttcgaggca agatctcttg cggacctgcg ctggactcac
     1861 ggacgcggtg tacccgggcc tcgacgtgcg gcgagagatt caggccgtcg acacgcagtc
     1921 attgggagat accttactcg tccacgaaga caagaggctt gtcgccttcg cggtctgtca
     1981 ctgcggtcct gggacggagg gcgggagcgg gacatgctac gtcaagttcg gtgccgtcca
     2041 tccaggccca aatgctccga agacgtttga cacgttgctc gatgcgtgcc aggatctcgc
     2101 ggcatcgcgt ggactgaaga aggtcgtcgc aggtgcaaat ctggcccgcg aggaagccta
     2161 ccgcgcgatg gtggcccgcg gctttcgaac ggcatttcaa ggcgtcgcga tggaacgagg
     2221 ccggcccggt tacaatcgac cgggcgtgtt cgtgatcgat gattggcgct gagctctcga
     2281 gacccggtgc tgatgcgcac ccggcgatgc gggccttctg cccacggtag cgcgaggacg
     2341 ccccactgcg tcacgcccgt ccgcatccgt aagggttcgg tcggagctgt cgctaagatg
     2401 ctcacagctc ggtccgaaca ccgtgtccgt cacgcctccg ctacggcgac gtttgcggcg
     2461 aaagcccaag ttgggccatc atccccgcca cgtcgaagta gaggtgcgtc tcggcgaact
     2521 tcccgccttc gactttggcg atgaacgcgt acggtagccg gatcgacttg ttcgttgctg
     2581 gaattggtgg ccctactggg gtctccagag gcccccggtg ggtcccgagc gcctgtcctt
     2641 cctcaacgac ccagtcacct tccccgaacg cacgttcccg gacgacatgg aagtccggga
     2701 aggcttggat catcggctca aggcctgcac ggactgcctc ccggcctttc gctggctcta
     2761 cgttctgcgg gtctcgctga atcaccgacg gaaggtggag gctgaggaag cgctccacgt
     2821 cgtgatcgtt gagagccttg ttccccgcat ccagcaaacg gatattgtct gccacactca
     2881 tctcgattca cctcctcctt cgacgaagga cctgggtatt ctaaacacgc ccctcctcgg
     2941 ccccatcccg gtctcgcatt gcggcgcgag cgtatagaca ctccctgcct ccttccggtg
     3001 gagaggccca atctgtgcct tgactccaca ccctcagcga ccgaaagcgt gtacgttcga
     3061 gcagaacgaa cgcgcctgcg gcaaggtcgt cgaccgaagc gacgcgcctt cccccttacg
     3121 cccacccccc gcccacgagg attcggtgcg tgtgtttgtt cccgggaact ttgttcctgc
     3181 ggtttttaag ctaggcgtgg acaacgacgt cccatggccg cctcggccca cccgaaccgg
     3241 cgtcccctcc ttgccctgat cctgctttcg cccatcatcg cggagatgct ctccggatcc
     3301 acaccgccct tggagtggtt gaatccgatc acaccgctcc tcctgatctg gttgtacggc
     3361 gccggcgtcc tcgtgatgcg cgagaccgcg gtccgatgga agaccggatg gccgagcatc
     3421 ttgctcctcg gcgcggcgta cgggatcatc gaagaaggcc ttgcagtgaa gtcgttcttc
     3481 gacccgggct ggatggacct cgggacgctt gcctggtacg gtcgctggct cgacgtgaac
     3541 tgggtgtggg ccgtgtggct cacgatctat catgcggtcg tcagcatcgc gatcccgatc
     3601 tttctgaccg aatggatctg gccccgcatt cgcggccaac cgctcacctc ccgacgcggc
     3661 tacatcaccg cgatcgggtt gctcgcgggc gcgaccgtgt tcatcaacct gctcctcacg
     3721 ccgtaccggc cctcggtctg gcacctcctt ggggccgcgg ccgcggtcgg gttcctcgcg
     3781 tgggccgcga agatgtacgc gggagcgctc t
//
LOCUS       DATLMA010000035         1682 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_847430, whole genome shotgun sequence.
ACCESSION   DATLMA010000035 DATLMA010000000
VERSION     DATLMA010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847430"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VNA10_00500"
     CDS             complement(<1..832)
                     /locus_tag="VNA10_00500"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HVG36187.1"
                     /translation="MKLIRRGVAIALGVLLLVVCLSWNPVRANPAVGIRILFDFGDGT
                     YVWANQTVADPAATNATWLAVANAARANGISIVSTWYPSFGVGILDVGNRHPPAGFVG
                     LYEWNATAHAWDLTPVGISSLVVGERDAIALYDAGFDSHTFDVRQPVPTPDDPKPSVE
                     FRGDLANSGTSSSSVPEAVDPIWDRDTGAREIAATPAVAYGKLFVTTMHGLIALSART
                     GGILWSAPSAPGLSSPAIFDHSVFVGTSNGTVVRLNASDGSVEWETRLLAHTLFSGIT
                     S"
     gene            934..>1682
                     /locus_tag="VNA10_00505"
     CDS             934..>1682
                     /locus_tag="VNA10_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36188.1"
                     /translation="MELLRNLRASTRVLFLYEVTTSRHTRLRTIAERLGMTVQGCSDY
                     AHGLERDGLLSLVDGEYRATKKGVAFLHDGLSDLRGFVERARREMAFIETTAAIAGNA
                     VRGGNQVGLFMEDGMLVAFAGRQSPSSGVAVHDAAKGDLLAVRSLEGIVALRPGRIII
                     GRVPPRGASRRPTPAAATKRVLRQAEDFVVAALDVGGLAAAKELGLKPRIEFGVVSGA
                     VEAAERGLNVLLLAPEERAMEAVQATEAANA"
BASE COUNT          305 a          534 c          567 g          276 t
ORIGIN      
        1 aggaggtgat cccgctgaac agcgtgtggg ccaacaggcg ggtctcccat tccacgctcc
       61 catcggaggc atttaggcgg acgacggtcc cattcgatgt gccgacgaag accgagtgat
      121 cgaaaatcgc cggcgacgag agtcccggag cggatggtgc gctccataga atgccgccgg
      181 tgcgggcact cagcgcgatc agcccgtgca tcgtcgtgac gaacagcttt ccgtacgcca
      241 ccgcgggcgt cgcggcgatc tcccgcgcgc cggtgtcgcg gtcccaaatc gggtcgacgg
      301 cctcggggac cgaggagctc gacgtgccgg agttcgcaag gtccccacgg aattccaccg
      361 aaggcttggg atcgtcgggc gtcggtaccg gctggcgcac atcgaatgtg tgcgagtcga
      421 accccgcgtc gtagagagcg attgcgtccc gctccccgac gacgaggctt gagatcccga
      481 cgggcgtgag atcccaagca tgggccgtcg cgttccattc gtacaggccg acgaaccccg
      541 ccggaggatg gcggttgccc acgtccaaga tcccgacgcc aaaggatggg taccaagtcg
      601 acacgatcga gattccgttc gctcgtgccg cgttcgccac ggcgagccac gtcgcgttcg
      661 ttgctgcggg gtccgccacg gtctgattcg cccatacgta cgtgccatca ccgaagtcga
      721 agaggattcg gattcctacg gccgggttcg cgcggacggg gttccaggaa agacagacca
      781 cgaggaggag cactccgagg gcgatcgcga cccctcgccg aatcaacttc acctgaagct
      841 cctcctcaag tacgtttgat gtttgttcga tgaacttgac tatataagaa tgttggcgcg
      901 ggcttaattc gcggccgcgc aatgcaatcc gcaatggaac tgctgaggaa tctccgggcc
      961 agcacacgcg tcctctttct ctacgaagtc accacgagtc gacacacgcg gcttcggacg
     1021 atcgcggagc gacttgggat gacggtccag ggatgctcgg actacgccca cggcctcgag
     1081 cgagatggac tcctgtccct ggtcgacgga gaataccgag ccacgaagaa aggcgtcgcg
     1141 ttcctgcacg acgggctgag cgacctccgg ggttttgtgg agcgagcgcg tcgcgagatg
     1201 gcgttcatcg agaccaccgc ggcgatcgcc ggaaacgcgg tccgcggcgg gaaccaggtc
     1261 ggcttgttca tggaggacgg gatgttggtc gccttcgcag gccgccagtc gccctcttct
     1321 ggcgtggcgg tccatgatgc ggcgaaaggg gacctcctcg cagtccgcag cctcgaaggg
     1381 attgtcgccc ttcggccggg acgaatcatc atcgggcgcg tgccgccccg gggagcgagc
     1441 cggcggccca cgcccgcggc ggcgacgaag cgggtgctgc gacaggcaga ggacttcgtc
     1501 gttgccgccc tcgacgtggg tggcctcgcc gccgcgaagg aactgggact gaagccgcga
     1561 atcgaattcg gtgtcgtgtc cggggccgtc gaggccgccg aacgcggtct gaacgtcctc
     1621 ctcctcgccc ccgaagagcg cgccatggag gccgtgcagg caaccgaggc tgcgaacgcg
     1681 aa
//
LOCUS       DATLMA010000036         1726 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_305051, whole genome shotgun sequence.
ACCESSION   DATLMA010000036 DATLMA010000000
VERSION     DATLMA010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305051"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VNA10_00510"
     CDS             complement(<1..251)
                     /locus_tag="VNA10_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36189.1"
                     /translation="MVTDVGHAQRVIIGTRDAESSGGVLTEVGLVAWRSLVKLTRTPV
                     LLFFSLFMPLIWLVMFSQTFGTVFSSATSGGFPGGPAATP"
     gene            complement(253..1332)
                     /locus_tag="VNA10_00515"
     CDS             complement(253..1332)
                     /locus_tag="VNA10_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014642976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HVG36190.1"
                     /translation="MPEAASTRPASERSVRATRSSAGSLIKVDHLVKVYGGRGQEEVK
                     AVSDVSFSVGEGEFFGFLGPNGAGKTTVIRIITTLLAKTSGSIHVAGLDVDRDGAEIR
                     RIIGYTGQSIGVDGELTGRENLWLIGRLYHMPNSLVEERVEELLEVLQLKDAADRRAY
                     TYSGGMRRRLDLGAGLVHHPRILFLDEPTTGLDPQTRAAVWEYLRRLHREENMTIFLT
                     TQYMEEADQLCQRIAIIDLGKIVAEGSPAELKAAIGADIITVRITRDEAFAQSRDRAL
                     EIARTIPGVSRATIFDEGVSAYTADGGATLLEVLRRLDAEKVPVHQVALAHPTLDEVF
                     LQHTGRQMRVEEVKPMSRSFGRRRR"
     gene            1437..>1726
                     /locus_tag="VNA10_00520"
     CDS             1437..>1726
                     /locus_tag="VNA10_00520"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HVG36191.1"
                     /translation="MRSASRRAAIEETFRTLRHVMGQLQGCMRATFAEEGMSFGQMVL
                     LRVLVHKGRATPKDLAEALSVTTGNITGLVDKLEKAGLVTRTRSAEDRRVVYV"
BASE COUNT          303 a          559 c          547 g          317 t
ORIGIN      
        1 ggcgtggctg cggggccacc ggggaaacct ccgctggtgg ccgacgaaaa gaccgtgccg
       61 aaggtctgac tgaacatgac gagccaaatc agcggcatga acaggctgaa gaacagcagg
      121 accggggttc tcgtgagctt caccaggctc cgccacgcga cgaggcccac ctcggtgagg
      181 acgccgccgc tcgattctgc atctcgtgtc ccgatgatga ccctctgtgc atgtccaacg
      241 tccgtgacca tgctatcgcc tccgccttcc gaatgaacgc gacatcggtt tcacttcctc
      301 gacgcgcatc tgccgccccg tgtgttgcag gaagacctcg tcgagcgtag gatgtgcgag
      361 cgcgacctga tggaccggga ccttctccgc gtcgagtcgg cgcaggacct cgaggagggt
      421 cgcgcctccg tccgcggtgt aggcgctcac gccctcgtca aagatcgtcg cgcggctcac
      481 accgggaatc gtccgtgcga tctcaagagc ccggtcccga ctctgtgcga acgcctcgtc
      541 gcgggtgatc cggaccgtga tgatgtccgc gccaatcgcg gccttcaact ccgcaggact
      601 tccctcggcg acgatcttgc ccaggtcgat gatcgcgatg cgctggcaga gctggtccgc
      661 ctcttccatg tactgggtcg tcaggaagat cgtcatgttc tcctcccggt gaaggcggcg
      721 cagatactcc cacaccgcgg cgcgcgtctg cgggtcgagg ccggtggtgg gctcgtcgag
      781 gaacaggatt cgagggtgat gtaccaggcc tgcgcccagg tccagtctcc ggcgcatccc
      841 gcccgagtac gtgtacgcgc ggcggtctgc ggcgtccttc aattgcaaga cctcgagcag
      901 ctcctcgacg cgctcctcga cgagcgagtt gggcatgtgg tagagccggc cgatgagcca
      961 gaggttctcg cgtccggtga gttccccatc gacgccgatc gattgccccg tgtagccgat
     1021 gatgcgtcgg atctccgctc cgtcccgatc gacatcgagg cccgcgacgt ggatcgagcc
     1081 gctcgtcttc gcgaggagcg tcgtgatgat ccggatgacc gtcgtcttgc ccgccccgtt
     1141 gggcccgagg aaaccgaaga actcgccctc gccgacggag aaactgacgt cggacaccgc
     1201 cttcacttct tcttggcctc ggcccccgta caccttgacg aggtgatcga ccttgatgag
     1261 agaccccgcc gaagatcgcg ttgcacgaac cgatctctcg ctggcgggcc gggttgaagc
     1321 ggcttcgggc atcgtaccgc ccccaatgat ctgcgggcta aatagtttgg cgttaagata
     1381 ctcgtcacta agcgaatccg aaggttctta tcaaggcggg tgattacgcg agtgcggtga
     1441 gatccgcttc gcgccgagcc gcaatcgagg agacgttccg gaccctgcgc cacgtcatgg
     1501 gccagcttca aggctgcatg cgagcgacgt tcgcagagga gggcatgtcc ttcggccaaa
     1561 tggtcctcct aagagtcctc gttcacaaag gtcgggcgac tccgaaggac ctcgcggagg
     1621 ccctgagcgt cacgaccggc aatatcaccg ggcttgtcga caagctagag aaggccgggc
     1681 tagtcacccg gactcggagc gcggaggacc gtcgcgtcgt ctacgt
//
LOCUS       DATLMA010000037         1234 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_666630, whole genome shotgun sequence.
ACCESSION   DATLMA010000037 DATLMA010000000
VERSION     DATLMA010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666630"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..941
                     /locus_tag="VNA10_00525"
     CDS             21..941
                     /locus_tag="VNA10_00525"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HVG36192.1"
                     /translation="MLSSIDLSKERDTVVMTELDFPSVRYAYSEMAKRLGARVVSVRS
                     DDGLTIDRDRLLDAIDERTRLVAVSHVLFRSAFLMDADEICRHAHDVGALVSLDSFHA
                     VGIVPVDVKRSKPDFLTGGVLKWLCGGPGGCFLYVSPTVRDQLKPALTGWQAHSRPFA
                     FEDSMEYTTGAFRWLNGTPVIPALYAAAEGPKILRRAGVAAIREKSVRLTSRLIDLAD
                     ARGYTVNAPRDPARRGGTVAIDVPHGYEVTQHLLSRNILVDYRVGAGIRIAPHFFTRE
                     DELDEAVSEIDKALESGSWQRFSEKIAVVT"
     gene            1032..>1234
                     /locus_tag="VNA10_00530"
     CDS             1032..>1234
                     /locus_tag="VNA10_00530"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36193.1"
                     /translation="MPTPFLSSEEYDERAHQLYNEGQYDEALDVLREGLGLYPNSVEL
                     HIGVGYAHHAREDYAWARRSFEEA"
BASE COUNT          249 a          369 c          376 g          240 t
ORIGIN      
        1 ccaccatcgc gcagacggcc gtgctctcgt ccatcgactt atcaaaggag cgcgataccg
       61 tcgtgatgac ggagctcgat tttccgtccg tccgctacgc gtactcggaa atggcgaagc
      121 ggctcggcgc gcgcgtcgta tccgtgaggt cggacgacgg attgacgatc gatcgcgaca
      181 ggctgttgga cgcaatcgac gaaaggaccc gcctcgtggc cgtctcccac gtgctctttc
      241 ggagcgcctt cctaatggat gcggacgaga tctgcaggca cgcgcacgac gtcggcgcgc
      301 tcgtctcgct cgattctttc cacgctgtcg ggatcgtacc ggttgacgtg aaacggagca
      361 agccggattt tcttaccggt ggagttctca aatggctctg cggaggtccc ggtggctgct
      421 tcctttacgt gagtccgacc gtccgcgacc aactcaaacc tgccctgaca ggctggcagg
      481 cgcactcgcg tccgttcgca ttcgaagatt ccatggagta caccaccggg gcgttccgct
      541 ggctgaacgg tacgccggtg attccggcac tctacgccgc cgcggaaggg ccgaagattc
      601 tgcgccgagc cggagtcgcc gccatcagag aaaagagcgt ccgcctcacc tcacggctga
      661 tcgacctggc cgacgcccgc ggctacaccg tgaatgcgcc gcgggacccc gcgcgtcgtg
      721 gcgggacggt ggcaatcgat gttccgcacg gatatgaggt cacgcaacac ctgctgtcgc
      781 ggaacatcct ggtcgactac cgcgtgggcg ctggtatcag gattgcccct cacttcttca
      841 ccagggagga cgagctcgac gaagccgttt cggagatcga caaggctctc gaaagcggaa
      901 gctggcagcg cttctcggaa aaaatcgcgg tcgtcacctg agccgttcag gcgggatgtt
      961 actaccttga acaatgcagt gtctaaagag tacaatagac ttatactcga ctcctcggag
     1021 ggtgcgtagg tatgccaaca ccttttttga gttctgaaga gtacgacgag agagcgcatc
     1081 aactgtacaa tgaaggacag tatgacgagg ctctggacgt acttagagaa ggactcggtc
     1141 tatatccgaa ctctgtggag ctccatatag gggttggcta cgcccaccac gctcgcgagg
     1201 actacgcgtg ggcacgacgc agcttcgagg aagc
//
LOCUS       DATLMA010000038         3236 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_787658, whole genome shotgun sequence.
ACCESSION   DATLMA010000038 DATLMA010000000
VERSION     DATLMA010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787658"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1803)
                     /locus_tag="VNA10_00535"
     CDS             complement(34..1803)
                     /locus_tag="VNA10_00535"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018194212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HVG36194.1"
                     /translation="MQFARVVDVYEKIAATTKRLEMTELLVGLLRDTPKEDLDKIVYL
                     TQGRIHPDYEGIELGLAEKMVMRVLAHATGLDDARVGRLWKERGDLGLVAQEAIAARR
                     QKPLESTPLTTAKVYQHLDAIARESGEGSQERKIRLLSDLLGNATPREAKYIIRMVVG
                     QMRLGVADMTIVDALAGAFATKADRSRVERAYNVCSDLGEVARVLSSQGVDGLTEIHL
                     RLFRPIRAMLAERLETLEEIFKRMGKAALEYKYDGLRVQAHVSPKRIQLFSRHLENIT
                     EQFPEIVDALRSAITDRATIVEGEAVPVDPNTGEFLPFQEVSRRRGRKTEVERMAREF
                     PVTLFAFDCLLRSDEDLTARPYHERRKALEAVAKPNDGIRYSTVRVTEDVKQAEAFFD
                     QALQAGCEGLMAKALDSTYDAGARGFKWIKFKKEYSAALSDTIDLVVVGAFAGRGKRA
                     GTYGALLMAAYDDEADVFRTTCKLGTGFDDETLFALPEKFKAVRRDRKPARVDAKLEP
                     DVWFEPQVVLEVRGAEITVSPIHTCAWDVLRPGAGLAIRFPRFTGRWRDDKGSEDATT
                     ARELVEMYRLQLKQTKKEPVRSA"
     gene            complement(1885..3228)
                     /gene="purB"
                     /locus_tag="VNA10_00540"
     CDS             complement(1885..3228)
                     /gene="purB"
                     /locus_tag="VNA10_00540"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008441290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HVG36195.1"
                     /translation="MSLLCPIDFRYGRPKMKGIFEEESRLQRLLEVEAALARAEAKVG
                     LIPEPAAAEITKKATTKRVTVERVQEIEEETRHDLMAVVLALTEACDGEAGKYVHVGA
                     TSNDILDTATALQLRDAIRIVGEDLIELTNVFAGLASKHKRTVMLGRTHGQAAIPITF
                     GLKMAVFASDVARHSDRLREATPRIVVGKMSGAVGTGAAFGPYALDIQPAVMRDLGLG
                     VEEAATQVVGRDRYAEFIAILANIAASLEKFCTEVRNLQRTEVGEVAEAFETKKQVGS
                     STMAQKENPVASENVCSLSRIVRSLVTPALENVPLWHERDLTNSAAERIILPHACVLI
                     DEMLARTSEIFRTLRVYPDRMKVNLEATKGQVMAEAVMIALVSKGIGRQEAHKLVRET
                     AQKARANDVHLRDALLAEPKVTKLLSKREIDSAMDPNAYLGESFAIVDAVVKRVR"
BASE COUNT          514 a         1099 c          987 g          636 t
ORIGIN      
        1 gtcacgagct tcgcaaagac gggacgattc gccctaggct gaccgcacag gctctttctt
       61 cgtctgcttc aactgcagcc gatacatctc gaccaactct cttgccgtcg tcgcatcctc
      121 ggaacctttg tcgtcccgcc accgtccggt gaatcgaggg aagcggattg cgagacccgc
      181 tccgggacgg agcacatccc aggcgcacgt gtggatcggg ctcaccgtga tttcggcgcc
      241 tcgcacttcg aggacgacct gaggttcgaa ccagacatcg ggctcgagct tcgcgtcgac
      301 ccgcgcaggc ttgcggtctc gtctgaccgc tttgaacttc tccgggaggg cgaacagcgt
      361 ctcgtcgtcg aagcctgtgc cgagcttgca ggtggtccga aagacgtccg cttcgtcatc
      421 gtatgccgcc atgaggagcg ccccgtaggt gcccgcccgc ttgcctcgcc ccgcgaatgc
      481 cccaacgacc accaggtcga tcgtgtcgct caacgccgcg ctgtactctt tcttgaattt
      541 gatccacttg aatccgcgcg cgcccgcgtc atatgtcgag tcgagcgcct tcgccatgag
      601 tccttcacac ccggcctgga gggcctgatc gaaaaacgcc tcggcttgct tcacgtcctc
      661 ggtcacacgg acggtcgagt accgaatccc gtcgttcggc ttggcgacgg cttcgagggc
      721 cttccgtcgt tcgtgatacg gccgcgcggt caggtcttcg tcggaacgga gcaggcagtc
      781 gaacgcgaac agggtgaccg gaaattccct cgccatccgc tcgacctccg tcttccgtcc
      841 tcggcggcgg ctcacttcct gaaacggaag gaactctccg gtattcgggt cgaccgggac
      901 ggcctcgccc tccacgatgg tcgcacgatc cgtgatcgcg gatcgcagcg cgtcgacgat
      961 ttcggggaac tgctctgtga tgttctcaag atgacgggag aaaagttgaa tcctctttgg
     1021 agagacgtgt gcctgcacgc gcagcccgtc gtacttgtac tcgagcgcgg ccttccccat
     1081 ccgcttgaag atctcctcga gcgtctcgag gcgttccgcg agcatcgccc ggatcgggcg
     1141 gaagagcctc aagtggatct ccgtcagtcc gtcgacgccc tgggacgaca aaacccgcgc
     1201 gacctcgccg aggtccgagc acacattgta cgcccgctcg acgcgggatc ggtcggcctt
     1261 ggtagcgaac gctcccgcga gcgcatcgac gatggtcata tccgccaccc cgagccgcat
     1321 ctggccgaca accatccgga tgatgtactt cgcctcccgc ggtgtcgcgt tgcccagcag
     1381 gtcggacagg aggcggatct tccgctcctg acttccttca ccggattccc gggcaatggc
     1441 gtcgaggtgc tggtagacct tcgcggtcgt gagcggcgtc gactccaaag gcttctgtcg
     1501 acgcgcggcg atcgcttctt gtgcgacgag gccgagatct cctcgttcct tccagagacg
     1561 gccgacgcgt gcgtcgtcaa ggccggtcgc gtgggcgagg acacgcatca ccatcttctc
     1621 cgcgagaccg agctcgattc cctcgtagtc ggggtggatg cgaccttgcg tgaggtagac
     1681 gatcttgtcg aggtcctcct tcggcgtgtc ccgaaggagg ccgacaagta gctccgtcat
     1741 ctcgagccgc ttcgtcgttg ccgcaatctt ctcgtatacg tccacgaccc gagcgaactg
     1801 catcgagccg acggatgctc ccgacgcttc ttaaggattc tcggagcggt gcgcgctgca
     1861 ccgcgaattc actccgttga cccttcagcg gacgcgcttc acgaccgcgt cgacgatcgc
     1921 gaagctctcg ccgaggtacg cgttcggatc catcgccgag tcgatctctc gcttcgatag
     1981 aagtttcgtg accttcggct cggcgagcaa tgcgtcccgt aggtggacat cgttcgcccg
     2041 cgccttctgc gcagtctcgc gcacgagctt gtgcgcttcc tgtcgcccga ttcccttcga
     2101 gacaagcgca atcatcaccg cttcggccat gacctggcct ttcgtcgcct cgaggttcac
     2161 cttcatccgg tccggataga cgcgcagcgt gcggaagatc tccgaggtcc gagcgagcat
     2221 ctcgtcgatc aggacgcacg catgggggag gatgatccgc tccgccgcgc tgttcgtcag
     2281 gtcgcgctcg tgccagaggg gaacgttctc caaggcgggc gtcacaagcg accggacgat
     2341 tcgggagagc gagcagacgt tctccgaggc gaccgggttc tccttttggg ccatcgtgga
     2401 gctcccgacc tgcttcttcg tctcgaatgc ttcggcgacc tcgccgacct ccgtgcgctg
     2461 cagattccgg acctcggtgc agaacttctc gagagacgcc gcgatgttcg cgaggatggc
     2521 gatgaactcc gcataccgat cgcggccaac gacctgggtc gccgcttctt ccacaccgag
     2581 gccgaggtcc cgcatgaccg ccggctggat gtcgagggca tacggcccga acgcggcgcc
     2641 cgtcccgacg gccccggaca tcttgccgac gacgatccgc ggggtcgcct cccgtagccg
     2701 gtcgctgtgg cgggcgacgt cggaggcgaa gaccgccatc ttgagtccga acgtgatcgg
     2761 gatggcagct tgcccgtgcg tccgacccag catcacggtc cgcttgtgtt tcgacgccag
     2821 gcccgcgaag acattcgtga gttcgatcag gtcttcgccc acgatacgga tcgcgtcccg
     2881 gagctggagc gccgtcgcgg tgtcgaggat gtcgttgctc gtcgcgccga cgtggacgta
     2941 ttttcccgcc tcgccgtcgc atgcctcggt cagggcgagg acgacggcca tcaagtcgtg
     3001 acgcgtctcc tcctcgatct cctgcacgcg ctcgaccgtc acccgcttcg tcgtggcctt
     3061 cttcgtgatc tcggccgccg cgggctcggg gatcaacccg accttcgcct ccgcgcgggc
     3121 gagcgccgcc tcgacctcga gcaggcgctg gaggcgcgac tcttcctcga agatcccctt
     3181 catcttcggc cgaccgtagc ggaagtcgat ggggcacagc agcgacatgg ctaccg
//
LOCUS       DATLMA010000039         1349 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_245020, whole genome shotgun sequence.
ACCESSION   DATLMA010000039 DATLMA010000000
VERSION     DATLMA010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245020"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..678)
                     /locus_tag="VNA10_00545"
     CDS             complement(73..678)
                     /locus_tag="VNA10_00545"
                     /inference="COORDINATES: protein motif:HMM:NF039705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HVO_0476 family zinc finger protein"
                     /protein_id="HVG36196.1"
                     /translation="MAAPSALVLKCEACGAEAPHRVLRGKIGGKDEIVFEGTVKCPNC
                     GRVSTVVTREPKPIEIPLIVSWLDKSERTSLEFSPEENVSVGEELDLGDSRIEVTAVE
                     AGGRRVAAARAKEVATVWAKRIDRVRVKFSVNKGNRTVPHEVLAAPDEEFEIGEIVDL
                     GRGRAVVHHIRTRQRTVRYGRVRADEIVRMYGRVVRERISR"
     gene            complement(720..>1349)
                     /locus_tag="VNA10_00550"
     CDS             complement(720..>1349)
                     /locus_tag="VNA10_00550"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HVG36197.1"
                     /translation="HIFLNLLGLILISPPLEDRIGSLRWAIVYFVGGAAGALVFLLVH
                     LGVAVLLVGASAGIFAAFGAYGRLYPRDRIALFLPIPGVPSFRVIEVVVIFLALEGLL
                     GFLGPLGIAWEAHVGALVFGFATAPFFMRLPLRGGRGRLVSVHALEDLATSPELQRIF
                     HEAERADLPETRDAWIESFVRAARCPRCDGRLRRRFGRITSDCGWRRRL"
BASE COUNT          254 a          465 c          418 g          212 t
ORIGIN      
        1 catccctctg ccgacgataa cgctttgcct cgaaaccacc accggtcgaa gacggatcta
       61 ccatccgctc gctcaccggg aaatccgctc gcgaacgacg cgtccgtaca tcctgacgat
      121 ctcatccgct cggacgcggc cgtagcggac cgttcgctgc cgggtgcgga tgtggtggac
      181 gaccgcccgg ccccttccga ggtctacgat ttccccgatc tcgaactcct cgtccggggc
      241 cgcaaggact tcgtgcggca ccgtccggtt ccctttattc acggagaact tgacgcgtac
      301 ccgatcgatc cgtttcgccc agaccgtggc tacctctttc gcccgcgcgg ccgccacccg
      361 ccggcctccc gcctccaccg cggtgacctc gattcgggaa tctccgaggt cgagttcctc
      421 cccgaccgag acgttctcct ctggggagaa ttcgagggat gttcgttcgg atttgtcgag
      481 ccaggacacg atgagcggga tctcgattgg cttcggctcc cgggtgacga ccgtcgagac
      541 gcggccgcag ttcggacatt tcaccgttcc ctcgaagacg atctcgtctt tgccgccgat
      601 cttccctctc agcacccggt ggggagcttc tgctccgcac gcttcacact tcaggacgag
      661 ggcactcgga gcggccacga tgcgtcgaac gcgaggatag agaaaaggat ttgcggtccc
      721 tacagacgtc gacgccatcc gcagtcgctg gtgatccggc cgaaccgccg tcgcaatcgg
      781 ccgtcgcatc gaggacatcg ggcggcccgg acgaacgatt cgatccaggc gtcccgggtt
      841 tccggcagat ccgcgcgttc cgcctcatgg aagatgcgtt gcagttcggg ggacgtcgcc
      901 aggtcctcca aagcatggac cgagacgagt cgtccacgac cgccccgcaa cgggaggcgc
      961 atgaagaacg gcgccgtcgc gaagccgaac acgagcgctc cgacgtgcgc ctcccaggcg
     1021 atgccgaggg gcccgaggaa cccgagcaga ccctcgaggg cgaggaagat cacgacgacc
     1081 tcgatgacgc ggaaggaagg gaccccaggg atcggcagga acaaggcaat ccggtcgcgc
     1141 gggtagagcc gcccgtacgc gccgaaggcc gcgaagattc cggccgacgc gccgacgagc
     1201 aggaccgcaa cccccaagtg cacgagcagg aagacgagcg cccctgccgc cccgccgacg
     1261 aagtacacga tcgcccatct caggctcccg atccgatcct ccaagggggg cgagatcaga
     1321 atgagtccga ggaggttcag gaagatgtg
//
LOCUS       DATLMA010000040         1908 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_608312, whole genome shotgun sequence.
ACCESSION   DATLMA010000040 DATLMA010000000
VERSION     DATLMA010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_608312"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /locus_tag="VNA10_00555"
     CDS             <1..1135
                     /locus_tag="VNA10_00555"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG36198.1"
                     /translation="RRATLAEELSGLRSKLEAMATQTTFLEERRTEVGSHLTALDGQR
                     KDHEKRIETFQDSLGHLETEIRGLEKTEAQMGKKVKDLQDARDAAYKEKTDREADLDK
                     VTHKIETKEDFLLKMETELKVQEEQLAEAERIMKEMAVELQEGRLPSLEELKTTIADC
                     EAAINALGPINLRALEDYDAQQSRAVELKDEFKRLEGQREELIHLVDELTDKKKEGLA
                     KIFTSINENFSRVYAELTEGGEAELALENPEKPFEAGLTLKVKPAHKKALRLEALSGG
                     ERSLASMALIFAIQEYDPSPFYLLDEIDQNLDAVNAEKVARMIRRNSSTAQFVQISLR
                     KVSLKEADHLVGVTMTPDSLSEVIMRVNLADIEDEKPTEVIPA"
     gene            1132..>1908
                     /locus_tag="VNA10_00560"
     CDS             1132..>1908
                     /locus_tag="VNA10_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36199.1"
                     /translation="MSENYQAILNHLLFHKALISETEGGERINRYLAMLNEIDQGMHV
                     AVRDPFEKSVVAAFELALERRLDPWEINLVPFTKLFLDKVKKDGAVNFVTAGKLVFLA
                     WSILKMQSDKVLLDAMPPEPEADVGGWDPDMFRDPADLDYNQVVLAGTATPLTEAIRR
                     EGRRAVTLMELMDAFDEARRESEIQLQLNALREQAIRKFAPNFHRKVHGEDLTDDIAL
                     TWHRLAQFNGEPIPLRQLTAGDVWDEVTVFMSLLFLAHLEK"
BASE COUNT          408 a          604 c          631 g          265 t
ORIGIN      
        1 ccggcgcgcg accctggccg aggagttgag cggcctgcgg tcgaagctgg aggcgatggc
       61 gacccagacg acgttcctcg aggagcgtcg aaccgaggtc ggctcgcacc tcaccgcgct
      121 cgacggtcag cggaaggacc acgagaaacg catcgagacc ttccaggact ccctgggcca
      181 cctcgagacc gagatccgcg gtctcgagaa gacggaggcc cagatgggca agaaggtgaa
      241 ggacctccag gacgcgcggg acgcggccta caaggagaag acggaccgcg aggcggacct
      301 cgacaaggtc acgcacaaga tcgagacgaa agaggacttc ctcctgaaga tggagacgga
      361 gctgaaggtc caggaggagc agctcgccga ggccgaacgc atcatgaagg agatggcggt
      421 cgagctgcag gagggacgcc tcccgagcct cgaggaactg aagacgacga tcgcggactg
      481 cgaggcggcg atcaacgcgc tcggcccgat caacctccgg gccctcgagg actacgacgc
      541 gcagcagtcc cgtgcagtcg agctgaagga cgagttcaag cggctcgagg gacagcgcga
      601 ggagctgatc cacctggtcg acgagctcac ggacaagaag aaagaggggc tcgccaagat
      661 cttcacgtcg atcaacgaga acttcagccg cgtctacgcg gaactgacgg agggcggcga
      721 ggcggaactc gccctggaga acccggagaa gccgttcgag gccgggctca ccctcaaggt
      781 caagccggcc cacaagaagg ccctccggct cgaggccctg tccggcggcg aacgatccct
      841 cgcctcgatg gccctgatct tcgcgatcca ggagtacgac ccatcgccgt tctacctgct
      901 cgatgagatc gaccagaacc tcgacgcggt caacgcggag aaggtggccc ggatgatccg
      961 ccgaaacagc tcgacggccc agttcgtcca gatctcgctg cgcaaggtca gcctgaagga
     1021 agcggaccac ttggtcggcg tgacgatgac gcccgattcg ctgtcggagg tcatcatgcg
     1081 cgtgaacctg gcggacatcg aggacgaaaa gcccacggag gtgatcccgg catgagcgag
     1141 aattaccagg cgatcctgaa tcatctcctg ttccacaagg cgctgatcag cgagacggag
     1201 ggcggtgagc ggatcaaccg gtacctcgcg atgttgaacg agatcgatca ggggatgcac
     1261 gtggccgtcc gggacccgtt cgagaagtcc gtggtcgcgg cgttcgaact cgcgctcgag
     1321 cgacggctcg acccgtggga gatcaacctc gtgcccttca cgaagctctt cctggacaag
     1381 gtgaagaaag acggcgccgt gaatttcgtc acggcgggca agctcgtgtt cctcgcgtgg
     1441 tccatcctga agatgcagag cgacaaggtc ctcctcgacg cgatgccgcc ggagcccgag
     1501 gccgacgtcg gcggctggga ccccgacatg ttccgcgatc ccgcggacct cgattacaac
     1561 caggtcgtcc tggccggcac ggcgacgccg ctcacggagg cgatccgacg cgaaggccgc
     1621 cgggccgtca ccctgatgga actgatggac gccttcgacg aggcccgccg ggaatccgag
     1681 atccagctcc agctgaacgc gttgcgcgaa caggccatcc gaaagttcgc gcccaacttc
     1741 caccgcaagg tccacgggga agacctgacg gacgacatcg ccctcacctg gcaccggctc
     1801 gcccagttca acggagaacc gatcccgctg cgccagctga ccgcgggcga tgtctgggac
     1861 gaggtgaccg tgttcatgtc cctcttgttc ctggctcatc tggagaag
//
LOCUS       DATLMA010000041         1515 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_4205,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000041 DATLMA010000000
VERSION     DATLMA010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4205"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1515
                     /locus_tag="VNA10_00565"
     CDS             <1..>1515
                     /locus_tag="VNA10_00565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36200.1"
                     /translation="GIQIQNFIKNKYPNLALRLPSAGLQAGEWNQYVVEVENRGKLPA
                     RNVQIEFSGDLEAKGIAPIAEIGVGEVVPVRVGLRPKGKGSLPVAVGITYKRLFDENR
                     YEVRDTKEIKVEPESTYLVEDVFLIHSDGRLIAHYSRKFREEIDEDIFSGMLTVVQDF
                     VKDSFKTRTRVGMKRLDFGDSKILIERSPHTFLATVVVGQEPKLLPLYMLQVLKEVED
                     RYGNVLERWTGLLHQLEGIDEMIQKLVFVAKDPNAVVGALANSPVTLTAMAIDALGTV
                     QATEANELLAKAQSTLETDIQLAWQFIEQARSQADLVKSQLRDRMGDILTAARDTVSE
                     LKSIGADTSQAELLLREAEEAYSEGKYERVREIQQGLHESLERQKGEIASKKVEVELA
                     ALINDISIAKSQNLDVREAESYLTKIEGAIQKKNPRQMDEYLRRAKESLSRQRRRTVL
                     DRARADMERIRNMVAAANSVHADLSDVEALLQKAEEAMRLEDLKGAESLIERAEV"
BASE COUNT          330 a          475 c          498 g          212 t
ORIGIN      
        1 ggcatccaga tccagaactt catcaagaac aagtacccga acctggcact gcgcctgccg
       61 tcggccgggc tgcaggccgg ggagtggaac cagtacgtcg tcgaagtcga gaaccgcggg
      121 aaactccccg cgcggaacgt ccagatcgag ttctccggcg acctcgaggc gaagggcatc
      181 gccccgatcg ccgagatcgg cgtgggcgag gtcgtcccgg ttcgggtcgg cctgcggcca
      241 aagggcaagg gctcgctccc cgtcgcggtc gggatcacgt acaagcggct cttcgacgag
      301 aaccgctacg aggtccgcga cacgaaagag atcaaggtcg aaccggagtc gacgtacctc
      361 gtcgaggacg tcttcctcat ccattccgac ggccggctca tcgcgcacta cagccgcaag
      421 ttccgcgagg agatcgacga ggacatcttc tccggcatgc tcacggtcgt tcaagacttc
      481 gtcaaggatt cgttcaagac gcgcacgcgc gtcggcatga aacgactcga cttcggggac
      541 tcgaagatcc tgatcgaacg ctcaccgcac acgttcctcg ccaccgtggt cgtcggccag
      601 gaaccgaagc tactcccgct ctacatgctc caggtcctga aagaggtcga ggaccgatac
      661 ggcaacgtcc tcgagaggtg gaccggcctc ctgcaccagc tcgaaggcat cgacgagatg
      721 atccagaagc tcgtcttcgt cgcgaaggac ccgaacgccg tcgtaggcgc gctcgcgaat
      781 agcccggtga ccttgacggc catggcgatc gacgcgctcg gcacggtcca ggcgactgag
      841 gcaaacgaac ttctcgcgaa ggcacagtcg accctggaga cggacatcca gctcgcatgg
      901 caattcatcg aacaggcgag gtcgcaagcg gatctggtca agagccagct gcgggaccgg
      961 atgggcgata tcctgacggc ggcccgcgac acggtcagcg agctgaagtc gatcggcgcg
     1021 gacacgagcc aggcggagct cctcctcagg gaagcggagg aagcgtacag cgaaggcaag
     1081 tacgagcgcg tccgggagat tcagcaaggc ctccacgaat ccctcgaacg gcagaagggc
     1141 gagatcgcct cgaagaaggt cgaagtcgag ctcgccgcgc tgatcaacga catctcgatc
     1201 gcgaagagcc agaacctgga cgtccgggag gcggagtcgt acctcacgaa gatcgagggc
     1261 gcgatccaga agaagaatcc gcggcagatg gacgagtacc tgcggcgggc gaaagagtcc
     1321 ctctcccgcc agcgccgacg gaccgtcctg gaccgggcgc gcgccgatat ggaacggatc
     1381 cggaacatgg tggcggcggc gaactcggtc cacgcggacc tctccgacgt cgaggcgctg
     1441 ctccagaagg cggaagaagc gatgcgcttg gaggacctga aaggggccga gtccctcatc
     1501 gagcgggccg aggtg
//
LOCUS       DATLMA010000042         1303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_426112, whole genome shotgun sequence.
ACCESSION   DATLMA010000042 DATLMA010000000
VERSION     DATLMA010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426112"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1056)
                     /locus_tag="VNA10_00570"
     CDS             complement(<1..1056)
                     /locus_tag="VNA10_00570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase/methylcitrate synthase"
                     /protein_id="HVG36201.1"
                     /translation="MVSPLKADLAGPRIDKGLDDVYVKETSICFIDGQRGRLLYRGYD
                     IRDLAAHSSFEETVFLLLEGHLPNREELEKAKADLGTARTLPPSVLRLLRSMPEHAPP
                     MDVLRTAVSYMYSFDPERDDMTRAANMRKARRLVAQFGTIVATYERIRKGQRVVRPDP
                     KLGHAEDFLRMMTGRRPDSVHARMMDVAMILYADHAMNASTFAATVAASTLADLYSTI
                     VAAISTLKGPLHGGAIEASLNTIERIARPEAAEELVLNTLRNKEKVFGFGHRVYKTYD
                     PRALILKDYAGRLAEMSGDDTYYRIATIIEDTVVRSLASKQIYPNVDFYSGLVFHDLG
                     IPTDLFTPVFAIARIAGW"
BASE COUNT          237 a          389 c          447 g          230 t
ORIGIN      
        1 ccagccggca atccgggcga tggcgaagac cggggtgaac aggtctgtcg ggatcccgag
       61 gtcgtggaag acgaggccgg agtagaagtc gacgttcggg tagatctgtt tcgacgcgag
      121 cgaccgcacg accgtgtcct cgataatcgt cgcgatccgg taatacgtgt cgtctccgct
      181 catctccgcg agtcggcccg cgtaatcctt gaggatgagc gcccgcgggt cgtaggtctt
      241 gtagacgcga tgcccgaacc cgaagacctt ctccttgttc cgcaacgtgt tgaggacgag
      301 ctcctccgcg gcctccggac gagcgatccg ctcgatcgtg ttcaaggagg cctcgatcgc
      361 gccgccatgg agcgggcctt tgagcgtcga gatcgcggcg acgattgtgc tgtacaggtc
      421 cgcgagcgtc gacgccgcga ccgtcgcggc aaaggtcgac gcgttcatcg cgtggtcggc
      481 gtagaggatc atcgccacat ccatcatccg cgcgtggacc gaatcgggcc gacggccggt
      541 catcatccga aggaagtcct ccgcgtgacc gagttttgga tcgggacgga cgacgcgttg
      601 ccccttgcgg atccgctcgt acgtggccac gatcgtcccg aactgggcga cgagtcggcg
      661 ggctttgcgc atgttcgccg cgcgcgtcat gtcgtcgcgt tcgggatcga agctgtacat
      721 gtacgacaca gccgtccgga ggacgtccat cggcggggcg tgctcgggca tcgaacggag
      781 cagccgcagg acagacgggg gaagcgtgcg ggccgtcccc aggtcggcct tggccttctc
      841 gagctcctcc cggttcggga gatgaccctc caggaggagg aagacggtct cctcgaacga
      901 cgagtgggcc gcgagatcgc ggatgtcgta cccccggtag agcagacgcc cccgttggcc
      961 atcgatgaaa cagattgacg tctccttcac gtagacgtcg tcaaggccct tgtcgatccg
     1021 cgggcccgcg aggtccgcct tcagggggga gaccattttc gtcgcctcag gaacggcttc
     1081 ccgggaggat gggggaacct aaggtcggtg caatattaaa ggtgaacgtt gtccgtcgat
     1141 ggaagaacgt cagaggggaa tccggaggat tgcatccgcc atcatcccga tgaggagaag
     1201 ggcaaggtag atccccgaga acttgtaacc ggcccaggcg gtctctgcgc tgggatgcgc
     1261 gatgaacttc gcggtgagtg cgagcagcgc gacgcccaag acg
//
LOCUS       DATLMA010000043         1672 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_486329, whole genome shotgun sequence.
ACCESSION   DATLMA010000043 DATLMA010000000
VERSION     DATLMA010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486329"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VNA10_00575"
     CDS             complement(<1..591)
                     /locus_tag="VNA10_00575"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF041679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042500 - aspartic endopeptidase activity,
                     intramembrane cleaving [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presenilin family intramembrane aspartyl
                     protease PSH"
                     /protein_id="HVG36202.1"
                     /translation="MRREYAPVAAMAVLLVASQAVAIALSPLFQSSGFQAFPNPGDVT
                     NTAIYIILILVFTAVILGLVRYRRQNLVKYVIMASIFVTLAFVLLLPLYYGLYYGTGQ
                     NQDPNFQNLLADVATLLSFAVAAVLVYLLVKFPEWYVVDTIGFVTAAGVTAILGISFG
                     LLPAILLLIALAVYDAWAVYRTKHMITLADELTSQRL"
     gene            complement(598..1218)
                     /locus_tag="VNA10_00580"
     CDS             complement(598..1218)
                     /locus_tag="VNA10_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011306379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit beta"
                     /protein_id="HVG36203.1"
                     /translation="MSSFGYEELLARAKKALPAALSSGERFQVPSPDVVIEGKTTILR
                     NFEDIVGAIRRDPDMVLTYLLRELGTSGAMEGRRVVFKSKVTSQQIEERVKSYVDAYV
                     LCQECGRPDTRLVKEGRIAMLECDACGARRPVKAVKKAAKVEEAPLVEGKVYELMIQD
                     IGKKGDGIAKLDKYVIYVPGTAKGAIVKVHIEKIAGTVAFGRVTRE"
     gene            complement(1260..>1672)
                     /locus_tag="VNA10_00585"
     CDS             complement(1260..>1672)
                     /locus_tag="VNA10_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018577.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HVG36204.1"
                     /translation="VLGLKEANSSEFDPKTPHPVVDLLPEQRGVKGMGATMRLGAHEI
                     DVDPNSTTAKLYDATTIHERHRHRYEINPAYIPKLEDAGLRYVGRSDDGRRMEVLELK
                     GHPYFVASQFHPELRSRPLRPSPIHLGLVRAAAR"
BASE COUNT          309 a          528 c          527 g          308 t
ORIGIN      
        1 gagccgttgg ctcgtcagct catcggcgag tgtgatcatg tgcttcgtcc ggtacactgc
       61 ccacgcgtcg tagacggcga gagcgatgag caggaggatc gcgggcaaca gtccgaacga
      121 gattcccagg atcgccgtca cgcccgcggc ggtcacgaag ccgatcgtgt cgaccacgta
      181 ccactccggg aacttcacga ggaggtagac caagacggcg gcgacggcga acgaaagcag
      241 ggtcgcgaca tccgcgagca agttctggaa attcgggtct tggttctgcc cggtcccata
      301 gtacaatcca tagtacagcg gcagcaacag cacgaaggcc agcgtgacga agatcgatgc
      361 catgatgacg tacttcacaa ggttctgacg acggtaacgg acgagcccca ggatcaccgc
      421 ggtgaagacg aggatcagaa tgatgtagat cgcggtgttc gtgacgtcac ccgggttcgg
      481 gaaggcctgg aaaccgctgc tctggaacaa cggagacagc gcaatcgcga ccgcttggct
      541 cgcgaccaag agcaccgcca tcgccgcgac gggagcgtac tcgcggcgca tcgatgccta
      601 ctcccgcgtc acgcgtccga aggccaccgt gccggcgatt ttctcgatgt gcaccttgac
      661 gatcgcgccc ttcgcggtcc caggcacgta gattacgtac ttgtcgagct tcgcgatccc
      721 gtcgcccttc tttccgatgt cctggatcat caactcgtag actttgccct cgacgagcgg
      781 ggcttcctcg accttcgcgg ccttcttcac ggccttcacg ggccgccgcg cgccgcacgc
      841 gtcgcactcg agcatcgcga tccggccttc cttgacgagc cgggtgtcgg gtcggccgca
      901 ttcctggcag agcacgtacg cgtcgacgta ggacttgacc cgctcctcga tttgctgcga
      961 cgtaaccttg ctcttgaaca cgacgcggcg cccttccatc gcgcccgagg tgccgagttc
     1021 ccgcaagaga tacgtcagga ccatgtccgg atcccgccgg atcgcaccga cgatgtcctc
     1081 gaagttccgg aggatcgtcg tcttgccctc gatcaccacg tccggtgacg ggacttggaa
     1141 tcgctccccg ctgcttagcg ccgcgggcaa cgccttcttg gcgcgtgcaa ggagctcttc
     1201 atatccgaaa gaagacacga agggcgacca aagcccgcgt cggtttaaag gtttgcgagc
     1261 tagcgtgcgg ccgcgcgaac gaggccgaga tggatcgggg aaggcctcaa cggacgggaa
     1321 cgcaactcgg ggtggaactg cgatgcgacg aagtacgggt ggcctttcaa ctcgaggacc
     1381 tccatcctac gtccgtcgtc ggatcgaccg acgtatcgga ggcccgcgtc ctcgagcttc
     1441 gggatgtacg ccgggttgat ctcgtatcgg tgccggtggc gctcatggat cgtggtggcg
     1501 tcgtacagct tcgcggtcgt cgagttcgga tcgacatcga tctcgtgggc accgaggcgc
     1561 atcgtcgcgc ccatgccttt cacgccgcgc tgctccggca gcaagtcgac gacggggtgg
     1621 ggcgtcttcg gatcgaattc ggagctgttc gcctccttca ggccgaggac gt
//
LOCUS       DATLMA010000044         1101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_305789, whole genome shotgun sequence.
ACCESSION   DATLMA010000044 DATLMA010000000
VERSION     DATLMA010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305789"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..422)
                     /locus_tag="VNA10_00590"
     CDS             complement(15..422)
                     /locus_tag="VNA10_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36205.1"
                     /translation="MPEEEFLGELSEKTTSVTIKEFTPDGVLISYNLQGTVKGQYDAA
                     HMETVDALFKPDGTYEFESRGIDQTEDGDMLIIKGKGTGRQISPTSVHAEGEAVFQTL
                     SEKLKRLNSAQGRFEGTYNVTTGEFIAKVFTLK"
     gene            complement(544..>1101)
                     /locus_tag="VNA10_00595"
     CDS             complement(544..>1101)
                     /locus_tag="VNA10_00595"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HVG36206.1"
                     /translation="VLDMATSTVPRGKVEVYNRLGQPMPHGWAVDETGRSSTDPARVL
                     NALAKRLGGGLLPLGGEGEDLGGHKGYGLALMVDVLCGVLSGAATGLQVYADEKKPDV
                     GHFFMALDPTAFRPLDEFRRDMDRLARELKDSPKAHGQDRIYVHGEKSFARMEKFRKE
                     GIPLDPKVVDGLKKIGTDLGIAWAA"
BASE COUNT          179 a          363 c          321 g          238 t
ORIGIN      
        1 agcggtttct cggactactt gagggtgaag accttcgcga tgaactcgcc cgtcgtcacg
       61 ttgtaggtcc cttcaaaccg gccttgggcg ctgttcagcc gcttcagctt ttccgacagc
      121 gtctggaaca cggcttcgcc ttcggcgtgg acggacgtcg ggctgatttg tctcccggtg
      181 cccttcccct tgatgatcag catgtcgccg tcttcggtct gatcgattcc gcgggactcg
      241 aactcgtagg tcccgtcggg tttgaagagc gcgtccacgg tctccatgtg ggccgcgtcg
      301 tattggccct tcacggttcc ctgcagatta taggagatca gaaccccgtc gggcgtgaac
      361 tccttaatcg tcacggacgt cgttttttcg ctcagctcgc ctaggaattc ctcttcgggc
      421 atggtttcga aaacctcctc caactcgtgc gcctcatggt gtgcgacagg taatacgcct
      481 ttcggcaggg agaatccgaa gactcggagg tctccaatcg ccatcggaaa atccgtagac
      541 gcatcacgcg gcccacgcga tgccgaggtc ggttccgatt ttcttgaggc cgtcgacgac
      601 tttcggatcc agcgggattc cctctttgcg gaacttctcc atccgcgcga agctcttctc
      661 tccgtgcaca tagatccgat cctggccgtg cgccttcgga ctgtccttca gctcgcgcgc
      721 aagccggtcc atgtcccgcc ggaactcatc gagcggccgg aacgcggtcg gatcgagcgc
      781 catgaagaag tgcccgacgt ccggcttctt ctcgtccgcg tacacttgca accccgttgc
      841 ggcgccactc aggacgccgc agaggacgtc gaccatgagg gcgaggccgt atcccttgtg
      901 accgccgagg tcctcgcctt cgccgccgag aggcaagagg ccgccgccga gtcgcttcgc
      961 aagggcattc agaacgcgcg ccggatccgt cgaactccgg ccggtctcgt cgacggccca
     1021 tccgtgcggc atcggctgac cgagtcgatt gtacacctcg accttgccgc gagggaccgt
     1081 ggacgtcgcc atgtccagga c
//
LOCUS       DATLMA010000045         3937 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_548607, whole genome shotgun sequence.
ACCESSION   DATLMA010000045 DATLMA010000000
VERSION     DATLMA010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548607"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1584)
                     /locus_tag="VNA10_00600"
     CDS             complement(43..1584)
                     /locus_tag="VNA10_00600"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HVG36207.1"
                     /translation="MDRDSQVFGDLESRASAAASTLFSLGGDPLPSQKFSRKYLTRHK
                     KSGQLWRRAVRITPGGVESNVRYFKPHPFLADYGDGGYIYDVDGNKILDLMMGFGALL
                     LGHNNRDIALEVIKQLESGSMLGVTSELYIDYIQAVRKAVPSMKKVRLCNSGTEATMH
                     AIRTARAYTGRDKIAKAEGAYHGAHDYVLQSLDMDSRTASRMNGYRAIPYGRGIPKAV
                     SDLVVIFPYNDIEATAAILEENEDEVGALIIEPVLCGPGVIAPKANYLKRLRQLTRKK
                     GIVLIFDEVLTGFRLAYGGAQEYYDIRPDMTTFGKIAGGGFQLAGFGGEAQIMNVLEP
                     GRGWKYATFHAGTYNGHPISVAAGLKGLEILGEHPEYYDHINGLGRQLYSGLQDLADD
                     RRIPAWVEYVGSIGNVYFTTKDEIRNFRDTLSANTRRWWNWFIHCLGNNVLFGIPNTG
                     ERAFICTEHTEEDVEWALEVADNAFAAIGKEARRHKEKAPTVQLQAVGEQAAVYGDAP
                     TPPSV"
     gene            complement(1956..2040)
                     /locus_tag="VNA10_00605"
     tRNA            complement(1956..2040)
                     /locus_tag="VNA10_00605"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2002..2004),aa:Leu,seq:cag)
     gene            2138..2629
                     /locus_tag="VNA10_00610"
     CDS             2138..2629
                     /locus_tag="VNA10_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HVG36208.1"
                     /translation="MFEKRETRFFPGVRRDDAWAKAWDWWGRQGFHLAKTGPYRFHGS
                     SHYARIGLRREFDLIIDDVSGESNLDLTFSAQITDEGLIAGAVTAVFLLPVAVLGGVV
                     SYSEYETDAQNLIVAFWQFFSARPGALTDKPTSAMPARCKGCGAALLPDWKVCPYCGR
                     ARD"
     gene            complement(2657..2881)
                     /locus_tag="VNA10_00615"
     CDS             complement(2657..2881)
                     /locus_tag="VNA10_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015492941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36209.1"
                     /translation="MVMEPVSVEEAIEKAKKKGLRPGRVKGTDGIQFTKGRNNRIDVI
                     TWDEFRSTLADRELEVFDSNGFMKIMKRHR"
     gene            3009..>3937
                     /locus_tag="VNA10_00620"
     CDS             3009..>3937
                     /locus_tag="VNA10_00620"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HVG36210.1"
                     /translation="MPRFGSSGIRGLGNVDVTPDLALHVGMILGESYGGTIVGRDPRV
                     TGPMLVQALTAGLLSSGASAVDAGLVSTPTLARGARDFACGAVVTASHNPAPYNGIKL
                     WNPDGMAFDEDQQREIEAALDRGHLPMPSWDHVGSISYRPDLVEQHVESILKDVGMAK
                     LRVVVDCACGATATITPFLLRQMGCDVIAINAQADGHFPGRDPEPIEENLAVLSSTVR
                     AVHADLGIAHDGDGDRMVAVDREGRFVGGDALLALFAREEVRRGLVVPVDASMVLDDL
                     LPKAKIWRTRVGDVYVAAELKRRGADFGGEPSGT"
BASE COUNT          664 a         1218 c         1248 g          807 t
ORIGIN      
        1 ggccctgaac tgacccagtc gactgtgggt gctggaggcg ttctacacgc tcggcggcgt
       61 cggggcatcg ccgtagacgg ctgcttgctc tccgacggct tggagttgga ctgtcggcgc
      121 cttctctttg tgccgccgcg cctctttccc gatcgccgcg aacgcgttgt cggcgacctc
      181 gagcgcccat tcgacgtcct cctccgtgtg ttccgtgcag atgaacgccc gctcgcccgt
      241 gttcgggatg ccgaacagga cgttgttgcc gaggcaatgg atgaaccagt tccaccatcg
      301 acgcgtgttc gcgctcagtg tgtcccggaa gttgcggatt tcgtccttcg tcgtgaagta
      361 gacgttcccg atggacccga cgtactcgac ccacgccggg atgcgacggt cgtccgcgag
      421 gtcctggagc ccactgtaga gttgtcgacc gagtccgttg atgtgatcgt aatattccgg
      481 atgttctccg aggatctcga gccccttgag gcccgcggcg acgctgatcg gatggccgtt
      541 gtacgtcccc gcgtggaacg tcgcgtactt ccagcctcgg cccggctcga ggacgttcat
      601 gatctgggct tcgcccccga agcccgcgag ctggaatccg ccgcccgcga tcttgccgaa
      661 cgtcgtcatg tccggacgga tgtcgtagta ttcctgtgcg cctccgtagg caaggcggaa
      721 gccggtgagg acctcatcga aaatcaggac gatgcccttc ttccgcgtga gctgtcgcag
      781 gcgcttgagg tagttggcct tcggcgcgat aaccccggga ccgcagagca cgggctcgat
      841 gatcaaggcg ccgacctcgt cctcgttctc ttcgaggatc gccgcggtgg cctcgatgtc
      901 attgtacggg aagatcacga ccaggtcgga gacggccttc gggatccccc ggccgtatgg
      961 gatggcgcga tagccgttca tgcggctcgc ggtgcggctg tccatgtcga ggctctgcaa
     1021 cacgtagtcg tgggctccgt ggtacgcccc ttcggctttc gcaatcttgt cgcggcccgt
     1081 gtacgcccgc gccgtgcgaa tcgcgtgcat cgtcgcctcg gttccgctgt tgcacagccg
     1141 caccttcttc atcgacggca cggccttccg caccgcttgg atgtagtcga tgtagagctc
     1201 gctcgtcacc ccgagcatcg atccggactc gagttgtttg atcacctcga gggcgatatc
     1261 ccggttgttg tggccgagga gcagggcgcc gaagcccatc atgagatcga ggatcttgtt
     1321 tccgtcgacg tcgtagatgt acccgccgtc gccgtagtcg gcgaggaacg gatgcggctt
     1381 gaagtaccgg acgttgctct cgaccccgcc gggcgtgatc cggacggcgc ggcgccagag
     1441 ctgcccgctc ttcttgtgtc gcgtcagata cttccggctg aacttctggg acggcaacgg
     1501 atcacctcca agtgaaaaca aggtcgacgc ggccgccgac gcacgggatt cgaggtcgcc
     1561 gaagacctga gaatcccggt ccacttgggc attcctaaaa ggcgtctgga aatatgaata
     1621 gctttcgcgc atagtttgtg ctttgtatat caaaggtgaa agaatagaaa agtatagtcg
     1681 gtagctatac ggccgttaga ccctcgtcgg gccctggccc atggtcgagg taggggtagt
     1741 tcataaggcg gccgtacaaa gcggtccgtc ggaagccatt atgtgccttc ggtcggaccc
     1801 gctcagttcc ggtcgaatgt cgatttctgt ccttcaggga tgaggcgatt cgacgactgg
     1861 tttcgttcac ggaatcaagg ggcaacccaa cggaggtcac ggaccagcga tcagcgtggc
     1921 catctcagac ctgccgccgt aaacgcttga cttgatgcgt ggggcaggat ttgaacctgc
     1981 gaacccctac gggacaggat tctgagccct gcgcctttga ccaagctggg ccacccacgc
     2041 acgacgcagc cggaggcggc atgggctcgt aataatcttg cggtggacat cgggaggagc
     2101 gcaggtctaa ccggtccccg accatcctga ggaggacatg ttcgaaaaac gcgagacgcg
     2161 attcttcccc ggggtgcgcc gtgatgacgc gtgggcgaag gcctgggact ggtgggggcg
     2221 tcagggattc cacctcgcga agaccgggcc ataccggttc cacggatcct cgcattacgc
     2281 gcgaatcgga ttgcgtcgcg agttcgactt gatcatagac gatgtctcgg gcgaatcgaa
     2341 cctcgatctg acattcagcg cgcagatcac cgacgaaggg ctcattgccg gtgctgtcac
     2401 cgcggtgttt ctccttcccg ttgccgtgct cggcggtgtg gtgtcctatt cggaatacga
     2461 gacggacgcg cagaatctca tcgtcgcctt ctggcaattc ttctccgcgc ggcccggagc
     2521 cctgacggac aaaccgactt ccgcgatgcc ggcgcgatgc aagggctgtg gtgcggcgct
     2581 tctcccggac tggaaagtgt gcccctactg cggacgggcc cgagactaac cgaacgcgag
     2641 tggcgagatt gccggctcac cggtgccgtt tcatgatttt catgaagcca tttgagtcga
     2701 agacttcgag ttcgcgatcc gcgagcgtag accggaattc atcccatgtg atgacgtcga
     2761 tccgattatt ccgacctttc gtgaattgaa taccgtcggt ccctttgact cggccgggcc
     2821 tcaatccctt cttctttgcc ttctcgatgg cctcctcgac actcacgggt tccatgacca
     2881 tccgatccct ccgcgacgag gtccaactcg cgcgcgtttg catccgggcg tcgctatata
     2941 atggttgttt cagggaggca ttcggtcgcg ccagaagact ttctaatgca cccgtcgtat
     3001 gccgatgggt gccgcggttc ggttcatccg ggatccgggg actggggaac gtcgacgtga
     3061 cccccgacct cgccctccat gtcgggatga tcctcggaga atcctacgga ggcacgatcg
     3121 tcggccgcga tccgcgcgtg accgggccga tgctcgtcca ggcgctcacc gcgggactcc
     3181 tttcttcggg cgcgtccgcg gtcgacgcgg gcctcgtctc gacgccgacc ttggcccgag
     3241 gagcccgtga cttcgcatgc ggcgcggtcg tcacagcgtc ccacaacccc gccccataca
     3301 acggaatcaa gctctggaat ccggacggga tggccttcga tgaggaccag caacgcgaga
     3361 tcgaggcggc gctcgatcga ggccatctcc cgatgccctc ctgggaccac gtcggttcga
     3421 tctcgtatcg tcccgatctg gtcgagcagc atgtggagtc gatcctgaag gacgtaggga
     3481 tggcgaagct tcgcgtcgtc gttgactgcg cgtgcggtgc gacggcgacg atcacgccgt
     3541 tcctcctgcg gcagatggga tgcgacgtga tcgccatcaa cgcgcaggcg gacggacact
     3601 tcccgggtcg tgatcccgag ccgatcgaag agaatctcgc ggtactctcg tcgaccgttc
     3661 gtgcggtcca cgcggacctc ggcatcgccc acgacggcga cggggatcgc atggtggcgg
     3721 tcgaccgcga gggtcgattc gtcggcgggg acgcactcct ggcgctcttc gcccgcgagg
     3781 aagtccgacg cggtctcgtc gtgcccgtgg atgcgtcgat ggtactcgac gatcttctcc
     3841 cgaaagcgaa gatctggcgc acgagggttg gcgacgtcta tgtcgccgcg gagctcaagc
     3901 gtcgcggggc ggatttcgga ggcgaaccct ccgggac
//
LOCUS       DATLMA010000046         1293 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_185088, whole genome shotgun sequence.
ACCESSION   DATLMA010000046 DATLMA010000000
VERSION     DATLMA010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185088"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="VNA10_00625"
     CDS             complement(<1..568)
                     /locus_tag="VNA10_00625"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015491683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HVG36211.1"
                     /translation="MKRSTIRVAVVYIEGTNCEDESVAYFRHLGARAEKVHLKQLTGD
                     APAELRRDLDDYDILMIPGGFAAGDYVRAGTIFAARMRSKLSKDLVGFVKAGKPVFGV
                     CNGFQVLVEAGLLPALGGVMTDEPEAVLATNDSSHYECRPSLLRMENGGSCAFTRTLK
                     KGQVVTFISAHAEGKLLFPADREKRILKE"
     gene            complement(565..>1293)
                     /locus_tag="VNA10_00630"
     CDS             complement(565..>1293)
                     /locus_tag="VNA10_00630"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HVG36212.1"
                     /translation="CLNFGNPEKPDRLWSFREAARGIGSTAKALGIPIPSGNVSFYNE
                     SSRGPCPPTPALLGVGIVEDLRHCVTSDFKRAGDPVVLVGSTQAELGGSEYLRLRGGT
                     GPVPSVDPMGLRASMDHLLRAIRAGTVAAAHDLSHGGLAVAAAEMCLGGDLGADLKTT
                     AMDPMRWDVQLFSESNGRWLVEVTKDRYEAFTHLMEGIPTTYLGTTGGRSLHLARGRQ
                     WTSLAVPVMRKAWTEAIPNQVVVS"
BASE COUNT          225 a          446 c          404 g          218 t
ORIGIN      
        1 tctccttcag gatccgtttc tcccggtcgg cgggaaagag gagcttgccc tcggcgtgag
       61 ccgagatgaa agtgacgacc tggcctttct tcaaggtccg ggtgaacgcg cacgaaccgc
      121 cgttctccat ccggaggagg ctgggtcggc actcatagtg gctcgagtcg ttggtcgcga
      181 ggaccgcctc gggctcgtcc gtcatcacgc cgcccagggc cggcagaagc cccgcctcga
      241 cgaggacttg gaagccattg cacacgccga acacgggctt gcccgccttc acgaatccga
      301 cgagatcctt cgagagcttc gatcgcatgc gcgccgcgaa gatcgtcccc gcccggacgt
      361 aatcgcccgc cgcgaacccg cccggaatca tcagaatgtc gtaatcgtcg agatcgcgac
      421 gcaactccgc gggcgcgtcg cccgtcagct gcttcaggtg gaccttctcg gctcgggcgc
      481 ccagatgacg gaaataggct acggactcgt cctcgcagtt cgtgccttcg atgtagacga
      541 cggccacacg gatggtcgag cgtttcacga gaccaccacc tggttcggga tcgcttcggt
      601 ccacgctttc cgcatcacgg ggaccgcgag ggacgtccac tgccggcccc gcgcgagatg
      661 caacgaacga ccgccggttg tgcccagata cgtcgttgga atcccctcca tcagatgggt
      721 gaaggcctcg tatcggtctt tcgtgacctc gaccagccaa cgcccgttcg actcggagaa
      781 gagctgcaca tcccatcgca tcggatccat cgcggtcgtc ttgagatccg cgccgaggtc
      841 ccctcccagg cacatctccg cggccgcgac cgcaaggcca ccgtggctga gatcgtgcgc
      901 cgccgccacg gtccccgcgc ggatggcccg gagcaggtgg tccatcgatg cccgaaggcc
      961 cattggatcc accgagggca ccgggcccgt gccgccgcga aggcgtaggt actcggaacc
     1021 tccgagctcg gcctgtgttg agccgaccag gaccaccggg tcccctgcgc gcttgaaatc
     1081 ggacgtcacg caatgccgca ggtcctcgac gattccgacg ccgaggaggg ctggcgtcgg
     1141 cgggcacggt ccacgactcg attcgttgta gaacgacacg ttcccggatg gaatcgggat
     1201 cccgagggct ttcgcggtgc tcccaatgcc gcgcgccgct tcgcggaaag accacagacg
     1261 gtccggcttc tccggattcc cgaagttgag gca
//
LOCUS       DATLMA010000047         1534 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_667524, whole genome shotgun sequence.
ACCESSION   DATLMA010000047 DATLMA010000000
VERSION     DATLMA010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_667524"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /gene="corA"
                     /locus_tag="VNA10_00635"
     CDS             <1..978
                     /gene="corA"
                     /locus_tag="VNA10_00635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HVG36213.1"
                     /translation="VRGAMVRVEVIAYTPTEFLEETDVAIGRCRELAETHKVTWVNVV
                     DPDGRTVEELETLFGLHPLALEDAQNQDLPPRVDVYEGVVFVVARTIVWAEGLDTDQI
                     SLFIAKNFIVTIHDKVFPQLEDTRIRLRKKDPRLLKSGTDFLAYSILDDLVDSYFPHL
                     DRLQNIVDELEEKALAEPVRETANTIHQFRRDLLILRNDLRPQRDAFAELARGELTGF
                     RKETREYFRDVYDHMIQTLDRLDTLREVSAGLMEVYLTVVSNSLNEVMKTLTVIATII
                     LPLGLIASAYGMNVAFPGKEDLSGFIVSLVLMGIVVVVMVMFFRRRKWL"
     gene            1043..>1534
                     /locus_tag="VNA10_00640"
     CDS             1043..>1534
                     /locus_tag="VNA10_00640"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG36214.1"
                     /translation="MPSDDSERESTRRAWNESAESYRRAMRLFEPYGFDLLARVNPKI
                     RESALDLATGLGEPAMSIARMVGPDGRVVGIDLSERMVDLATRIAKERRIPGLTFLAM
                     DAEKLDFPDESFDLVTSRFGFHIFAHPEAVAKEAHRVLRPKGRIGIVVWSTAEKATAI
                     NAVV"
BASE COUNT          290 a          490 c          478 g          276 t
ORIGIN      
        1 gttcgcggcg cgatggtccg cgtcgaggtc atcgcctaca cgccgaccga gtttctcgag
       61 gaaacggacg tcgccatcgg ccgttgtcgc gaactcgcgg agacccacaa ggtgacgtgg
      121 gtcaacgtcg tcgatccgga cggccgaacg gtcgaggagc tcgagacgct gttcggtctg
      181 catccgctgg ccctcgagga cgctcagaac caggacctcc cgccaagggt ggacgtctac
      241 gagggcgtcg tgttcgtcgt cgcacgaacg atcgtgtggg ccgaagggct ggacaccgac
      301 cagatctccc tgttcatcgc gaagaacttc atcgtcacga tccacgacaa ggtgttccct
      361 cagctcgagg atactcgaat ccgcttgcgg aaaaaggacc cccgactcct gaagtccggg
      421 acggactttc tcgcctactc gatcctggac gacctggtcg actcgtactt cccccatctc
      481 gaccggctgc agaacatcgt cgacgagctg gaggaaaagg ccctggccga accggtccgg
      541 gagaccgcga atacgatcca ccagtttcga cgggacctgc tcatcctccg gaacgacctc
      601 cggccccagc gggacgcgtt cgcggaactc gctcgcggcg aactcaccgg atttcgcaaa
      661 gagacccggg aatacttccg cgacgtgtac gaccacatga tccagacgct cgaccgcctc
      721 gacacgctcc gcgaggtcag cgccggtctc atggaggtct acctcaccgt cgtgagcaac
      781 agcctgaacg aagtcatgaa gacgctcacc gtcatcgcga cgatcatcct gccactggga
      841 ctcatcgcaa gcgcgtacgg aatgaacgtc gcgttccccg gtaaggagga cttgagcgga
      901 ttcatcgtgt ctctggtcct gatggggatc gtggtcgtcg tcatggtgat gttcttccgc
      961 cgccggaagt ggctctgaat cgatcgacgc gagacgctta tagcgaatgc gtgatgcctg
     1021 ggggattcct gtgcattccg ccatgccttc ggacgattcc gaacgcgagt cgacacggcg
     1081 cgcgtggaat gagagcgcgg aatcgtaccg ccgagcgatg cggctcttcg agccgtacgg
     1141 attcgacctg ctcgcccgcg tgaatccgaa gatccgggaa tcggccctcg atctcgcgac
     1201 aggtctaggc gagcccgcga tgagcatcgc ccggatggtg ggtccggatg gccgcgtggt
     1261 gggcatcgat ctctccgagc ggatggtgga cctcgccacc cgcatcgcga aggagcggcg
     1321 gatccccggc ctcacttttc tcgcgatgga cgcggagaag ctggacttcc cggacgagtc
     1381 gttcgatctc gtgacgagcc ggttcggttt ccatatcttc gcccatcctg aagcggtcgc
     1441 gaaggaagcg catcgagtcc tccggccgaa gggccggatc ggcatcgtcg tctggagcac
     1501 ggccgagaag gcgaccgcca tcaacgccgt cgtc
//
LOCUS       DATLMA010000048         1548 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_65077, whole genome shotgun sequence.
ACCESSION   DATLMA010000048 DATLMA010000000
VERSION     DATLMA010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65077"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..127
                     /locus_tag="VNA10_00645"
     CDS             17..127
                     /locus_tag="VNA10_00645"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36215.1"
                     /translation="MVSGFFDNWYVYWIGPLIGSVFAALLYAYVFLEKPR"
     gene            221..1015
                     /locus_tag="VNA10_00650"
     CDS             221..1015
                     /locus_tag="VNA10_00650"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HVG36216.1"
                     /translation="MIRGTAPAKAVAVPKPAVQESPVKFRSGKHTVIVKEVFDIAPKF
                     PQTYLIRFTFENEPVFDFEPGQFISIFAEKDGKRISRPYSIASWPENKDYLELCIKVV
                     EGGFMSNYLYHVPPGTKLQSIGPLGRFVIPEPIRYDTVFVATGTGVAPFVAMLGHIWA
                     NGLDAGHEFHVVFGVRYVHDLIYRSLIEKWEREHPNFHFYPTISRPETPDWKGRVGYV
                     QKVIENDINDYGNKQVFICGLHDMVEDVKNLCQRLGFAYVRFEKWD"
     gene            complement(1026..1328)
                     /gene="sodX"
                     /locus_tag="VNA10_00655"
     CDS             complement(1026..1328)
                     /gene="sodX"
                     /locus_tag="VNA10_00655"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0016485 - protein processing [Evidence
                     IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-type superoxide dismutase maturation
                     protease"
                     /protein_id="HVG36217.1"
                     /translation="MFPLRRFRVEDDSMRPALEPGDYVLVNRWAYKFRPPAKGDLVVV
                     RDPETPQRFLVKRVSSVPDAMQIHVAGDNADRSRDSRVFGPIATREIVGKVWIRLR"
     gene            complement(1340..>1548)
                     /locus_tag="VNA10_00660"
     CDS             complement(1340..>1548)
                     /locus_tag="VNA10_00660"
                     /inference="COORDINATES: protein motif:HMM:NF020621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="superoxide dismutase [Ni]"
                     /protein_id="HVG36218.1"
                     /translation="FPELHDLVWKALKSGSKARQEISLQSAEDLLKATNDIASIFWKT
                     KGFETITAKAPYPTERLTVYPKFK"
BASE COUNT          289 a          466 c          469 g          324 t
ORIGIN      
        1 gtggttcggt cccgccgtgg tctccgggtt cttcgacaac tggtacgtct attggatcgg
       61 gcctctcatc ggctccgtgt tcgcggcctt gctctatgcg tacgtgttcc ttgagaagcc
      121 ccgataaatc tgtcacgccc gcggcgcgcg gggagtgact cgcgcgattt cgcattctcg
      181 gacaaacgtt taaatcggat tgccgggtgc ccaacttgcc atgattcgcg ggacggctcc
      241 ggcgaaggcg gtggcggtgc caaaacccgc cgttcaagag tcccccgtga agttccgatc
      301 cggcaagcac accgtgatcg tgaaggaagt tttcgacatc gccccgaagt ttccgcagac
      361 gtacctcatt cgtttcacct tcgaaaatga gcccgtgttc gacttcgaac cgggccagtt
      421 catctcgatt ttcgcggaga aagatggcaa gcgcatctcc cgcccgtatt cgatcgcatc
      481 gtggccggag aacaaggact acctggaact ctgcatcaag gtcgtggagg gcgggttcat
      541 gtcgaactac ctctaccacg tcccccctgg cacgaagctc cagtcgatcg gcccgttggg
      601 tcgcttcgtg atcccggagc cgatccggta cgacaccgtg ttcgtggcga cggggacagg
      661 cgtcgccccg ttcgtcgcga tgctgggcca catctgggcg aacggcctcg acgcgggcca
      721 cgaattccat gtcgtgttcg gcgtgcgata cgtgcacgac ctgatctatc gcagcctcat
      781 cgagaaatgg gaacgggagc atccgaattt ccacttctac ccgacgatct cgcgtcctga
      841 gacgccggac tggaaaggcc gcgtgggcta tgtccagaaa gtcatcgaga acgatatcaa
      901 cgactacgga aacaagcagg tcttcatctg cggcctgcac gacatggtcg aggacgtgaa
      961 gaacctctgc cagcgcctcg gtttcgcgta cgtgcgattc gagaagtggg attgacctcg
     1021 gttcgctatc gcagccggat ccagaccttc ccgacgatct ctcgtgttgc gatgggtccg
     1081 aagacgcgac tgtctcggct acggtctgcg ttgtcgcccg ccacatggat ttgcatcgca
     1141 tcggggacgg aggaaactcg tttgaccaga aatcgctgcg gtgtctccgg gtcccgcacg
     1201 acgacgaggt cgccctttgc gggaggacgg aacttgtacg cccaacggtt cacgaggacg
     1261 taatcgcccg gttccaaggc aggccgcatg ctgtcgtctt cgacccggaa gcggcggagc
     1321 gggaacatcg cggacggaat cacttgaact tcgggtagac ggtcaggcgc tccgtcgggt
     1381 acggcgcctt cgcggtgatt gtctcgaatc ccttcgtctt ccagaagatg gaggcgatgt
     1441 cgttcgtcgc cttgagcagg tcctcggccg attggaggct aatctcctga cgcgccttcg
     1501 aaccggactt gagcgccttc cacacaagat cgtggagttc cgggaacg
//
LOCUS       DATLMA010000049         2987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_667876, whole genome shotgun sequence.
ACCESSION   DATLMA010000049 DATLMA010000000
VERSION     DATLMA010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_667876"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="VNA10_00665"
     CDS             <1..652
                     /locus_tag="VNA10_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36219.1"
                     /translation="GGPFTVSFDYLIRGVSTHVQEQSNGSIELDVANRYYVPQKIAYE
                     NGAVIRYQSDGQVIRAQPTFSVVKTNNTLDISFGLVSLYGAGSVSGTSTEVVNTQVFA
                     FDRQDYQGFPANAVIWVNHTSRYGLSWYRFLNQTLASALVLGGTFTQTPLDISYTAKI
                     GVIVIYKVSASYNPAAQTYTMRLEIHNSALLALSFFRLQHAQVQVGVGDTSSNVQF"
     gene            664..2316
                     /locus_tag="VNA10_00670"
     CDS             664..2316
                     /locus_tag="VNA10_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system ATPase subunit"
                     /protein_id="HVG36220.1"
                     /translation="MPKQKKILMPRGAIQQKAEWSGTRGSYLTHIPNLARDTLEEIEV
                     NPIREPFTYSRVMYDHDRSEYVYEVWEPQLNSEEKEFLDMIKDSLNRTLEYEWDKMAE
                     KDKKEYLQEAVDSFIQSRGLRLAPASKDKIVYYIIRDFVGYGPVDVLMNDLRIEDVSC
                     DGTGIPLFIFHQKFESLKTNVVFDDEDALNSFAVMLGQRCGKQISVANPILDGTSVEG
                     HRVQATYSKEVTTRGSSFTIRRYKDKPFTPVELVKFGTASAEMVAYLWIAVENGKSMM
                     VCGGTASGKTATLNSAALFIRPGAKIVSIEDTREINLPHENWIPGTTRSGVGERGPDG
                     KAGGEIDMYDLVRAALRQRPNYIVVGEVRGKETYTMFQAMATGHPTMSTMHADSVKSM
                     VNRLENPPINTPRILLTALNFVIIQSHARIGDSIVRRMKQVVELVGFEPETNELITNT
                     VYEWDAATDTFVYKGHSFLFDEIMEMKNMTHEEMEAEFQRRVDIINYMLQKNLIDFRE
                     IAKIVVQYYQYPEDTAKRVREEMGWQDHAAMKAVDTGGETVG"
     gene            2309..>2987
                     /locus_tag="VNA10_00675"
     CDS             2309..>2987
                     /locus_tag="VNA10_00675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36221.1"
                     /translation="MGSSAFEKLETRGTLTKTKRFRPGEESDKGAHMVKLPKGAKPVN
                     VSLPPKAQVAWRMFGKFVQARTGSDPELEDNLLKAHIRLRPEEYLALAWMNTTFAAVG
                     AVVAAFVAALFLLILSIPVVTLLFIFALVAALPIFFSYMYAFGLPVGYHGKPAGMAKK
                     RGRKIDKRISGAMSFVSAMSSADVPVDVIFKELSKQTIYGEVAREAEWITRDTELLGM
                     DILTAIRK"
BASE COUNT          634 a          954 c          902 g          497 t
ORIGIN      
        1 cggaggcccg ttcaccgtct cgtttgacta cctgatccga ggcgtctcga cccatgtgca
       61 agagcaatcg aacgggtcca tcgaactgga tgtcgcgaat cggtactatg tcccccagaa
      121 gatcgcctac gagaacggag cggtcattcg ctaccaatcc gacggccagg tcatccgggc
      181 ccagccgacc ttcagtgtcg tgaagacgaa taacactctg gacatctcgt tcggcctcgt
      241 cagcttgtac ggagccggca gcgtctccgg gacgagcacg gaggtcgtga acacgcaagt
      301 gttcgccttc gaccgccaag attaccaggg attccccgcc aacgcggtga tctgggtcaa
      361 ccacacctcg cggtacggcc tctcctggta ccggttcctc aaccaaaccc tggcgagcgc
      421 cctcgtcctc ggcggcacgt tcacgcagac gccgctcgac atctcataca ccgcgaagat
      481 cggcgtcatt gtgatctaca aggtctccgc aagctacaat ccggccgcgc agacgtacac
      541 gatgcgcctc gagattcaca actcggcgct gctcgccctg agtttcttcc gcctgcagca
      601 cgcccaggtc caggtcggcg tgggagacac gagttcgaac gtccagttct agggtgaacc
      661 aagatgccga aacagaagaa gatcctcatg ccgcggggcg cgatccagca gaaggccgag
      721 tggtccggca cgcgcggctc ctacctcact cacatcccga atctcgcgcg cgacaccttg
      781 gaggaaatcg aggtcaaccc gatccgggag ccgttcactt actcgcgcgt catgtacgac
      841 cacgaccgct ccgaatacgt gtacgaggtc tgggagcccc agctcaactc ggaggagaaa
      901 gagttcctcg acatgatcaa ggactccctg aaccgcaccc tcgaatacga atgggacaag
      961 atggcggaga aggacaagaa agaatacctc caggaggccg tcgactcgtt cattcaatcg
     1021 cgcggcctgc gcctcgcccc cgcctcgaag gacaagatcg tctactacat catccgcgac
     1081 ttcgtcggat acggcccggt ggacgtcctc atgaatgacc tgcggatcga agacgtctcc
     1141 tgcgacggca cgggcatccc cctgttcatc ttccaccaga agttcgaatc gctcaagacg
     1201 aacgtcgtct tcgacgacga ggacgccctg aactcattcg ccgtcatgct cgggcagcga
     1261 tgcggcaagc aaatctccgt cgcgaacccg atcctcgacg ggacctcggt ggaaggccac
     1321 cgtgtccaag cgacgtacag caaggaggtc acgacccgcg ggtcgtcctt tacaatccgg
     1381 cggtacaagg ataagccctt cacgccggtc gaactcgtga agttcgggac cgcgagcgcc
     1441 gagatggtcg cgtacctctg gatcgccgtg gagaacggca agtcgatgat ggtctgcgga
     1501 gggacggcga gcggcaagac cgcgaccctg aacagcgccg ccctcttcat ccgaccgggc
     1561 gcgaagatcg tgtccatcga ggacacccgc gagatcaacc tgccccatga gaactggatc
     1621 ccggggacga cgcggtccgg ggtcggcgag cggggccccg acggcaaggc gggaggcgag
     1681 atcgacatgt acgacctcgt gcgagccgcg ctgcgccagc ggccgaacta catcgtcgtc
     1741 ggagaagtcc gcggcaagga gacgtacacg atgttccagg ccatggcgac gggccacccg
     1801 acgatgtcca cgatgcacgc agactccgtc aagtcgatgg tgaaccggtt ggagaacccg
     1861 ccgatcaaca cgccgcgcat cctgctgacc gcgttgaact tcgtcatcat ccagtcccac
     1921 gctcggatcg gcgactcgat cgtgcgacgg atgaagcaag tcgtcgagct cgtcgggttt
     1981 gagccggaga cgaacgagct catcacgaac acagtgtacg aatgggatgc cgcgacggac
     2041 accttcgtct acaagggcca ctcgttcctg tttgatgaga tcatggaaat gaagaacatg
     2101 actcacgagg aaatggaggc ggagttccag cgccgcgtcg atattatcaa ctacatgttg
     2161 caaaagaact tgatcgactt ccgagaaatc gcgaagatcg tcgtccagta ctaccagtac
     2221 ccggaggaca ccgcgaagcg ggtccgagag gagatgggct ggcaggacca cgcggccatg
     2281 aaggccgtgg acacaggagg cgagacggtt gggtagctcg gcgttcgaga aactcgagac
     2341 gcgaggcacg ctcacgaaga cgaagcggtt ccgccccggc gaggagtccg acaagggcgc
     2401 ccacatggtg aagctcccga agggagccaa gccggtcaac gtcagcctgc ccccgaaggc
     2461 tcaggtcgct tggcgcatgt tcgggaagtt cgtccaagcg cgaacaggga gcgacccgga
     2521 gctcgaggac aacctcctga aggcccatat ccggctccgg ccggaagagt acctggcgct
     2581 cgcctggatg aacacgacgt tcgcggccgt cggcgcggtc gtggccgcgt tcgttgcggc
     2641 cctcttcctg ctcatcctga gcatcccggt cgtcacgctc ctgttcatct tcgcgctcgt
     2701 cgcggcgctc ccgatcttct tctcgtacat gtacgcgttc ggcctcccgg tcggttatca
     2761 tggcaagccg gccggcatgg cgaagaagcg cggccgcaag atcgacaagc ggatctccgg
     2821 cgcgatgtcg ttcgtctcgg cgatgtcctc cgccgacgtc cccgtcgacg tgatcttcaa
     2881 ggagctctcc aaacagacga tctacggcga ggtcgcccgc gaggcggagt ggatcacccg
     2941 ggacacggag ctgctcggga tggacatcct gaccgcgatc cggaagg
//
LOCUS       DATLMA010000050         1061 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_486948, whole genome shotgun sequence.
ACCESSION   DATLMA010000050 DATLMA010000000
VERSION     DATLMA010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486948"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..>1061
                     /locus_tag="VNA10_00680"
     CDS             206..>1061
                     /locus_tag="VNA10_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG36222.1"
                     /translation="MTETSYTAKDITVLEGLEPVRLRPGMYIGSTGQRGLHHLLYEVV
                     DNSVDEALAGRNERIEVILHPDHSVTVRDWGHGIPVDFMPEQNLPALTVVLTKLHAGG
                     KFGGDGYKVSGGLHGVGVSVVNALSEWLAADVSRDGKAYRQEFARGVPKGDMEVVGDA
                     SPEETGTTISFMPDTEIFEEIDIDAGTVSQRMRETAFLTKGLTIKLTDERADGKTVEF
                     HYEGGIRDFVAYINEQKDPVHKHIVYFEGETDQGSVEVAMQWNNSYQESVFTFANNIN
                     TVEGGSHLS"
BASE COUNT          201 a          347 c          345 g          168 t
ORIGIN      
        1 ccgccggatc gcccggaagc taccctggaa caagcgcgcg aagcagccgc gtgggcgtcc
       61 gcgatcgagg acgaagagct ccgcgaactg gtcgctcgag cggcccgtgc gagcctcgcg
      121 cgggccgctg cagagcgccc gggcgaccgc tcgttctgat acacttgcat cagcccgcaa
      181 atgcggtatt tgcagggctt ttttcatgac tgaaacgtcc tatacagcaa aagacatcac
      241 cgttctcgag ggcctcgagc cggtccggct gcgcccgggc atgtacatcg gctcgacggg
      301 tcagcggggc ctccatcacc tcctctacga ggtcgtcgac aactccgtcg acgaggccct
      361 cgcgggacgc aacgagcgca tcgaggtgat cctccatccc gaccattccg tcacggtccg
      421 ggactggggt cacggcatcc cggtcgactt catgcccgag cagaacctgc cggcgctgac
      481 ggtcgtgctg acgaagctcc acgccggcgg caagttcggc ggggacggct acaaggtctc
      541 cggcggcctg cacggcgtcg gcgtgtccgt cgtgaacgca ctttcggaat ggctcgccgc
      601 ggacgtgagc cgcgacggca aggcctatcg gcaggagttc gcacgcggcg tcccgaaggg
      661 cgacatggag gtcgtcgggg acgcgtcgcc tgaggagacc ggcacgacga tctcgttcat
      721 gccggacacg gagatcttcg aggagatcga catcgatgcc ggcaccgtct cgcagcggat
      781 gcgtgagacc gcgttcctca cgaagggcct caccatcaag ctcaccgacg agcgcgccga
      841 cggcaagacg gtcgagtttc actacgaggg cgggatcagg gacttcgtcg cgtacatcaa
      901 cgagcagaag gacccggtcc acaagcacat cgtctacttc gagggcgaga ccgaccaggg
      961 ctcggtcgag gtggcgatgc agtggaacaa ctcctaccag gagtcggttt tcaccttcgc
     1021 caacaacatc aatacggttg agggcggctc gcatctctcc g
//
LOCUS       DATLMA010000051         1911 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_667987, whole genome shotgun sequence.
ACCESSION   DATLMA010000051 DATLMA010000000
VERSION     DATLMA010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_667987"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..545)
                     /locus_tag="VNA10_00685"
     CDS             complement(45..545)
                     /locus_tag="VNA10_00685"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HVG36223.1"
                     /translation="MKKEAIQTDLPAIGLPFSWGIRLQNFVFLAGHGPLGPDGKVIDG
                     DIRLQTRKTLENFRKVVEAAGSSLEHVVSTTVYLKDLEDFRGMNEVYAEFFAAEPRPA
                     RATVRADLLFGMKVEIQGIAFVPGGESLQSPGRIRSPMAKKKKSKKAAKKKAYYAGRK
                     EKKAKK"
     gene            complement(609..1814)
                     /locus_tag="VNA10_00690"
     CDS             complement(609..1814)
                     /locus_tag="VNA10_00690"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HVG36224.1"
                     /translation="MTTQVSFATRSLGPLQEVTERRPGLAIDAYPLGRLLLLRCFGDV
                     EGIDTAAEINGSGGKVLHATRSGDEVTLLLDGSGREEEIIASLADQSAHLIPPIRWQR
                     GEARVTLVLEDGANPEALLDQFPGARLVSKRRPMPTHGDRGAYSSPLFLHKLTEKQAR
                     ALLAAYGAGYYEFPRKATTEEISQSLGIARSTFEQHLNRAEHHVVRAMLPMVRMRSGL
                     ENGEALEVYSKFSRELGLYVQLEVLGDRVAAVRLTRKAPVETAGSDHPYLARILEHIH
                     TGKGDLRDIPLALEVAPFEREVLEFLRTIPPGETITYGEIARRLGRPGASRAVGTACA
                     RNPVVIVIPCHRVVPKSGGLGNYSSEGGPETKRRLLEREGARVGLEMKPHEAPGDRKS
                     RTSITHPRS"
BASE COUNT          296 a          640 c          601 g          374 t
ORIGIN      
        1 gttccggtac aacgacccgc gagcggttcc gcggttctag atgcctactt cttcgccttc
       61 ttttccttgc ggccggcgta gtaggctttc ttcttcgcgg ccttctttga cttcttcttc
      121 ttggccatcg gtgaccgaat gcgcccagga gattgaaggc tttcgcctcc cggcacgaat
      181 gcgatgcctt ggatctcgac cttcatgccg aagagcaagt cggctcggac agtcgcgcga
      241 gccggtcgcg gttcggcggc gaagaactcc gcgtacactt cgttcatccc ccggaagtcc
      301 tcgaggtcct tcagatacac ggtggtcgag acgacatgct cgaggctcga gcccgcggcc
      361 tcgacgacct tccggaagtt ctcgagcgtt tttcgggtct ggagccggat gtcgccgtcg
      421 atcactttgc cgtccggccc aagcggtccg tgccccgcga ggaacacgaa attctggagg
      481 cgtatgcccc acgagaacgg gaggccgatc gcagggaggt cggtctggat cgcttctttc
      541 ttcatgttcg cggtacctgc gtctccggat atgagtgttg acggccgcgg tgccgcgtcg
      601 acccgggatc aggaccgagg atgggtgatg ctggtccttg acttgcgatc tccaggcgcc
      661 tcgtgcggtt tcatctcgag ccccacgcgg gcgccttcgc gctcgaggag cctccgcttc
      721 gtttccgggc ctccctcgga ggagtagttg ccgaggcccc cggatttcgg caccacacgg
      781 tggcagggaa tgacgatgac caccgggttt cgggcgcacg cggtcccgac cgcgcgactc
      841 gctccgggcc gcccgagccg tcgcgcgatt tcaccgtacg tgatcgtctc gccgggcggg
      901 atcgtccgca agaactcgag cacctcccgc tcgaagggcg caacctccag cgcgagcgga
      961 atgtcccgca gatcgccctt tcccgtgtgg atatgctcga ggatccgcgc caagtacgga
     1021 tggtcggatc ccgcggtctc caccggcgcc ttccgggtca atcgcaccgc ggcgacgcga
     1081 tccccgagga cctcgagctg aacgtacagg ccgagctctc gactgaactt cgaatagacc
     1141 tccaaggcct ctccgttctc gaggccggat cgcatccgca ccatcggcag catcgcccgg
     1201 accacgtggt gctccgcccg gttcaggtgc tgttcgaagg tgctccgcgc aatgccgagg
     1261 gactgactga tctcctcggt cgtcgccttc cgagggaact cgtagtagcc cgccccgtat
     1321 gcggccagga gggcccgcgc ctgcttctcg gtgagtttgt gcaagaacag aggggacgaa
     1381 taggcccccc gatctccatg cgtcggcata gggcgccgct tcgacacgag gcgggctccc
     1441 gggaattggt ccaggagggc ctccgggttc gcgccgtcct caaggaccag cgtgacacgc
     1501 gcttcgcccc gctgccaacg aatcggcggg atgaggtgtg cgctctgatc tgcgagtgac
     1561 gcgatgattt cctcctctcg gccggagccg tcgagcagca gcgtgacctc gtctccgctg
     1621 cgcgttgcat gcaggacttt gccgccagaa ccgttgatct cggccgccgt gtcgattcct
     1681 tccacgtctc cgaaacaccg aaggaggagg agtcggccga gcggataagc atcgatggcg
     1741 aggcccggac gacgttccgt gacctcctga agtggcccca gggacctcgt cgcgaagctc
     1801 acttgtgtcg tcatgcgctg tgatcctccc cggcggaccc gaacgcccca tgccgcccta
     1861 gggccttagg gtttgtctcg ttggcacaca cgtcctccga gagcacggcc g
//
LOCUS       DATLMA010000052         1721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_5609,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000052 DATLMA010000000
VERSION     DATLMA010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5609"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..976)
                     /locus_tag="VNA10_00695"
     CDS             complement(<1..976)
                     /locus_tag="VNA10_00695"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36225.1"
                     /translation="MKLWIYVVRRLILLLPTLIGLTFLVFALERIGGTTLFLAQYIDP
                     HLTGTARQALIDQLTQRFHLNDPVYIQYFYWLGAIFQGDWGTSTTIRQPVVTGFLWFM
                     PNTIMLTLIASVLTWIISVPIGVYSAARRDSILDQGVRVATFTLYSMPLFLIGFGLFL
                     TLGAAWHILPYQFNVDLALLPSIPRAWFDDTNSVSYPTHILAVDAFLHGDWPIAWNAF
                     LHVILPALALALALLAGIIRILRASMLEVLEQDYVRLARAKGVPERTVNNFHAKKNAL
                     LPTVTSFGYLVSGLFGGAVVIEYIFTFKGIGWWTTFAFLRGDVGAVMGS"
     gene            complement(1019..>1721)
                     /locus_tag="VNA10_00700"
     CDS             complement(1019..>1721)
                     /locus_tag="VNA10_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG36226.1"
                     /translation="VKGLPYYVPPSSLVGCPNYDLVRAEALLNQSGMYNQVVNFPIII
                     PTGDTTDFTSSLVFAAALRAIDPNIVMSPVFLDFDTIIGLSVPGANPMPIYYLGWIAD
                     YPYPSDYTDAMYLEGGTYPGPNGWDHTYLNGLAATHPTQAALYNSQASAFVNLTAQIL
                     AADTQPNPTLAATEYAQAEQTAVSLYMYVYMVQTTGFWIVKPYITPYQGNWGYQTNPT
                     IGAGADSCFFWWVKG"
BASE COUNT          368 a          477 c          582 g          294 t
ORIGIN      
        1 tcgaacccat caccgcgccc acgtctccgc ggaggaaggc gaacgtcgtc caccagccga
       61 tgcctttgaa ggtgaagatg tactcgatga ccacggcgcc gccgaagagc cccgagacga
      121 gatagccgaa cgaagtcacg gtcggaagca acgcgttctt cttcgcatgg aagttgttga
      181 ccgtccgctc ggggacgccc ttcgcccgcg cgaggcgcac gtaatcctgc tccagcacct
      241 cgagcatcga ggcccggagg atgcggatga tgccggccaa gagcgccagg gcgagcgcca
      301 gcgcgggaag gatgacgtgt aggaacgcgt tccaggcgat cggccagtcg ccgtggagga
      361 aggcgtccac ggcaaggatg tgcgtcggat aggaaaccga gttcgtgtca tcgaaccacg
      421 cccggggaat cgatggaagg agcgcgaggt cgacgttgaa ctgatagggg aggatgtgcc
      481 aggcggctcc cagcgtcagg aagagcccga aaccgatgag aaagaggggc atcgagtaca
      541 gggtgaacgt cgcgactcgg acgccctggt cgaggatcga gtcccgccga gcggccgaat
      601 acacgccgat cgggaccgag atgatccagg ttagaaccga ggcgatcagc gtcaacatga
      661 tcgtgttcgg catgaaccag aggaaacccg tcacgacggg ctgtcggatt gtcgtcgagg
      721 tcccccaatc cccttggaaa atggcgccca gccagtagaa gtactggatg tacacgggat
      781 cgttcagatg gaaccgctgc gtcagctggt cgatgagtgc ttgccgggcg gtcccggtga
      841 gatgcggatc gatgtattgc gcgagaaaca gggtcgttcc gccgatccgc tcaagtgcga
      901 agacaagaaa cgtcaggccg atcagcgttg gaagaaggag gatgagtctg cggacaacat
      961 agatccagag tttcacaccg gtcgctccga aaaaagagtc tggaagggta gaaaaaggtt
     1021 accccttaac ccaccagaag aagcacgaat cggctcccgc cccgatcgtc ggattggtct
     1081 ggtagcccca attgccctgg tacggcgtga tgtagggctt cacgatccag aagcccgtcg
     1141 tctggaccat gtagacgtac atgtagaggc tgaccgccgt ctgctccgcc tgggcgtatt
     1201 ccgtcgcggc gagggtcggg ttcggctggg tgtctgcggc gaggatctgg gcggtcaggt
     1261 tcacgaacgc cgaggcttgg ctgttataga gcgcggcctg cgtcggatgc gtcgccgcga
     1321 ggccgttcag gtaggtatgg tcccacccgt tcggtcccgg gtacgttccg ccttcgaggt
     1381 acatcgcatc cgtgtagtcg gacggatacg ggtagtccgc gatccagcca agatagtaga
     1441 ttggcatggg gttcgcgccc ggaaccgaga gcccgatgat cgtgtcgaag tcgaggaaca
     1501 ccggtgacat cacgatgttc gggtcgatcg ccctcagggc cgcggcaaag acgagcgagg
     1561 acgtgaagtc cgtggtgtcc ccggtcggga tgatgatcgg gaagttcacc acctggttgt
     1621 acatccctga ttggttcaga agggcttccg cccgcacgag gtcatagttg ggacagccga
     1681 cgaggctact cggcgggacg tagtacggca agcccttcac g
//
LOCUS       DATLMA010000053         3079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_789166, whole genome shotgun sequence.
ACCESSION   DATLMA010000053 DATLMA010000000
VERSION     DATLMA010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_789166"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VNA10_00705"
     CDS             <1..399
                     /locus_tag="VNA10_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36227.1"
                     /translation="IVLNGDNPVGTEVKVRSQFVPSPLLAKLIPMTRGGDVVGTLGAH
                     TKKTATKTPARTTTIATTRTTTMRARFSDAGGGGGVNTIPGGAGIVPDTTDPGNGVPH
                     WEQNRFAGAFGVPQRGQTAVADVQTLQPVE"
     gene            502..1731
                     /locus_tag="VNA10_00710"
     CDS             502..1731
                     /locus_tag="VNA10_00710"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008086819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HVG36228.1"
                     /translation="MDARKILLVIFDGLGDRPLTELGHKTPLEATPKPNLDWFASNGV
                     NGLVDPIAPGVAAGSDTSHLALFGYDPHEVYTGRGPFEAAGVGIDLEPGDIAFRGNFA
                     SVDEEMKLTDRRAGRIREGTEELAKALDGLKLGRIKATVRAGTEHRVAVVLRGRGLSP
                     RVTDTDPHEIGEAIVESKPLESAAKVTAKAVNAFTKQAYKILKSHPVNRARVAKGEPP
                     ANAIVLRGAGVFPDLVPITERFHLTAAGIAGVALVRGMFRTIGMDVIDVPGATGGLDT
                     DMIAKADAALDALRSHDLVVLHVKAPDLCGHDGNASEKIRVIERMDAMMGHLKAALST
                     DVVVALTSDHSTPVALKDHSGDPVPLTIFGEGVRVDEVLNFDERSMAHGALGRLRGTD
                     VMNVLLNVSNRVEKYGA"
     gene            1790..>3079
                     /locus_tag="VNA10_00715"
     CDS             1790..>3079
                     /locus_tag="VNA10_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HVG36229.1"
                     /translation="MDAIAQIDLSFIIPIAILVGLGFAGILTRDILRRDTGSERMREI
                     AGAIQQGARAFLRRQYKTIALIAAFLAILFAVALGAQKGFVLGLETAGAFVLGATLSA
                     LSGYLGMHIAIRSNIRSAAGSLKSFNDALVIALRGGAVSGLSIVSMSLAGVALLYYGY
                     GALGPAINATTYNTCISAGHTVAQCTAQATEDSLILSIVGFGFGASLVALFAQLGGGI
                     YTKAADVGADLVGKVEAGIPEDDPRNPAVIADLVGDNVGDCAGRGADLFESTAAENIG
                     AMVLGVVLFPYFGIAGVIFPLVARSFGLLASIVGVFVVRAREDEAPMSALNRGYIVAS
                     VLAAILFGIAAWAMLQPSSPTASGGLTWVYYWACGIAGMMTAVIYVWVTQYYTEARYR
                     PVRDIAKSSETGPATNIISGFAVGLEATAIPAVVVSIA"
BASE COUNT          546 a          984 c         1027 g          522 t
ORIGIN      
        1 atcgtgttaa atggagacaa tcccgtcggg accgaggtga aggtgagaag ccagttcgtc
       61 ccgtcgccgc tcctggccaa actgattcca atgacccggg gaggagacgt cgtcgggaca
      121 ctgggcgccc acacgaagaa gacggcgacg aagacgccgg ccagaaccac cacgatcgcg
      181 accacgagga ccacgacgat gagggccagg ttctctgacg cgggtggcgg gggcggagtg
      241 aacacgatcc caggcggcgc cgggatcgtc ccggacacga cggaccctgg taacggagtc
      301 ccgcattggg agcagaaccg gttcgccggt gcattcggcg taccacagcg tggacagacg
      361 gcggtcgcgg acgtgcaaac cctccaaccg gtggaatagg tccgccggcg ggaaatatct
      421 tcgcgcaaat gttcatgccg cagaccgatc gccctcgtcc cagcaaagac atatctaggg
      481 accggacctt gggcggccga aatggatgcg cggaaaatcc tgctcgtcat tttcgacggc
      541 ctgggggatc gaccgctcac cgaactcggg cacaagacgc ccctcgaggc gaccccgaag
      601 ccgaacctcg attggttcgc gtcgaacggc gtgaatggac tggtcgatcc gatcgcgccc
      661 ggcgtcgcgg cggggagcga cacgagccac ctcgcgctct tcggatacga tccgcacgag
      721 gtctatacgg gccgcggacc gttcgaggcg gccggcgtcg gcatcgacct cgaaccgggg
      781 gacatcgcgt tccgagggaa cttcgcgtcc gtcgacgaag agatgaagct cacggaccgc
      841 cgcgccggtc ggatccgcga agggacggag gaactggcga aggccctcga cggcctcaag
      901 ctcggtcgga tcaaggcgac ggtgcgagcc gggaccgaac accgcgtcgc ggtcgtcttg
      961 cggggccgag gcctctcccc gcgggtcacg gacacggatc cccatgagat cggcgaggcg
     1021 atcgtggaat cgaaacccct cgaatccgcg gcgaaggtca ccgcgaaggc cgtcaacgcc
     1081 ttcacgaaac aggcctacaa aatcctcaag tcccatccgg tgaaccgcgc ccgggtcgcg
     1141 aagggcgaac cgcccgcgaa cgcaatcgtg ctgcgcgggg ccggcgtctt ccccgatctc
     1201 gtcccgatca cggagcggtt ccacctgacg gcggcgggga tcgcgggcgt cgcgctggtc
     1261 cgcgggatgt tccggacgat cggcatggac gtgatcgacg ttcctggagc gacgggcggc
     1321 ctggacacgg acatgatcgc gaaagcggac gcggccctgg acgccttgcg gagtcacgat
     1381 ctcgtcgtcc tccatgtgaa ggcgccggat ctgtgcggtc acgacgggaa cgcgtccgag
     1441 aagatccggg taatcgagcg gatggacgcg atgatgggcc atctgaaggc ggcgctgtcc
     1501 accgatgtgg ttgttgctct gacctccgac cactcgaccc ccgtcgcttt gaaggaccac
     1561 tccggggatc cggtgcccct cacgatcttc ggcgaagggg tccgcgtgga cgaggtcctc
     1621 aacttcgacg agcgcagcat ggcccacggc gccctcggtc gactccgcgg gacggacgtg
     1681 atgaacgtcc tcttgaatgt ctcgaaccgc gtcgagaagt acggcgcctg agcgacccgt
     1741 caaagcctaa atacgaggag gaacttgcgg ccgcgcctac ggcggaggag tggacgccat
     1801 cgcgcagatc gacctgagct tcatcatccc gatcgcgatc ctcgtagggc tgggtttcgc
     1861 gggaatcctg acgcgggaca tcctccgacg tgacacgggc tcggagcgga tgcgggagat
     1921 cgcgggcgcg attcagcagg gagccagggc cttcttgcgt cgccaataca agacgatcgc
     1981 tctgatcgcg gccttcctcg cgatcctttt cgccgtggcc ctgggcgctc agaagggatt
     2041 cgtcctcggg ctcgagactg ccggggcgtt cgtcctcggc gcgacgctct ccgctctatc
     2101 gggttacctc gggatgcaca ttgccatccg ctccaacatt cgttcggccg caggttctct
     2161 caagtcgttc aacgatgccc tcgtgatcgc tctgcggggt ggcgcggtct ccgggttgtc
     2221 gatcgtgagc atgtccctcg ccggcgtcgc cctcctctac tacggatatg gtgccctcgg
     2281 gcctgcgata aacgccacga cctacaacac ctgcatctcc gcgggccaca cggtcgcgca
     2341 atgcacggct caggcgaccg aagacagcct catcctttct atcgtcggct tcgggttcgg
     2401 ggcgagcctc gtcgccttgt tcgcccaact cgggggcggc atctacacga aggcggctga
     2461 cgtcggggcg gacctcgtgg gcaaagtgga ggcgggcata ccggaggatg atccgaggaa
     2521 ccccgccgta atcgccgatc ttgtggggga caacgtcgga gattgtgccg gccgcggtgc
     2581 ggacttgttc gagtcgaccg ccgcggaaaa catcggcgca atggtcctcg gcgtcgttct
     2641 cttcccgtat ttcgggatcg cgggcgtgat cttcccgctc gtcgctcggt cgtttgggct
     2701 tctggcgagc atcgtcggtg tgttcgtggt tcgggcgcga gaggacgagg cgccgatgag
     2761 tgccttgaac cgaggataca tcgttgcatc ggtcctcgcc gcaatcctgt tcggcattgc
     2821 ggcgtgggcg atgttgcaac cgtcctcccc aaccgcgtcg ggaggactca cctgggtata
     2881 ctactgggcc tgcggcatcg ccggcatgat gacggcggtc atctacgtct gggtcaccca
     2941 gtactacacg gaagcccgct accggcctgt gagggacatc gcgaaatcgt cggagaccgg
     3001 acctgcgacg aacatcattt ccggattcgc cgtcggtctc gaggcgaccg cgatccccgc
     3061 agtcgtcgtg tcgatcgcg
//
LOCUS       DATLMA010000054         3164 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_246379, whole genome shotgun sequence.
ACCESSION   DATLMA010000054 DATLMA010000000
VERSION     DATLMA010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246379"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..677
                     /locus_tag="VNA10_00720"
     CDS             294..677
                     /locus_tag="VNA10_00720"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG36230.1"
                     /translation="MAEQPKTGSIVHVEFHVKEPKKVEKFYAAVFGWKFQGVPGIDYS
                     LFQAASGPGGGVGGLQPGNWQPGVINYLSVPSVDEYQEKVKKAGGKIIVPKAEVMGQG
                     WFAVFEDPSGTRLALWQQNPNAPQM"
     gene            764..1150
                     /gene="msrB"
                     /locus_tag="VNA10_00725"
     CDS             764..1150
                     /gene="msrB"
                     /locus_tag="VNA10_00725"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017661733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HVG36231.1"
                     /translation="MEKLDKAKLKQQLSPLQYDVVVNKGTERPFTGEYWDNHDSGVYL
                     CVVCGNELFASGTKFDSRTGWPSFWAPVQEGNVREKEDRSLFMRRTEVECANCGAHLG
                     HVFDDGPRPTGLRYCINSASLKFQQR"
     gene            1335..1607
                     /locus_tag="VNA10_00730"
     CDS             1335..1607
                     /locus_tag="VNA10_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015735421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HVG36232.1"
                     /translation="MCRNIRTLFNFDPPATDDEVREASLQFVRKLSGFAKPSRANEAA
                     FHRAIEDVTAVARKMLDSLVTDAEPRNREVEAARAHARAAERFGTS"
     gene            1760..>3164
                     /locus_tag="VNA10_00735"
     CDS             1760..>3164
                     /locus_tag="VNA10_00735"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HVG36233.1"
                     /translation="MERSKRVFAALTASALLFLLSLTIVGSNASANLRVAQAGNVIVP
                     AAPTNNFDQFVIVLMENHDISDIYGPAPYMTQLADQNAFSQHWASITNPSQPNYIALI
                     GGSTFGVSGDGNHPNLNYPTLVDIIENSGHTWNAIAEGSGSGCSINPNRGEDHFPFLS
                     YTTITGNTARCANLHSGGPTDVVAALNAGTSFIWFTPNDSHNMHDNSVASGDSWLQSW
                     VPGLLSAMAGKHATLFITYDEGYASPPLVYSGFSGPSAKQAYKSTTSYSHYSLLKLIE
                     DVWGGGNLGQGDVNAASPLEFFGAGGPPVPDFSIAANPGSVSFIPSQSATSTITLTST
                     GGFTGSVALSLASAPAGVTGSCAPSSISGSQASSCTLTGTTAGSYAVTVTGTSGSLVH
                     TTSIAATVTSNPPPGGGPSGGRDPLLWPFSRDSIWNLPIGSSAVYVPANILQATQRGM
                     TTDPDVIILTPNATVTAV"
BASE COUNT          631 a         1016 c          941 g          576 t
ORIGIN      
        1 gtccagcgtt acgagattcc acatgatgag tcttctcatg tgattcaccc gattccaggg
       61 aggtcaattg catacgcagg atatatctcc gcgcagcggc gagatcttcc ggtcatgagc
      121 ggcacctcat ttctcgctcc aagagagacg cgcaaggcga gtcgcctcgc aagaatcccg
      181 cttgagcttg ggacattctc cggggtccga caggttgccg tcgtagtttc gacgacccct
      241 ctcgaatacc gttatatatc cgagcggtct cggcgcgtcc acgaggtaag acaatggcag
      301 agcagccaaa aaccggaagc atcgtacacg tcgagttcca cgtcaaggaa ccgaagaaag
      361 ttgagaaatt ctatgccgcg gtgttcgggt ggaaattcca gggagtcccg ggaatcgact
      421 attcgctgtt ccaagcggcc agcggcccgg gcggcggcgt cggaggactt caaccgggca
      481 actggcagcc gggagtcatc aattacctct ccgtcccctc ggtcgacgag taccaggaga
      541 aggtcaagaa ggccggcggg aagatcatcg tgccgaaggc cgaggtcatg ggccagggct
      601 ggttcgccgt gttcgaggat ccatcgggca cccggctggc cttgtggcag cagaatccga
      661 acgcgcccca gatgtaggaa gggccacttc ggacccgaaa tcggctcctt tgcccgcgcg
      721 atcgagccga aaccttaagg ccccggaggg ttcgtccctg cccatggaga agctcgacaa
      781 ggcgaagctg aagcaacagc tctcgccgct tcagtacgac gtcgtcgtga acaaggggac
      841 cgagcgaccc ttcaccggag aatactggga caaccacgat tccggcgtgt acctgtgcgt
      901 cgtctgcggg aacgaactct tcgcatcggg gaccaagttc gactcgagga ccggctggcc
      961 gagcttctgg gctcccgtcc aggaaggaaa tgtccgcgaa aaggaggatc gcagcttatt
     1021 catgcgccgc acggaggtcg aatgcgccaa ctgcggtgcc cacctgggac acgtattcga
     1081 cgacgggccg aggccgaccg ggttgcggta ctgcatcaac tccgcgtccc tcaagttcca
     1141 acagcggtag tcaccgtccg cgcccgttcg ctgcctggcc ccgatcccga ggaactcgca
     1201 atcatgaatt cgcgatgacc cgggtctctt tggtgacttc gccgagagcc acgaaaggaa
     1261 gcggatgccg ccaggcaaag gactttgggg gattccacag ttcagctcgg ccggacgacc
     1321 tggagagaaa taccatgtgt cggaacatca ggacgctctt caacttcgac cctcccgcca
     1381 ccgacgatga agtccgagaa gcctcgctcc aattcgtgcg gaagctgtcg ggcttcgcca
     1441 agccctcgcg ggcgaacgag gcggcgttcc atcgcgcgat tgaggacgtg accgccgtgg
     1501 cgcggaagat gctggattcg ctcgtgaccg atgcggagcc gcgcaatcgc gaggtcgagg
     1561 cggcgcgggc tcatgcgaga gccgcggaac ggttcggaac ctcgtaggac tcgggccgac
     1621 gaagctcatt acgagtccgt accaatactt cgtctcgtat cgaatcgtgt tatccatacc
     1681 gattatcgga acatgctggt cgggagaata ctaacatgcc cgggacctct gatgttgctg
     1741 gcctccggga aaacacgcaa tggaacgctc gaagcgcgtg ttcgcggccc ttacggcctc
     1801 cgctctcctc ttccttctga gcctcaccat cgtcggctcg aacgcctccg cgaatctgag
     1861 ggtggctcag gccgggaacg tcatcgtccc cgccgcgccg acgaacaact tcgatcagtt
     1921 cgtgatcgtc ctcatggaga accacgacat ctcggacatc tacggcccgg ccccgtacat
     1981 gactcaactc gcggaccaga acgccttctc gcagcattgg gcgagcatca cgaatccttc
     2041 tcagccgaac tacatcgctc tgatcggcgg gagcaccttc ggcgtctccg gcgacgggaa
     2101 ccatccgaac ctgaattatc caaccctcgt cgacatcatc gagaactcgg gccacacttg
     2161 gaatgcgatc gcagaaggca gcggctccgg ctgttccatc aacccgaatc gaggcgagga
     2221 ccacttcccg ttcctgtcct acacgacgat caccggcaat accgcgcgat gcgcgaacct
     2281 ccactccggc ggcccgacgg acgtcgtcgc ggcgctgaat gccgggacta gcttcatctg
     2341 gttcacgccg aacgacagtc acaacatgca cgacaattct gtcgcgtcgg gcgattcgtg
     2401 gctgcaaagc tgggtgcccg ggctcctgag tgcgatggct gggaagcatg ccacgctctt
     2461 catcacgtac gatgaagggt atgcgagccc gccgttggtc tactccggtt tcagcggccc
     2521 gtctgcgaaa caggcataca agtccacgac atcgtactcc cactactctc tgttgaaact
     2581 gatcgaggac gtctggggtg gcgggaacct tggccagggc gatgtcaacg ccgcgtcgcc
     2641 gctggaattc ttcggggcgg gtggtccgcc cgtgccggac ttctcgatcg cggcgaaccc
     2701 tggaagcgtc tcgttcatcc cgagtcaatc cgcgacctcg acgatcacgc tcacctcgac
     2761 gggcggtttc accgggagcg tggcactcag cctggcgtcg gcccctgcgg gagtgaccgg
     2821 ttcctgcgcg ccgtcgtcca tcagcgggag ccaagcgtcc tcatgcacgt tgaccggcac
     2881 gacggccgga tcgtacgccg tcacggtgac aggcaccagt ggctcgctcg tccacacgac
     2941 ctcgatcgct gcgacggtca catccaatcc gccacccgga ggtggcccgt ccggcggccg
     3001 ggatccgctc ctctggccct tttcacgaga cagcatctgg aatcttccga tcggatcctc
     3061 tgcggtctat gtccccgcga acattctaca ggcgacccag cgcgggatga cgaccgaccc
     3121 ggacgtgatc atcctcacgc cgaacgccac tgtgaccgcg gtct
//
LOCUS       DATLMA010000055         1211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_6177,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000055 DATLMA010000000
VERSION     DATLMA010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6177"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VNA10_00740"
     CDS             <1..360
                     /locus_tag="VNA10_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG36234.1"
                     /translation="SNQGIVFAADYFFVPKFAAHSDLGKRLAQWLASKDAQTIQVRVG
                     GHIATAAGVPASAYPALDAQVASLMTGKAVLTDLDDTIGNPFQGHFWSELQSLWANPA
                     NWQTVLANIQAAAQAQP"
     gene            420..>1211
                     /locus_tag="VNA10_00745"
     CDS             420..>1211
                     /locus_tag="VNA10_00745"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HVG36235.1"
                     /translation="MGRWARSQAKFLSFFLPAAIFLIVLVVYPVVATLTLSFVAPDGS
                     YAGLQNYGSVLGSPDTFNPACLQRGPPCGTLLNNLIWIGIHLPLTVFMGLFLAVLLQN
                     VRGASFVKSLIFLGMVTPLIVVGVVLRFVLEYPIGLVPAFFGWLGVKSLDVNWLVTPN
                     TLLLGLIFGTVWSWTGFSMIVYSAGLTTIPKDYFEAARVDGATEWQVFRKITWPLLRP
                     VTLVIVTMTLLWELKLFDIVIGATNSQGGVGGAADVLALQMYRYFF"
BASE COUNT          175 a          403 c          365 g          268 t
ORIGIN      
        1 tcgaaccagg gcatcgtgtt cgcggccgac tacttcttcg tgccgaagtt cgccgcgcat
       61 tccgatctcg ggaagcgcct cgcccagtgg ttggcatcca aagacgccca gacgatccag
      121 gttcgggtcg gcggacacat cgccaccgcg gcgggggtcc cggcgtcggc ctatccggcg
      181 ctcgacgccc aggtcgcgtc cctgatgacc gggaaggccg tcctgacgga cttggacgac
      241 acgatcggca atccgttcca gggtcatttc tggagcgagc tgcagagcct ttgggcgaat
      301 ccggccaact ggcagaccgt cctggcgaac atccaggccg ccgcgcaagc gcaaccatga
      361 aagttccggg aggcgggttt ttttcccgcc tcgtctcccg gcgtggcggt cgcgttccga
      421 tgggccgttg ggctcggtcg caggcgaagt ttctgtcctt tttcctccct gcggcgatct
      481 tcctgatcgt cctcgtcgtc tatccggtcg tggccaccct caccttgagt ttcgtggccc
      541 ctgacggtag ttacgcgggc ctccagaact acggttccgt cctggggtcg ccggacacat
      601 tcaatccggc ctgcctccag cgcggtcctc cctgcgggac cctcctgaac aacctgattt
      661 ggattggcat tcacctcccg ctgacggtct tcatgggcct gttcctcgcc gtcctactcc
      721 agaacgtgcg cggggcctcg ttcgtcaagt cgctcatctt cctcgggatg gtcacaccgc
      781 tcattgtcgt cggggtcgtg ctgcgattcg tcctcgagta cccgatcggg ctcgtcccgg
      841 cattcttcgg gtggctcggg gtcaagtcgc tcgacgtcaa ctggctcgtc acgccgaaca
      901 ccctcctcct cgggctgatc ttcgggaccg tttggtcgtg gaccggcttc agcatgattg
      961 tgtactcggc gggcctcacg acgatcccga aagactactt tgaggcagcc cgcgtcgacg
     1021 gcgctacgga gtggcaagtc ttccgaaaaa tcacgtggcc gttgcttcgt ccggtcaccc
     1081 tcgtcatcgt cacgatgacc cttctgtggg aactcaagtt gttcgacatc gtcatcgggg
     1141 ccacgaattc gcaagggggc gtcggcgggg cggcggacgt gcttgccctc cagatgtatc
     1201 ggtacttctt c
//
LOCUS       DATLMA010000056         1144 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_487571, whole genome shotgun sequence.
ACCESSION   DATLMA010000056 DATLMA010000000
VERSION     DATLMA010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487571"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VNA10_00750"
     CDS             complement(<1..240)
                     /locus_tag="VNA10_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HVG36236.1"
                     /translation="MAQGREVEVKFRRDLGLLEITMIGLGPTIGTTIFLLVGPGFAIT
                     GPSLVLAFGLNFVVTMFTAMAYMELGSAFPETGGGY"
     gene            complement(269..652)
                     /locus_tag="VNA10_00755"
     CDS             complement(269..652)
                     /locus_tag="VNA10_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008084755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase family protein"
                     /protein_id="HVG36237.1"
                     /translation="MADDPTREYFAGSDRDRAAFEAGIKLGSIAHQYVGTPLTSASAP
                     SLERAIEAATKVQPLVERIRVRIDRKRMRVRGPYRYGVLTEDLLDVEVAVRVGSARAV
                     GTLRYVPELDYPLMYLKAIGGPTKD"
     gene            828..>1144
                     /locus_tag="VNA10_00760"
     CDS             828..>1144
                     /locus_tag="VNA10_00760"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00725 family protein"
                     /protein_id="HVG36238.1"
                     /translation="MARKPIIGVIGGGSTASADGLALAEEVGFLIARADAVLICGGLN
                     GVMEASAKGAKRGGGLTIGVLPTGNKADANPYIDLPIATAMSTARNLVIVRTADAIIA
                     VNGS"
BASE COUNT          216 a          367 c          365 g          196 t
ORIGIN      
        1 atatccgccc ccggtctccg ggaacgcgga gccgagctcc atgtacgcca tcgcggtgaa
       61 catggtcacg acgaagttca ggccgaatgc caggacgagc gaaggacccg tgatcgcgaa
      121 gccgggcccg acgagcagga agatcgtggt cccgatcgtc gggccgagcc cgatcatcgt
      181 gatttccagg agcccgaggt cccgccgaaa cttgacctcg acctcgcggc cctgcgccat
      241 cgggtcgcgg cagaatggga gtcccttatt agtccttggt gggcccgccg atggctttca
      301 aatacatgag tggatagtcg agttccggaa cgtaccggag cgttccgacg gcccgcgcgg
      361 agccgacgcg cactgcgact tcgacatcca acaggtcctc cgtcaacacg ccgtaccggt
      421 agggtccacg gactcgcatc cgcttccggt cgatcctgac ccggattcgt tcgacaagcg
      481 gttgcacctt cgtcgcggcc tcgatcgcgc gctcgagcga tggcgcgctc gctgaggtca
      541 agggcgttcc gacgtactgg tgggcaatcg agcccaactt gattcccgcc tcgaaggcgg
      601 ctcggtcgcg gtcactcccg gcgaaatact cgcgggtcgg gtcgtcggcc atcacggtcc
      661 ccaagcgcga caatgcccgc gtcggcatta aggccgacgg agagagtgac tccgcgattc
      721 accacaagat ggtgatccat tccccgatgt gcaatgggag cgtatcaaaa gtcgattgac
      781 agcggcaaag gcttaattcg gtcgcgagct tgaacggaga ttccctcatg gcgcggaagc
      841 caatcatcgg tgtaatcgga ggcggcagca cggcctccgc cgacggtctt gcccttgccg
      901 aggaagtcgg attcctcatc gcacgggccg atgcggtcct gatctgtggc ggcctgaacg
      961 gcgtcatgga ggcgtccgcg aagggcgcga agcgcggcgg cggtcttacg atcggcgtcc
     1021 tgccgaccgg gaacaaggcg gacgcgaatc cctatatcga cctcccgatt gcaacggcga
     1081 tgagcaccgc gcgaaatctc gtcatcgtcc gtaccgccga cgcgatcatc gcggtgaacg
     1141 gctc
//
LOCUS       DATLMA010000057         3087 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_729173, whole genome shotgun sequence.
ACCESSION   DATLMA010000057 DATLMA010000000
VERSION     DATLMA010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729173"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1258)
                     /locus_tag="VNA10_00765"
     CDS             complement(<1..1258)
                     /locus_tag="VNA10_00765"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF005558.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HVG36239.1"
                     /translation="MGETLTHKLIRSHLADGRMNPGDEIALRMDQALLQDATGTLAWL
                     EFEQMGQDDVAIRQATQYVDHNILQTGYENADDHRFLRSVCQRYGAIFSGPGNGISHW
                     AHMERFDIPGETMLGCDSHTPHAGACGMLAIGAGGFEVASAMAGEPYRLTMPEVVQIK
                     LTGKFKPWVSAKDVILELLNRFDVKWAKNKVLEYAGPALKELSVPSRGTIANMGTELG
                     ATGSVFPADGLTKEFLTAQARAKDFKLLEADDDARYDDTVDIDLGTLEPLIACPSSPD
                     NVKPVSEVSGTEVAQVAVGSSVNSSFRDLGVVAHALDGKHVAPGIAMAVSPGSRQTLL
                     LMLTSGLMTKLIKAGVRELEVACGPCIGMGFAPPTKGPSVRTFNRNFEGRSGTADDLV
                     YLCSPETAAATAVRGVITDPRELGKYP"
     gene            1428..2387
                     /locus_tag="VNA10_00770"
     CDS             1428..2387
                     /locus_tag="VNA10_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005556290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HVG36240.1"
                     /translation="MAKYFVTGATGFIGGRVTRQLVDGGHEVVAIARNPERAKDLVSL
                     GVDIRPGDITDPDSLRGPMAGVDGVFHIAGWYKIGSKDRAAGERINIVGTRSVLTAMR
                     ELGIPKGVYTSTLAVFSDTHGQLVDETYRSAGPWLTEYDRTKWAAHYEVAEPMIRAGL
                     PLVIVQPGVNYGPGDTSEIRPLIVRYLQRKLRALPKRTAYCWAHVDDTARGHLLAMEK
                     GAVGQAYIIAGWPHTLIDAFDLAERITGIPAPRFHASPGLIRALAAISRSERLRVAAG
                     VTYLGSNAKARRELGFAPRPLEEGLRETLRHEMRLLGIDSAAS"
     gene            2457..>3087
                     /locus_tag="VNA10_00775"
     CDS             2457..>3087
                     /locus_tag="VNA10_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009944606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein T"
                     /protein_id="HVG36241.1"
                     /translation="MPYNDGQSTLFFGPWYRKSPFFEATQRAGAKAYDIYNHMYLPGL
                     YTDPFEEYWHLINHVTLWDVSVERQVEISGKDGAKFAELITPRDLTKCDVGQGKYVVI
                     TDENGGIINDPVLIRLEKNRFWLSLANSDTLLWAKGVAVNSGMDVDISEPDVSPLQVQ
                     GPDSKNVLKDLVGPAVLDLGYYYFMSTKIDGIPVVVTRTGWTAEVGYEVY"
BASE COUNT          551 a          949 c          996 g          591 t
ORIGIN      
        1 ccggatactt gccgagctcc cgtggatccg tgatgactcc gcgaaccgcc gtcgctgccg
       61 cggtctcggg gctgcacagg tagacgaggt cgtccgcggt cccgctccgt ccctcgaagt
      121 tgcggttgaa cgtgcggacg gaaggccctt tcgtcggagg agcgaaaccc atcccgatgc
      181 acgggccgca cgccacctca agttcgcgga cgccggcttt gatgagtttc gtcatgaggc
      241 cgctcgtcag catcaggagc agggtctgcc gggaacccgg ggagacggcc atcgcaatcc
      301 cgggggcgac gtgcttccca tccaaggcat gggcgacgac gccgaggtcc cgaaacgacg
      361 agttcacgct gctcccgacg gccacctggg cgacctcggt cccggagacc tcgctgacgg
      421 gcttgacgtt gtccggactc gatggacatg cgatcagcgg ttcgagcgtg ccgaggtcga
      481 tatcgaccgt gtcgtcgtaa cgggcgtcgt cgtccgcttc gagcagcttg aaatctttcg
      541 ctcgggcctg agcggtgagg aactctttcg tcaagccatc cgccgggaac accgaacctg
      601 tcgcgccgag ctccgtgccc atgttcgcga tcgtcccccg ggatgggacg ctcaactcct
      661 tcaacgcggg acccgcgtac tcgaggacct tgttcttcgc ccatttcacg tcgaagcggt
      721 tcaggagttc caagatcacg tccttcgcgc tcacccacgg tttgaatttc cccgtgagtt
      781 tgatctggac cacctcgggc atcgtcagcc ggtacggttc gcccgccatc gcgctcgcga
      841 cttcgaagcc acccgcaccg atcgcgagca tgccgcaggc gcccgcatgc ggcgtgtggg
      901 agtcgcagcc gagcattgtc tcccccggaa tgtcgaaccg ctccatgtgg gcccagtggc
      961 tgatgccgtt tccgggtccc gagaagatcg ccccatatcg ctggcacacg ctccgcaaga
     1021 agcggtggtc gtccgcgttc tcgtatccgg tctggaggat gttgtggtcc acgtactgcg
     1081 tcgcctgccg gattgcgacg tcgtcctgtc ccatctgctc gaactccagc cacgcgagcg
     1141 tgcccgtcgc atcctggagg agcgcctgat ccatccggag tgcgatctcg tcgccaggat
     1201 tcatccggcc gtcggcgaga tgagaacgga tgagtttgtg ggtgagggtt tcccccatag
     1261 aaacttctcc ggcgcgtggt gagaccctcg taccctatca aggttgatgc gtacgaaccg
     1321 tgacagattc cgatgttacc cttaaacaag gttgattcag cggcgctttg acatctcatt
     1381 gtgggcagcg ttatttagcc cgagtcactt cgaccgcgcg agggcggatg gcgaagtact
     1441 ttgtgacggg ggccaccggc ttcatcggcg gtcgcgtcac ccggcagctg gtcgatggcg
     1501 gccacgaggt tgtcgcgatc gcccggaacc cggaacgcgc gaaggacctg gtctcgctcg
     1561 gggtcgatat ccgtccggga gacatcacgg atccggattc gctgcgcggc ccgatggccg
     1621 gcgtcgatgg cgtgttccac atcgcgggct ggtacaagat tggatcgaag gaccgcgcgg
     1681 cgggcgagcg gattaacatc gtgggtaccc ggagcgtgtt gaccgccatg agggagctcg
     1741 gcattccgaa aggggtctac acgagcacgc tcgcggtgtt ttccgacacg cacggtcagc
     1801 tggtagacga gacgtatcgg agcgccggtc catggctgac ggagtacgac cgaacgaagt
     1861 gggcggccca ctacgaggtt gcggagccga tgatccgtgc gggcctccct ttggtcatcg
     1921 tccagccggg agtcaactat ggtccgggag acacgagcga gatccggccg ttgattgtgc
     1981 gatacctgca gcgcaagctg cgagccctcc cgaaacgaac cgcgtattgc tgggcgcacg
     2041 tcgacgacac ggcacgtggc cacctcctcg cgatggagaa aggagcggtc gggcaggcgt
     2101 acatcatcgc ggggtggccc cacacgttga tcgatgcgtt cgatctggcc gagcggatca
     2161 ccgggattcc tgcgcctcgg tttcatgcgt cgcccggcct gatccgtgcg ctggctgcga
     2221 tatctcgctc ggagaggctt cgagttgcgg cgggtgtgac gtatcttggg agcaacgcaa
     2281 aggcccgccg cgagttggga ttcgcgccgc ggcccctcga ggaaggtctt cgcgaaacac
     2341 tccggcacga gatgcggttg ctcggaatcg attccgccgc gagctgatcg gtcctcgtga
     2401 ggaatccctc aaataaatga tgcgcgttgc cggcgcaatt ctctggagga aatgagatgc
     2461 cgtacaacga tggccagagc acgctgttct tcggaccctg gtaccggaag tctccgttct
     2521 tcgaggccac ccagcgcgcg ggcgcgaagg cgtacgacat ctacaaccac atgtacctcc
     2581 ccggcctcta caccgatccg ttcgaggaat actggcatct gatcaaccat gtgaccttgt
     2641 gggatgtgag cgtcgagcgc caggtcgaga ttagcggcaa ggacggtgcg aagttcgcgg
     2701 agctcatcac gccgcgggac ctgacgaaat gcgacgtcgg ccagggcaag tatgtggtca
     2761 tcaccgacga aaacggcggg attatcaacg accccgtact gattcgcctg gagaaaaacc
     2821 ggttctggtt gagtctggcg aattcggaca ccctgctgtg ggcgaaaggg gtcgccgtca
     2881 attccgggat ggacgtggac atttcggagc cagacgtttc gccgctccag gtccagggac
     2941 cggattcaaa gaacgtcttg aaggatctcg tcggtcccgc ggtcctcgac ctcggctact
     3001 actatttcat gagcaccaag atcgacggca ttccggtcgt cgtcacgcgg accggttgga
     3061 cggccgaggt cggctacgag gtgtatc
//
LOCUS       DATLMA010000058         2229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_789643, whole genome shotgun sequence.
ACCESSION   DATLMA010000058 DATLMA010000000
VERSION     DATLMA010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_789643"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1805
                     /gene="thsB"
                     /locus_tag="VNA10_00780"
     CDS             147..1805
                     /gene="thsB"
                     /locus_tag="VNA10_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013036810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HVG36242.1"
                     /translation="MMGGQQIIILKEGTEREKGKGAVFNNIAAARAVADAVKSTLGPK
                     GMDKMLVDSLGDVTITNDGVTILKEIEIEHPTAKMLVEVAKTQDDEVGDGTTSAVILA
                     GELLKEAESLIEQEVHPTLIVNGYRMAAAEAVKLLRGLAFDVKRNDKDTLRSIARTAM
                     SGRSVGANADFLADIAVDAVQAIVEEVAGETRADVDNILVQKKHGGNLTDTTLIDGIV
                     LDKERVHPRMAKFVRDAKIALINRALEVKKTEVNEEIRIRDPSKLQMFLDEEEKTLRT
                     MVEKIKASGANVVLAQKGIDDVAQHFLAKEGIYAVRRVKESDMKKLAKATGARSVTNL
                     DDLTPKELGRADLVEERKVGTDDMTFITGCKKARAVSILIRGGTEHVVDEVERILHDA
                     LRVVSAAIEDGKAIPGGGSAEIELSLALKSYAASVGGREQLAIEAFAGALEVIPRALG
                     ENAGLDPIDVLIKLRAAHGKKGGKAMGVDVTSGEPLDMLKANVVEPLRVKVQEIDSAA
                     EVANMILRIDDVIASKKSPPPPPGAGEHGHGGMGGMGGMPGMGM"
     gene            complement(1811..>2229)
                     /locus_tag="VNA10_00785"
     CDS             complement(1811..>2229)
                     /locus_tag="VNA10_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36243.1"
                     /translation="DAANGGVALLAIAVFLLVFAVLVFLPRLARRGAASFSVYSRRSV
                     DEAVKAVREAIEASGKTARVDVVKSRSDHPPRIVTADGIPSRFRIEVTRHPAGAEGGL
                     EWTEIVESSASRDGEEAQALRKQVTERLAGRAPPDG"
BASE COUNT          477 a          692 c          743 g          317 t
ORIGIN      
        1 cgaggtctgg agcgcgatgc gcttccgacc ggggcagtga gtgaggagaa tcgtcatgat
       61 agaaaatccg gcggcacgga atctgacgcg cccaacgagg acaacactca tatagaagtc
      121 ctatcatagg accgacggga aatctcatga tgggcggtca gcagattatc atcttgaagg
      181 aagggacgga gcgcgagaag ggaaagggcg cggtgttcaa caacatcgcc gcggctcgcg
      241 cggtggccga cgcggtcaag tcgacccttg gaccgaaagg catggacaag atgcttgtcg
      301 actctctagg cgatgtgacg atcacgaacg atggggttac gattctgaag gaaatcgaga
      361 tcgaacaccc gaccgccaag atgctggtcg aggttgcaaa gacccaggac gacgaggtcg
      421 gcgacggcac cacaagcgcc gttattttgg ccggggaact cctcaaggag gcggagagcc
      481 tcatcgagca ggaagtccac ccgactctca tcgtgaacgg ctaccggatg gccgccgcgg
      541 aggccgtcaa actccttcga gggctcgcct ttgacgtgaa gcgcaacgac aaagacacgc
      601 tccggtcgat cgcgcgaacc gcgatgtccg gtcgaagcgt cggggcgaat gcggacttcc
      661 tagcagacat cgccgtcgac gcagtccaag cgatcgtcga ggaagtcgcg ggagagaccc
      721 gtgcggacgt cgacaacatc ctggtgcaga agaaacacgg cggcaacctc acggacacga
      781 ccctcatcga cggcatcgtc ctcgacaagg agcgcgtcca cccgcgcatg gcgaagttcg
      841 tccgcgacgc gaaaatcgcg ctgatcaacc gcgccctcga agtcaagaag accgaggtga
      901 acgaggagat ccgcatccgc gatccgtcga agctccagat gttcctcgat gaagaggaga
      961 agacccttcg aacgatggtc gagaagatca aagcctccgg cgcgaacgtc gtcctggctc
     1021 agaaggggat cgatgatgtc gcccagcact tcctggccaa ggaaggcatc tacgcggtcc
     1081 gccgcgtgaa ggagagcgac atgaagaagc tcgcgaaggc gaccggcgca cggagcgtca
     1141 cgaacctcga cgacctgacg ccgaaggaac tgggccgcgc agacctcgtc gaagagcgaa
     1201 aggtcggaac ggatgacatg acgttcatca cgggctgcaa gaaggcccgg gcggtctcga
     1261 tcctcatccg aggcggcacc gagcacgtcg tcgacgaggt cgagcgaatc ctgcacgatg
     1321 cactccgcgt cgtctccgcc gcgatcgagg acggcaaggc aatccccggt ggcggatcgg
     1381 cggagatcga gctgtccctc gccctcaaga gctacgccgc ctccgtcggc gggagagagc
     1441 agctcgcgat cgaggcgttc gcgggcgcac tcgaagtcat cccgcgagcc ctcggcgaga
     1501 acgcgggcct tgacccgatc gatgtcctga tcaaacttcg cgccgcccac gggaagaaag
     1561 gcggaaaggc gatgggcgtc gacgtcacga gtggtgagcc gctcgacatg ctgaaggcca
     1621 acgtcgtgga gccgctgcgc gtgaaggtcc aggagatcga ctcggccgcg gaggtcgcga
     1681 acatgatcct ccgaatcgac gacgtcatcg cctcgaagaa gtcgcctccc ccgccgccgg
     1741 gagccggtga acacggccac ggtggcatgg gcggaatggg tggcatgccc ggcatgggga
     1801 tgtaggatcc tcatccgtcg ggcggcgccc tgcccgcgag acgctccgtg acctgctttc
     1861 gaagcgcctg agcctcctcg ccgtcccggg atgccgacga ctcgacgatc tcggtccatt
     1921 cgagaccgcc ttccgcgccc gccgggtgtc gggtgacctc gatccggaag cggctcggga
     1981 ttccgtccgc ggtgacgatc cggggcgggt ggtcggaccg agacttgacg acgtccaccc
     2041 gggccgtctt cccggacgcc tcgatcgcct ctcgcacggc cttcacggcc tcatcgaccg
     2101 atcggcggga gtagacgctg aagctcgcgg ctccgcggcg cgccaggcgg gggaggaaga
     2161 cgagaacggc gaagacgagg aggaacaccg cgatcgctag caacgccacg cccccgttcg
     2221 cggcgtcgc
//
LOCUS       DATLMA010000059         1516 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_186387, whole genome shotgun sequence.
ACCESSION   DATLMA010000059 DATLMA010000000
VERSION     DATLMA010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186387"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..835)
                     /locus_tag="VNA10_00790"
     CDS             complement(<1..835)
                     /locus_tag="VNA10_00790"
                     /inference="COORDINATES: protein motif:HMM:NF018332.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG36244.1"
                     /translation="MEPSGPIPERGLAAAETSHSRRTVTLILAGLLAGLLLAFMDVTI
                     VSTAGPTIISELGGLSLYAWVFSAFLIVQVVTIPIFGKLSDLYGRKRLFLLGVVVFMA
                     GSALSGASQSIQELILFRAVQGLGFGAFVPTTIAIAGDLFPPDRRGRVQGLLFSVNGV
                     AFAIAPALGSFLTEAISWRWIFYINLPVGVVSLIVILSAFKESRAKRASAFSDWLGSA
                     GLAGFLGLLVFGLFLGGATIAWESWAEVAIFAGSAVLFVGFVLAERRAREPVLPPRLF
                     RI"
     gene            1041..>1516
                     /locus_tag="VNA10_00795"
     CDS             1041..>1516
                     /locus_tag="VNA10_00795"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HVG36245.1"
                     /translation="MPSVASDRPTALVTGANRGLGLETAVQLREKGFRIMLTSRDEDK
                     GIAVARKLDPEGHDVVYYQLDITDRGSITALAKDFPGLASRLDVLVNNAGIGSWGADR
                     RASARTIATNYFGSRDVTDALLPFVPNGGRIVMVSSGLGELSTMGRDLRPRFADPSL"
BASE COUNT          309 a          511 c          464 g          232 t
ORIGIN      
        1 gaatccgaaa caagcggggt ggcagcaccg gttcgcgggc ccgtcgttcc gcgagcacga
       61 agcccacgaa caggaccgcg cttcccgcga aaatcgcgac ttccgcccat gactcccacg
      121 cgatcgtggc ccctccgaga aacaatccga acacgagtaa gccgaggaac ccggccaggc
      181 ccgccgaccc gagccaatcg ctgaacgcgc tcgcgcgctt ggcgcgcgac tccttgaatg
      241 cggatagaat cacgatcagg gacacgacgc caacgggcag gttgatgtag aagatccatc
      301 gccagctgat cgcctccgtg aggaaggagc ccagcgccgg agcgatcgca aaggcgacac
      361 cgttcacgga gaagaggagt ccctgaaccc tccccctgcg gtccggcggg aaaaggtcgc
      421 ccgcgatggc gatcgtcgtt ggcacgaacg cgccgaagcc gaggccctgc accgcccgga
      481 agaggatcaa ttcctggatg ctttgggaag cgccggacag cgccgagccg gccatgaaca
      541 ccacgacgcc gaggagaaac agccgcttcc ttccatagag gtccgacagc ttgccgaaga
      601 ttggaatcgt cacgacctgg acgatgagaa aggcgctgaa gacccaggca tacagactca
      661 gccctccgag ctcggagatg atcgtcggac ccgcggtcga cacgattgtg acgtccatga
      721 aggccagcag gagcccggct agtagacccg cgaggatgag ggtcacggtc ctccgagagt
      781 gcgacgtctc ggccgcggcg agacctcgtt cggggattgg cccggatggt tccattcgct
      841 tcctcccttc gacatcgatc atcgacgttt ccacctcctc gttctcattg cgccagcctc
      901 tcggcctcgc ccatggcaat caaatggccc ggagcgacct gacgcacgag cgtctcccac
      961 aagggagggc gttacttacc cgtttcgagg agggttgcca cccacaacga gaaaagcgac
     1021 cgacctctgt tgagcgggtc atgccatccg tcgcatcgga ccgacccacg gcgctcgtca
     1081 ccggcgcaaa tcgtgggttg gggctcgaga cggccgtcca gctgcgagag aaaggattcc
     1141 gcatcatgtt gacgagtcgc gatgaggaca aaggaatcgc ggtcgctcgg aagctcgacc
     1201 ctgaaggcca cgatgtggtc tattaccagc tcgacatcac ggaccgcggg agcatcacgg
     1261 ccctcgcgaa ggacttcccc ggtcttgcgt cccgcctcga cgtcctcgtg aacaacgccg
     1321 ggatcggctc ctggggagcc gatcgacgcg cgtcagcccg gacgatcgcg acgaactact
     1381 tcggctcgcg agacgtcacc gacgcgctcc tcccgttcgt cccgaacggc ggccgcatcg
     1441 tcatggtctc gagcggtctc ggggaactgt cgaccatggg ccgcgatctc cgcccgcgct
     1501 tcgccgatcc atccct
//
LOCUS       DATLMA010000060         4253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_6682,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000060 DATLMA010000000
VERSION     DATLMA010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4253
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6682"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VNA10_00800"
     CDS             <1..1272
                     /locus_tag="VNA10_00800"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36246.1"
                     /translation="PTARRRSFHSLEAVYFMDGSEMRDRLEGMYHLIEAGDMKAFGEY
                     LAETSGALLDSVPASELMTVLRKIDRTSLDPLSACILPELMGDTLRALGDLQPALLEY
                     RHAVQQSEANRRSDRVPRLLRKIASIERCRKENAKALGHLVEAQARLESHPDPAERGE
                     VLRELALLEGAQGTLGEAVVHMNQAVDLATEVSEPGALARCLTALGSIESIRGNFERG
                     LDVKLEALRIAERGGNLTEIARACISAGMSLHELRRYEESLKYYDRALQIGRLVGNIR
                     LQGYALMDRAAAMMDIGQFEEAGPVIEEAKRLISVLEEKDSLFVIDISDGQREMGLGR
                     WTRATRLWDRGLRGLKELGGVSDYARALTYVGRFYLEKGETGPGLRFLEEARGIAKTV
                     GLESLLSEIQALETRREAKDLNTPPARLADR"
     gene            1423..2478
                     /locus_tag="VNA10_00805"
     CDS             1423..2478
                     /locus_tag="VNA10_00805"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HVG36247.1"
                     /translation="MVAFPHPRRRHPFHMHDMIIGQPAFVAEALRRTAAADMSSFLRT
                     PRRLVFTGCGTSFHAATYGARVFQEVLPFVPVLAIHAYDLAYGSSVPANATVLGVSHS
                     GSTPTTNRALRRVRGRGSRTIAMCGLPDSPMERVADQTLVIGSTHDHSWANTMSYTTQ
                     LTALAAVASRLKSHVAPSIESSLRGISRSLEKTLTCESRVRRLATRIARGARITFLGS
                     DLDEITALEAALKVRETCSLPASGYHAEQFLHGPYLSIDDRESIIMLRSRDDGPRSLA
                     IVRALKASGAPVATIGEAPRAQIRLPATSRILRPILSIVPMQFLAYYAALARRANPDI
                     MRTDIPRLRAGVEALFH"
     gene            complement(2423..2830)
                     /locus_tag="VNA10_00810"
     CDS             complement(2423..2830)
                     /locus_tag="VNA10_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HVG36248.1"
                     /translation="MAEDLLLYDSDGQSLLDDHALRILIALHQESLTAQEIATRYRVP
                     IAACYRRIRRLASLALISEAGFVTEGRRRPARLYKSEVDRFQITYGNGKMHLQLLLRN
                     GTEAKTVVGVPPDVGVSEREPPHPHEVGEYPSA"
     gene            complement(2972..3400)
                     /locus_tag="VNA10_00815"
     CDS             complement(2972..3400)
                     /locus_tag="VNA10_00815"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HVG36249.1"
                     /translation="MPEGTATFEVRAPVDRVWAFVSDMRKIGGCVPGVQSVEVLDETR
                     ARWNLKVKIGPLSQDIQVLTETLEQVPLKHGKFRGQAENMDITGTIDLTPDGKSTKVT
                     YTMAVQAKGPLARIMDNFLRTRLKAQSEEFAANVKKSIEG"
     gene            complement(3572..3760)
                     /locus_tag="VNA10_00820"
     CDS             complement(3572..3760)
                     /locus_tag="VNA10_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008604422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36250.1"
                     /translation="MPYTYQGWTLYSRDVKLKKGPKVTIYFFSKRKPKSGKPMDEMPK
                     NRKVGVNKRTGLPFLRKG"
     gene            4027..4173
                     /locus_tag="VNA10_00825"
     CDS             4027..4173
                     /locus_tag="VNA10_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36251.1"
                     /translation="MKAKLHTLECDEEDLIELPDAWIPVRLEHNSYATPSRKAYTLYY
                     LVRA"
BASE COUNT          739 a         1363 c         1343 g          808 t
ORIGIN      
        1 ccaacggcgc ggcgacgatc gttccactcc ctcgaggcgg tatacttcat ggacggctcc
       61 gagatgcggg accgcctcga agggatgtac catctgatcg aagccggcga catgaaggcc
      121 ttcggcgaat acctggccga aacgagcggc gccctcttgg actccgtgcc ggcctcggag
      181 ctcatgaccg tgctgcgcaa gatcgaccgc acgagcctcg atccgctctc cgcgtgcatc
      241 ctcccggagc tcatgggcga cacgctgcgg gcgctcggag atctccagcc cgccctgctg
      301 gaataccgcc acgcggtcca acagtccgag gcgaatcgtc ggagtgaccg ggtcccgcgg
      361 ctccttcgca agatcgcgtc catcgagcga tgccgcaagg agaacgcgaa ggccctcggc
      421 catctcgtcg aagcacaggc ccgcctggag tcgcaccccg acccggcgga gcgcggcgaa
      481 gtcttgcggg agctcgccct cctggagggc gcccaaggca ccctcggcga ggcggtcgtc
      541 cacatgaacc aggcggtcga cctggcgacg gaagtctccg agcccggggc cctcgcccgg
      601 tgcctgaccg cactcgggag catcgaaagc atccggggga acttcgaacg gggcttggac
      661 gtcaagctcg aggcgctacg gatcgccgag cggggcggca acctgacgga gatcgcgcgg
      721 gcgtgcatct ccgcgggcat gtccctccac gagctccggc ggtatgagga gagcctcaag
      781 tattacgacc gggcgctgca gatcggtcgg ctcgtcggga acatccgcct ccagggatac
      841 gcgctcatgg atcgagcggc cgcgatgatg gacatcggac agttcgaaga ggccggtcca
      901 gtgatcgagg aagccaagcg gctcatctcc gtcctcgagg aaaaggactc tctttttgtg
      961 atcgatatct cggacggcca acgagagatg ggactgggcc gatggacccg cgcgacccgc
     1021 ttgtgggatc gcggtctccg cgggctgaag gaattgggcg gcgtgtccga ctatgcccgc
     1081 gcgctcacat acgtcggccg gttctatctc gagaaagggg aaacggggcc cggattgcgg
     1141 tttctcgagg aagcgcgggg gatcgccaag acggttggcc ttgaatcctt gctctccgag
     1201 attcaggcgt tggagacgcg gcgcgaggcc aaggatctca atacccctcc ggcgcggttg
     1261 gctgaccgtt agctcggatc cttgggcggc ccgtccattc gttcacctct cggcgggcga
     1321 gcggtccgct atcggattta agaatgacgg gacttgttcc gttttggcct ctgcggacat
     1381 gccatcccgt cgaagttaag gccgccaccg cgatgcgcgg acatggtcgc ttttccccat
     1441 ccgcggcgcc gtcacccgtt ccacatgcac gacatgatca tcggccaacc ggcgttcgtc
     1501 gcggaggcac tgcggcggac cgctgcggcc gatatgagtt cgttcctccg gacgccccgc
     1561 cgtctcgtct tcacggggtg tggcacgtcg ttccatgccg ccacctacgg ggctcgggtg
     1621 ttccaggagg tcctaccgtt cgttccggtg ctcgcaatcc atgcgtacga tctcgcctac
     1681 ggctcatccg ttcccgcgaa tgcaaccgtg ctcggtgtga gtcacagcgg ctcgacacca
     1741 acgacgaacc gggcccttcg tcgggttcgg ggccggggtt ctcgcacgat cgcgatgtgt
     1801 ggactcccgg attctccgat ggagcgcgtg gccgaccaga cgctcgtcat cggctcgacc
     1861 catgaccatt cctgggcgaa cacgatgagc tacacgacgc agctcacggc gctcgccgcc
     1921 gtcgcgtcgc ggttgaaatc gcacgtcgcg ccttcgattg aatcgtcgct ccgaggcatc
     1981 tcgcggtctc tcgagaagac attgacgtgc gaatcgcgcg tccggcgact cgcgacccga
     2041 atcgcgcgcg gtgcgcgcat cacattcctc ggtagcgacc tcgatgagat cacggccctc
     2101 gaggctgccc tcaaggttcg cgagacgtgt agtctgccgg cgagcggcta tcacgccgag
     2161 cagttcctcc atggcccgta tctttcgatc gatgatcggg aatcgatcat catgttgcgc
     2221 tctcgggatg acgggccgcg cagcctcgcg attgtccgtg ctctgaaggc ttctggggcg
     2281 cccgtcgcga cgatcggcga agccccgcgc gcgcagattc gcctgcccgc gacgtctcgc
     2341 attcttcgac cgatcctctc gatcgtgccg atgcagttcc tcgcgtacta cgcggccctc
     2401 gcccggcggg cgaacccgga catcatgcgg acggatattc cccgacttcg tgcgggtgtg
     2461 gaggctctct ttcactgacg ccgacgtccg gcgggacgcc gacgaccgtc ttcgcctccg
     2521 tcccgttccg caggagcagc tggagatgca tcttcccgtt gccgtacgtg atctggaagc
     2581 ggtcgacttc tgacttgtag aggcgtgcgg gtctccggcg gccttccgtg acgaatccgg
     2641 cttcggaaat cagagcgagg gaagcgaggc gacggatccg gcggtagcag gcagcgatcg
     2701 gcacgcggta acgagtcgcg atctcctgcg ccgtaaggct ctcttgatgg agcgcgatga
     2761 ggatccggag cgcatgatcg tcgaggagcg actgcccgtc cgagtcgtac agcaagaggt
     2821 cttcggccat gagtggcggc cgaggagccg gagaacctcc gttgggcggt cccaccgatg
     2881 ccacgcggcc gattcgcgtt ctcccttcta aaagccctag cctcccgtta tcacggttga
     2941 gcgagaggca ggcacgcgcc tccgagttgc gtcagccttc gatcgacttc ttgacattcg
     3001 ctgcgaactc ttccgactgg gctttcagcc gagtccgtaa gaaattgtcc atgatccgag
     3061 cgagcggtcc tttcgcctgg acggccatcg tataggtgac cttcgtcgat ttcccgtcgg
     3121 gtgtcagatc gatagtcccc gtgatgtcca tgttctcggc ctgaccgcgg aacttcccgt
     3181 gtttcagcgg gacctgctcg agcgtttccg tgaggacctg aatgtcctgg gacagcgggc
     3241 cgatcttcac cttcagattc caacgggcgc gtgtctcgtc caggacttca accgactgca
     3301 ctccggggac acatccgccg atcttccgca tgtcgctgac gaacgcccac acccgatcga
     3361 ccggcgctcg gacctcgaat gtcgcagtgc cttcgggcat accgagtcgg gcaatgcgcg
     3421 agtcgtaaag aactttgcag cagcgccacc gcgtgaacgg atttgcgggt gtgggccacc
     3481 gccatcgcag cggatcgaaa tccaatcaat aagagaaagg gccgaggtcc tcccccattt
     3541 tgcctcggcg ggtggggtcg cgaggttgga ctcagccctt gcggagaaac ggaaggcccg
     3601 tgcgcttgtt gacgccgacc tttcggttct tcggcatttc gtccatcggt ttgccgctct
     3661 tcggtttccg cttgctgaag aagtagatcg tcactttcgg tcccttcttc agtttcacgt
     3721 ctcgcgagta cagcgtccat ccctggtacg tgtacggcat tgtttgacct cgggcctcca
     3781 tgcagctagg gtataaaaaa gcgtttccct ccggagaatt gtcagacagg acggcgaccg
     3841 tagctattat gtggctgtaa catagcgcat ctgaggccca tggaggcaac gcggcccgaa
     3901 aggggcacga tgtctccgac gggcgggatg gcggcgaaaa ggaggtccgg agcgttcacg
     3961 ataatcacgt gcgagaacag gtccgaaaga cctttcaaac cccccataaa cggcgatgtg
     4021 gtcttcatga aagcgaagct ccacaccctc gagtgcgacg aggaagatct catcgagctg
     4081 cctgacgcct ggatccccgt gcgcctggag cacaacagct acgccacccc gagccgcaag
     4141 gcctacacct tgtactacct ggtgcgcgcg tgatgtgccg cgcgagttga atagggccac
     4201 cgcgtttccg ttcgcgtgag tgaaagactc tcggagctgg cggggcatct cgg
//
LOCUS       DATLMA010000061         2457 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_729692, whole genome shotgun sequence.
ACCESSION   DATLMA010000061 DATLMA010000000
VERSION     DATLMA010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729692"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1365
                     /locus_tag="VNA10_00830"
     CDS             <1..1365
                     /locus_tag="VNA10_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36252.1"
                     /translation="QSRTLKPWLGFAIVSTMIITFFLQWQALGGWLVAVLGLSPMFLG
                     LGLTMGNQMFIDWGIWFATPMGAMITTMVTSTIAAAVLIKSFRWFVKVQWVMWYGFLL
                     SFFLMVVMFFLTPTATFTARFDRATQVIVGSNGLTYQQLLSGYFTPTTEAAWLTTLLV
                     APVALTSLGWVGYAQEQAGEIQGAQSLRNQMFINLGGGLVSMVMMAVLAFAMIQTVGQ
                     NWLSGAAAASFVPGLPMISPWFSNLAMMLTDNPIILFLMIVGVLLNALQVVFNVIIGW
                     TRVAVAMSIDGALPKVVSHVSPRTHTPVYAHVIFLILGGYLYAFIYNMVPGYLTYTLA
                     VTAVATVMYIGTAIGGAVFPRTRREVYRTSPIAKYKIGPIPLITICGAIAAAFSAAML
                     YLYIVEPFLGIANLSAGFDGVKSLLIMLAIFVGWSVYYFVRRAYLKSVGINLELAYKE
                     IPPI"
     gene            complement(1398..2381)
                     /locus_tag="VNA10_00835"
     CDS             complement(1398..2381)
                     /locus_tag="VNA10_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HVG36253.1"
                     /translation="MPTDRGKRKYKRLFLAADLHGSEVVFRKFLAAATFYEADALLIG
                     GDLTAKSITPIVQQDSGRFQTRLAGAVRDNLSEAELAPIEKAIADSGPYPVRMTEDDY
                     ARFRANPDKVEALFTDRMIDQIRRWTEMAEKHLAPLDIPLYWIGGNDDKVEALLQAES
                     TPHVHYIDEKVARFDEDHEILGFGWTNPSPWHTPRELSEDGLKRRLDPLLSRVQDPAR
                     CIYLMHAPPYETGLDIAPKLDTTTDPPRPVVRGGQQVLIPVGSTTFRSAILETQPVLG
                     LHGHIHETKNAAKLKRTVCVDPGSEYSAGTLRGAIINLERDRVLSYQFTTG"
BASE COUNT          427 a          753 c          729 g          548 t
ORIGIN      
        1 cagagccgga cgttaaagcc gtggctcggg ttcgccatcg tctccacaat gatcatcacg
       61 ttcttcctcc aatggcaggc gctcggcggc tggctcgtcg cggtcctcgg cctttcgccg
      121 atgttcctcg gactcggcct cacgatgggg aatcagatgt tcatcgactg gggcatttgg
      181 tttgccacgc cgatgggtgc gatgattacc acgatggtaa cctccacgat tgccgccgcc
      241 gtactgatca agagcttccg ttggttcgta aaggttcagt gggtgatgtg gtatggattc
      301 ctcctgagct tcttcctcat ggtcgtgatg ttcttcctca ccccgacggc cacgttcacc
      361 gctcgctttg accgggccac gcaggtgatt gtgggctcga acggtctcac ttaccaacag
      421 ctcctttcag gctacttcac accgacgacc gaagccgcct ggctaacgac cctccttgtg
      481 gctccggtgg ctctcacgag cctcgggtgg gtcggatatg cgcaagaaca ggccggcgaa
      541 atccaggggg cccagagcct ccggaatcag atgttcatca acctcggcgg aggactggtc
      601 agcatggtca tgatggctgt cctcgcgttc gccatgattc agacggtcgg ccaaaactgg
      661 ctatcgggcg ccgccgcggc ttcgttcgtt cccggactgc caatgatctc accgtggttc
      721 agcaacctcg ccatgatgct caccgacaat ccgatcatcc tgttcctcat gatcgtcggt
      781 gtcctgctca acgcattgca agtggtgttc aacgttatca tcggatggac ccgagtcgcc
      841 gtcgccatgt cgatcgacgg ggccttgcct aaggtcgtga gccacgtgag tcctcgcact
      901 cacacgccgg tctacgctca cgtcatcttc ttgatcctcg gcggctactt gtacgcgttc
      961 atctacaaca tggtgccggg ctacctcacc tatacccttg cggtgaccgc cgtcgcgacc
     1021 gtcatgtaca tcgggaccgc aattgggggg gcagtcttcc cgaggacccg gcgcgaagtg
     1081 tatcgcacgt ccccgatcgc gaaatacaag atcggtccaa tcccgctcat cacgatttgc
     1141 ggagccatcg ccgcagcgtt cagcgcggcg atgctctact tgtatatcgt cgaaccgttc
     1201 ctcggcatcg cgaatctgtc ggccgggttt gacggagtga aatcgctcct catcatgctc
     1261 gcgatcttcg tcggctggtc cgtctactac ttcgtgcggc gggcatactt gaagagcgtc
     1321 ggaattaacc tcgagctcgc gtacaaggaa atcccgccaa tctaggacgc ccgcgggatc
     1381 cgctgaggcg tcagcaatca gcccgtcgtg aactgatagc tcagaacacg gtcccgctcg
     1441 aggttgatga tcgcaccgcg gagcgtccct gcgctgtatt cagaacccgg atccacacag
     1501 acggtccgtt tgagtttcgc ggcgttcttc gtctcgtgga tatgcccatg gagcccgagg
     1561 accggttgag tttcgaggat cgcggaacga aaagtcgtgc tgccaaccgg aatcaggacc
     1621 tgttgtcctc cgcgcacaac cgggcgtggc gggtccgtgg tcgtgtcaag cttcggcgcg
     1681 atgtccaacc cggtctcata gggaggtgcg tgcatcaggt atatgcagcg agcgggatcc
     1741 tgcacgcggc tcagaagtgg atcgagacgt ctcttgaggc catcctccga cagctccctc
     1801 ggcgtgtgcc acggcgaagg attcgtccat ccaaatccaa ggatctcatg gtcttcatcg
     1861 aaccgggcca ccttctcgtc gatgtagtgg acgtgaggcg tggattcggc ttgcaagagg
     1921 gcctcgactt tgtcgtcgtt gcctccgatc cagtacagtg ggatgtcgag cggggctagg
     1981 tgcttctcgg ccatctcggt ccatcgccga atttggtcga tcatccggtc cgtgaagagg
     2041 gcctcgactt tgtccggatt cgcccggaag cgggcgtagt cgtcctccgt catccggacc
     2101 ggatacgggc cggagtccgc gattgctttc tcgatgggcg ccaactcggc ttccgacagg
     2161 ttgtcgcgga ccgctccggc gagccgcgtt tgaaaccggc cactgtcctg ctggacaatc
     2221 ggggtgatgg acttcgcagt gaggtcgcct ccaatgagga gcgcgtcggc ttcgtagaac
     2281 gtcgcggctg cgaggaactt gcggaagacg acttccgagc cgtggagatc ggcggcgagg
     2341 aagagacgct tgtactttcg tttcccgcgg tcggtcggca tgcgtcttac cgcagactct
     2401 ggcccgctcc ttagcctttt gggagtttgg accgaccacc tccgtgacaa tctcgcg
//
LOCUS       DATLMA010000062         1038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_368036, whole genome shotgun sequence.
ACCESSION   DATLMA010000062 DATLMA010000000
VERSION     DATLMA010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368036"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..>1038
                     /locus_tag="VNA10_00840"
     CDS             231..>1038
                     /locus_tag="VNA10_00840"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012930284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HVG36254.1"
                     /translation="MRVFESILDTIGNTPLVKLPKIMAGVPCLALAKLEMMNPGGSVK
                     DRIGEKMIEDAEAKGLLKPGGTIIEPTSGNTGLGLAMVAAIKGYRTVFTMPDKMSREK
                     IDLLKALGARVVVTPTAVPPDHPDSYYRVAERIHRDTPNSILPNQYANQANPRAHYET
                     TGPEIWRDTDGTITHFVCGMGTGGTISGVGKFLKEKNPKIQVIGVDPLGSILKDFFYK
                     KEPMKAHTYKIEGIGEDFVPESTWFDTIDEIVKVGDKEAYLMTRRLAREEG"
BASE COUNT          227 a          310 c          331 g          170 t
ORIGIN      
        1 tgacagagcg gctaatgtga ccgactgcag atcggtttcc agagggttcg actccctccc
       61 ccggcatctt cgtgtcccac ggcctccggc ctttcgactc gcagcgagac cgatttcgta
      121 actggtgcga accgaacgcg gtcgggagga cctcgaaggt gagggacccg cgcacgttct
      181 tatagcgacc atccttttca tcgaatgtcg gtgacggggt cggcctagca atgcgggtat
      241 tcgagagcat cctcgacacg atcgggaaca cgcccttggt caaactgccc aagatcatgg
      301 cgggtgtccc ttgcctcgcg cttgccaagc tcgagatgat gaatcccggc gggagcgtca
      361 aagaccgaat cggggagaag atgatcgagg acgcggaggc gaaggggctg ttgaaacccg
      421 gaggaacgat catcgagccc acgagcggga acaccggcct gggcctcgcg atggtcgccg
      481 cgatcaaggg ctaccgcacg gtcttcacga tgccggacaa gatgagccgg gagaagatcg
      541 acctcctgaa ggccctcggg gcccgggtcg tcgtgacgcc cacggcggtt ccgcccgatc
      601 atccggattc ctactatcgg gtcgccgaac ggatccatcg ggacacgccg aactcgatcc
      661 tgcccaacca gtatgcgaac caggccaatc cccgagccca ctacgagacg acgggcccgg
      721 aaatctggag ggacaccgac gggacgatca cgcacttcgt ctgcgggatg ggcaccggtg
      781 gcacgatctc cggcgtgggc aagttcctca aggagaagaa tccgaagatt caggtcatcg
      841 gggtcgaccc gctcggatca atcttgaagg atttcttcta caagaaggaa cccatgaagg
      901 cccacaccta taagatcgaa ggaatcgggg aggacttcgt gccggagtcg acctggttcg
      961 acacgatcga cgagatcgtc aaggtgggcg acaaggaggc gtacctgatg acgcgccgcc
     1021 tcgcccggga ggaaggcg
//
LOCUS       DATLMA010000063         1305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_610137, whole genome shotgun sequence.
ACCESSION   DATLMA010000063 DATLMA010000000
VERSION     DATLMA010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_610137"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VNA10_00845"
     CDS             <1..229
                     /locus_tag="VNA10_00845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HVG36255.1"
                     /translation="IEFRVANASPVAVDYELNGKVYSLPPRSTRTHEECRVARLTMRL
                     PGERQSTTVQPADGDRYEVERLGPRYRLKKV"
     gene            complement(236..1228)
                     /locus_tag="VNA10_00850"
     CDS             complement(236..1228)
                     /locus_tag="VNA10_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009770384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyquinol 1,2-dioxygenase"
                     /protein_id="HVG36256.1"
                     /translation="MSSTTSAVPEIGSIEPNRHGYRTFTLGGFTFSRDEYFADVRWPK
                     GHHWLPVDAFLRALQRDIAWGFFYGIVNFDAVVGTVNHYGSVDLFAGRFNDHYRKAGL
                     DHTERFTTPLIQRVFEAMLEDWTNATFDPFASPQETGSAFGPKNGSNKEAITRHRVTA
                     RRMVGAPGDEPVRTDENGFPVNRHFRDVPQDKPEVLAEPGFEDEVVAFNLFAYLSRSD
                     VTWNPSIVSVCKASLYCPTTEEYILPVIHGNDRVEWFVQLSDEIQWEVEDRDTGAVRA
                     RVTMKAGDVAAMPADIRHRGFSPKRSMLLVWENATAELPQLYASGKMPPTPVTF"
BASE COUNT          217 a          421 c          430 g          237 t
ORIGIN      
        1 gatcgaattc cgcgtggcca atgcatcgcc ggtcgccgtc gactacgagc tcaacggcaa
       61 agtgtactcg ctgcctccgc gctcgacgcg cacgcacgag gaatgccgcg tcgcgaggtt
      121 gaccatgcgc ctgcctggcg agcggcagtc cacgacggtg cagcccgcgg acggcgatcg
      181 ctacgaggtc gagcgcctcg gaccgcgata ccggctgaag aaggtatgac cttcgctaga
      241 aggtcaccgg ggtgggcggc atcttgccgc tggcatagag ctgcggcagc tcggccgtcg
      301 cgttctccca cacgagcagc atcgagcgct tcggcgagaa cccgcgatgg cggatgtcgg
      361 cgggcatggc ggcgacgtca cccgccttca tcgtcacccg ggcacgcacc gcgcccgtat
      421 cacggtcctc gacctcccac tggatctcgt cgctcagctg gacgaaccat tccacgcggt
      481 cattgccgtg aatgacgggc aggatgtact cctccgtggt cggacagtag aggctcgcct
      541 tgcagacgga tacgatcgac gggttccagg tcacgtcgga gcgggacagg taggcaaaga
      601 ggttgaacgc gacgacctcg tcctcgaagc cgggttcggc taggacctcc ggcttgtcct
      661 ggggaacgtc acggaagtgt cggttcaccg ggaagccgtt ttcgtccgtg cgtaccggct
      721 cgtctccggg ggcccccacc attcgccgcg cggtcacccg gtgacgggtg atcgcctcct
      781 tgttgctgcc gttcttcggc ccgaacgcgc tccccgtctc ctgagggctg gcgaacgggt
      841 cgaaggtggc gttcgtccag tcctccagca tggcctcgaa gacgcgctgg atgagcggcg
      901 tggtgaatcg ctcggtgtga tcgagccccg ccttccggta gtgatcgttg aatcggccgg
      961 cgaagagatc caccgatccg tagtggttca cggttccgac gaccgcgtcg aaattcacga
     1021 tgccatagaa gaagccccac gcaatgtcac gctggagcgc gcgcaggaag gcgtcgacgg
     1081 gaagccagtg gtggcccttt ggccacctca cgtctgcgaa gtactcgtca cggctgaagg
     1141 tgaagccgcc gagcgtaaag gtccggtagc cgtgacggtt gggctcgatg gatccgatct
     1201 cggggacggc gctcgtcgtc gaactcatct tcttcctcct cgttcctcag accttcgggc
     1261 gcggggcaat ctggcagatc tccgcccagc gttcgatcgt gtccg
//
LOCUS       DATLMA010000064         1081 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_66280, whole genome shotgun sequence.
ACCESSION   DATLMA010000064 DATLMA010000000
VERSION     DATLMA010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66280"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /gene="bamA"
                     /locus_tag="VNA10_00855"
     CDS             complement(<1..1072)
                     /gene="bamA"
                     /locus_tag="VNA10_00855"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HVG36257.1"
                     /translation="MQSKPGSTFSPSQLSEDVRNVFALGFFDDVRTRIEDFEGGVKLT
                     FEVVERPFVRDVEFVGNRRISNDTLREKIDLKLGSVYNPVDVQRAREKLKDYYEEEGY
                     FEVQITPETETFPDGDVKVVFAIGEGRRITIDKIVIRGNKGLSDKKIKDAMQVQERQY
                     FILRGTLQRQKLDEDVERIISVYNDHGFVQARVESTDVAVDRDRAAVTITIQVMEGPQ
                     YKVGKVDIIGVTLVPLTEVRRQIKFKTGDVFSRSKVREALRSIGDLYSTIGHASAEVN
                     PRTEQIPSPPTMDVVFEIVEGPEVYVERINIVGNVRSQDKILRREIPLEEGELFTLQK
                     MQRARQRLINLGFFETVNVTTAP"
BASE COUNT          170 a          343 c          343 g          225 t
ORIGIN      
        1 cgggcgcggt ggtgacgttg acagtctcga agaagccgag gttgatcaac cgctggcgcg
       61 cccgctgcat tttctgcagg gtgaagagct cgccctcctc gagcgggatc tcgcggcgca
      121 ggatcttgtc ctgactccgg acgttgccca cgatgttgat ccgctcgacg tagacttccg
      181 gcccctcgac gatctcgaag accacgtcca tcgtgggcgg gctcgggatc tgctccgtgc
      241 gcgggttcac ctcggcggac gcgtgaccga tcgtgctgta gaggtcgccg atggaacgga
      301 gagcttcgcg gaccttcgac cgggagaaca cgtcacccgt cttgaacttg atctggcgcc
      361 ggacttcggt gagcggcacc agcgtgaccc cgatgatgtc gaccttcccc accttgtact
      421 gcgggccctc catgacctgg atcgtgatgg tcacggccgc ccgatcgcgg tcgacggcga
      481 cgtcggtcga ctcgacccgc gcctgaacga agccgtggtc gttgtagacg gagatgatcc
      541 gctcgacgtc ctcgtcgagc ttttgccgct ggagcgtgcc ccgcaggatg aagtactggc
      601 gctcctgcac ttgcatcgcg tccttgatct tcttgtcgga gagccccttg ttgccgcgga
      661 tgacgatctt gtcgatggtg atccgccgac cttccccgat cgcgaagacg accttcacgt
      721 cgccgtcggg aaacgtctcg gtctcgggcg tgatctggac ctcgaagtag ccttcctcct
      781 cgtagtaatc cttgagcttt tctcgcgcgc gctggacatc gacggggttg tagacgctgc
      841 caagtttgag gtcgatcttc tcgcggagcg tgtcgttgct gatccggcgg ttcccaacga
      901 actcgacgtc ccgcacgaag ggccgctcca cgacctcgaa ggtcagcttc acgccgccct
      961 cgaagtcctc gatgcgggtc cgcacgtcgt cgaagaagcc gagcgcgaat acgttacgga
     1021 cgtcctcgga gagctgcgac ggactgaagg tgctcccggg tttgctttgg atgcggccga
     1081 g
//
LOCUS       DATLMA010000065         1931 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_127269, whole genome shotgun sequence.
ACCESSION   DATLMA010000065 DATLMA010000000
VERSION     DATLMA010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1931
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127269"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VNA10_00860"
     CDS             complement(<1..823)
                     /locus_tag="VNA10_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006903459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HVG36258.1"
                     /translation="MNSSWRRSFGSESRFRRGEGTAEEGLLRIIDADGTYDSKLEPRV
                     APDLLKRAYRHLVLVRTLDNRMLSLQRQGRIGFYVPSTGEEAAQVGSAMALEKRDWVF
                     PAYREPGAALWRGFPVATLIAQAYGNAKDPQQGRQMPNHYGARDINYVPVSSPVGTQI
                     PQAVGAAWAAKIRKEDIVTLTYFGDGATSEGDFHAGMNFAGVFKTPTIFFCKNNQWAI
                     SVPVSRQTASKTLAQKALAYGFDGVRVDGNDLLAVYAVTKAAADKARSGGGPTMIE"
     gene            complement(768..1664)
                     /gene="lipA"
                     /locus_tag="VNA10_00865"
     CDS             complement(768..1664)
                     /gene="lipA"
                     /locus_tag="VNA10_00865"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013440424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HVG36259.1"
                     /translation="MLAERKPEWLRVRPPSGEKYAHLKTLFRSLDLHTVCEEAHCPNV
                     WECWGGGTATIMLMGDTCTRGCRFCAVTSGNPHGVLDLDEPKKVAMALAEMDLTYVVL
                     TSVDRDDLEDGGAGHFARTVREIKARRPDMLVEALIPDFQGDLEAVRVVVDSGVDVLD
                     HNIETVERLQGTVRDRRAGYAQSLKVLRGAKEMRPDLFTKSSIMLGLGETRAEVLAAM
                     RDLRANGVDIVTVGQYLRPSNWHLAVQEYVPPEVFEELRVAGESMGFAYVAAGPLVRS
                     SYRAGEFFLEKVVRERKQVPAG"
     gene            complement(1728..>1931)
                     /locus_tag="VNA10_00870"
     CDS             complement(1728..>1931)
                     /locus_tag="VNA10_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36260.1"
                     /translation="VCRTCDTIPCLYVCPSKVYRLEKNELVYNTEGCIELGACAIVCK
                     HIGKDAIHWSYPRGSYGVEFRFG"
BASE COUNT          320 a          650 c          614 g          347 t
ORIGIN      
        1 cctcgatcat cgtcggtccg ccaccgctgc gggctttgtc cgcggccgcc ttcgtaaccg
       61 cgtagaccgc gagcagatcg ttcccgtcga cgcggacgcc gtcgaagccg tacgccaagg
      121 ccttttgagc aagggtcttc gaggcggtct ggcgggagac cggaacggag atggcccact
      181 ggttgttctt gcagaagaag atcgtcgggg tcttgaacac gcccgcgaag ttcatcccgg
      241 cgtggaagtc gccctcgctc gtggcgccgt cgccgaagta cgtgagcgtg acgatgtcct
      301 ccttgcggat cttcgcggcc cacgccgcgc cgaccgcctg cgggatctgc gtcccgaccg
      361 ggctggagac cggcacgtag ttgatgtcgc gggccccgta gtggttcggc atctggcggc
      421 cctgttgcgg gtccttcgcg ttgccgtacg cctgggcgat cagcgtcgcg acggggaagc
      481 cgcgccagag ggccgccccc ggctcccgat acgccgggaa cacccagtcc cgtttctcga
      541 gggccatcgc gctgcccacc tgggccgcct cctctccggt gcttggaaca tagaatccga
      601 tccgcccttg ccgctggagg gagagcatcc ggttgtccag tgtgcgaacg aggacgaggt
      661 ggcgatacgc ccgcttcagg aggtccggcg cgacccgcgg ctcgagcttc gaatcgtagg
      721 tgccgtcggc gtcgatgatc cggagaagcc cctcttccgc cgtgccctca ccccgccgga
      781 acctgctttc gctcccgaac gaccttctcc aagaagaatt caccggcgcg atacgacgac
      841 cgaacgagcg gtcccgcggc gacgtaggcg aagcccatcg attcgccggc gacgcgaagc
      901 tcctcgaaca cctccggggg cacgtattcc tggacggcga ggtgccagtt gctcgggcgc
      961 aggtactggc ccacggtcac gatgtccacc ccgttcgcac ggaggtctcg catcgccgcg
     1021 agcacttccg ctcgcgtctc gccgaggccg agcatgatcg aggacttcgt gaacagatcg
     1081 ggtcgcatct ccttcgcgcc tcgcaggacc ttcaggctct gcgcgtagcc cgcgcgtcgg
     1141 tcccggaccg tgccttgcaa ccgctcgacc gtctcgatgt tgtgatcgag gacgtcgacg
     1201 ccggaatcga cgacaacgcg gaccgcttcc aggtcgccct gaaaatcggg gatgagcgct
     1261 tcgacaagca tgtccgggcg ccgggctttg atctcgcgga ccgttctcgc gaagtgtccc
     1321 gcgccgccat cctcgaggtc gtcgcggtcc acggacgtca ggaccacgta ggtgaggtcc
     1381 atctcggcca aggccatggc gaccttcttc ggctcatcga ggtcgagcac gccatggggg
     1441 ttgccggacg tcacggcgca gaaacgacag cctcgagtgc atgtgtctcc catcaacatg
     1501 atcgtcgcgg tgccaccgcc ccagcactcc cagacgttcg ggcaatgggc ctcctcgcag
     1561 acggtgtgaa ggtccagcga ccggaacagg gtcttcaggt gggcgtactt ctcgccggag
     1621 ggtgggcgga ctcggagcca ctccggcttt cgctccgcga gcattgtgcg attgctaagg
     1681 tcgacctcgt ttaagagcct aacccacatc ggaatgcgcc gacacgatca tccaaaacgg
     1741 aactcgactc cgtaggagcc gcgagggtaa ctccagtgga tcgcgtcctt cccgatgtgc
     1801 ttgcacacga tggcgcacgc cccaagctcg atgcatcctt ccgtgttgta gaccaactcg
     1861 tttttctcga ggcggtagac cttggacgga cagacgtaga gacagggtat cgtatcgcac
     1921 gttcggcaca c
//
LOCUS       DATLMA010000066         2165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_247810, whole genome shotgun sequence.
ACCESSION   DATLMA010000066 DATLMA010000000
VERSION     DATLMA010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247810"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1424
                     /locus_tag="VNA10_00875"
     CDS             <1..1424
                     /locus_tag="VNA10_00875"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG36261.1"
                     /translation="FRGPTGASVCGLLRPEVVRDLNLAARGVQFIRPDPDVVALGDGR
                     ALPIWRDVQKTAKGLASVSAKDAQTYPRFIEFLSQFAEALDPILAMTPPSLPSPSWGE
                     GVSLFRRALRLRRLGKHVMQQMLRLPPMSIRDLLNEWFETELLKASFAVDGLIGTYEG
                     PFSPGTAFGLVPRFRPDVHGTGSAFVRGGMGALAEALGQAALDAGVTIRTGAEVTRIV
                     SADGRVTGVEVDGGTVGARVVASNADPKRTFLHLVEPEELGPEFLNHVRNFEMNGVVA
                     KVNFALDGAPRWSLAEDGVPPHFRVCPSLEYIERAYDDAKYGKPSAAPFLDVTVPTVV
                     DPDLAPPGKHVMSVLMQYAPFALRRGTWDTEGEKLAERATAILEEYMPGLERLILHRQ
                     VLTPVDLQERFGLTEGHIYHGEMTLDQSLVLRPVPGWSRYRTPIEGLYLCGSGSHPGG
                     GITGAPGYNAAREILKDWSQFSA"
     gene            1499..1957
                     /locus_tag="VNA10_00880"
     CDS             1499..1957
                     /locus_tag="VNA10_00880"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010916677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HVG36262.1"
                     /translation="MGDLLEPGTRAPDFEGTNQDGVPIRLRDFQGKPVVLFFYPEDDT
                     AGCTREACAFRDDTAAFRSAGAVVLGISVQDETSHRAFREKYHLPFDLVADPDKRITR
                     AYKALGFLGVAKRVTYIIGPDGTILSAYRTVDPKSHSQEALRILSEVRQR"
     gene            1954..>2165
                     /locus_tag="VNA10_00885"
     CDS             1954..>2165
                     /locus_tag="VNA10_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36263.1"
                     /translation="MMASKVKLPNVVIPKNIRLHYERFLDHFKGFENVDAVRGIFGPR
                     TKSVLRGLKVEFFSSKWGYMGVSDEDG"
BASE COUNT          375 a          683 c          723 g          384 t
ORIGIN      
        1 gtttccgcgg acccaccggg gcgtctgtgt gcggcctcct acgtccggaa gtcgtcaggg
       61 atctgaacct cgcggctcgc ggggtccagt tcatccggcc ggaccccgac gtcgttgcgc
      121 tgggcgatgg ccgggccctc cccatttgga gggatgtcca gaagaccgcg aagggcctcg
      181 cctcggtctc ggcgaaggac gcgcagacgt atccgcgatt catcgaattc ctgagccaat
      241 tcgccgaggc gctggatccg atcctcgcca tgacgccgcc tagtctcccg tcgccgagtt
      301 ggggagaagg cgtttcgctg ttccgccgcg cgctccggct gcggcgcctg ggcaagcacg
      361 tgatgcagca gatgctccgc ctcccaccga tgtcgatccg cgatttgctg aacgagtggt
      421 tcgagacgga gctgttgaag gcgagcttcg cggtcgacgg cctgattgga acctacgaag
      481 gcccgttctc gccgggcacc gccttcggac tggtccctcg gttccgcccc gatgtccacg
      541 ggaccggctc ggcgttcgtg cggggcggca tgggggcgct cgcggaggcg ctcggccaag
      601 cggccctgga cgccggggtg acgattcgga ccggcgcgga ggtgacgcgc atcgtcagtg
      661 ccgacggacg cgtaaccggg gtcgaggtgg acggcgggac ggtcggcgcg cgcgtcgtcg
      721 cgtcgaacgc cgacccgaag cggacgttcc tgcatctggt cgagcccgag gagctcggac
      781 cggaattcct gaatcatgtt cggaacttcg agatgaacgg agtcgtagcg aaagtcaact
      841 tcgccctcga cggcgcgccc cgatggtcgc tcgccgaaga cggggtgccg cctcacttcc
      901 gcgtatgccc gtcactcgaa tacatcgaac gggcgtacga cgatgcgaag tacggaaagc
      961 cctcggccgc gccgttcctc gatgtgacgg tcccgaccgt cgtggatccg gacctcgccc
     1021 ctccggggaa gcacgtgatg tccgtcctca tgcagtacgc accgttcgcc ctgcgtcgcg
     1081 ggacgtggga cacggaagga gagaaacttg ccgaacgtgc gacggcgatc cttgaggagt
     1141 acatgcccgg actggagcgc ttgatcctcc accggcaggt cctcacgccg gtcgacttgc
     1201 aagagcggtt cgggctgacg gaaggccaca tttaccacgg tgagatgacg ctggaccagt
     1261 ccctggtcct ccgtccggtc cccggttggt cacgctaccg gactccgatc gagggcctgt
     1321 acctgtgtgg atccggctcc caccccggtg ggggaatcac gggcgccccg ggctacaacg
     1381 ccgctcgtga gatcttgaaa gattggtcac agttttctgc ttgaggtcgt gtgcatagat
     1441 acgcgtcgga cggaacaggg caatcattga aatgcgacgg acggttcgaa ggcggccgat
     1501 gggcgacctc ctcgaacccg gcactcgcgc tcccgacttc gaggggacga accaggatgg
     1561 cgtccccatc cgccttcggg acttccaggg caagccggtc gtgctgttct tctatccgga
     1621 ggacgacacg gcgggatgca cgcgagaggc gtgcgccttc cgggacgaca cggcggcttt
     1681 ccgatcggcc ggagcggtcg tcttgggcat cagtgtgcaa gacgagacgt cgcaccgcgc
     1741 gtttcgcgag aagtaccact tgccgttcga tttggtggcg gatcccgaca agcgaatcac
     1801 gcgggcatac aaggcgttgg ggttcctcgg cgtcgccaag cgggtgacct acatcatcgg
     1861 cccggacggg accatcttgt cggcataccg aaccgtcgat ccgaagagcc acagccaaga
     1921 agccctacga atcctttcgg aggtgcggca acgatgatgg cttccaaggt gaaactcccg
     1981 aacgtcgtca ttccgaagaa catccgcctc cattacgagc gattcctcga tcacttcaag
     2041 ggcttcgaga acgtggacgc agtccgcggg attttcggac cgaggacgaa gtccgtcctg
     2101 cgcgggctca aggtcgaatt cttctcttcg aaatgggggt acatgggcgt cagcgacgag
     2161 gacgg
//
LOCUS       DATLMA010000067         1558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_790291, whole genome shotgun sequence.
ACCESSION   DATLMA010000067 DATLMA010000000
VERSION     DATLMA010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790291"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..516
                     /locus_tag="VNA10_00890"
     CDS             40..516
                     /locus_tag="VNA10_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36264.1"
                     /translation="MDWEQLHTDLQRVLEDLSEKNRRAPIIVEGEYDKRSLRALGVTG
                     DIQMINQGSTVFGLCEAIAAHHREAIILTDWDVRGGRLARQLRDGLSANGVRFDEDLR
                     ARLTVLCRKDITDVESLRGFVERVAEHASTGTRQRPSKRWYAERVQKRDTRRRSQK"
     gene            723..>1558
                     /gene="dnaG"
                     /locus_tag="VNA10_00895"
     CDS             723..>1558
                     /gene="dnaG"
                     /locus_tag="VNA10_00895"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase DnaG"
                     /protein_id="HVG36265.1"
                     /translation="MNIDPSTTKYLIQARLEAEGIVEKPDVVGAVFGQTEGLLGEELD
                     LRDLQKSGRIGRIEVDVQSKKGRSEGTILIPSSLDQVETSILAAALETIDRVGPCKAT
                     IKVDKVEDTRVTKRNKIIERARALLSSMVEESKTSGSDLLDEVRQSVQVSEIVSYGAE
                     RLPAGPNVADSDAIIIVEGRQDVLNLLRSGIKNAIAVEGTNVPKTIQELSKERALTAF
                     VDGDRGGDLILKELLQVAEVDFIARAPRGKEVEELTQKQIMKCLRNKIPADQYVEMYG
                     LSG"
BASE COUNT          339 a          463 c          515 g          241 t
ORIGIN      
        1 gaacccttat tgtccgcgcg ccgttcggtg agtgagccga tggactggga gcagctccac
       61 accgaccttc agcgcgtcct cgaggacctc tcggagaaga accggcgcgc accgatcatc
      121 gtggaaggcg aatacgacaa gcgctccttg cgggcgctgg gcgtgaccgg agacattcag
      181 atgatcaacc agggctccac cgtgttcgga ttgtgcgagg ccatcgcggc ccaccaccgc
      241 gaggcgatca tcctgacgga ctgggacgtg cggggcggac gtctcgcccg tcagctgcgg
      301 gacgggctct ccgcgaacgg ggtgcgattc gacgaggacc tgcgcgcgcg gctcacggtg
      361 ctctgccgaa aggacatcac ggacgtcgaa tcgctccggg gattcgttga gcgggttgca
      421 gagcatgcat caaccggcac ccgtcaacgg ccgtcgaagc gatggtacgc tgaaagggtc
      481 caaaagcggg acacgcgccg acgttcccaa aagtgagaat gtttgcccga acccttaaat
      541 aggcccgccc ccagttggga atcgggatag cggtaaaggc cgcgattcac agatcccact
      601 catccgaatc atcctttcct gcctccagga ctgcgaggcc gaaatgccct gcggggccga
      661 gagttgtccg gatagaggga cgtaaaccgc ggatttgacg gctagcccgg acaagtgcga
      721 aaatgaacat cgatccgagt acgactaaat atctcatcca ggcccgcctg gaggcggaag
      781 ggattgtcga gaagcccgac gtcgtcgggg ccgtgtttgg ccagacggaa gggctcctcg
      841 gcgaggaatt ggacttgcgt gacctgcaga agagcggccg catcggccga atcgaggtgg
      901 acgtccagag caagaaggga cggagcgaag ggacgatcct gatcccgtcc tcgctggatc
      961 aagtcgagac ctcgatcctg gcggcggccc tcgagacgat cgaccgggtc ggcccgtgca
     1021 aggcgacgat caaggtcgac aaggtcgagg acacgcgcgt cacgaagcgg aacaagatca
     1081 tcgagcgcgc ccgcgcgctc ctgtcgtcca tggtcgagga gtcgaagacc tccgggtccg
     1141 acttgctcga tgaggtgcgc cagagtgtgc aggtctcgga gatcgtgtcc tacggggccg
     1201 agcgcctgcc cgccggacca aacgtcgccg acagcgacgc gatcatcatc gtcgaagggc
     1261 gccaagacgt cctgaacctc ctccgatcgg ggatcaagaa cgcgatcgcc gtcgaaggca
     1321 cgaacgtccc gaagacgatc caggagcttt cgaaagaacg ggcgctcacg gccttcgtcg
     1381 atggagaccg cggtggcgat ctgatcctga aagaactcct ccaggtggcg gaggtcgact
     1441 tcatcgcgcg cgcgccgaga gggaaggaag tcgaggaact cacgcagaag cagatcatga
     1501 agtgcctgcg gaacaagatt cccgcggacc aatacgtcga aatgtacggg ctttcagg
//
LOCUS       DATLMA010000068         1512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_248275, whole genome shotgun sequence.
ACCESSION   DATLMA010000068 DATLMA010000000
VERSION     DATLMA010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248275"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VNA10_00900"
     CDS             <1..539
                     /locus_tag="VNA10_00900"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178285.1"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit A'"
                     /protein_id="HVG36266.1"
                     /translation="AGSIGQQAVRGERLSRGYWNRTLPHFKKGDLGAEAKGFVKSSYK
                     SGLHPTEYFFHAMGGREGLVDTAVRTSRSGYMQRRLINALEDLKVKEDGTVRNTADTI
                     IQFKFGEDGVDPSRSVQGRAVDIDDILQEVLGEEPSWKERLREQEMASYGLTEKDMYV
                     EISEEEVEVEEEEPPSEE"
     gene            542..>1512
                     /locus_tag="VNA10_00905"
     CDS             542..>1512
                     /locus_tag="VNA10_00905"
                     /inference="COORDINATES: protein motif:HMM:NF016859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit A''"
                     /protein_id="HVG36267.1"
                     /translation="MARATTIQALRNRGISKKTAEILADAGFTLEKLAASKPERLAKF
                     IPKKEADKVLKKLGTAPAEVKPVPKREKAKPAARPRRPSAKAAEAEPEAPLTIPVKAP
                     PLSAGEQEILDGLKEIGRWLPRFVVTELSKKLHGLKLSKKRLQEVLQRICEKFDLHAI
                     DANESAGIVSAQSIGEPGTQMTMRTFHYAGVAEMNVTLGLPRLIEIVDARRVPSTPIM
                     ELYVKSGHTDLERMRKIATEIEMTSLEDIASIETDLVNMRVLAYPDDHRMKSRGVTWP
                     ELEEKLKKLGEIQEVRRQVGNAEKKARALVVEAGEPSFKKLQRLVEQV"
BASE COUNT          323 a          466 c          521 g          202 t
ORIGIN      
        1 tggccggatc gatcgggcag caggcggtcc gcggggagcg cctgagccgc ggctactgga
       61 accgcaccct gccgcacttc aagaagggcg acctcggcgc ggaggcgaag ggcttcgtga
      121 agtcgtcgta caagagcggt ctccacccga cggaatactt cttccacgcg atgggcggac
      181 gcgaaggcct cgtcgacacc gccgtgcgga cgtcccggtc gggctacatg cagcgccgcc
      241 tgatcaacgc cctcgaggac ctgaaggtca aggaggacgg cacggtccga aacacggcgg
      301 acacgatcat ccagttcaaa ttcggggagg acggcgtcga tccgtcccgt agcgtccagg
      361 ggcgcgcggt cgacatcgac gacatcttgc aggaggtcct cggcgaggag ccgtcgtgga
      421 aggagcggct ccgcgagcag gagatggcct cctacggcct cacggagaag gatatgtacg
      481 ttgagatttc cgaggaagag gtcgaggtcg aggaggaaga gcctccgtcg gaggagtgac
      541 gatggcccga gcgacgacga ttcaggcgct gcggaaccgc gggatctcga agaagaccgc
      601 ggaaatcctg gcggacgccg gcttcacgct ggagaagctc gcggcctcga agccggagcg
      661 cctcgccaag ttcatcccga agaaagaggc cgacaaggtc ctcaagaaac tcggcacggc
      721 ccccgcggag gtcaagccgg tgccgaagcg cgagaaggcc aagcccgcgg cccgtccgcg
      781 gaggccctcg gccaaggcgg cggaggcgga gccggaagcg ccgctcacga tccccgtcaa
      841 ggcgccgccg ctctcggcgg gcgagcagga gatcctcgac ggattgaagg agatcggacg
      901 atggctcccg cggttcgtcg tgacggaact ctcgaagaaa ctccacggac tcaagctcag
      961 caagaaacgc ctccaagagg tcctccagcg gatctgcgag aagtttgacc tccacgcgat
     1021 cgacgcgaac gagtccgcgg gaatcgtgtc cgcgcagtcg attggcgaac ccgggaccca
     1081 aatgaccatg aggacttttc actacgcggg cgtcgcggag atgaacgtca cactcggact
     1141 cccgcggctg atcgagatcg tcgacgcgcg tcgcgtgccg tcgaccccga tcatggagct
     1201 gtacgtcaag tcgggtcaca cggatctcga gcgaatgcga aagatcgcga ccgagatcga
     1261 gatgacctcc ctcgaggaca tcgcctcgat cgagacggac ctcgtgaaca tgcgggtcct
     1321 cgcgtacccg gacgatcacc gcatgaaatc ccggggcgtc acctggccgg aactcgagga
     1381 gaagctgaag aaactcggcg agatccagga ggtccggcgc caggtcggga acgcggagaa
     1441 gaaggcgagg gcgctcgtcg tcgaagccgg agaaccgtcg ttcaagaagc tccagcgcct
     1501 cgtcgagcag gt
//
LOCUS       DATLMA010000069         1091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_730632, whole genome shotgun sequence.
ACCESSION   DATLMA010000069 DATLMA010000000
VERSION     DATLMA010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730632"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..683)
                     /locus_tag="VNA10_00910"
     CDS             complement(21..683)
                     /locus_tag="VNA10_00910"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HVG36268.1"
                     /translation="MKILDCDFPERLLYDVENNVWAELEGETARVGVNAMLGWLSGGI
                     TSVTFKERGGPVSRGRSMGAIEGPRHFDVVRSPLSGEILEYNEAVKESPMLLNRDPYG
                     AGWFAKVRPSRLREEAKFLKDVSSAKEELESRLKEMRIHCFAEFPDLEMFEIGVECAA
                     VLVRLNELIAGAQIGAVVHVASDDPTADIEMARWSDQTGNEVLESRFEDGVYHFIVKK
                     KR"
     gene            complement(721..>1091)
                     /locus_tag="VNA10_00915"
     CDS             complement(721..>1091)
                     /locus_tag="VNA10_00915"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36269.1"
                     /translation="EDYAASGGEEVFCSYEYERSGRVAAFVRMRHPSPAAHRAEMESS
                     CIVRELKVYGRVVPLGSRSDKAWQHRGLGRSLIGEVEKVAGEELGARRMVVTSAVGTR
                     NYYRALGYERLGPYMAKALR"
BASE COUNT          200 a          389 c          265 g          237 t
ORIGIN      
        1 tcccgataga aaagtagtcc tcatctcttc tttttcacga tgaagtggta gacgccgtcc
       61 tcgaaccgcg attcgagcac ctcgttccca gtctgatcgg accagcgagc catctcgata
      121 tccgcggttg ggtcgtctga ggcgacgtgc acgacggcac cgatctgagc acccgcgatg
      181 agctcgttga gccttacgag aaccgcggcg cattcgactc cgatctcgaa catttcaagg
      241 tcgggaaatt ccgcgaagca atgaatcctc atttctttca gtctgctctc gagctcctcc
      301 ttcgcgctcg acacgtcctt caagaacttg gcctcctcgc gcagccgcga cggtctgacc
      361 ttcgcgaacc aaccggcccc gtaagggtcg cggttgagga gcatcggact ctccttgacg
      421 gcctcgttgt actccaggat ctcccccgaa agtggggacc tcacgacgtc aaaatgtctg
      481 ggcccctcga tcgctcccat gcttctcccc ctcgagaccg gcccccctct ctctttgaag
      541 gtgacggagg taatcccgcc ggagagccag ccgagcatgg cgttgacgcc gacccgcgcg
      601 gtctccccct ccagctccgc ccagacgttg ttttctacgt cgtagagcag ccgctccggg
      661 aagtcgcagt ccaggatctt catcgggcat ttgtgtgcac cgtggctgat aagagttgag
      721 ctatctcagc gccttcgcca tgtatgggcc gagtctttcg taacccagag ctctgtaata
      781 attcctcgtc cccaccgcgc tcgtcacgac catcctcctc gcacctaact cctcgccggc
      841 gaccttctcc acctccccga tcaacgacct ccccaaccct ctgtgttgcc acgccttgtc
      901 gctcctgctc cccagaggaa cgaccctacc gtagaccttc aactccctca cgatgcaaga
      961 agattccatc tccgctctgt gagccgcggg agacggatgc ctcatcctca cgaaggcggc
     1021 cacccttccg ctcctttcgt actcgtagga gcagaagacc tcctcacctc cggaggcagc
     1081 gtagtcttca c
//
LOCUS       DATLMA010000070         1285 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_248457, whole genome shotgun sequence.
ACCESSION   DATLMA010000070 DATLMA010000000
VERSION     DATLMA010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248457"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VNA10_00920"
     CDS             <1..864
                     /locus_tag="VNA10_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015284035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon-insertion domain-containing protein"
                     /protein_id="HVG36270.1"
                     /translation="REVEKESPRKVLVPITRRPFVLSTGASETELLGDVRHDPYGGHP
                     QLGTQPYDRVVAGAIHEAHQGVLFIDELPLLGHLQRFILTAMQEKRFPISGRNPQSAG
                     ASVKVESVPCDFIFVGACNIQDLPHILSPLRSRITGGGYEILVETTMPDSDSNRVKLA
                     QFVAQEIAVDKRIPAATRDAVGVVIEEARRRAKTLDNKDKALSLRLRELGGLIRSAGD
                     IAVTEQSKLIDADHVQRAIKVSRSIEDQIRERYGSYTAGVGTDLSSAQREASPYHYWN
                     EHKADDVQGYQ"
     gene            complement(1087..>1285)
                     /locus_tag="VNA10_00925"
     CDS             complement(1087..>1285)
                     /locus_tag="VNA10_00925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36271.1"
                     /translation="SNWCGPNPAAVEAMLRTVGYRKVEMVSVSPSRFHRLVYAPLDSR
                     KTGTSLLAQMQHTRVVFHAWR"
BASE COUNT          254 a          421 c          394 g          216 t
ORIGIN      
        1 cgcgaggtcg agaaggaaag cccccgcaag gtcctcgtcc cgatcacgcg acggccgttc
       61 gtcctctcga ccggagcgag cgagaccgaa ctcctcggag acgtccgcca tgacccgtac
      121 ggtggtcatc cgcagctcgg cacgcaaccg tacgaccgcg tcgtcgccgg cgcgatccac
      181 gaagcacatc aaggcgtcct gttcatcgac gagctcccgt tactcggcca tctccagcgg
      241 ttcatcctga cggcaatgca ggagaagcgc ttcccgatct ccggccggaa tccacagagc
      301 gcgggtgcga gcgtcaaggt cgaaagcgtc ccgtgcgact tcatcttcgt cggcgcgtgc
      361 aacatccagg acctcccgca catcttgtcg ccgttgcgct cccgcatcac cggaggggga
      421 tacgagatcc tcgtcgagac gacgatgcct gactcggact cgaatcgcgt gaaactggcc
      481 cagttcgtgg cccaggagat tgccgtggac aagcgcatcc cggcggcaac tcgcgacgcg
      541 gtcggcgtcg tgatcgaaga agcccgccga cgggcgaaga ccttggacaa caaagacaag
      601 gccctcagcc tccggctccg ggaactcggc ggtctcatcc ggtccgcggg cgacatcgcg
      661 gtgacggagc aatcgaagct catcgacgcc gatcacgttc agcgggcgat caaggtctcc
      721 cggtcgatcg aagaccagat ccgggaacga tacggatcgt acaccgccgg cgtcgggacg
      781 gatctctcgt ccgcgcagcg cgaggcctcg ccgtaccact actggaacga gcataaggcg
      841 gacgacgttc agggctacca gtagctctat cggtttcccc ggtcgaatct ccgttccccg
      901 gtaccgtgat ggtcgctagg tcactggtca tcgattgaac ggaacccgat gccagtcatc
      961 tttggtccgg ctccctccag acagccagac aggagtgaca tcggcgattc aaacgcatga
     1021 gtgcgagcga gggtggggcc attcccgagg tcgttgctat ctcgtggcgc tagttggtct
     1081 cgacacttac cgccaagcat ggaagaccac cctggtgtgc tgcatttgag ccagcaggga
     1141 ggtaccggtc ttcctggaat ccagcggggc gtacacaagc ctgtggaacc gggacggaga
     1201 cacggagacc atctccacct tccgataacc gacggtgcga agcattgcct cgaccgctgc
     1261 ggggttcggg ccgcaccagt tcgac
//
LOCUS       DATLMA010000071         1076 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_488554, whole genome shotgun sequence.
ACCESSION   DATLMA010000071 DATLMA010000000
VERSION     DATLMA010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488554"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1076
                     /gene="dnaE"
                     /locus_tag="VNA10_00930"
     CDS             <1..>1076
                     /gene="dnaE"
                     /locus_tag="VNA10_00930"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HVG36272.1"
                     /translation="SLPVALGDRIAKLIPDGIDVNFERALKESAPLREAIQSDESVAR
                     VVQIAERLEGLSRHAGMHAAGVVIAPRPITDYLPLYRTNTGDVTTQFDMNAVEKMGLL
                     KIDFLGLITLDIMDAAVAGIRERTGDVVDLDRIPLNDEKTYELFRSGRTACVFQFDSS
                     GMRDLLRRAKPKVFSDLALLNALYRPGALDVGMVEEYVRRRNGSRKVTYPLPEIEDIL
                     RETLGILVYQEQVMLIASRVAGYSLAEADLLRKAIGKKKREIMAAEREKFLGRAAEHG
                     TTKEKAKELWALIEPFERYGFNKSHAVAYALVAYKTAFLKAHYPVDFLAAALSAEIGS
                     TDGIVKVIGDCVEMGIPVLPPDIN"
BASE COUNT          191 a          341 c          360 g          184 t
ORIGIN      
        1 tttcgctccc ggttgcgctc ggcgaccgga tcgccaagct catcccggac ggcatcgacg
       61 tgaacttcga gcgcgccctg aaggagtcgg cacccctgcg ggaggccatc cagtcggacg
      121 aatcggtcgc ccgggtcgtt cagatcgcgg agcggctcga gggtctctcc cgccacgccg
      181 ggatgcacgc ggcgggcgtt gtgatcgcgc cccgcccgat caccgattac ctcccgctgt
      241 accgcaccaa cacgggcgac gtcacgacgc agttcgacat gaacgcggtc gagaagatgg
      301 ggttgttgaa gatcgacttc cttggcctga tcacgctcga catcatggac gcggcggtgg
      361 cggggatccg ggagcggacg ggggacgtcg tcgacctcga tcggattccc ctgaacgacg
      421 aaaagaccta cgagctcttt cgctcgggcc ggaccgcgtg cgtgttccag ttcgactcgt
      481 cgggaatgcg ggatctcctg cggcgcgcca agccgaaggt cttctccgac ctggcgctct
      541 tgaacgccct ctaccgaccc ggggcgctcg acgtcggaat ggtcgaggag tacgtccggc
      601 gccgcaacgg aagccggaag gtgacttacc cgctgccgga gatcgaggac atcctccggg
      661 agacgctcgg gatcctcgtc taccaggaac aggtcatgtt gatcgcttcg cgcgtggcgg
      721 gctattccct cgcggaggcg gacctcctgc gaaaggcgat cggcaagaag aagcgcgaga
      781 tcatggcggc cgagcgggag aagttcctgg gccgcgccgc cgagcacggc acgacgaagg
      841 agaaggcgaa ggagctctgg gccttgatcg agccgttcga gcgttacggt ttcaacaagt
      901 ctcacgccgt ggcctacgcg ctcgtcgcct acaagaccgc ctttttgaag gcccactacc
      961 cggtggattt cctggcggct gcgctttccg ccgagatcgg atcgaccgac ggaatcgtga
     1021 aagtcatcgg ggattgcgtc gagatgggga ttcccgtgct gccgccggac atcaac
//
LOCUS       DATLMA010000072         2498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_790492, whole genome shotgun sequence.
ACCESSION   DATLMA010000072 DATLMA010000000
VERSION     DATLMA010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790492"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1473
                     /locus_tag="VNA10_00935"
     CDS             <1..1473
                     /locus_tag="VNA10_00935"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG36273.1"
                     /translation="RQYERDLHSFRYEIEEREYRLKAYEDKFNKIKQPPLLYAYVVRK
                     EGPDLDGNQVVVARATELLKVSTGLVDKSQLGVGQYVWVHPQTYAIVEGSAVRNEGVI
                     AKVVDMLDGKLVISVEGDMEKRLIDCDKNVFKKLKPGFQIGVLPPTMEVLDILPNLEV
                     KSLLLGEKPNVTYGEIGGLMEAIERIKDVVVLPYQEAKLFAQISLQAPRGILLYGPPG
                     CGKTLLVKAIATENDMTFFNVSIADVLSKWVGESERIIKEIFRQAHEKKPSIVFFDEI
                     EALFTVRGMMDTSGVHKNIIAQILSEMDGLVELHDVFVIGATNRADLVDPALLRPGRF
                     DEIIEIPRPDRRAAEEILRIYLNEDLPTAESLDETYGGHKEAVDALRRFVLDELYGEN
                     KWVKVKLDAEAKEAIKTVKRKDIISGAIIEAIVTTAKKNFVKRVIQLKKTERKKEGLT
                     MKDLEMAIDEESKEHAITEMYVYEKRQREVFRTGADPMVG"
     gene            1477..>2498
                     /locus_tag="VNA10_00940"
     CDS             1477..>2498
                     /locus_tag="VNA10_00940"
                     /inference="COORDINATES: protein motif:HMM:NF015119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HVG36274.1"
                     /translation="MRKMVQGTEHEYALYCRKMGTMGFDPHMMALDLLRDSDLHLAGE
                     FITNGSRVYYDVGHFEVSTAETTNFHDVVIWEKAGEKVLDWLRRVMEEKYTGDMKIHA
                     FKNNTSPDGTSYGSHENYCVSREVPFPGQYVRDLVPHLSTRIIYTGAGDIVRGKYVLS
                     PMAFLTSQVVSGETMHDTGILNTRDEPHADGRLWRRLHVIVGDALMNETAIMLRHFVT
                     SGVLQLMEDGKLSDVPRLKDPIRDLWHNVEIRNPEGWKVELEDGRVVSPIDIQRYYLE
                     KIEPIVKDDWEHRALRTFEEVLDGLENRRSKELAHRIEWLDRWFAIQEAGEKKAGPDV
                     EMMACK"
BASE COUNT          533 a          739 c          836 g          390 t
ORIGIN      
        1 cggcagtacg agcgcgacct ccactccttc cgctacgaga tcgaggaacg ggagtaccgc
       61 ctgaaggcgt acgaagacaa gttcaacaag atcaagcaac cgccgctcct ctatgcctac
      121 gtcgtccgca aggaaggccc cgacctcgac gggaaccagg tcgtcgtcgc acgcgcgacg
      181 gaattgctca aggtctcgac cgggttggtc gacaagtcgc agctcggcgt cggccaatac
      241 gtctgggtgc acccgcagac gtacgcgatc gtcgaaggta gcgcggtgcg caacgagggc
      301 gtcatcgcga aggtcgtcga catgttggac ggcaaactcg tgatctccgt ggaaggggac
      361 atggagaagc gcctgatcga ctgtgacaag aatgtcttca agaagctcaa gcccggattc
      421 cagatcggcg tcctgcctcc gacgatggag gtcctcgaca tcctcccgaa cctcgaggtc
      481 aagtccctcc tcctcggcga gaagccgaac gtgacgtacg gcgagatcgg cgggctcatg
      541 gaggcgatcg agcggatcaa ggacgtcgtc gtgctcccat accaggaggc gaagctgttc
      601 gcgcagatct ccctccaggc gccgcgcggg atcctgctct acggtccccc gggttgcggc
      661 aagaccctcc tcgtgaaggc gatcgcgacg gagaacgaca tgacgttctt caacgtcagc
      721 atcgcggacg tcctctcgaa gtgggtcggg gagagcgagc gcatcatcaa ggagatcttc
      781 cgccaggcgc acgagaagaa gccgagcatc gtcttcttcg atgagatcga ggcgctgttc
      841 acggtccgcg gcatgatgga cacgtctggc gtccacaaga acatcatcgc gcagatcctg
      901 agcgagatgg acggcctcgt cgagctgcac gacgtcttcg tgatcggcgc gacgaaccgc
      961 gcggacctcg tggacccggc cctcttgagg ccggggcggt tcgacgagat catcgagatc
     1021 ccgcgtccgg accgcagggc ggcggaagag atccttcgga tctacctgaa cgaggacttg
     1081 ccgaccgcgg agagcctcga cgagacgtac gggggccaca aggaggcggt cgacgcgctc
     1141 cgccgcttcg tcctcgatga actctatgga gagaacaagt gggtcaaggt caagctcgac
     1201 gccgaggcga aagaggcgat caagaccgtg aaacggaagg acatcatctc cggcgccatc
     1261 atcgaggcga tcgtgacgac cgcgaagaag aacttcgtga agcgggtcat ccagctgaag
     1321 aagacggagc ggaagaagga gggcctcacg atgaaggacc tcgagatggc gatcgacgag
     1381 gagtcgaagg agcacgcgat cacggagatg tacgtctacg agaagcgcca gcgggaggtc
     1441 ttccggaccg gtgcggaccc gatggtcggg tgacgcatga ggaagatggt ccaggggacc
     1501 gagcacgagt acgcgctgta ctgccgcaag atgggcacga tggggttcga cccccacatg
     1561 atggcgctcg acctgctgcg cgattcggac ctgcacctcg ccggcgagtt catcacgaac
     1621 ggctcgcgcg tctactacga cgtcgggcat ttcgaggtca gcaccgcgga gacgacgaac
     1681 ttccacgatg tcgtcatctg ggagaaggcc ggggagaagg tcctcgactg gctccgccgc
     1741 gtcatggagg agaagtacac cggcgacatg aagatccacg cgttcaagaa caacacgtcg
     1801 ccggacggga cgtcgtacgg ttcgcatgag aactactgcg tctcccggga ggtgccgttc
     1861 ccgggtcagt acgtccgcga cctggtcccg cacctgtcca cgcggatcat ctacaccggg
     1921 gcgggcgaca tcgtccgcgg gaaatacgtg ctctcgccga tggccttcct gacgtcccag
     1981 gtggtgagcg gggagacgat gcacgacacc ggcatcctga acacgcgcga cgagccgcac
     2041 gccgatggcc gcctctggcg acgtctgcat gtgatcgtcg gagacgcgct catgaacgag
     2101 acggcgatca tgctccgtca ctttgtcacg tcgggcgtgc tgcagctcat ggaagacggg
     2161 aagttgagtg acgtccctcg gctcaaggac ccgatccggg atctgtggca caacgtcgag
     2221 atccggaatc cggaggggtg gaaggtcgag ctggaggacg gccgggtcgt gtcgccgatc
     2281 gacatccagc gatactacct cgagaagatc gagccgatcg tgaaggacga ctgggaacac
     2341 cgcgcgttgc ggacgttcga agaagtcttg gacggcctcg agaaccggcg ctcgaaggag
     2401 ctcgcgcacc ggatcgaatg gctcgatcgg tggttcgcga tccaggaggc cggcgagaag
     2461 aaggccgggc ccgacgtcga gatgatggcg tgcaagca
//
LOCUS       DATLMA010000073         1045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_550767, whole genome shotgun sequence.
ACCESSION   DATLMA010000073 DATLMA010000000
VERSION     DATLMA010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550767"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VNA10_00945"
     CDS             <1..718
                     /locus_tag="VNA10_00945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HVG36275.1"
                     /translation="LTAQAFNLAEIYQTPIIVISDLYLGEGYRTVEKPDFNVPIVRGM
                     SAANGAEVKDFKRYRLTESGVSPRAIPGMKGYQFVAATDEHMENSELISDVLAGIPEY
                     VAERNRMHEKRMRKLDGLRKDTPPPELWGPEDADLTLIHWGSTWGAAHEAIQNVEGRG
                     IRVNSLEFPTLFPFHTDATLAFLKNVKQSLAIEGNYTGQFTRLLRSETGYKPDHFYGK
                     YDGEPFTWRDIADKILEAVA"
     gene            715..>1045
                     /locus_tag="VNA10_00950"
     CDS             715..>1045
                     /locus_tag="VNA10_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018193851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HVG36276.1"
                     /translation="MKLEFEMDTYKSETKPTWCPGCGDFAVLRALQMAIHTLQLEPWN
                     LVIVSGIGCSSNLPHFLSTYGFHAIHGRALPVAEGVKLANPDLQVIVTGGDGDGYGIG
                     VGHFIHAM"
BASE COUNT          212 a          332 c          336 g          165 t
ORIGIN      
        1 gctgaccgcg caagccttca acctcgcgga aatctatcag acgccgatca tcgtgatctc
       61 ggacctctac ctgggcgaag gctaccgcac ggtcgagaag ccggacttca acgtgccgat
      121 cgtgcgcggc atgtccgccg cgaacggggc cgaggtgaag gacttcaagc gataccgcct
      181 cacggagagc ggcgtgagcc cgcgggcgat tccgggcatg aaaggatatc agttcgtcgc
      241 cgcgacggac gagcacatgg agaacagcga gctcatctcc gacgtcctcg ccgggatccc
      301 ggaatacgtc gcggagcgga atcggatgca cgagaagcgg atgcggaagc tcgacggcct
      361 gcggaaggac acgccgcccc cggagctctg gggacccgag gacgcggacc tcaccttgat
      421 ccactggggg tccacctggg gcgccgccca cgaagcgatc cagaacgtcg agggacgtgg
      481 catccgggtg aacagtttgg agttcccgac cctgttcccg ttccacacgg acgcgacgct
      541 cgccttcctc aagaacgtga aacagagcct cgcgatcgag ggcaactaca ccggccagtt
      601 cacgcgactc ctccgctcgg agaccggtta caagccggac cacttctacg ggaagtacga
      661 cggcgagccc ttcacctgga gagacatcgc ggacaagatc ctggaggcgg tcgcatgaaa
      721 ctcgagttcg agatggacac atacaagtcc gagacgaagc cgacctggtg tccggggtgc
      781 ggggacttcg cggtccttcg ggcgctccag atggcgatcc atacgctcca gctcgagccc
      841 tggaacctcg taatcgtctc gggcatcggc tgctcaagca acttgccgca cttcctctcg
      901 acgtatggat tccatgcgat tcacggccgg gcgctcccgg ttgcggaagg cgtgaagctc
      961 gcgaatccgg atctccaggt catcgtcacg ggaggcgatg gcgacgggta cgggatcggc
     1021 gtggggcact tcatccacgc gatgc
//
LOCUS       DATLMA010000074         1484 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_248638, whole genome shotgun sequence.
ACCESSION   DATLMA010000074 DATLMA010000000
VERSION     DATLMA010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248638"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..>1484
                     /locus_tag="VNA10_00955"
     CDS             56..>1484
                     /locus_tag="VNA10_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HVG36277.1"
                     /translation="MADAYRTNKADTLKEAEALHRALAEGRVSLVEEGAVNEAMLKES
                     LDSLRGQFDPVNGGIAGQQKFPHPGTMEWVMARYHRTREEGLQKIFARTLSSMAKGGV
                     YDQIGGGFHRYSTDSRWIVPHFEKMLYDNAGLLANYVHAWQLTREPLYRETAEGILAW
                     SEEVLSDRQRGGYFASQDADVGLDDDGDYFTWTLDELKAAVNADEVRVLALYFEVATR
                     GEMHHDPKKNVLFVDQEPEAIAKSIGMSTDRVRELIASGKRKLKIARDKRPMPGVDHT
                     IFASWNGMMITAVFEAAMAFDRKDVRMFALKSLQRVLSEMWSKDRGMWHALADGERKV
                     RGLLEDHVYVVDALLSAYTATGDSAHLRSAEEIMVFTLDHFWDKAGGFVDIAEDLHDN
                     VGLTLKEVRRRPVEDSPYAGANAVAALCLARLHALTGNDDYRLHHDALMTAFAGEASR
                     YGPVFTGTYHLAAELWIHPPAEVVVL"
BASE COUNT          277 a          455 c          501 g          251 t
ORIGIN      
        1 ctttccgccg aaggactcct acgggcggcc gagcttccgc cgcgtccttc tttcgatggc
       61 ggacgcgtac cgtacgaaca aggcggacac gctgaaagag gcggaagccc tgcatcgagc
      121 ccttgccgag ggccgcgtct ccctcgtgga agagggcgcc gtgaacgagg ccatgctgaa
      181 ggagagcctc gactcgcttc gcggccagtt cgatccggtg aacggcggca tcgctggcca
      241 acagaagttc ccgcacccgg ggacgatgga atgggtcatg gcccgctacc atcggacgcg
      301 ggaggaaggc ctccagaaaa tctttgcgcg cacgctgtcg tcgatggcga agggtggcgt
      361 ctacgaccag atcggcgggg ggttccatcg gtactcgacg gattcacgtt ggatcgtccc
      421 gcatttcgag aagatgttgt acgacaacgc aggcctcttg gcgaactacg tgcacgcgtg
      481 gcagctcacc cgcgagccgc tgtaccgcga gaccgccgaa gggatcctcg catggtccga
      541 agaggtcctc tcggaccggc agcgcggtgg atatttcgcg agccaggacg cggacgtcgg
      601 cctcgacgac gacggcgact acttcacgtg gacgttggac gaactcaagg ccgcggtgaa
      661 cgcggacgag gtccgggtcc tcgcgctgta cttcgaggtc gcgacgcggg gcgagatgca
      721 tcacgacccg aagaagaacg tcctcttcgt cgaccaagag ccggaggcga tcgcgaaatc
      781 gatcggcatg tcgacggatc gcgttcggga gctcatcgcg agcggcaaac gcaagctgaa
      841 gatcgcgcgc gacaaacgtc cgatgccagg cgtggatcac acgatcttcg cgtcgtggaa
      901 cgggatgatg attaccgcgg tgttcgaggc cgcgatggcg ttcgatcgga aggacgtccg
      961 catgttcgcg ctgaaatcgc ttcagcgggt cctgtcggag atgtggtcga aggatcgcgg
     1021 gatgtggcac gcgctcgcgg acggcgaacg aaaagtccgc ggccttctcg aggaccatgt
     1081 gtacgtggtg gacgctctcc tgtccgcata cactgcgacg ggcgattccg cgcacctccg
     1141 aagcgccgaa gagatcatgg tcttcacgtt ggaccacttc tgggacaaag cgggcggctt
     1201 cgtcgacatc gccgaggacc tgcacgacaa cgtgggcctc accctgaagg aggtccgtcg
     1261 tcgtccggtc gaagactccc cgtacgcggg ggcgaacgcg gtggctgcgc tttgcctggc
     1321 gcgtctccac gcgctcaccg ggaacgacga ttaccggttg caccacgacg cgttgatgac
     1381 cgcattcgcc ggggaggcga gccggtacgg tcccgtcttc accggcacgt accatctcgc
     1441 cgcggaattg tggattcacc cacccgcaga ggtcgtggtg ctcg
//
LOCUS       DATLMA010000075         1533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_128074, whole genome shotgun sequence.
ACCESSION   DATLMA010000075 DATLMA010000000
VERSION     DATLMA010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128074"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /gene="rapZ"
                     /locus_tag="VNA10_00960"
     CDS             <1..728
                     /gene="rapZ"
                     /locus_tag="VNA10_00960"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HVG36278.1"
                     /translation="LLLQVTAPRVGIILDVRNPDFASRFPPILARVRERVPSTRLVFL
                     DANEETLIRRFSETRRPHPLSVDRPLLTALRNERELLEDVRALADVVVDTSSMTVHEL
                     RSFMQKTFVGEESSARMVVSATSFGYKFGIPHDVDLIFDVRFLANPHFVPELKPKIGT
                     DPAVAAYIEKDPQTAEFLKRLVEFLDYLMPLYEREHKSYLSIGIGCTGGKHRSVYVAH
                     ELAKKLKQRGLPVRVSHRDATRE"
     gene            771..1214
                     /locus_tag="VNA10_00965"
     CDS             771..1214
                     /locus_tag="VNA10_00965"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HVG36279.1"
                     /translation="MIGILLVTHGGLAEELKAAALTIQPEIEQIVAVALDWNQVGDEA
                     SRRIAEGLEDADRGEGAIILTDMFGGTPTNLTLPFLKRDRVEIVTGVNLPMVLKCAAL
                     QKSGKPVVEIAHVAKDRGQRSIYVASDLLADEVVSAAAAEDGEVR"
     gene            1211..1480
                     /locus_tag="VNA10_00970"
     CDS             1211..1480
                     /locus_tag="VNA10_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HVG36280.1"
                     /translation="MIERELAIRNRLGLHARAAAKFVQTASRFKSEVKIRKNGEEVDG
                     KSILGLLLLAASQGTEITVAVSGEDEDAAFAAVEDLIIRSFDEDQ"
BASE COUNT          279 a          489 c          511 g          254 t
ORIGIN      
        1 cccttctttt acaggtcacc gcgccgcggg tcgggatcat cctggacgtt cgcaatcccg
       61 acttcgcgtc gcgcttcccg cccatcctcg cgcgcgtgcg cgaacgggtt ccgtcgacgc
      121 gcctcgtctt cttggacgcg aacgaagaga ctctgatccg gcgcttctca gagacgcggc
      181 gtccgcaccc tctctccgtc gaccggccgc tcctgaccgc gttgcgcaac gagcgcgagc
      241 ttctcgaaga cgtccgggcg ctcgcagacg tcgtcgtcga cacatcctcg atgacggtgc
      301 acgagctgcg ctctttcatg cagaagacct tcgtggggga ggagagctcg gcgcggatgg
      361 tcgtttcggc gacctccttc ggctacaagt tcggcattcc gcacgacgtc gacctgatct
      421 tcgacgtccg gttcctcgcg aacccacact tcgtgccgga gctgaagccg aagatcggga
      481 cggatcccgc cgtcgccgct tacatcgaga aggacccgca gactgcggag ttcctgaaaa
      541 ggctggtcga gttcctcgac tacctgatgc ctctctacga gcgcgagcac aagagctacc
      601 tctcgatcgg aatcggctgc accggaggaa agcaccgttc ggtatacgtc gcccacgagc
      661 tcgcgaagaa actgaaacag cgagggctgc cggtgcgggt ctcgcaccgc gacgccacgc
      721 gcgaatgagg agataatttc ggggatggct gcgagcgtgc gggcgggggg atgatcggga
      781 tcctgctggt cacgcatggc gggctggccg aggagctgaa ggccgcagcg ctcacgatcc
      841 agccggagat cgagcagatc gtcgcggttg ctctcgactg gaaccaggtc ggcgacgagg
      901 cgagccgccg catcgcagag ggtctcgagg acgccgaccg cggcgaaggt gccatcatcc
      961 tgaccgacat gttcggcgga acgccgacga acctcacgct gcctttcctg aagcgggatc
     1021 gcgtcgagat cgtgaccggg gtcaatctcc cgatggtcct gaagtgcgct gcgctccaga
     1081 agagcggcaa accggtcgtc gagatcgctc acgtcgcgaa ggaccggggt cagcgctcga
     1141 tctacgtggc gtcggatctg ctcgcggacg aggtcgtttc ggcggcggcg gcggaggacg
     1201 gcgaagtccg atgatcgagc gggagctggc gatccgcaat cggctcgggc tccacgcccg
     1261 cgcggcggcg aagttcgtcc agacggcgag ccgcttcaag tccgaggtca agatccggaa
     1321 gaacggagaa gaggtcgacg gcaagagcat tctcggtctc ctcctcctcg ccgcgtcgca
     1381 agggaccgag atcaccgtgg cggtctcggg cgaggacgaa gacgccgcgt tcgccgccgt
     1441 ggaagatctg atcatccgga gcttcgacga ggaccaatga gccagaccgg aggtttccgg
     1501 gaaaaggaga cctcgctccg gcttgcgaca cca
//
LOCUS       DATLMA010000076         1432 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_790990, whole genome shotgun sequence.
ACCESSION   DATLMA010000076 DATLMA010000000
VERSION     DATLMA010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790990"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            586..1263
                     /gene="rpsB"
                     /locus_tag="VNA10_00975"
                     /pseudo
     CDS             586..1263
                     /gene="rpsB"
                     /locus_tag="VNA10_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003220918.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
BASE COUNT          285 a          462 c          465 g          220 t
ORIGIN      
        1 caggtaccac ccgccacgcg cgaggcgcgt cccctccggg acgaggggca tcgctttgag
       61 atcggtgtcc gagaacgaaa gcaacacgcg gtgctcagcg cggacgtcat tcgccgtgcg
      121 ccgctcgatg tccggacgcg cgctcatcgg gtcctcggac atgaggactt cccatcgccg
      181 ggatgtgcct cgcgggactc tcgcttcgtc gtacttagcc atttgtctct cttattactc
      241 cgcattcgac atgccgagcg tgaaaaggac ataagaaaag cgactccgat cgaccggcaa
      301 ttgaccgcgg cgctgtccgg ctgggggtgg cgcggagagc gggttgggca gcgtcggggt
      361 cttctgagcg agcggcccct ggccggcggt ccagcgcgat cccacgaggg gccgagcgaa
      421 gaagccccgg cgctgctcac tccgcggagc cgtcacatga cccgcggccc ctttaaggga
      481 acgctagccg gtacaattga cggagatcga gcacgagctc ggtacttcgc acgcttgcca
      541 agtcccctcg caggtccggc aggcggagga acaagggaga cacacatggc cgtcgtcacg
      601 atgaagcagc tcctcgagtc cggggtccac ttcggccacc aggctcgccg ctggaaccca
      661 aagatgaagc gcttcatctt catggagcgc aacggcattc acatcatcga cctacagcaa
      721 accctcgcgc gcgtggagga ggcgtacatc ttcatgcgcg acctagctgc cgacggtggg
      781 caggtgctct tcgtcggaac gaagaagcag gctcaggagt ccatctccga ggaagccaag
      841 cgagccggga tgcacttcgt gaatcagcgg tggctcggcg gattcctcac gaacttcgtc
      901 acgatccaaa agcgcatcca gcggctcaac gatctggtgg agcgcaagga gcgcggcgac
      961 ttcgcgacga tgcccaagaa ggacgcgcag cgactggatg acgagctgac gcacctcgat
     1021 cgctatttct ccggcgtgcg tgagctgcgc cggccgccca ccgcgatctt cgtcgtcgat
     1081 ccgcaccgcg agcacatcgc ggtagaggaa gcgcgacggc tcgagatccc gatcatcgcg
     1141 atggtcgaca cgaactgcga cccggacctc atcgacgtga tcattccggc gaacgacgac
     1201 gcgatccggg ccgtgaagct catctgccag aagatggccg acgcgatcct cgagggccgt
     1261 cagcagttcg atgccgcgcg caaggaagcg acgcccgagg acatgggtta cgcaccatcg
     1321 acaacggcgg agcagtacga aggtggcatc ggcgtcccgc gggcgaagcg cactccgcgc
     1381 gtgtatgagc ccgaggagga cgaggactac ccgctcggcg gccagcgcta cg
//
LOCUS       DATLMA010000077         1047 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_67533, whole genome shotgun sequence.
ACCESSION   DATLMA010000077 DATLMA010000000
VERSION     DATLMA010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67533"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VNA10_00980"
     CDS             <1..715
                     /locus_tag="VNA10_00980"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG36281.1"
                     /translation="RRWGLKKVMKKTKGLNLLFAGPPGTGKTMAAEAIASELGRPLHV
                     VNYAQLENMWVGETEKNIEHVFHTALEAGAVLFFDEADAVFQRRGIMATPWMNRDVNV
                     LLAQMENYPGVVVLATNLAKVMDRALDRRVDIAVEFPIPDADLREKIYARLVPKEAPL
                     GKDVEFETLAKKYVMSGGSILNVVRQAMRSSLRRGKRHRITMADFTHAAESEMKKSAL
                     MSADHLQEPVRRERIRGYA"
     gene            complement(748..>1047)
                     /gene="purS"
                     /locus_tag="VNA10_00985"
     CDS             complement(748..>1047)
                     /gene="purS"
                     /locus_tag="VNA10_00985"
                     /inference="COORDINATES: protein motif:HMM:NF004630.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HVG36282.1"
                     /translation="GSQKGLRGRRRCRIDGVAMVQVRVEIRLKKGVTDPEGDNVQKAL
                     NLLGFKGVRSVRSSKLFLIDLQTKDARAARKEVEEMCRHLLANPVIHDYAIDIEK"
BASE COUNT          195 a          321 c          343 g          188 t
ORIGIN      
        1 ccgccgctgg ggcctgaaga aggtgatgaa gaagacgaag gggctgaact tgctcttcgc
       61 gggcccgccc ggcaccggca agacgatggc ggccgaggcg atcgcgagcg agctcggacg
      121 gcccctccat gtcgtcaact atgcgcaact cgagaacatg tgggtcgggg agacggagaa
      181 gaacatcgag catgtcttcc acacggccct cgaggcgggg gcggtcctct tcttcgacga
      241 ggcggacgcc gtcttccaac gacgcggcat catggcgact ccatggatga accgcgacgt
      301 gaacgtattg ctggcccaga tggagaatta ccccggcgtc gtggtcctcg cgacgaacct
      361 cgcgaaggtg atggaccgag ccctcgaccg acgggtcgac atcgccgtcg agttcccgat
      421 tccggatgcg gacctgcggg agaagatcta cgcccgcctg gttccgaaag aggcccccct
      481 gggcaaagac gtggagttcg agacgctcgc gaagaagtac gtgatgagcg gcggttcgat
      541 cctgaacgtc gtgcgccagg cgatgcgctc gtcccttcgt cgcgggaagc gtcatcggat
      601 cacgatggcg gacttcaccc acgcggcgga gagcgagatg aagaagtcgg cgctcatgtc
      661 ggccgatcac ttgcaggagc cggtccgccg cgaacggatc cgcgggtacg cctgaacctc
      721 acttcgtgcg gacagcctgc gggagtctca cttctcgatg tcgatcgcgt agtcgtggat
      781 cacgggattc gcgaggaggt ggcggcacat ctcctcgact tccttgcggg ccgctcgggc
      841 gtctttggtc tgcaaatcga tcaggaacag tttcgagctg cggacgctcc ggaccccttt
      901 gaatccgagg agattgaggg ccttctgaac attgtcacct tcgggatccg tgacgccctt
      961 cttcagccga atctcgacgc ggacctggac catcgcgact ccgtcgatgc ggcaacggcg
     1021 ccgtcctctt agcccttttt gggaacc
//
LOCUS       DATLMA010000078         1876 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_249252, whole genome shotgun sequence.
ACCESSION   DATLMA010000078 DATLMA010000000
VERSION     DATLMA010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249252"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /gene="tdh"
                     /locus_tag="VNA10_00990"
     CDS             <1..1056
                     /gene="tdh"
                     /locus_tag="VNA10_00990"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018756513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HVG36283.1"
                     /translation="VRVMASTMKAAVKLKSAPGSTEVRKVPIPEPTPSEVLIRVDIAS
                     ICGTDVHIYDWDAWAAARIKVPLVQGHEFAGHIEKLGSGVTGLRKGDYVSAEGHIACG
                     RCYQCRTGNAHVCKNVSILGIDRDGSFEEFMTVPASNVIVNDDDLPLDLATMQDPLGN
                     AVYTVTNANVPGKTVAIFGLGPIGLMAVALCRGMAARSVIAIGHKNQYRMDLAKKVGA
                     NVVLRSGESLVDQVMDATAGEGVDEVLEFSGSEAAVQQAIKVVRPAGGIHLLGLFAKP
                     LSLDISEFVTKGLSMYGIHGRLMYKTWMQMGGLLKSGNVNLKPILTHKFPLDDYNEAM
                     GVMRSGNCGKVAFPMAV"
     gene            1059..>1876
                     /locus_tag="VNA10_00995"
     CDS             1059..>1876
                     /locus_tag="VNA10_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008604751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36284.1"
                     /translation="MSKRDPTSWMRAEYEALVAQSLDWKLRVLQGPSAPRSVVDGKNV
                     IMLCSNNYLNLSNHPKVKRAAREAIKTHGAGSGSVRPIAGNMDLHEELERRIARFKRR
                     EAALFFMSGFAGNAGLIPQLAGEGDAILTDELNHGSIIDGVRLTKAQRVIYRHRDVAD
                     LERALKEVDGWAKKILVITDGVFSMDGDIAPVGDIARVGEEFGAMIYVDDAHGEGVLG
                     EGGRGVASHFHVEEKIQIELGTFSKALGVVGGYVAGSNDLRNFALNKSRTWLLSG"
BASE COUNT          376 a          562 c          644 g          294 t
ORIGIN      
        1 gtccgggtca tggcgtcaac gatgaaagct gcggtgaagc tcaaatcggc gcccggaagc
       61 acggaagtcc gcaaggtccc gatccccgaa ccgacaccgt cggaagtcct aattcgcgtg
      121 gacatcgcgt cgatctgcgg caccgatgtg cacatctacg attgggacgc gtgggcggcc
      181 gcacgaatca aggtgccgct cgtccagggg cacgagttcg ccggacacat cgagaaactg
      241 ggctccgggg tcacgggcct ccggaaggga gattatgtga gcgcggaggg ccacatcgcc
      301 tgcggccgct gttaccagtg ccggaccggg aacgcccacg tctgcaagaa cgtgtccatc
      361 ctcggcatcg accgggacgg atcgttcgag gagttcatga cagtccccgc atcgaatgtg
      421 atcgtgaacg acgacgactt gccgctcgac ctcgccacga tgcaagatcc cctgggaaac
      481 gcggtgtaca cggtcacgaa cgcgaacgtg cccgggaaga cggtcgcgat cttcggcctc
      541 ggtccgatcg gcctcatggc ggtcgcgctc tgccgcggga tggcggcgcg gagcgtgatc
      601 gcgatcggcc acaagaacca ataccggatg gaccttgcca agaaagtggg agcgaacgtc
      661 gtcctccggt ccggcgaatc cctcgttgac caggtgatgg acgcgacggc gggcgaaggg
      721 gtggacgagg tgctcgagtt ctccgggagc gaggccgccg tgcagcaggc gattaaggtg
      781 gtccggcccg cgggcgggat ccacttgctc gggctgttcg cgaaaccgct cagcctcgac
      841 atctcggagt tcgtcacaaa aggactctcg atgtacggca tccacggacg cctgatgtac
      901 aagacgtgga tgcagatggg tgggctcctg aagagcggga acgtgaacct gaaacccatc
      961 ctgacccaca aattcccact ggacgactac aacgaggcga tgggcgtgat gcgcagcggg
     1021 aactgcggaa aggtcgcctt cccgatggcg gtgtgacgat gtcgaagcga gacccgacct
     1081 catggatgcg cgcggagtac gaggcccttg tggcgcagag cctggactgg aagttgcgcg
     1141 tcctccaggg cccgtccgcg ccgcgaagcg tcgtcgacgg aaagaacgtc atcatgctct
     1201 gttcgaacaa ctatctcaat ctctcaaacc acccgaaggt gaagcgggcc gcgcgcgagg
     1261 cgatcaagac ccacggcgcc gggagcggga gcgtgcggcc gatcgcgggc aacatggacc
     1321 tgcacgagga actcgagcgg cgcatcgccc ggttcaagcg ccgcgaagcg gccctgttct
     1381 tcatgagcgg attcgcaggg aacgcgggac tcatccccca gctggcaggc gaaggcgacg
     1441 cgatcctgac ggacgagctg aaccacggga gcatcatcga cggggttcga ctgacgaagg
     1501 cccagcgggt catctaccga caccgcgacg tcgcggatct tgagcgggcg ctcaaagagg
     1561 tcgatggctg ggcgaagaag atcctcgtca tcacggatgg ggtgttctcg atggacggtg
     1621 acatcgcgcc cgtgggcgac atcgcccggg tcggcgagga gtttggcgcg atgatctatg
     1681 tcgacgacgc ccacggcgag ggcgtgctcg gcgagggtgg tcgcggcgtc gcgtcccact
     1741 tccacgtcga ggagaaaatc cagatcgaac tcggcacgtt ctcgaaggcc ctcggggtcg
     1801 tcggtggata cgtcgccgga tcgaacgacc tgaggaactt tgcgctcaac aagtcgcgga
     1861 cgtggctctt gagcgg
//
LOCUS       DATLMA010000079         1857 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762 k141_8815,
            whole genome shotgun sequence.
ACCESSION   DATLMA010000079 DATLMA010000000
VERSION     DATLMA010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8815"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1857)
                     /locus_tag="VNA10_01000"
     CDS             complement(<1..>1857)
                     /locus_tag="VNA10_01000"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit A'"
                     /protein_id="HVG36285.1"
                     /translation="ARPEWMVLTALLVPPVTVRPSITLESGDRSEDDLTHKLVDVLRI
                     NQRLRENRDAGAPQLIVEDLWELLQYHVTTYFDNQTSGIPPARHRSGRPLKTLVQRLK
                     GKEGRFRSNLSGKRVNFSARTVISPDPILSINEVGVPVEAARELTVPVHVQAYNLDIV
                     KGWVKRGPTPLGPLGEYAPGVNYVIRPDGRRIRVTEKNAEVVAEAVEIGYTVERQLVD
                     GDIVLFNRQPSLHRMSMMAHEVRVMPHKTFRFNLAVCPPYNADFDGDEMNLHVLQSEE
                     ARAEARVLMRVQEHILSPRFGGPVIGGIHDHISGSFLLTHKESKFTREEVTFILTKID
                     MRDIPPPDIKRGGKEFWSGKALFSAILPKNLSMTFKSSIAPKGDIGLKELKDEDSLVV
                     IKNGVIASGTIDENAIGAFKGKIVDKLARDYGPDAAREFIDRATKMAIGAIMIRGFTT
                     GIDDEDIPEEAKKQITDVLKTAIEKVEDLVESYKRGELEQMPGRSLEETLEVEAMKIL
                     GRARDQAGQIAGKHLGIENSAVIMARSGARGSMLNLSQMAGSIGQQAVRGERLSRGYW
                     NRTLPHFKKGDLGAEAKGFVKSSYKSGLHPTEYFFHAMGGREGLVDTAVRTSR"
BASE COUNT          285 a          615 c          590 g          367 t
ORIGIN      
        1 cgggacgtcc gcacggcggt gtcaacgagg ccttcgcgtc cgcccatcgc gtggaagaag
       61 tactccgtcg gatggaggcc gctcttgtac gacgacttca cgaagccttt cgcctctgca
      121 ccgagatccc ctttcttgaa atgcgggagc gtacggttcc agtagccgcg gctcaagcgc
      181 tccccgcgga ccgcctgctg cccgatcgag cccgccatct gggagaggtt cagcatcgag
      241 ccacgagcgc cggatcgggc catgatcacc gcgctgttct cgattccgag gtgcttgccc
      301 gcgatctggc cggcctggtc tcgcgcgcgg ccgaggatct tcatcgcttc gacctccagc
      361 gtctcctcga gggaccgccc gggcatctgc tcgagttcgc cccgcttgta cgactccacg
      421 aggtcctcga ccttctcgat cgcggtcttg aggacgtccg tgatctgctt cttcgcctcc
      481 tccgggatgt cctcgtcgtc gattccggtc gtgaagccgc ggatcatgat cgcaccaatc
      541 gccatcttcg tggctcggtc gatgaactcc cgcgcggcat ccgggccgta gtcccgcgcc
      601 aacttgtcta cgatcttgcc cttgaaggcg ccgatcgcgt tctcgtcgat cgtgccggac
      661 gcgatgacgc cgttcttgat cacgacgagc gagtcttcat ccttcagctc cttcaagccg
      721 atgtcgcctt tcggcgcgat cgaggacttg aacgtcatgc tcaggttctt cggcaggatt
      781 gcggagaaca gcgccttccc ggaccagaac tccttgccgc cccgcttgat gtccggcggc
      841 ggaatgtccc gcatgtcgat cttggtcagg atgaacgtga cctcctcccg cgtgaacttg
      901 ctctccttgt gcgtcaggag gaacgagccc gagatgtgat cgtggatgcc gccgatgacc
      961 gggccgccga accgtgggga gaggatgtgc tcctgcaccc gcatgaggac gcgggcctcg
     1021 gcgcgcgctt cctcgctctg caggacgtgc aggttcatct cgtcgccatc gaagtccgcg
     1081 ttgtacggcg gacacacggc gaggttgaac cggaacgtct tgtggggcat gacgcggacc
     1141 tcgtgcgcca tcatggacat gcggtgcaga gagggctgcc gattgaacag cacgatgtcg
     1201 ccgtccacga gctgccgttc gacggtgtat ccgatctcga cggcttccgc gacgacttcg
     1261 gcgttcttct cggtcactcg gatccgccgg ccgtccgggc ggatgacgta attcacgccg
     1321 ggcgcatact ctcccagggg gccgagtggc gtcggaccgc gcttcaccca ccccttgacg
     1381 atgtccaggt tgtacgcctg gacgtggacc gggaccgtca gctcgcgggc cgcctcgacc
     1441 gggacaccga cctcgttgat cgacaggatt ggatccggag agattacagt gcgggccgag
     1501 aagttcaccc gcttgccgga caggttcgaa cggaagcggc cttcctttcc tttcaaccgc
     1561 tgcacgagcg tcttcagcgg gcgaccggac cggtgcctcg caggcgggat gcccgacgtc
     1621 tggttgtcga agtacgtcgt cacgtgatat tgcaggagtt cccacaggtc ctccacgatc
     1681 agctggggcg cacccgcgtc ccggttctcg cgcaggcgct ggttgatccg caggacgtcg
     1741 acgagcttgt gcgtgaggtc gtcctccgag cggtcgccgc tctcgagggt gatcgacgga
     1801 cgcacggtga cgggcgggac gagcaacgcg gtcaggacca tccactcggg ccgggcg
//
LOCUS       DATLMA010000080         2072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_249329, whole genome shotgun sequence.
ACCESSION   DATLMA010000080 DATLMA010000000
VERSION     DATLMA010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249329"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VNA10_01005"
     CDS             complement(<1..575)
                     /locus_tag="VNA10_01005"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylation factor-like protein"
                     /protein_id="HVG36286.1"
                     /translation="MERELDEIRAMSDFVVEFQSSLRGGIIRNSMRISQMESNGIRTN
                     WIPYTFKDLVGLTVYFPRILVTGPFNAGKSTVVKALAEKSISIDRMGTTVAFDYGNVN
                     ITGIEAEIFGTPGQERFEFIFKIFAREVSGVLLVVDASHPDELARARQMLDLVGPRIP
                     YVILANKSDLPGAIPPEEIAHRMGLPDDVPVV"
     gene            complement(663..1109)
                     /locus_tag="VNA10_01010"
     CDS             complement(663..1109)
                     /locus_tag="VNA10_01010"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAD55 family ATPase"
                     /protein_id="HVG36287.1"
                     /translation="MMQSPPKAIAPRAKTGIPVLDERLQGGFPRPSTLLLFSEKPTEK
                     RLFGENFAIQGAKAGETCLYVDFFRAPQLARGELKRFGAVDPTKLVLVDATSSQLLLP
                     SREKYHIDDIDNLANIREAIIAAMTAERPGRIVVDSMEFLMDRFPK"
     gene            complement(1106..1771)
                     /locus_tag="VNA10_01015"
     CDS             complement(1106..1771)
                     /locus_tag="VNA10_01015"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAD55 family ATPase"
                     /protein_id="HVG36288.1"
                     /translation="MEDRFPTNYSILLTGPPGVGKFEYLVDRIRDDLRRGERVVFVTL
                     DLHPSEIRARAKALHLDLDAVEGKSFVFVDCYSATSSERPPETTAGKKTFLVSSFSNL
                     EGIGMAMSKASQEIGTPVRIYFYTISTLFLHNSPQAIAKFFQIVTSRAKTNLGFILYA
                     VQEGVHEPMTMNLLRSLVDGVVEMRFTEGMDHEVRVHHMRGYQVDASWHPFAQLPEAV
                     VAR"
BASE COUNT          379 a          631 c          670 g          392 t
ORIGIN      
        1 accaccggca catcgtcggg caggcccatg cggtgcgcga tctcctccgg aggaatcgca
       61 cccgggaggt cgctcttgtt cgcgaggatc acgtacggaa tccgcggacc cacgaggtcg
      121 agcatctgcc gggctctcgc gagctcgtcc ggatggcttg cgtcgacgac cagcaggacg
      181 ccgctcacct cgcgcgcgaa gatcttgaag atgaactcga accgctcctg gcccggggtg
      241 ccgaagatct cggcctcgat cccggtgatg ttgacgttcc cgtagtcgaa ggcgaccgtg
      301 gtgcccatcc ggtcgatgct gatcgacttc tccgcgaggg ccttgacgac cgtcgacttc
      361 cccgcgttga acgggccggt gaccaggatc cgcgggaagt acaccgtcag cccgacgagg
      421 tccttgaacg tgtacgggat ccagttcgtc cgaattccgt tcgactccat ctgcgagatc
      481 cgcatcgaat tgcggatgat cccgccccgg agggaggatt ggaactccac gacgaagtcg
      541 gacatcgccc ggatctcatc gagttcgcgc tccatcaggg tccagttgat gaacaggaaa
      601 cagatgacgg tcccggcgga gcgggcggcc tcaatcagtt cccgccagag tcgaaggacg
      661 tcttacttgg gaaaccggtc catgaggaac tccatcgagt cgacgacgat gcgaccgggg
      721 cgctcggccg tcatcgcggc gatgatcgct tcacggatgt tcgcgaggtt gtcgatgtcg
      781 tcgatgtggt atttctcgcg gctcgggagg aggagctgag acgaggtcgc gtcgacgagg
      841 acgagcttcg tcgggtcgac ggccccgaaa cgtttcaatt cgccccgggc gagttgtggg
      901 gcgcggaaga aatccacgta caggcaggtc tcgccggcct tcgcgccttg aatcgcgaag
      961 ttctcgccga agaggcgctt ctccgtcggc ttctcgctga acaacaagag ggtcgaagga
     1021 cgtgggaaac ctccctggag acgttcgtcg aggaccggga ttccggtctt cgctcgcggg
     1081 gcgatcgcct tcggcggaga ctgcatcatc gcgcgaccac cgcctccggg agctgggcga
     1141 acggatgcca cgatgcgtcg acttggtacc cgcgcatgtg gtggacccgg acctcgtggt
     1201 ccatgccctc cgtgaagcgc atctcgacga cgccgtccac gagggaccgc aggaggttca
     1261 tcgtcatcgg ctcgtgcacg ccctcctgga ccgcgtacag gatgaagccg aggttcgtct
     1321 tcgctcgcga cgtgacgatc tggaagaact ttgcgatcgc ttggggcgag ttgtgcagga
     1381 agagcgtcga tattgtgtag aagtagatgc ggacgggcgt cccaatctcc tggctcgcct
     1441 tgctcatcgc catcccgatt ccttcgaggt tgctgaagct cgagacgagg aacgtcttct
     1501 ttccggcggt cgtctccggc ggtctctccg acgacgtcgc gctgtagcag tcgacgaaca
     1561 cgaacgactt gccctcgacc gcatccaggt cgaggtgcaa cgccttcgcc cgcgctcgga
     1621 tctcgctcgg atggagatcc aacgtcacga agacgacgcg ctcgccgcga cgcaggtcgt
     1681 ctcggatccg gtccacgagg tactcgaatt ttccgacgcc gggcgggccg gtgaggagga
     1741 tcgaatagtt cgtcggaaag cggtcctcca atcaggtcac ctcggtcggg gctttcgctc
     1801 gtgcgctcga aggcgtcggc tgattcaccg gagtcttcga tgttccgttt tgtcatatat
     1861 aggacgtgcc gtagttctca aggctgagaa atcccgtcat cgggagagaa tcggacccgg
     1921 cgcgcgacaa aaacatataa cgcgagggtc ccatgcgccg cgggatgcct cccggcgcgg
     1981 tggagttgag ctatctcgag aagaaagtcc tccttgcgct ggtcaaactc gaaaaggccg
     2041 cgcccgagga gattcgagcc gcgggcaagt tc
//
LOCUS       DATLMA010000081         2505 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_249410, whole genome shotgun sequence.
ACCESSION   DATLMA010000081 DATLMA010000000
VERSION     DATLMA010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249410"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1085)
                     /locus_tag="VNA10_01020"
     CDS             complement(<1..1085)
                     /locus_tag="VNA10_01020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG36289.1"
                     /translation="MASIVSFRAGPSVFKDQGKLSFDYLPEKLIHREGQTQRLFSLLR
                     PIVEAGASSNAFLYGPVGTGKTHTAKRFCLDFKKYASESDRAVDWDVVNCRQRMGDDA
                     VLLRLIQHFDAHFPERGFSIAEKMETLRRHLEKHRLHFIVILDEVDALLKKSGADLIY
                     SFARIAEETVASKGNISMILISQRSNALEYMDRAALSTFRRSNVVEFPKYDRAELRDI
                     VSGRVQLAMHPGTVDEDLLDLIADIASEFGDARYAIELLEKAGMLADEENLEEVAPEH
                     VRGAKAHVHPTDVQERLGLLDVPKKLVLLAIARKSRKKAYITMGAAEESYAVVCEEYD
                     EKPRAHTQFWKYVRDLDALGLLDTKLSG"
     gene            1138..1521
                     /locus_tag="VNA10_01025"
     CDS             1138..1521
                     /locus_tag="VNA10_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36290.1"
                     /translation="MRGWRDVEERFFCFACGRDHRTGTAIARDHKRYSIEGGHESGGI
                     FSDLREFYLQTKGIDAAFRIRGFEDVRVHPPRFGRGWPSRAAIEGAYRERVRRHHPDA
                     GGDAREFRKLQWAIEVLRRYRPPDP"
     gene            1612..>2505
                     /locus_tag="VNA10_01030"
     CDS             1612..>2505
                     /locus_tag="VNA10_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36291.1"
                     /translation="MPDKVLHDLADAHGLDPARYPNRSSLIEALASLPDAELLLTEAE
                     RRRMEFRLERLRPRQLRELGERHRVSLLGLKRKSELIAALAGAPGSPEILMELEAHDT
                     AERDAGPALGRDTDIDYERVEELLDQARKRFQERQFEAALTAAQEASRIAERTTEQLR
                     RASWSYAVLAAQGLLEPCNPEDPETAKARALLDRARDVFFQGQLMDDAFLQDLVRAAE
                     VAHAREAERVRDLLAITRDSIREAANLGASIALAEDAWKRGGDDLDRDRLAAARESFV
                     EAGQRAEDARLRRIREVEESVG"
BASE COUNT          437 a          819 c          817 g          432 t
ORIGIN      
        1 ccgctcaact tcgtgtcgag gaggccgagc gcgtcgaggt cgcgcacata cttccagaac
       61 tgggtatggg cccgcggctt ctcgtcgtac tcttcgcaca ccacggcata cgactcctcg
      121 gctgcgccca tcgtgatgta cgctttcttg cggctcttcc gcgcgatggc taggagcacg
      181 agtttctttg ggacgtccag gagcccgagg cgctcttgga catccgtcgg atggacgtgc
      241 gctttcgcgc cgcgcacatg ctccggtgcg acttcctcga ggttctcctc atccgcgagc
      301 atgccggcct tctcgagcag ctcgatggca tatcgtgcat cgccgaactc ggacgcgata
      361 tccgcgatca ggtcgaggag gtcctcgtcg acggttcccg gatgcatcgc gagctgaaca
      421 cggcccgaga cgatgtctcg gagctccgcg cgatcgtact tggggaactc gacgacgttg
      481 gaccggcgga aggtactcag ggccgcgcgg tccatgtact ccaacgcgtt cgaccgctgc
      541 gaaatgagga tcatcgagat gttgcccttc gaggcgaccg tttcctccgc gatccgcgcg
      601 aacgagtaga tcaggtccgc gccgctcttc ttcagcaagg cgtccacttc gtccagaatc
      661 acgatgaaat ggagacggtg tttctcgagg tgccgccgca aggtctccat cttttccgcg
      721 atcgagaaac cgcgctccgg gaagtgcgcg tcgaagtgct ggatcaaccg gagcaggacc
      781 gcgtcgtcgc ccatccgctg gcggcagttg acgacgtccc agtcgaccgc gcggtccgat
      841 tcggacgcgt atttcttgaa atcgaggcag aagcgcttcg ccgtgtgcgt cttccccgtc
      901 cccaccgggc cgtacaggaa cgcgttgctc gaggctcccg cctccacgat cggccgcagt
      961 aggctgaaga gccgctgcgt ctggccctcg cggtggatca gcttttcggg caggtagtcg
     1021 aacgacagtt tcccctggtc cttgaacacc gagggcccgg cccggaacga cacaatcgac
     1081 gccaaggcgc ggtctgcgaa taacctttgc ctccgagacc cgaaaaccca tcaagcaatg
     1141 cgcggatggc gggacgtgga agagcggttc ttctgtttcg cgtgtggacg ggatcatcgg
     1201 acggggaccg caatcgcgcg ggaccacaag cgatacagca tcgaaggcgg ccacgaatcc
     1261 ggtgggattt tctccgactt gcgggaattc tacttgcaga cgaaagggat cgacgcggcc
     1321 ttccggatcc gcggcttcga ggacgtccgc gttcatccgc cgcgattcgg ccggggctgg
     1381 ccatcgcggg ctgcaatcga aggtgcgtac cgcgagcggg tccgccgcca ccatcccgac
     1441 gcaggcgggg atgcgcgcga attccggaag ctccagtggg cgatcgaggt cttgcgccgg
     1501 tatcggccgc cagatccctg accggacgtg cacaacgttt atcgcacccc ggacgttgat
     1561 tcgaacggag gtccaggaac gccctcatcg tcccgggaag ggctctccac gttgcccgac
     1621 aaggtcttgc acgacctggc cgatgcccat gggctcgatc ccgcgcggta tccgaatcgc
     1681 agctcgctca tcgaggcgct tgcttcgctc ccggacgccg aactcctcct gaccgaggcg
     1741 gaacgccgtc gaatggaatt ccgcctcgaa cggcttcgac cccgacagct ccgggaactc
     1801 ggggaacgac atcgcgtgag tctcctcggg ctgaaacgga agtcggaact catcgcggcc
     1861 ctcgcggggg ctcccggttc ccctgaaatc ctcatggaac tcgaagcgca cgacaccgcg
     1921 gagcgcgacg ccggacccgc tctgggccgg gacaccgaca tcgattatga acgggtcgag
     1981 gaacttctcg accaagcccg caagaggttc caagaacgcc agttcgaggc cgcgttaacc
     2041 gcggcccagg aggcgtcccg gatcgcggag cggaccacgg agcagctccg gcgggcgtcg
     2101 tggtcgtacg ccgtcctcgc ggcgcaggga ctcctcgaac cgtgcaaccc ggaagacccg
     2161 gaaactgcga aggcccgcgc gctgttggat cgggcgcgag acgtgttctt ccagggtcag
     2221 ctcatggacg acgcgttcct gcaggatctc gtccgggccg cggaggtggc tcacgcgcgg
     2281 gaagccgagc gcgtccggga tctgctcgcc atcacgcgag actccattcg cgaggccgcg
     2341 aacctcggcg catcgatcgc cctggcagag gatgcgtgga agcgcggggg cgacgatctc
     2401 gatcgcgacc gtctggccgc ggcgagggag agttttgtcg aggccggcca gcgggccgag
     2461 gacgcccggc tccgtcggat tcgcgaggtc gaggaatcgg tcggc
//
LOCUS       DATLMA010000082         2204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_309578, whole genome shotgun sequence.
ACCESSION   DATLMA010000082 DATLMA010000000
VERSION     DATLMA010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309578"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VNA10_01035"
     CDS             complement(<1..372)
                     /locus_tag="VNA10_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36292.1"
                     /translation="MGSARPAALAVITFLLVFWSVFTPAIGQNPAGHMVVTTDYELFG
                     TSDLNGGGHVTWTLTGAKAADLRAKILHLFDEYDQIPRGFPFEGAATSANRDGVLDAA
                     EGANYTDRVENVLEGSGGQGTL"
     gene            483..1226
                     /locus_tag="VNA10_01040"
     CDS             483..1226
                     /locus_tag="VNA10_01040"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG36293.1"
                     /translation="MVPQDLSKLLAGGVDLEQEFERATKTLESIGLSGYEARGYIALV
                     AHGYGSAETIAETARIPRTSAYKVLQSLCQKGFAISTRGRPTIFKPEAPSKVKGRVID
                     HLEDTFAKLDLLHEVLRSKGEPQLVYTIVTKVRVLEKIGELIDQSSETCIVSTPTFSE
                     IRENVGKKIEQAIARGIRFTIITEPGQKIPEGAGVVNRKGLIATDVIVDGSAALIAAP
                     DLSACGYTDNASLSRHLENFLEIIMNLKE"
     gene            1236..>2204
                     /locus_tag="VNA10_01045"
     CDS             1236..>2204
                     /locus_tag="VNA10_01045"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG36294.1"
                     /translation="MVSSARSFDVVVIGAGPAGGYLAGKVAAAGYDVALVEEHREIGE
                     PIQCGGLVTPRVFEYVDCKETIIGAVHGAELYSPSGRRFVIDGHHTQAVVVQRAMFDR
                     AIATDAVRKGAHTFLGAQAQTATREDGGIEISIDQDGEPRKLHAKLLVGCDGVRSNVA
                     KWFNILRPRKILPGFEVEMTGVRGDPGFVTLFIGNEIAPGFFGWIIPSGDTARVGLCV
                     GEGNAYAYLEKMLTRPEVRQYTKGAQPILYIAGGIPLGFPRRTYADNVLVVGDAACQA
                     KAVSGGGIFTALTCSNFAAQTAIEALEAHDLSGRMLHQYHRAWTKSI"
BASE COUNT          417 a          684 c          743 g          360 t
ORIGIN      
        1 gagcgttccc tgaccgccgg acccctcgag gacgttctcg acccggtccg tgtaatttgc
       61 gccctccgcg gcgtcgagaa cgccgtctcg gttggccgac gtggccgcac cctcgaaggg
      121 aaagccgcgc ggaatctgat cgtactcgtc gaacagatgc agaattttcg cacgcaggtc
      181 cgccgccttg gccccggtca gcgtccacgt tacgtggccg ccgccgttca gatcagaggt
      241 cccgaagagt tcgtagtcgg tcgtgacgac catgtggccg gccggattct ggccgatcgc
      301 cggagtgaaa acgctccaga agaccaagag gaaggttatc acagcgaggg cggctgggcg
      361 cgccgaaccc atgaccgcga aggaaggctc ccgtcggata aaggcttgcg tcgcgtttcg
      421 atatccaaca ctgagccggc cgattcgaaa agataaaaac cgccctcggg tatcgtggcc
      481 gcgtggttcc gcaagatttg tcgaagctgc tcgcgggcgg cgtcgacctc gagcaggaat
      541 tcgagcgggc cacgaagacg ctcgagtcga tcggcctctc cgggtacgag gcccgcggct
      601 acatcgcgct cgtggcccac ggatacggga gcgcggagac gatcgccgag accgcgcgga
      661 tcccccggac gtccgcgtac aaggtcctgc agagcctctg ccagaaaggt ttcgcgatct
      721 cgacccgcgg gcggccgacg atcttcaagc cggaggcgcc gagcaaggtc aagggacgcg
      781 tgatcgacca cctcgaggac acgttcgcga agctcgatct tctccatgag gtcctgcgtt
      841 cgaaagggga gccgcagctc gtctacacga tcgtcacgaa ggtgcgcgtc ctggagaaga
      901 tcggcgagct gatcgaccag tcgtcggaga cgtgcatcgt ctccacgccg acgttctccg
      961 agatccgcga gaacgtgggg aagaagatcg agcaggcgat cgcccgcggc atccggttca
     1021 cgatcatcac agagccaggt cagaagatcc cggagggggc gggcgtcgtg aaccgcaaag
     1081 gcctcatcgc gacggacgtc atcgtggacg gttccgcggc gttgatcgcg gcgcccgacc
     1141 tgtccgcgtg cggctacacg gacaacgcct cgctgtcgcg gcatctggag aacttcctcg
     1201 aaatcatcat gaacctgaag gagtgatgcc ggaacgtggt cagttcggcg cgctcctttg
     1261 atgtcgtcgt gatcggagcg ggccccgcgg gcggctacct ggcggggaag gtcgcggcgg
     1321 ccggatacga cgtcgccctg gtcgaggagc atcgcgagat cggggagccg attcagtgcg
     1381 gcggcctcgt cacgccgcgg gtcttcgagt acgtcgactg caaggagacg atcatcggtg
     1441 cggtccacgg ggccgagcta tactcgcctt ccggccgacg gttcgtgatc gacggtcacc
     1501 acacgcaggc ggtggtcgtg caacgcgcga tgttcgaccg ggcaatcgcg acggatgcgg
     1561 ttcggaaggg cgcgcacacg ttccttggtg cacaggctca aaccgcaacg cgggaggatg
     1621 gcggcatcga aatctcgatc gaccaggacg gggagccacg gaaactgcac gccaaactgc
     1681 tcgtcggctg cgacggcgtc cgctcgaacg tcgccaagtg gttcaacatc ctgcgtccga
     1741 ggaagatcct tcccggcttc gaggtggaga tgaccggcgt ccgaggagat ccgggattcg
     1801 tcacgttgtt catcgggaac gagatcgcgc ctggattctt cggatggatc atcccgagcg
     1861 gcgatacggc gcgggtaggc ctgtgcgtcg gcgaagggaa cgcgtacgcc tacctggaaa
     1921 agatgctgac tcgacccgag gtgaggcagt acacgaaagg cgcccagccg atcctctaca
     1981 tcgccggggg catcccgctc ggattccccc gccggaccta cgcggacaac gtgctggtcg
     2041 tcggggacgc ggcgtgccaa gcgaaagccg tctccggagg gggaatcttc accgcgctga
     2101 cgtgctcgaa tttcgcggcg cagaccgcga tcgaggcgtt ggaggctcac gacctctccg
     2161 gtcgcatgct ccatcagtac catcgggcgt ggacgaaatc gatc
//
LOCUS       DATLMA010000083         1158 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_732455, whole genome shotgun sequence.
ACCESSION   DATLMA010000083 DATLMA010000000
VERSION     DATLMA010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_732455"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VNA10_01050"
     CDS             complement(<1..209)
                     /locus_tag="VNA10_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36295.1"
                     /translation="MHSTEWGRKTHHEPAPKTGLRAQFARGFHLTLGSLRVLATEPRM
                     MALPFLALVFTGFIWLIVVLSVIALG"
     gene            complement(249..926)
                     /locus_tag="VNA10_01055"
     CDS             complement(249..926)
                     /locus_tag="VNA10_01055"
                     /inference="COORDINATES: protein motif:HMM:NF014752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ERCC4 domain-containing protein"
                     /protein_id="HVG36296.1"
                     /translation="MRIPLVVDSNEPEDIPERLRELGVDIEVQKIAPGDYVLGPVGIE
                     RKTLYDFFNSMVRKRLFEQVRRLRDAYPQPLVILEGDLAEISTFRSPQAILAALLVLE
                     TTERVPVLTTADKEQTALVLSILWKRQGKGAVEYGLRHKPKAMSLEQRQRFLVEGLPN
                     IGETLSRSLLERFGSVRAVFSASEEELRKVPKIGGIKAADIVRLSNAPYEGDQKHIED
                     DPADPDV"
BASE COUNT          205 a          375 c          369 g          209 t
ORIGIN      
        1 ccgagagcga tgacgctgag cacgacgatg agccatatga agccggtgaa gacgagggcc
       61 agaaacggca gggccatcat ccgcggctcc gtcgccagga cgcgcagact tccgagggtc
      121 aggtggaatc cgcgggcgaa ctgcgcacgc aatcccgttt tcggtgcagg ctcgtgatga
      181 gtcttccgac cccactccgt cgagtgcatc ccgcgcgcaa aacgagggga gcggtcataa
      241 gtttattgtc aaacgtcggg gtcggcgggg tcgtcctcga tatgtttctg gtctccctcg
      301 tacggcgcgt tcgagagacg cacgatgtcc gcggccttga tacctccgat cttcggcacc
      361 ttcctgagct cctcctccga cgcggagaac acggcacgga cggacccgaa gcgctcgagg
      421 aggctcctcg agagcgtttc gccgatattc ggcagtccct cgacgaggaa acgctgccgc
      481 tgctcgagcg acatcgcctt cggcttgtgc cgcaggccgt actcgacggc ccccttgccc
      541 tgacgcttcc agaggatgct cagtacgagg gcggtctgtt ccttgtccgc ggtcgtcagg
      601 acggggaccc gctcggtcgt ctcgaggacg aggagcgccg ccaagatcgc ctgcgggctt
      661 cggaacgtcg agatctccgc gaggtcccct tcgaggatca cgagcggctg cgggtacgcg
      721 tcccggagac gccggacctg ttcgaagaga cgcttgcgga ccatcgagtt gaagaaatcg
      781 tacagcgtct ttcgctcgat cccgacgggc cccaggacat agtctcccgg cgcgatcttc
      841 tgcacctcga tgtcgacacc gagttcgcgg agccgctcgg gaatgtcctc gggctcattc
      901 gaatcgacga cgagcgggat gcgcacgccg tgtcgaatcg ccccagcgac gtaaacgttc
      961 cggtgacggc cgcaaatcag cggcgttagg gaaatcgcat cggctcatcc ttttgaaggt
     1021 cgcgcgcgtg ccgccgacga tggctcggcg gcggacgctc aatctcctcg tcgccacaat
     1081 gctcggcacg atggattcga acgcgctcgt accggtcatc gcgctctacg cccagcatgt
     1141 cggggcggat ctcctgac
//
LOCUS       DATLMA010000084         1054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_553000, whole genome shotgun sequence.
ACCESSION   DATLMA010000084 DATLMA010000000
VERSION     DATLMA010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_553000"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1041)
                     /locus_tag="VNA10_01060"
     CDS             complement(<1..1041)
                     /locus_tag="VNA10_01060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S41"
                     /protein_id="HVG36297.1"
                     /translation="MRNLTNTTAAHERSPVWSPDGRSIACFSDASGEYQLEVRSQDGK
                     GGPRTYKLPGAGFYERPAWSPDSKKIVYVDNARALYVIDLATGVSKKVGGDYFYGPRK
                     TLRPAWSADSKWIAYSVNNQAYMQRVWVYSVEKDQAFPVTDGLSDASEPVFDRSGKYL
                     FFFASTDAGPVTNWFSLENQDLRVTRSIYLAVLRKDLASPLVKESDEEKAGASSSESP
                     DKPKRAAEEEGKDAKKEEPGKTDAKSDEKPKPPAPAEPVRIDFDGLNARILDLPVPAA
                     DLSELYPGPAGQIFFLRDAEEKKALQRFDLKDRKTETLLPEVNDYEISADGKKLLYRS
                     KENWAIVSASAKK"
BASE COUNT          148 a          324 c          376 g          206 t
ORIGIN      
        1 cttcttggcg gaggcggaga cgatcgccca gttttccttg gagcggtaga ggagcttctt
       61 gccgtcggcg gagatctcgt agtcgttgac ttcgggaagg agcgtctcgg tcttccggtc
      121 cttcaggtcg aagcgctgga gggccttctt ctcctcggcg tcgcgcagga agaagatctg
      181 gccggccggg ccggggtaca gctccgagag atcagcggcg gggacgggca aatcgaggat
      241 gcgcgcattc aggccgtcga agtcgatccg gacgggctcg gccggggccg gcggcttggg
      301 cttctcgtcg gacttcgcgt cggtcttgcc gggctcttcc ttcttcgcgt ccttgccctc
      361 ttcctcggcg gcgcgtttgg gcttgtcggg ggattccgac gaggacgccc cggccttctc
      421 ctcgtcgctc tccttgacga gcggcgaagc gaggtccttt ctcagcacgg cgagatagat
      481 cgagcgcgtc acgcgcaggt cctggttctc gagcgagaac cagttggtga ccgggccggc
      541 gtccgtcgag gcgaagaaga agaggtactt gccgctcctg tcgaacacgg gctcggaggc
      601 gtcggagagg ccgtcggtga cgggaaaggc ctggtccttc tcgaccgaat agacccagac
      661 gcgttgcatg taggcctggt tgttgacgga gtaggcgatc cacttggagt ccgccgacca
      721 cgcggggcgc agcgtcttgc gcggcccgta gaagtagtcc ccgccgactt tcttcgagac
      781 ccccgtcgcg aggtcgatga cgtagagggc gcgtgcgttg tccacgtaga cgatcttctt
      841 gctgtcgggc gaccaggcag gccgctcgta gaagcccgcg cccggcagct tgtaggtcct
      901 gggccccccc ttgccgtcct gcgagcgcac ctcgagctgg tattcgcccg aggcgtcgga
      961 gaaacacgcg atggagcggc cgtccggcga ccagacgggc gagcgctcgt gcgcggccgt
     1021 ggtgttggtc aggttgcgca cgtcgccctt ttcc
//
LOCUS       DATLMA010000085         1564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_852143, whole genome shotgun sequence.
ACCESSION   DATLMA010000085 DATLMA010000000
VERSION     DATLMA010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852143"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1015)
                     /locus_tag="VNA10_01065"
     CDS             complement(26..1015)
                     /locus_tag="VNA10_01065"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HVG36298.1"
                     /translation="MAAPMRVGVIGVGSMGQNHARVYSEIADLVGIADPDVKAGGAVS
                     NRFNVSYYTDAAHLLKEDLDAVSVCVPTEHHAKVALAAVKAGVSLLVEKPLAATVPDA
                     SQIVDAAKRADVTLAVGHIERHNPAIAVVKRYLQEGQYGDLVTATARRVSSFPGRVRD
                     IGVVMDLGVHEIDILRYLVGAPVESVFALGGRKIHSAFEDHANILLRFQNGVDGFVEV
                     NWLTPMKVRKLALTCLKNFVEVDYTEQSVTVSSSTLGPLDPFNLYQIPLEHHTQKIHV
                     RKEEPLKKELEDFLDAVKEKRPPLVPGEDALETLKVAVAATESHRTGKLVQLR"
     gene            1119..1298
                     /locus_tag="VNA10_01070"
     CDS             1119..1298
                     /locus_tag="VNA10_01070"
                     /inference="COORDINATES: protein motif:HMM:NF016811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HVG36299.1"
                     /translation="MAVDPVCEKPVNPHNAYCMIWYKGTPYYFDSEECQLKFDHKPEH
                     YRQLALDRRQNESIY"
     gene            complement(1318..>1564)
                     /locus_tag="VNA10_01075"
     CDS             complement(1318..>1564)
                     /locus_tag="VNA10_01075"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HVG36300.1"
                     /translation="SFLFELSFIALTGIAMGVALGVALSYDLYLRFFANQAAFVIPWD
                     RLLLLGGIAFIGAVLATASPAIRASRIPPAEALRSFE"
BASE COUNT          293 a          486 c          504 g          281 t
ORIGIN      
        1 gggaaagggc aattctgatc gcagttcacc ggagctggac gagcttcccg gtgcggtggg
       61 actccgtcgc ggcgaccgcg accttcagcg tctcgagcgc gtcctcgccc gggacgaggg
      121 gtggcctctt ctccttgacg gcgtcgagaa aatcttcgag ctctttcttc aacggctcct
      181 ctttgcggac gtgaatcttc tgcgtgtggt gctccagcgg gatctggtag aggttgaacg
      241 ggtccaacgg gccgagggtg ctcgagctga cggtgaccga ttgctccgtg taatcgacct
      301 cgacgaagtt cttgaggcag gtcagggcga gcttccgcac cttcatcggg gtgagccagt
      361 tcacctcgac gaagccgtcg actccgtttt gaaatcgcaa caggatgttc gcgtggtctt
      421 cgaacgccga atggattttc cgtcctccga gcgcgaagac gctttccacc ggtgcgccga
      481 cgaggtagcg gaggatgtcg atctcgtgga cgccgagatc catgacgacc ccgatgtccc
      541 ggacgcggcc cgggaaggaa ctcacgcggc gcgccgtcgc ggtcacaagg tctccgtact
      601 gcccttcctg cagataccgc ttcacgaccg cgatcgcggg attgtgtcgc tcgatatggc
      661 cgacggccag ggtcacatcc gcgcgcttcg cagcgtcgac gatttgcgat gcgtcgggga
      721 ccgtcgcggc gagcggcttc tcgaccagga gagagacgcc ggccttgacc gccgcgaggg
      781 ccaccttcgc gtggtgttcc gtgggcacgc agacgctcac ggcgtcgaga tcctctttca
      841 gcaaatgcgc ggcgtccgtg tagtatgaga cattgaagcg attcgaaacc gcgccgcccg
      901 ctttcacatc cggatccgcg attccgacga ggtcggcgat ctcggaatac acgcgggcat
      961 ggttctggcc catcgagccg accccgatga ccccgacgcg catcggcgcc gccacaaggc
     1021 ctcgaaagag ggctcgggat ataaacgcgc ggcggacccg tggcactgtc gaaggcttca
     1081 tattcgttcg tgccttcggt cgcgcggtcc gtgttccgat ggccgtcgat ccggtgtgcg
     1141 agaagcccgt gaacccgcac aacgcgtact gcatgatctg gtacaagggg accccgtact
     1201 acttcgacag cgaggaatgc cagctcaagt tcgaccacaa gccggagcac tatcggcaac
     1261 tcgcgctcga tcgacgtcag aatgaatcca tctactgact tgtcgtcgtg cggcgcgtca
     1321 ctcgaagctt cgcaacgcct ctgccggagg aatgcgggag gcgcggatgg ccgggctcgc
     1381 ggtcgcgagg accgctccga tgaacgcgat gccgcccagg agcaacagcc ggtcccaggg
     1441 gatcacgaag gcggcctgat tcgcgaagaa ccgaagatac aggtcgtatg acagcgcgac
     1501 gccgagggcg acgcccatcg cgattccagt cagcgcgata aacgaaagct cgaagaggaa
     1561 cgac
//
LOCUS       DATLMA010000086         1175 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_188824, whole genome shotgun sequence.
ACCESSION   DATLMA010000086 DATLMA010000000
VERSION     DATLMA010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188824"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1175
                     /locus_tag="VNA10_01080"
     CDS             <1..>1175
                     /locus_tag="VNA10_01080"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177373.1"
                     /note="unique DNA polymerase that is similar to eukaryotic
                     polymerases; forms a heterodimer of the small and large
                     subunits; possesses polymerization and 3' to 5'
                     exonuclease activities; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HVG36301.1"
                     /translation="DREELAILVAKEMAVRPATSKEKAVERAVRVGLAILTEGILVAP
                     LEGLAGVKIKRNRDGTSYVDLSYAGPIRSAGGTGQALSVLIADIVRRELGLGRYVPTR
                     EEVERFKEEIPLYRQAQHLQYTPSDEEISLIVSNCPVAIDGEGTEDAEISGHRDLPRI
                     ETNRIRGGACLVIADGMCLKAPKIQKHVKKLRIDGWEFIDEYLAQKESRPEDTKDELG
                     VEPSEVFIQNIVAGRPVLCHPSRPGGLRLRYGRTRATGLAALALHPATMHILDDFIAV
                     GTQIKTERPGKAGAVTPCDRIEGPLVVLDSGDFVEVADADAAKRLTPRVRVIADLGEI
                     LVPFGEFLENNHVLMPGAFSLEWYGALLREKLGGLPDGWEGVDGPQAIAWSRDLGIP"
BASE COUNT          211 a          376 c          408 g          180 t
ORIGIN      
        1 acgatcgcga ggagctcgcg attctcgtgg cgaaggagat ggcggtgcga ccggcgacga
       61 gcaaggagaa ggcagtcgag cgggccgttc gggtcggcct cgccatcctg acggaaggga
      121 tcctcgttgc gccgctcgaa ggcctcgccg gcgtcaagat caagcgcaac cgggacggca
      181 catcgtacgt cgacctgtcg tacgccggtc cgatccgctc cgcgggcggg acagggcagg
      241 ccctgagcgt cctcatcgcc gacatcgtac ggcgggagct cggcctcgga cgttacgtgc
      301 cgacgcgaga ggaggtcgag cgtttcaagg aggaaatccc gctgtaccgc caggcgcagc
      361 acctccagta cacgccgtcc gacgaggaga tctcgctcat cgtgtcgaac tgtcccgtcg
      421 cgatcgacgg ggaaggcacc gaggacgcgg agatcagcgg gcatcgcgac ctccctcgga
      481 tcgagacgaa ccggatccgt gggggcgcgt gcctcgtcat cgcggacggg atgtgcctga
      541 aggcgccgaa gatccagaag cacgtgaaga aactccggat cgacggatgg gagttcatcg
      601 acgaatacct cgcgcagaag gagtcgcggc ccgaggacac gaaagacgaa ttgggtgtcg
      661 aaccgagtga ggtgttcatc cagaacatcg tcgcgggccg tccggtcctg tgtcatccga
      721 gtcggcccgg cggcctgcgg ctccgatatg gtcggacgcg ggccaccggt ctcgccgccc
      781 tcgccctgca tcccgcgacg atgcacatcc tggacgactt catcgcggtc ggaacgcaga
      841 ttaagacgga acgcccgggg aaagccggcg ccgtcacgcc gtgcgaccgg atcgagggac
      901 ctctcgtcgt ccttgactcg ggcgatttcg tcgaggtcgc ggacgcggac gccgcgaaac
      961 gtctcacccc gcgcgtccgg gtcatcgcgg acctgggcga gatccttgtg ccctttggcg
     1021 agttcctgga gaacaaccac gtcttgatgc ccggggcatt ctccctcgag tggtacggcg
     1081 cactcctgcg cgagaagctc ggcggccttc cggacggatg ggagggcgtc gatggacccc
     1141 aggcaatcgc gtggtctcgg gacctcggca tcccg
//
LOCUS       DATLMA010000087         1191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_309881, whole genome shotgun sequence.
ACCESSION   DATLMA010000087 DATLMA010000000
VERSION     DATLMA010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309881"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            311..436
                     /locus_tag="VNA10_01085"
     CDS             311..436
                     /locus_tag="VNA10_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36302.1"
                     /translation="MALTLEIRLDNYCYELRYQLMAIIHVGSAQYPMEPPSIVVC"
     gene            538..>1191
                     /locus_tag="VNA10_01090"
     CDS             538..>1191
                     /locus_tag="VNA10_01090"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HVG36303.1"
                     /translation="MVSVAEILKGRHTGKAVELRGWIYRTRSVGGKAFVVVRDATGIV
                     QVALSRDSVPAEAFAAAEKALIESAVVVHGKVVEDKRAPGGFEIRADDFKVVHFAEKF
                     PIQEDLSEEFLLDVRHLWVRSQRMTTIFRIRHTTFGAVHEYFRDHGFWEVHPPMITPS
                     GSEGGSTLFELDYFGRKAHLTQSWQLYAEALVLAMEKIYYIGPSFRAEKSRTTRHLTE
                     "
BASE COUNT          244 a          379 c          347 g          221 t
ORIGIN      
        1 gatgtactac cgcgtcgcag tgcaaatcaa cggcacgagc ccggtgatgc tacatctacc
       61 ggtaccgggg gatcctcgtt tctggaacgc gctaagcgcg actgtcggca catcctcact
      121 gcgtgtgaac cactcgctga ccgatacgta cgcgctactt tacgccaccg gaaacgtgac
      181 ctttgagatc cactcaagtt tcacgccctc gccttcaaac caaagcgttt cgcgcgtccc
      241 ccaaatcggt gactcttatc aggattggaa cgcgagcatc gacatgagta gtgctgaccc
      301 gagaaccacc gtggcgctca cgttggagat tcgcttggac aactattgct acgagctccg
      361 ttaccagctc atggcgatca tccacgttgg ctccgcacaa tacccaatgg aaccaccgag
      421 catcgtagtc tgctaacctc acgatgggcc ggcagaggac ggatgtcctc aaacgtcaga
      481 cccaggcccg acactgcgca agtgtaatct agacccaccc aaatagggcg ggagttcatg
      541 gtctccgtcg cggaaatcct gaagggacgc cataccggca aggcggtcga gctgcgaggc
      601 tggatctacc gaacccggtc ggtcggtggc aaggcgttcg tcgtggtccg cgacgcgacc
      661 ggcattgtcc aggtggccct ctcccgcgat tccgtgccgg cggaagcatt cgcggcggcc
      721 gagaaggcgc tcatcgaatc cgccgtggtc gtgcatggca aagtggtcga ggacaaacgc
      781 gccccgggcg gcttcgaaat ccgcgcggac gacttcaagg tggtccactt cgccgagaag
      841 ttcccgattc aggaggacct gagcgaggag ttcctcctcg atgtccgcca cctctgggtg
      901 cgatcccagc ggatgacgac gatcttccgg atccgacaca cgacgttcgg cgcggtccac
      961 gagtacttcc gcgaccacgg tttctgggag gtccatccgc cgatgatcac gccctccggc
     1021 agcgaagggg gctcgacgct gttcgagctc gactacttcg gacggaaggc gcacctgacc
     1081 cagtcctggc agctctatgc ggaggctctc gtcctcgcga tggagaagat ctattacatc
     1141 gggccgtcgt tccgcgcgga gaagtcccgg accactcggc atctaacaga a
//
LOCUS       DATLMA010000088         1143 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_671573, whole genome shotgun sequence.
ACCESSION   DATLMA010000088 DATLMA010000000
VERSION     DATLMA010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_671573"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VNA10_01095"
     CDS             <1..429
                     /locus_tag="VNA10_01095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36304.1"
                     /translation="ASPVRRTAPSLPFGWGAVTVLLVGAALLILGILLILYGFLSFLM
                     GTIGQATSSSFSVMAFFQSFFGAIMLFVIGGVLAGIGGWLVRLWWIFLLVGVVTGAGN
                     VANTARGRAEQTSDVRVRCRNCGRLNPEFVQFCMACQQPV"
     gene            488..>1143
                     /locus_tag="VNA10_01100"
     CDS             488..>1143
                     /locus_tag="VNA10_01100"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HVG36305.1"
                     /translation="MGLVTRFAQQWVAGETMADAIRVAKEANARGLDALVNHLGEHYR
                     EKAPVESTKHEYLRLLATMQSEGIRGEVSIKPTQFGVLIDRAYALSEMIPILEATKAL
                     GRVLWLDMESAHTTDDAIWIGEQLLAQYDRVGICLQANLKRTANDLDRLLEAHARVRL
                     VKGAYQETPDTAYRTRSEIDRAYLAHLETLFTKGRNFAVASHDGRMIERALALAKAHP
                     T"
BASE COUNT          191 a          376 c          373 g          203 t
ORIGIN      
        1 gcgtcgcccg tccgacgaac cgctccaagc ctcccgttcg gctggggcgc cgtgacggtc
       61 ctcctggtcg gagcggctct cctgatcctc gggatcctgt tgatcctcta cgggttcctc
      121 agtttcctca tggggacgat cggccaagcg accagctcgt ccttctccgt gatggcgttc
      181 ttccagtcgt tcttcggcgc gatcatgctc ttcgtcatcg gaggcgtcct cgcgggcatc
      241 ggcgggtggc tggtccgcct ctggtggatc ttcctcctcg tcggtgtggt taccggggcc
      301 ggcaacgtgg ccaacacggc ccgcgggcgg gccgagcaaa cgtcggatgt ccgcgtgcgc
      361 tgccgcaact gcggccgcct gaacccggag ttcgtccagt tctgcatggc ctgccagcag
      421 cccgtgtgac cgttctcggc cgcggttcgg aacctatttg agcccgcggc ggagttcgcg
      481 cggaccgatg gggctcgtca cccggtttgc ccagcaatgg gtcgcagggg agacgatggc
      541 cgacgcgatc cgagtggcga aagaggcgaa cgctcgcggg ctcgacgcgc tcgtgaacca
      601 cctcggcgag cactaccgcg agaaagcacc cgtcgagtcg acgaagcacg aatatctgcg
      661 tttgctcgcg acgatgcaat ccgaggggat ccgcggcgag gtgagcatca agccgaccca
      721 gttcggagtg ttgatcgatc gagcctacgc gctctccgag atgatcccga tcctggaggc
      781 gaccaaggcg ctggggcgcg tcctctggct tgatatggaa agcgcgcaca cgacggacga
      841 cgcgatctgg atcggtgagc agctcctcgc ccagtacgac cgcgtcggaa tctgccttca
      901 agcgaacctg aagaggacgg ccaatgactt ggaccgactc ctcgaggcgc acgcgcgcgt
      961 ccgtctcgtg aaaggcgcgt accaggagac gccggacacc gcctaccgga cgcggtcgga
     1021 aatcgaccgc gcatacctcg cgcacctcga gacgctcttc acgaaaggcc ggaattttgc
     1081 ggtggccagc cacgacggtc gaatgattga acgagccctt gccttggcga aggcgcatcc
     1141 cac
//
LOCUS       DATLMA010000089         1116 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_188995, whole genome shotgun sequence.
ACCESSION   DATLMA010000089 DATLMA010000000
VERSION     DATLMA010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188995"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..684)
                     /locus_tag="VNA10_01105"
     CDS             complement(<1..684)
                     /locus_tag="VNA10_01105"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HVG36306.1"
                     /translation="MTVALWIVPTLALAGFLLCLLVGTRLGKGFVSAVGVGSIGLATL
                     AAWTRLVPFLREGGAPVVERLAPWIAAGNFSVDLSFRLDPLSALMVSFVTFVGFLIHV
                     YSIGYMKHDETDAGYARYFAYMNLFMFSMLTLVLANNFLLMFVGWEGVGLCSYLLIGY
                     YYEKEYAAAAGKKAFVVNRIGDFGFLLGMFGVFSLFGTLDFGDVFSRAAAEPSHFAPG
                     LTVVCLLLFL"
     gene            complement(686..1000)
                     /gene="nuoK"
                     /locus_tag="VNA10_01110"
     CDS             complement(686..1000)
                     /gene="nuoK"
                     /locus_tag="VNA10_01110"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016547346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HVG36307.1"
                     /translation="MTANGIPIGDVLLASAALFVIGLAGALLRRNAISIFLAIELMMN
                     AANLTVLGYAAALHSLEGQIVVFFVIAIAAAEAAVGLAIFVALFRHTETIDVNQINLL
                     KW"
     gene            complement(997..>1116)
                     /locus_tag="VNA10_01115"
     CDS             complement(997..>1116)
                     /locus_tag="VNA10_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007535803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HVG36308.1"
                     /translation="APVAKLLFSDHLLSFEALSILLLAALVGAFVLARREGSP"
BASE COUNT          248 a          344 c          387 g          137 t
ORIGIN      
        1 caggaagagg aggaggcaga ccaccgtcag gcccggcgcg aaatggctcg gctcggcggc
       61 cgcgcgcgaa aagacgtcgc cgaagtcgag agtgccgaac agcgagaaga cgccgaacat
      121 ccctaggagg aagccgaagt cgccgatgcg gttgacgacg aacgccttct tgccggccgc
      181 cgcagcgtac tccttctcgt agtagtaccc gatcaggagg taggagcaca gcccgacccc
      241 ctcccacccg acgaacatca ggaggaagtt gttcgcgagg acgagcgtca gcatcgagaa
      301 catgaacagg ttcatgtatg cgaagtagcg cgcgtacccc gcgtcggtct cgtcgtgttt
      361 catgtacccg atcgagtaga cgtggatgag aaaaccgacg aacgtcacga acgagaccat
      421 cagcgccgag agcggatcaa ggcggaacga caggtccacg gagaagttgc ccgccgcgat
      481 ccacggagcg agtcgctcga cgaccggcgc gcccccctcc cggagaaaag gcaccagccg
      541 ggtccacgcc gcgagcgtgg cgagtccgat cgaaccgacg cccacggccg acacgaaacc
      601 cttgccgagc cgggtgccca cgagcaggca gaggaggaac cccgcgaggg cgagggtcgg
      661 aacgatccac agggcgaccg tcatgtcacc acttcagcag gttgatctgg ttgacgtcga
      721 tcgtttcggt gtggcggaac agggccacga agatggcgag accgacggcg gcctcggcgg
      781 cggcgatcgc aatcacgaag aagaccacga tctgcccctc gaggctgtgg agcgccgcgg
      841 cgtagccgag caccgtcaag ttcgcggcgt tcatcatcag ctcgatcgcg aggaagatcg
      901 agatcgcgtt gcggcgcagc agggctccgg cgaggccgat cacgaagagc gcggcggagg
      961 cgaggaggac gtcgccgatc gggattccgt tcgcggtcaa gggcttccct cccgccgcgc
     1021 gaggacgaag gcgccgacga gcgcggcgag gagcaggatc gaaagcgctt cgaacgaaag
     1081 caggtggtcg gagaacagga gctttgccac cggcgc
//
LOCUS       DATLMA010000090         1020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_732986, whole genome shotgun sequence.
ACCESSION   DATLMA010000090 DATLMA010000000
VERSION     DATLMA010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_732986"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VNA10_01120"
     CDS             complement(<1..195)
                     /locus_tag="VNA10_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020385769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HVG36309.1"
                     /translation="MADAEVVFRVKRYRPESGARPAFQEYRIPYRHDMVVLDGLNYIK
                     DHVDPTLTFRWSCRMGICGSC"
     gene            complement(195..>1020)
                     /locus_tag="VNA10_01125"
     CDS             complement(195..>1020)
                     /locus_tag="VNA10_01125"
                     /inference="COORDINATES: protein motif:HMM:NF014907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HVG36310.1"
                     /translation="PYGQYLGLDLRHLGAATIDQKLPMVRELAEKYMGLDPIHEPIPV
                     RPGQHYIMGGVSTNSTGETTLPGLYAVGETACVSINGANRLGSNSLSECLVFGEWCGL
                     AAAQFAKQKAAYPRGTASREALRKEETRVFDGLMGRERGKETLAGVRVEMQQLMERDV
                     GIFRDEAGLSDACGKLAKLRDRFAYVGLADKDRVFNTEMTGVLELDLMLDVAASIAYS
                     ALNRRESRGAHSRTDFPQRDDANFLKHTLAFRTDAAPRIDYVPATITKWQPVERKY"
BASE COUNT          162 a          348 c          321 g          189 t
ORIGIN      
        1 gcaggatccg cagatgccca tccggcagga ccaacggaag gtaagcgtgg gatcgacgtg
       61 gtctttgatg taattcaatc cgtccaggac gaccatgtcg tggcggtacg ggatccggta
      121 ttcctggaag gcaggccttg cgccggattc cggccggtac cgcttcaccc gaaagacgac
      181 ttccgcatcc gccatcagta cttcctctct accggctgcc acttcgtgat cgtcgccggc
      241 acgtaatcga tccgcggcgc cgcgtccgtc cggaacgcga gcgtgtgctt caggaagttt
      301 gcgtcgtccc gctgcgggaa gtcggtgcgg ctgtgggcgc cccgcgactc ccgtcggttc
      361 aaggcgctgt aggcaatcga cgccgcgacg tccagcatga ggtcaagctc gaggaccccg
      421 gtcatctctg tgttgaagac gcggtccttg tccgccagac cgacataagc gaagcggtcc
      481 cggagcttgg caagttttcc gcatgcgtcg gagaggccgg cttcgtcccg gaagatcccg
      541 acgtcccgct ccatgagttg ctgcatctcg acgcggacgc ccgcgagggt ctccttcccc
      601 cgctcccggc ccatcaggcc gtcgaacacg cgggtctcct ccttccgcag ggcctctcgc
      661 gacgccgtcc cccgaggata cgcggccttc tgtttcgcga actgcgccgc cgcgaggccg
      721 caccattcgc cgaacacgag gcattcgctc aggctgttcg agccgaggcg gttcgccccg
      781 ttgatcgaga cgcacgcggt ctcgccgacc gcgtagagac cgggtagcgt cgtctcaccc
      841 gtggaattcg tcgacacccc gcccatgatg taatgctgcc ccgggcgcac cgggatcggc
      901 tcgtgaatcg gatcgagtcc catgtacttc tccgcgagct cgcggaccat cgggagcttc
      961 tggtcgatcg tcgcggcgcc gaggtgacgc aggtcgagac cgaggtactg cccgtatggc
//
LOCUS       DATLMA010000091         1008 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_189198, whole genome shotgun sequence.
ACCESSION   DATLMA010000091 DATLMA010000000
VERSION     DATLMA010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189198"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VNA10_01130"
     CDS             complement(<1..335)
                     /locus_tag="VNA10_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36311.1"
                     /translation="MSASGSVQWPSANNPIWSFNWTLADSPDAEGIVISSAFFRGHEV
                     FYKASLPSLRVQYDGSCGPYKDPLNYNDAQPNPVNKVNVYTVGFWGFLGVVVEGYHTI
                     GNYKLTERW"
     gene            complement(332..562)
                     /locus_tag="VNA10_01135"
     CDS             complement(332..562)
                     /locus_tag="VNA10_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36312.1"
                     /translation="MSEDEQLVGTAILVSSSDQASPSSNHRRFDVRFGCPSERLPRFM
                     AMVDLSREAVVSVGSCSARDLGHAVRDEEVQP"
     gene            complement(559..>1008)
                     /locus_tag="VNA10_01140"
     CDS             complement(559..>1008)
                     /locus_tag="VNA10_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36313.1"
                     /translation="PPRVLQHGELPPVIEPALQGVPAFDGPTPDHFEPFASEELPPAV
                     SAESFERIRGAVLEHGAVREQLAGVRFEWIGVSVLDAKAGKDGGEGALLAILYSYRDD
                     QAIEVRLDRDGEKIHDVSVRAYQPPPPKRRSKGRSSSRGRIRGLPSA"
BASE COUNT          168 a          350 c          316 g          174 t
ORIGIN      
        1 taccagcgct cggtcagctt gtagttgccg atcgtgtggt acccctcgac gacgactcct
       61 aggaaccccc agaacccgac cgtgtacacg ttgaccttgt tgaccgggtt gggttgcgcg
      121 tcgttgtagt tcagcgggtc cttgtatggc ccgcagctgc cgtcgtactg gacacgaagc
      181 gaggggagac tggccttgta gaagacctcg tggccgcgga agaaggcgct cgagatcacg
      241 atgccttccg catcgggaga atctgcgagc gtccagttga agctccagat gggattgttg
      301 gcgctcggcc actgcaccga accggacgca ctcacggctg cacctcctcg tctcgcactg
      361 cgtggccgag gtcgcgggca ctacacgagc cgacgctgac gaccgcttcc cggctgaggt
      421 cgaccatcgc catgaacctc ggcagccgct cggacggaca gccgaaccgc acatcgaacc
      481 ttcgatggtt ggaactcggc gaggcctgat cgctcgagct gacaagaatc gccgttccca
      541 ccagctgctc gtcctcgctc atgcgctcgg caagccgcgg atccgcccgc gcgagctcga
      601 ccgccctttc gatctccgct tcggtggggg cggctgatag gcccggacgg agacgtcgtg
      661 gatcttctct ccgtcgcggt cgagccgcac ctcgatcgct tgatcgtccc ggtacgagta
      721 caggatcgcg agcaacgccc cctcgccgcc gtccttcccg gctttcgcgt cgaggacgct
      781 gacgccgatc cactcgaagc gcacgccggc caactgctcc ctgaccgccc cgtgctcaag
      841 caccgctccg cggattcgct cgaacgactc ggcagaaacg gccgggggaa gctcctcgct
      901 cgcgaacggc tcgaaatgat ccggcgtggg accgtcgaac gcgggtacgc cctgcagcgc
      961 cggctcgatc acgggaggaa gctccccgtg ctgcagtacg cgcggcgg
//
LOCUS       DATLMA010000092         1032 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_69458, whole genome shotgun sequence.
ACCESSION   DATLMA010000092 DATLMA010000000
VERSION     DATLMA010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69458"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1032
                     /locus_tag="VNA10_01145"
     CDS             <1..>1032
                     /locus_tag="VNA10_01145"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HVG36314.1"
                     /translation="GLAAAHSRGIVHRDLKPENVFLTSTGRAKILDFGLARREALPVP
                     PDETLQRTETQMTEPGTVMGTVGYMSPEQVKGFPVDHRSDIFSFGTILYELLSGKKAF
                     QRDTNAETMAAIMRDEPPELSESGRNSSPALDRLVKHCLEKNRDHRFQSARDIAFNLL
                     EQSSPTVPSGAREIARPAASEGFWVAVLPFKYGGANADLAALADGLSEEIVTGLSRFR
                     YLSVVASASAARLKGETGDERTLGAKLGARYVLEGSIRKGGAGIRVSAQLVDTQTGAQ
                     LWAETYNRDLQASTIFAAQDDVAARIVATVADSYGVLVRSMRDAIRQKDDAELTPAEW
                     QFQFFAYRE"
BASE COUNT          194 a          327 c          334 g          177 t
ORIGIN      
        1 acgggctcgc cgcggcgcat tcccgcggca tcgttcaccg cgacctgaaa cccgagaacg
       61 tctttctgac atctaccggc cgcgccaaga tcctcgattt cgggctcgcg cgtcgagagg
      121 ctctccccgt tccgcccgac gagacactgc agaggaccga aacccagatg accgaaccgg
      181 ggacggtcat ggggacggtg ggctacatgt cgcccgagca ggtgaaagga ttcccggtcg
      241 atcaccggtc ggacatcttt tccttcggga cgattctcta cgagttgctc tcggggaaga
      301 aggcgttcca gcgagacacg aacgccgaga cgatggcggc aatcatgcga gacgagccgc
      361 cggagctgtc ggagtcgggg cggaacagtt cgccggctct cgaccgcctc gtcaagcatt
      421 gcctggagaa aaaccgggat catcggttcc agtctgccag agacatcgcg ttcaacctcc
      481 tggagcagtc ctcgccgacc gtcccgagcg gcgcacggga aatcgcccgg cctgccgcgt
      541 cagagggatt ctgggtcgcg gttctgccgt tcaagtacgg cggcgccaac gccgacctcg
      601 cggcgctggc cgacgggctg tccgaggaga tcgtgaccgg cctttcgcgg tttcggtatc
      661 tgtcggtcgt cgcgagcgcc tcggcagcgc ggttgaaagg tgagaccgga gatgaacgaa
      721 ccctcggtgc gaaactcggt gcgcgctacg tattggaagg aagcatccgc aagggcggtg
      781 ccggtattcg cgtgagcgcc caactcgtcg acactcagac gggcgcgcag ctttgggctg
      841 agacctacaa tcgggatctc caggcatcaa ccatttttgc ggcgcaggac gacgtcgcag
      901 cccgcatcgt cgccaccgtg gccgacagct acggggtcct cgttcgttcg atgcgggacg
      961 cgattcggca aaaggacgac gctgaactca caccagcgga gtggcagttc caatttttcg
     1021 cctaccgcga gc
//
LOCUS       DATLMA010000093         2546 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_250508, whole genome shotgun sequence.
ACCESSION   DATLMA010000093 DATLMA010000000
VERSION     DATLMA010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250508"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VNA10_01150"
     CDS             <1..991
                     /locus_tag="VNA10_01150"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36315.1"
                     /translation="DREFNLYPRKAGIFGLSDAIKEDLGLDEAEMILTNGGIEGEYIA
                     TRALLKPGDQVLSTDPSFLPIHDQVAMTGARAIEVDIYREPYVLTPDLASESMTRATK
                     ILLAIDPNNPLGSGYSRSQIKGLAEIARDHGAWFIDDITYRDFNADHVLATDFYPEKT
                     LLAYSFSKAPGLAGMRIGAIIGPPEAIRALRRFDTNVLGVNVLAQRAALAALRSKKEW
                     LPEIRRTCRRNQETIRHTVAKVDGASLPVSPSKANMFVIDLEPTGINPEVVEERLLFD
                     HLVHTRAGSYLSKKHGGEFLRVSFTVSEADCKRFADSFPVVMEKLATKSPTDS"
     gene            1015..1221
                     /locus_tag="VNA10_01155"
     CDS             1015..1221
                     /locus_tag="VNA10_01155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36316.1"
                     /translation="MGFLQELAGRVEEVAAAGGKFADAFVRTAGATVSSALVFMEREI
                     GYAQKAAKKRAGEKAEVRKAPNRK"
     gene            1741..>2546
                     /locus_tag="VNA10_01160"
     CDS             1741..>2546
                     /locus_tag="VNA10_01160"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HVG36317.1"
                     /translation="MGKSEYLNYVNGAWVPSHTEATYTVINPATGGKIAAVPQADVED
                     TRAAIDAARAAFDKGKWPRMTPGDRAAALFKLANLIEAGMDHLAPIEVQNQGKTIKQA
                     RDADIPFSVDNLRFMAGAARTLTGQASMEFAYGGTSVIRREPIGVIGQITPWNYPFMM
                     AIWKLAPALAAGNTAVLKPASLTPLTTLELGKFVEQSGIPAGTVNLITGPGGVVGHEL
                     ASSDKVDMVSLTGDTATGKDIMEAAKSNVKKLHLELGGKAPFIVFDDANIA"
BASE COUNT          486 a          831 c          799 g          430 t
ORIGIN      
        1 cgaccgcgag ttcaacctgt accctcggaa ggcggggatc ttcggcctct ccgacgcgat
       61 caaagaggac ctaggccttg acgaggccga gatgatcctg acgaacggcg gaatcgaggg
      121 cgagtacatc gcgacgcgcg ccctcctgaa gcccggggac caggtccttt cgacagatcc
      181 ctcattcctc ccgatccacg accaggtcgc gatgacggga gcgcgcgcga tcgaggtcga
      241 catctaccgc gaaccgtacg tcctcacgcc ggatctcgcc tcggaatcga tgacgcgagc
      301 cacgaagatc ctcctcgcga tcgatccgaa caatccgctc ggctcgggat actcgcggtc
      361 tcagatcaag ggcctcgcgg agatcgcccg agaccacggc gcctggttca tcgatgacat
      421 cacgtatcgg gacttcaacg cggaccatgt cctcgcaacc gatttctatc cggagaagac
      481 gctcctcgcc tattccttca gcaaggcgcc gggcctcgcc ggaatgcgta tcggggccat
      541 catcggtcct ccagaggcga tccgggccct gcggagattc gacacgaacg tgctcggggt
      601 gaatgtcctc gcccagcgcg ccgcgctcgc ggccctgcgg agcaagaagg aatggctccc
      661 agaaatccgg cgaacctgcc gcaggaatca ggagacgatt cgccacaccg tcgcaaaggt
      721 cgacggcgcc tcgctcccgg tctctccatc gaaggcgaac atgttcgtga tcgatctcga
      781 gccgaccggc atcaacccgg aggtcgtgga ggaacgcttg ctcttcgatc acctcgtgca
      841 cacgcgcgcg ggctcgtacc tgtcgaagaa gcacggcggc gagttcctcc gcgtgtcctt
      901 cacggtctcc gaagccgatt gcaagcgctt cgcggattcg ttccccgtgg tcatggagaa
      961 gctcgccacg aaatccccga cagactcata gccgtcgacg cacctgcggg tgacatgggc
     1021 tttctgcaag aactcgccgg ccgcgtggaa gaagtggccg cggcgggcgg taaattcgcc
     1081 gatgcgttcg tgcgaacggc gggggccacg gtctccagcg ccttggtgtt catggaacgt
     1141 gagatcgggt acgcgcaaaa ggccgcgaag aagcgggccg gcgagaaagc ggaagtccga
     1201 aaggccccga accgcaagta ggactctgga acacggacgc ccgcagtcgg tcgacgcacc
     1261 gcgctccgtt ttcgcggaac ctatgatccg ctttgcgatt cgtccccttc gggattcgga
     1321 gattgccaag accgccttcc cgcgggcgcg ggcatctccg ccgcagcgga catcacggtc
     1381 tttgcctccc ttcgccgggg cgccgcatgt ttcttcggtc ggaggctctt gaccttttcc
     1441 tgcggcggat tccgaaggtg caactcggcc ttctggatgt tatcaaattc acggtcgcat
     1501 gaacatttgt aaatcgttcg ttcctcgacc cggatgctgt gcgctttcat gtcatcccgt
     1561 ggcttccgat tcatgcctcc cacacttata gtattccgag tgaatatcgc gtttggagcg
     1621 aaaggcgggg gctgcgaacc accggcgtcc tcgagggaat cgtcgccttg cctcccttcg
     1681 tcgaggcgcg aaactactta gcacgccgtg accctaaccg cttccaccgg gggcgaatca
     1741 gtgggcaaat cggagtatct caactacgtg aacggcgcgt gggtgccgtc ccacacggaa
     1801 gcgacgtaca ccgtgatcaa tcccgcgacg ggcgggaaaa tcgccgcggt accccaggcg
     1861 gacgtcgagg acacgcgagc ggcgatcgac gcggcgcggg ccgcattcga caaggggaag
     1921 tggccccgca tgacgcccgg cgaccgcgcg gcggcgctgt tcaagctggc gaacctaatc
     1981 gaggccggca tggaccacct cgcgccgatc gaggtccaga accaggggaa gacgatcaag
     2041 caggcgcggg acgccgacat cccgttctcc gtcgacaacc tgcggttcat ggcgggtgcg
     2101 gctcggacgc tgaccggcca agcgtccatg gaattcgcct acggcgggac gagcgtcatc
     2161 cggcgggaac cgattggcgt catcggccag atcacgccgt ggaactatcc gttcatgatg
     2221 gcgatctgga agcttgcgcc cgcactcgcc gcggggaaca cggcggtcct gaagccggcg
     2281 tcgctcacgc cgctcacgac cctcgaactc gggaagttcg tcgagcagtc cgggatcccg
     2341 gcggggaccg tgaacctgat cacgggtccg ggcggggtcg tcgggcacga gctcgcctcc
     2401 agcgacaagg tcgacatggt ctcgctgacc ggcgacaccg cgacggggaa ggacatcatg
     2461 gaagccgcga agtcgaacgt gaagaagctc cacctcgaac tcggcggcaa ggcgcccttc
     2521 atcgtcttcg atgacgcgaa catcgc
//
LOCUS       DATLMA010000094         2699 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_672195, whole genome shotgun sequence.
ACCESSION   DATLMA010000094 DATLMA010000000
VERSION     DATLMA010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672195"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..884)
                     /locus_tag="VNA10_01165"
     CDS             complement(255..884)
                     /locus_tag="VNA10_01165"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HVG36318.1"
                     /translation="MELMKGVHVIETYATTTLLVDDRLVLIDTSADADGGKVLDYFAK
                     IKMKPKDLSTIFITHTHPDHVGGLAAIKHGSPAKVASSRIEADFIARKRVYDGPPGIQ
                     RHPGTPVDVPLDDGQLHDGLRVIFTPGHTRGSMSLLDESRSLCVAGDAVNNESGLKPM
                     PDQYNVDPKQHRASIKKLATFHFENVVMGHGTPIIGGASTKIAELAKRL"
     gene            946..2370
                     /locus_tag="VNA10_01170"
     CDS             946..2370
                     /locus_tag="VNA10_01170"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HVG36319.1"
                     /translation="MHRSTDARVGFLWLAVVPAAVRSLALTDVLSRVEADAGKALEIL
                     KEYVRFPTISAHKRAQPETAAFVRRLLVENGFEAREYPTDGGPNVVFGQMIVDERKPT
                     LLMYQHYDVQPVDPLNEWKRDPFDPTIEDGKFWGRGCADTKGNFIMQLLAVQAWQGVE
                     GRPPINLKFVVEGEEEVGSPHFGSFVHANQEILHADGATIEGGDHLHEGTPKIELGCK
                     GILYVEVMSRTAKVDQHSSYAAIAPNPAWRLIQALMTLRDVNGRIKVPGWYKDARRPT
                     ARELRYLRASAFKADALKEFWGVSEFVGDGNDFDVLRRLIYSPTCTICGFVSGYIEQG
                     TKTVNPAVAKAKIDFRLVPNMKQAKQFAKLRDHLIEKGFGDIELVPAKEALEAAAIPL
                     SARVVKAAIKGSVDAYGREPEVWPWSAGASAHGFFNEVVGVPSISGPGVSYDGSNYHA
                     PNEHFRMEDFVGGSKHMAAMFARM"
BASE COUNT          487 a          836 c          890 g          486 t
ORIGIN      
        1 gacctctgcg tggacaggga aggtcgtaga caccttggtc gcggtcgagg ccgagcccgc
       61 ggccgcgccg gagacgaaag cgcccgccat cacgaggacc gccacgatgg cggcaaaccg
      121 tcgggcgagg gcgctcaatc gggccgacaa cagggggaag cctccgcgat ttcgagggct
      181 ggacgcgcat atgaaccgcg ccccttcata aacctctgcc cgtgattgtc agcagttgac
      241 atcggatgga ttcgtcacag ccgtttcgcc aattcggcga tcttcgtact cgccccgccg
      301 atgatcgggg tgccgtggcc catcacgacg ttctcgaaat gaaacgtggc gagtttcttg
      361 atggatgccc ggtgctgttt cgggtcgacg ttgtactggt ccggcatggg cttcaggccg
      421 gactcattgt tcaccgcgtc gcccgcgacg cacagcgagc ggctctcgtc gaggagcgac
      481 atgctccctc gggtgtggcc cggcgtgaag atgacccgga ggccgtcgtg cagctgcccg
      541 tcgtcaagag ggacgtcgac gggcgtgccc gggtgccgtt ggatccccgg cggaccgtcg
      601 tacacgcgct tgcgggcgat gaagtccgct tcgattcgcg aggacgccac cttcgccggc
      661 gacccgtgct tgatcgccgc gagtcctccg acgtgatccg gatgggtatg ggtgatgaag
      721 atcgtcgaga ggtctttcgg tttcatcttg atcttcgcga agtaatcgag gactttcccg
      781 ccatcggcgt ccgcggaggt gtcgatcagg acgaggcggt cgtcgacgag caacgtggtc
      841 gtcgcatagg tctcgatgac gtgcacccct ttcatgagtt ccatcgtatc gccgggatgc
      901 gcagcccgtt cgtcgtctta ttcctttcgc ggaatcggct cgaggttgca ccggagcacc
      961 gacgcacgcg tggggttctt atggctcgcc gtcgttcccg cggcggtgcg tagtttggcc
     1021 ctcacggatg tcctgagccg cgtcgaggcg gatgcgggca aggcgctcga gatcctgaaa
     1081 gagtacgtcc ggttccccac gatttcggca cacaagcggg cccaacccga gaccgcggcg
     1141 ttcgtccgcc gtctgctcgt cgagaacggt ttcgaggccc gcgaatatcc gacggatggc
     1201 gggccgaacg tcgtcttcgg tcagatgatc gtcgacgagc gcaagccgac gctcctcatg
     1261 taccagcact acgacgtcca accggtcgac ccgctgaacg aatggaagcg ggatccgttc
     1321 gacccgacga tcgaggacgg caagttctgg ggccgaggct gcgcggacac gaagggcaac
     1381 ttcatcatgc agctcctcgc ggtccaagca tggcaaggcg tcgagggtcg gccgccgatc
     1441 aacctgaagt tcgtcgtcga gggcgaggag gaagtcggga gcccccactt cggatcgttc
     1501 gtccatgcga accaggaaat cttgcatgcg gacggcgcga cgatcgaggg cggtgaccat
     1561 ctccacgagg gcacgccgaa gatcgagctc ggatgcaagg ggatcttgta cgtcgaggtg
     1621 atgagccgga ccgccaaggt ggaccagcat tcctcgtatg cggcgatcgc cccgaacccg
     1681 gcgtggcggc tcatccaggc cctcatgacc cttcgggacg tgaacggccg gatcaaggta
     1741 cccggctggt acaaggatgc gcggcggccg accgcccgcg aactgcggta cctgcgcgcg
     1801 agcgcattca aagccgacgc gctgaaggag ttctggggcg tgtccgaatt cgtcggggac
     1861 gggaacgact tcgacgtgct ccgacgcctg atctactcgc ccacctgcac catctgtggc
     1921 ttcgtgagcg gatacatcga acaagggacg aagaccgtga atcccgcggt ggcaaaggcg
     1981 aaaatcgatt tccgcctcgt cccgaacatg aagcaggcga agcagttcgc gaagctccgc
     2041 gatcatctga tcgagaaggg cttcggggac atcgaactgg tccccgcgaa ggaagccctc
     2101 gaggcggccg cgatccccct gagcgcccgc gtcgtgaaag ccgcgatcaa gggatccgtc
     2161 gatgcatacg gacgcgagcc ggaggtctgg ccgtggtcgg cgggcgcctc cgcccatggg
     2221 ttcttcaacg aagtcgtcgg cgtgccctcc atctccggac ccggggtctc gtacgacggc
     2281 tcgaactatc acgcgccgaa cgagcacttc cgcatggagg acttcgtcgg cggctcgaaa
     2341 cacatggccg cgatgttcgc gcgcatgtga gccagcccac cgatcgagct cgattgtatg
     2401 gttcacttta tacctctact tagaggtacg aatgcacctg tcgacggcac cgcgagggcg
     2461 ggcctgaggt cgcctggcgg agggcctcgt cgcgttccca aactcttaag gcccggagga
     2521 ggttcgcctc gcccaatgga cacggacgtc aatctctgca aggtcgatga cgttccggac
     2581 ggcgggaaga agcacttcga gatcatgggg tacgacatcc tcgtcgtccg cctcggggac
     2641 cgtttcttct gtgtcgacgc cgcctgcacg tacaagtggg cgatgttgac ggacggcct
//
LOCUS       DATLMA010000095         1376 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_370958, whole genome shotgun sequence.
ACCESSION   DATLMA010000095 DATLMA010000000
VERSION     DATLMA010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370958"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..626)
                     /locus_tag="VNA10_01175"
     CDS             complement(<1..626)
                     /locus_tag="VNA10_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36320.1"
                     /translation="MSTQPSLGERRPRPRIETLADLVFGLSLSVGAIGLIASSPTTQG
                     EINNHIFAFGFTFLVLITAWIIYTTYMSVLPGDTRAVTFLNVALLLLVAIVPYLLNSV
                     ELSNPSLSPAEASAIGAYASTLFTLDLTGLMVILAAFAHVISLEEKNLVAPELARLFR
                     NGRNRMLILSVATAISIAPQFWEWTLFGVPVRLYIWYVPFISYWVGRVV"
     gene            complement(640..>1376)
                     /locus_tag="VNA10_01180"
     CDS             complement(640..>1376)
                     /locus_tag="VNA10_01180"
                     /inference="COORDINATES: protein motif:HMM:TIGR01250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HVG36321.1"
                     /translation="LAQFGYRIVLMDQLGCGKSERPRGTDLYTIAHNVEEVEAMRKAL
                     HLGRIHLMGSSYGGALAIATALKYQRNLRSLIITGGLASVPLTVREMRRLANRLPPKT
                     RAAIAKYEATEDYQNPEYLAAVDVFYRRYLCRLPVWPRELTYTLEHASQPVYFTMNGP
                     NEFTIIGTIKDWDVTDQLPRIKVPTLVTVGRYDEVTPRVAESIHRGIRGSKLVRFEKS
                     AHLAMWEERAHYIEVVRDFLDGVRPN"
BASE COUNT          265 a          411 c          455 g          245 t
ORIGIN      
        1 acgacccttc cgacccaata cgagatgaac ggcacatacc agatgtacag ccggaccggc
       61 accccgaaca gggtccactc ccagaactgc ggggcaatcg agatcgcggt cgcaacggag
      121 aggatcagca tgcgattcct cccgttccgg aacaggcggg ccagttcggg cgcgacgagg
      181 ttcttctctt ccaagctgat cacgtgcgcg aacgcggcca ggatcaccat gagtcccgtg
      241 aggtccaggg tgaagagagt ggacgcgtac gctccgatcg cggacgcctc ggcagggctc
      301 agcgacgggt tcgagagctc cacgctattc agcaagtagg ggacgatcgc gaccagcaag
      361 aggagggcga cgttgaggaa ggtgacggcc cgcgtgtctc ccggcaggac ggacatgtac
      421 gtcgtgtaga tgatccacgc ggtgatgagg accaagaagg tgaagccgaa cgcgaagatg
      481 tggttgttaa tctcgccctg ggtcgttggc gagctcgcga tgagaccgat ggcgccaacc
      541 gataaggaga ggccgaagac cagatcggca agcgtctcga tccgcgggcg aggacgccgt
      601 tcgccgaggg acggctgcgt cgacatccgt tagactcctt cagttcggcc ggacgccgtc
      661 caagaaatcg cggacgacct cgatgtaatg agcccgttcc tcccacatcg ccaaatgggc
      721 gctcttctcg aaccggacga gctttgagcc gcggatgccc cgatgaatgc tctcggccac
      781 gcggggtgtc acctcgtcgt agcggcccac ggtcacgagg gtcgggacct tgatgcgggg
      841 gagttggtcc gtcacatccc aatccttgat cgtgccgatg atcgtgaact cgttcggtcc
      901 gttcatcgtg aagtagaccg gttggctggc gtgctcgagg gtgtacgtca gctcgcgagg
      961 ccacacgggg aggcggcaca agtacctccg gtagaacacg tcgacggccg cgaggtactc
     1021 ggggttctgg tagtcctcgg tcgcctcgta cttcgcaatg gcggcccggg tctttggcgg
     1081 aagacgattc gcgagccgcc tcatctcgcg gaccgtcaac gggacgctcg ccaggcctcc
     1141 cgtgatgatg aggcttcgga ggttccgctg gtatttcaac gccgtcgcga tcgcgagggc
     1201 accgccatag ctcgagccca tcaggtggat ccttccgagg tggagcgcct tgcgcatcgc
     1261 ctcgacctct tcgacgttgt gggcgatggt gtagaggtcc gttccacggg gacgctcgga
     1321 tttcccgcaa ccgagttggt ccatcaacac gattcgatac ccgaactggg cgaggt
//
LOCUS       DATLMA010000096         1252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_793624, whole genome shotgun sequence.
ACCESSION   DATLMA010000096 DATLMA010000000
VERSION     DATLMA010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793624"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1001)
                     /locus_tag="VNA10_01185"
     CDS             complement(72..1001)
                     /locus_tag="VNA10_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36322.1"
                     /translation="MKIPLLPPVVPPHVFCLLADGVTWANVRRDPVPGFVDSRHFAYP
                     PNTLGSGPSGTPLFSRDAIVDAVEVARKLSGGLSRASIVFPDSWARILPIDFDTLPDS
                     EDAVRDMVLWKLKKLLPGISEDLSVVFDQMPKAGEEGELRLLVAAAPSEMLRSIEQSF
                     ESVGVRVGALAPSSLILFDGLAPVLGTLAGGDYGLLHRSPGSLVFVIARDGNPVFFRQ
                     RPEEEGEEGEDQDQEVRLSLSYYLEKLHGAGLSAVYVHDAAPGRELASGSALPVPQTR
                     LSGSLFSADRGFDERVAARPELLSAFAAVNGKS"
     gene            complement(1001..>1252)
                     /locus_tag="VNA10_01190"
     CDS             complement(1001..>1252)
                     /locus_tag="VNA10_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014098929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilB"
                     /protein_id="HVG36323.1"
                     /translation="QVFYEGKGCLECDGTGFHGRMAIAELLDLSDRIRGLILERRPAA
                     EIKKAAKEEGMTFLREVALSKVFEGLTTLKEINKVTFVD"
BASE COUNT          245 a          388 c          439 g          180 t
ORIGIN      
        1 gagaagagtt gctcccgcca cgaaatagac gggccggtag tcgcgaaacg ggcggcgggc
       61 gaagttcagg gtcatgactt gccgttgacc gccgcgaagg ccgagaggag ctcggggcgc
      121 gcggcgacgc gctcgtcgaa cccgcggtcg gcggaaaaga gcgaccccga cagccgggtc
      181 tgcgggaccg gaagagcgga gccgctggcg agctcgcgtc ccggcgcggc gtcgtgcacg
      241 tagacggcgg aaagaccggc gccgtgaagc ttctcgaggt agtaggaaag ggagaggcgg
      301 acttcctgat cctggtcctc tccctcttcg ccctcctctt ccggccgctg gcggaagaag
      361 acggggtttc cgtcgcgcgc gatcacgaag acgagcgagc cgggggaccg gtggagaagc
      421 ccgtagtcgc cgccggcgag agtgccgaga accggcgcaa gaccatcgaa cagaatgagg
      481 ctcgaaggcg cgagagcgcc gacacgaacg cccacgctct cgaaagactg ctcgatcgag
      541 cggagcattt cggagggcgc ggccgcgacg aggagacgca gctccccctc ttctcccgcc
      601 ttcggcatct ggtcgaagac gaccgacagg tcttcgctga tgccggggag gagcttcttc
      661 agcttccaga ggaccatgtc gcgcaccgcg tcctccgagt ccggaagggt gtcgaaatcg
      721 atcgggagga tgcgcgccca ggaatcggga aaaacgatgg aggcgcgcga gagcccgccc
      781 gacagtttcc gggcgacctc gaccgcgtcc acgatggcat ctcgggagaa cagcggagtt
      841 ccagacgggc cggagccgag agtattcggg ggatacgcga agtggcgcga gtcgacgaac
      901 ccgggcaccg ggtcgcgccg aacgttcgcc cacgtcacgc cgtccgcgag aaggcagaag
      961 acatgcggag gaacgacggg aggcaggaga ggaatcttca tcagtcgacg aacgtgacct
     1021 tgttgatttc cttcaacgtg gtcaatccct cgaagacctt cgagagggcc acttcgcgaa
     1081 ggaacgtcat cccctcttcc ttggccgctt tcttgatctc ggcggcgggc cgccgctcca
     1141 ggatgagacc ccggatgcgg tcggacaggt cgagcagctc cgcgatcgcc atgcggccgt
     1201 ggaagccggt gccgtcgcat tccaggcagc ctttcccttc gtagaacacc tg
//
LOCUS       DATLMA010000097         1084 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_491694, whole genome shotgun sequence.
ACCESSION   DATLMA010000097 DATLMA010000000
VERSION     DATLMA010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491694"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VNA10_01195"
     CDS             <1..632
                     /locus_tag="VNA10_01195"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HVG36324.1"
                     /translation="RADPISPGQAATEQLFYLVLIPAIGIGAFVGGLVLYAVLKFRVR
                     EGHTEGPANPSTGNRRLETIWTIVPAIILVIVGIAAFQTLITTDTIPQNPDVLVEINA
                     HQWYWNFNITYIAENKGWLNSTGNFTSLNTTGAFTLKAGLTVKIILRSFDVNHAFWLI
                     PFDLKIDVIPGHSNTYWLQPLQPGDYAIRCAEYCGLNHYSMTATLHVVK"
     gene            652..>1084
                     /locus_tag="VNA10_01200"
     CDS             652..>1084
                     /locus_tag="VNA10_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36325.1"
                     /translation="MVGSSARVAVLVVAGILCASVAAAISVLQAPSKASFGLHVADLP
                     PRTGISPVNYTLYGNAVGGWGFSSTTIREPGPNITVFYGDRVNLSLTGTDSAPHSWFI
                     DYNNDQTVSPGEPNSRDFNVPGNIAGNFSFDAVQPGTWTYRC"
BASE COUNT          213 a          366 c          299 g          206 t
ORIGIN      
        1 tacgcgccga tccgatctcc cccggacagg ccgcaacgga gcagctgttc tatctcgtcc
       61 tcatcccagc gatcggcatc ggcgccttcg tcggggggct cgtcctctat gcggtcctaa
      121 agttccgagt gcgcgaaggg cacaccgaag ggccggcgaa cccgagcacg gggaaccgcc
      181 gcctcgagac gatctggacc atcgtcccgg cgatcatcct cgtgatcgtc ggaatcgcgg
      241 catttcagac gctgatcacc acggatacga tcccacagaa tccggatgtc cttgtcgaga
      301 tcaacgcgca ccaatggtac tggaatttca acatcacgta catcgccgag aacaaaggtt
      361 ggctcaactc gaccgggaac ttcacctccc tcaacacgac cggggcgttc acgctcaaag
      421 ccggcctcac ggtcaagatc atccttcgct cgttcgacgt caaccacgcg ttctggctca
      481 tcccgtttga tctcaagatt gacgtcatcc cgggccactc gaacacgtac tggcttcagc
      541 cgctgcaacc cggtgactac gcgatccgat gcgctgaata ctgcggtctc aaccactact
      601 cgatgacggc gacgctccat gtcgtgaagt gaggccagga gtctcaagcg gatggtcggg
      661 agcagcgcgc gcgttgcggt actcgtcgtc gccggaatcc tctgcgcctc cgttgccgcc
      721 gcgatttcgg tcctccaggc cccgtccaaa gcgtccttcg gacttcacgt cgccgacctg
      781 cctccgagga cgggcatctc gccggtcaat tacacgctct acggaaacgc ggtcggaggg
      841 tggggcttct cgagtacgac cattcgggag ccgggtccga atatcacggt gttctatgga
      901 gaccgggtga atctctccct caccgggacc gactccgcac ctcacagctg gttcatcgat
      961 tacaacaacg atcagaccgt ttcgcccggc gagcccaact cgagggactt caacgtcccc
     1021 gggaacatcg cggggaactt cagcttcgat gcagtccagc cgggaacctg gacctatcgc
     1081 tgcg
//
LOCUS       DATLMA010000098         1078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_554338, whole genome shotgun sequence.
ACCESSION   DATLMA010000098 DATLMA010000000
VERSION     DATLMA010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554338"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            225..626
                     /locus_tag="VNA10_01205"
     CDS             225..626
                     /locus_tag="VNA10_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36326.1"
                     /translation="MAAPPPGYYPPGPYPPQASRPIGVTLLAVLTILLGILIVLAGLL
                     FIVAPLILVGVGLPLAFGLAASVIGAIVFVFGLIWIGVGVGLLHLRGWAWWLAVIVMA
                     LSIVGSLASPITAVIPALILIYLIVVRRHFR"
     gene            687..869
                     /locus_tag="VNA10_01210"
     CDS             687..869
                     /locus_tag="VNA10_01210"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011306429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit K"
                     /protein_id="HVG36327.1"
                     /translation="MSYTRFERARIIGARALQISMGAPTITALDQEADPLDIAFREFS
                     SGSSPLNVRRFADALD"
     gene            856..>1078
                     /locus_tag="VNA10_01215"
     CDS             856..>1078
                     /locus_tag="VNA10_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004030437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36328.1"
                     /translation="MPSIDGASIRKILDSRGNPTVEVEIHAGRVTGRAAAPSGASTGT
                     HEPKALPEGGVDEAIRTFHESVEPKIKGRD"
BASE COUNT          163 a          366 c          333 g          216 t
ORIGIN      
        1 cccccggcac cgatgtcggg aatggcaccg cccatgatgc ctccctcgat gcctccgccc
       61 tgagtacgat cgaagtgcgt cgaacgacgg aggagcggaa cgccgccctc cgtcctcttc
      121 caactccagt cgcctcggcg ctgggcggtc cgtgttctct gtcgtgaaac tctggtcgaa
      181 gactagttat cccgtagcct gttcggacat ttcggagagc aaacgtggcc gctccgcctc
      241 ctggttacta cccgcccggg ccgtatccgc cgcaggcatc caggccgatt ggcgtcacgc
      301 tcctcgctgt cctcacgatc ctgctcggca tcctgattgt cctcgccggg ctcctgttca
      361 tcgtcgcccc gctcatcctc gtcggcgtcg gactgccgct cgccttcggc ttggccgcga
      421 gtgtaatcgg cgcgatcgtg ttcgtcttcg gtctcatctg gatcggggtc ggcgtcggcc
      481 tgctccacct gcggggctgg gcctggtggc tcgcggtcat cgtgatggcc ctgtcgatcg
      541 tcggaagcct cgcgtcgccc atcaccgcgg tcatccccgc cttgatcttg atctacctga
      601 ttgtcgtgcg gcgccacttc cggtgaaccg ctccggcaga aaccttttta gtgggccgca
      661 ctttggtcgc ggcggagacc tccttcttgt catacactcg ttttgaaagg gcccggatca
      721 tcggggcgcg cgcgttgcag atctccatgg gcgcgccgac gatcaccgcg ctggaccaag
      781 aagcggaccc cctcgacatc gcattccgag agttctcctc cgggagctcg ccgctcaacg
      841 tccggaggtt cgcggatgcc ctcgattgac ggggcatcga ttcgaaagat cctcgacagc
      901 cgcgggaatc cgacggtcga agtcgagatc cacgcgggaa gggtcaccgg ccgtgccgcg
      961 gcaccgagtg gtgcgagcac cgggacccac gagcccaagg cgctgccgga agggggcgtg
     1021 gacgaagcga tccggacttt tcatgaatcg gttgaaccga agatcaaagg gcgcgatg
//
LOCUS       DATLMA010000099         1019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_733550, whole genome shotgun sequence.
ACCESSION   DATLMA010000099 DATLMA010000000
VERSION     DATLMA010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733550"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..430)
                     /gene="rpsF"
                     /locus_tag="VNA10_01220"
     CDS             complement(11..430)
                     /gene="rpsF"
                     /locus_tag="VNA10_01220"
                     /inference="COORDINATES: protein motif:HMM:NF013419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HVG36329.1"
                     /translation="MRLYDIVALVTPDLNDEDAQKVASEYRKILSDGGAEIVKDETWG
                     RRRLAFPILRKREAYYHYFQVSAEPAVIAETQRRMKLSDQVLRHLAVRADLELKRAAK
                     SAVRQREKAAKRPPRPPAPMAPTSAEIPPTVEKGEPS"
     gene            complement(427..>1019)
                     /gene="pth"
                     /locus_tag="VNA10_01225"
     CDS             complement(427..>1019)
                     /gene="pth"
                     /locus_tag="VNA10_01225"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HVG36330.1"
                     /translation="RYEGTRHNAGFRVVEGVAAEEGFRIRSREGKSRVGRGHVSGKSV
                     VLALPQTFMNASGEAVRALCEKNGIGPEDLCIVFDDIDLPLGLLRMRPRGSAGGQKGM
                     ASVIERLGTNEFARLRVGVRGEHYSRERDDLGNYVLEPFGRGEKKLFEESIDRAVEAL
                     RLWLTDGIEAAMRLANRKPSSPGSDEPGLTSRRRSE"
BASE COUNT          155 a          357 c          318 g          189 t
ORIGIN      
        1 ggcgcagggc tcatgacggc tctcctttct ccaccgtggg cggaatctcg gcggacgtcg
       61 gcgccatggg ggccggcggg cgaggcggac gcttcgcggc cttctcgcgc tgccggaccg
      121 cggatttcgc ggcgcgcttc agctcgaggt cggcccgaac cgcgaggtgc cgcagcacct
      181 ggtcggagag cttcatccgc cgttgcgtct cggcgatcac cgccggctcc gcggagacct
      241 ggaaatagtg gtagtaggcc tctctcttcc gaaggatcgg aaaggccagc cggcgccgcc
      301 cccaggtctc gtccttgacg atctccgcgc cgccgtcgga aagaatcttg cggtattcgg
      361 acgccacttt ctgggcgtcc tcgtcgttca ggtcgggcgt gaccagagcg acgatgtcat
      421 agagcctcat tcgctcctcc tcctggatgt caatcccggc tcgtcggagc cgggagagga
      481 tggttttcga ttcgcgagtc tcatcgcggc ctcgatcccg tcggtgagcc agagccgaag
      541 cgcttcgacc gcccggtcga tgctctcttc gaaaagcttc ttctctcccc ggccgaacgg
      601 ctcgagaacg tagttaccca ggtcgtcgcg ctcccgggag tagtgctcac cgcgcactcc
      661 cacccgcagt cgcgcgaact cgttcgttcc gagccgctcg atcaccgacg ccatcccttt
      721 ctgtccgccg gcggatccgc gcggccgcat ccgcagaagg cccagaggca ggtcgatgtc
      781 gtcgaagacg atgcagaggt cttcgggacc gatgccattc ttttcgcaaa gagctcgaac
      841 ggcctctccg gaggcgttca tgaaagtctg cggaagcgcg agcacaacgc tctttcccga
      901 aacgtgaccg cgccccaccc gggatttgcc ttcgcgcgag cggatccgga agccctcttc
      961 cgccgccacc ccctcaacga cccggaaccc cgcgttgtgg cgggtccctt cgtagcggg
//
LOCUS       DATLMA010000100         3722 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_733685, whole genome shotgun sequence.
ACCESSION   DATLMA010000100 DATLMA010000000
VERSION     DATLMA010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733685"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VNA10_01230"
     CDS             complement(<1..1168)
                     /locus_tag="VNA10_01230"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase VI subunit B"
                     /protein_id="HVG36331.1"
                     /translation="MPSISIAEELAKKQREISVSEFFERNKQILGYDSATKALLTAVK
                     EGVDNSLDAAADADILPDILVEVKKIDKEEFVVVVEDNGPGIVKKEVANVFGRLLYGS
                     RFFSRAQRRGQQGLGISGAVMYGQITTGKPTKIRSKVAEQDVAYEIELILDTKKNRPN
                     VVEEDFVVWERSHGTRVEIPLKGRYNAGKQSIPEYLKATAIVNPHARITYRPPEGDEI
                     VFERATEELPPKTKEIPPHPHGIELGTLMAMMKETKSYKLAAFLEEEFVRVSSRVAKE
                     ICDAAGLDPDKKPKSLVLEEAKALHDAMQSAKLMSPPTDCLSPIGERLIKRGLKNVLG
                     NLRPEFYAPPLTRDPAVYSGNPFQIEVGIVYGGDLPPDQPIEVLRFANRVPLLYQ"
     gene            complement(1343..2338)
                     /locus_tag="VNA10_01235"
     CDS             complement(1343..2338)
                     /locus_tag="VNA10_01235"
                     /inference="COORDINATES: protein motif:HMM:NF024637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HVG36332.1"
                     /translation="MSDEPLSAQVWKLLLRFRKTVWFRVTYLVLLGLIVPNLLPFTAG
                     GLGCLVIILVPLAVFLVPYYLGERSVRHFAVNALPVILIAVLVGGAQSTNLLLGQPVA
                     VPLSSIPGAFASPTMALANGTVAPYHADPPQAFTFRVKLTTTGNGTPTDFRVFMNLTT
                     ISGLASYATSDYPMSFSPVPGSSNNTHLGTLYEFTTLNLSSSIYGYGFSVWDKRANWT
                     FTNLDFGPLTAPAANFYGLFVYFTAFSMILPFAFYYIILFMWWYTVRQRATRTRMLGT
                     APEIPKEKPKPKVETVEPTKSEKASKAAAFTCTNCGADVDESAEKCPNCGAVFEG"
     gene            2477..3421
                     /gene="arcC"
                     /locus_tag="VNA10_01240"
     CDS             2477..3421
                     /gene="arcC"
                     /locus_tag="VNA10_01240"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008521376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008804 - carbamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HVG36333.1"
                     /translation="MTQLVVAIGGNALQPAGEAADAAVQRRRIEATASCLADLVAAGH
                     DVVLTHGNGPQVGNILLQNEETRHLVPPMPLDVCGAESQALIGYLLAQALRNEFASRK
                     IHRDVACVVTQVLVDAGDPAFANPTKPIGPYYLRDDEILVKKAKGWKMVYDQRGGWRR
                     VVPSPRPVDVVEKDIIRTLVGNGEGRIVIAAGGGGIPVIRKDGKLVGVEAVIDKDHAA
                     VVLAQAIGWKHLVIATDVSQVALDFGKPSQKFLDLMTLTQAKKYLADGQFPPGSMGPK
                     VEAVIDFLEHGGQHAVVTDLEHLVPAVAGKAGTQLART"
     gene            3465..>3722
                     /locus_tag="VNA10_01245"
     CDS             3465..>3722
                     /locus_tag="VNA10_01245"
                     /inference="COORDINATES: protein motif:HMM:NF015786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HVG36334.1"
                     /translation="MAKVPKRWYEDFFGSDYLIRYVHPETPAQVEAIDKILHVRKGGR
                     ILDVACGAGRHTIELAKRGYRVTGFDLSSPLLAEGRKAARKA"
BASE COUNT          675 a         1152 c         1191 g          704 t
ORIGIN      
        1 cctggtacaa gagcgggacc cggttggcga accgaagaac ctcgattggt tggtcgggcg
       61 gaagatctcc tccgtagacg attccgacct caatctgaaa cggatttccg gaatagaccg
      121 ccggatcccg cgtgagcggc ggggcataga actcaggtct caggttcccg aggacgttct
      181 tgaggcctcg cttgatgagc cgctccccaa tggggctgag gcagtccgtc ggaggggaca
      241 tcaacttcgc gctctgcatg gcgtcgtgga gcgccttcgc ctcctcgagg acgagggact
      301 tcggcttctt gtctgggtcg aggccggcgg catcgcagat ttccttcgcg acgcgggaag
      361 agacccgcac gaactcctcc tcgaggaagg ctgcgagctt gtaggacttc gtctccttca
      421 tcatggccat gagcgtgccg agctcgattc cgtgaggatg cggcggaatt tccttcgtct
      481 ttggcgggag ctcctctgtt gctcgctcga agacgatctc atcgccctcc ggcggccgat
      541 acgtaatccg cgcatgcggg ttcacgatcg cggtggcctt caggtattcc gggatcgact
      601 gctttcccgc gttgtagcgg cctttgagcg ggatctcgac ccgcgtcccg tgggaccgct
      661 cccagacgac gaagtcttcc tcgaccacgt tcggtcggtt cttcttcgtg tccaggatga
      721 gctcgatttc gtacgcgacg tcctgttcgg cgactttcga tcgaatcttc gtcggcttgc
      781 cggtcgtgat ctgaccgtac atcacggccc cggagatccc aagaccttgc tggccacgcc
      841 tctgagcgcg gctaaaaaac cgagatccgt atagcaagcg tccaaagacg ttcgccactt
      901 ccttcttgac gattcccggt ccattgtcct cgacgaccac gacgaactct tccttgtcga
      961 tcttcttgac ctcgacgagg atgtccggca gaatgtccgc atccgccgcg gcatcgaggc
     1021 tgttgtccac accctccttg accgccgtga ggagggcctt cgtcgccgag tcgtagccga
     1081 ggatttgctt gttccgctcg aagaattcgg agacgctgat ctcgcgctgt ttcttcgcga
     1141 gttcctccgc gatcgagatc gatggcatgg catcacgcgg gacggccgaa cagaattgtg
     1201 ggcgttccca tccctgggcc ccgcgtattt gagcttggcc atttaaggct tcgcagcccg
     1261 tttcgcaatg ccgtttctat ggaggggagg gtacattacg cgcgcccgtg gaggtgggtg
     1321 aaagtgtccg cttcccgtcg gttcaccctt cgaatacggc cccgcagttc gggcacttct
     1381 cggcactctc gtcgacgtcg gcgccgcagt tcgtgcacgt gaacgcggcc gccttgctgg
     1441 ccttctcgct cttcgtcggt tcgaccgttt ccaccttggg cttcggcttc tccttcggga
     1501 tctccggcgc ggtgccgagc atccgggtgc gcgtcgcccg ctgccggacc gtgtaccacc
     1561 acatgaacag gatgatgtaa tagaacgcga acggcaggat catcgagaat gcggtgaagt
     1621 agacgaacaa gccgtagaag ttcgctgcgg gcgccgtcag cggcccgaaa tcaagattcg
     1681 tgaacgtcca gttcgcgcgc ttgtcccaca ccgagaatcc gtagccatag atcgagctcg
     1741 agagattgag cgtcgtgaac tcgtacaagg tgccgaggtg cgtgttgttc gagctgcccg
     1801 gcaccggact gaacgacatc gggtagtccg aggtcgcata ggaggcgagg cccgagatcg
     1861 tcgtgagatt catgaacacc cggaaatcgg tcggcgtccc gttgcccgtc gtcgtcagtt
     1921 tgacacggaa tgtgaatgcc tgcggcggat cggcgtgata cggcgccacc gtcccgttcg
     1981 ccagggccat cgtcggactc gcgaacgcac cgggtatgct cgagagcgga accgcgacgg
     2041 gctggcccag aaggaggttc gtcgattgcg cccctccgac caagaccgcg atcaggatga
     2101 cggggagcgc gttcaccgcg aagtgtctca cggaccgttc gccgagatag tagggcacga
     2161 ggaagaccgc gagcggcacg aggatgatga cgaggcaccc gagtccgccg gccgtgaaag
     2221 ggagcagatt ggggacgatc agcccaagca ggacgaggta cgtgacccgg aaccagacgg
     2281 tcttgcggaa ccgcaagagg agcttccata cctgcgccga gagcggctcg tcactcacag
     2341 aacgatgcga tgtgggcttt tcgataaata gttatgccgg ccccatggag aacgcggttc
     2401 gggaatcgaa tttctacggc cgaacgttca aatagattct gcaaaatagg acgagacttc
     2461 catcggggcc tgagggatga cgcagcttgt cgtggcgatt ggcgggaatg cgcttcaacc
     2521 cgcgggtgag gccgcggacg cggcggtcca gcggcgccgg atcgaggcga ctgcatcctg
     2581 cctcgcggac ctcgtcgcgg ccggccatga cgtcgtgttg acgcacggca acggccccca
     2641 ggtcggcaac atcctcctgc aaaacgagga gacccggcat ctggtcccgc cgatgcccct
     2701 cgatgtctgc ggcgcggaga gccaagcgtt gatcggctac ctgcttgctc aggcccttcg
     2761 caacgagttc gcttcacgga agatccatcg ggacgtcgcc tgcgtggtga cgcaggtcct
     2821 cgtcgatgcc ggcgatccgg ccttcgcgaa tccgacgaaa ccgattggcc cgtactatct
     2881 gcgggacgac gagatcctcg tcaagaaggc gaaaggttgg aagatggtgt acgaccagcg
     2941 gggcggatgg cgccgggtcg tgccgtcgcc ccggcccgtg gacgtcgtcg agaaggacat
     3001 catccgcacg ctcgtcggga acggcgaggg acgcatcgta atcgccgcgg gtggcggtgg
     3061 gatcccggtc atccgcaagg acggcaagct cgtcggcgtc gaggccgtca ttgacaagga
     3121 ccatgcggcg gtggtcctcg cgcaagcgat cggatggaag cacctcgtga tcgcgacgga
     3181 cgtctcccag gtcgccctgg atttcggcaa gccgagccag aagttcctcg acctcatgac
     3241 cctcacccag gcgaagaagt acctcgcgga cggccagttc ccgcccggga gcatgggccc
     3301 gaaggtcgag gccgtcatcg atttcctgga gcacggcggg cagcacgcgg tcgtcacgga
     3361 cctcgagcat ctcgtccccg cggtagcggg caaggccggc acccaactcg cgcggacgtg
     3421 accgcgcaag gattttcccc gctcacgacg ttcgcggccc gccgatggcg aaggtcccga
     3481 agcggtggta cgaggatttc ttcggatccg actatctgat ccgctacgtc cacccggaga
     3541 ctccggccca ggtcgaggcg atcgataaga tcctccacgt tcgaaaaggc ggacgcatcc
     3601 tcgatgttgc gtgcggcgct ggccgccata cgatcgagct cgcgaagcgc gggtatcgcg
     3661 tgacgggctt cgacctctca tcaccgctcc tcgcggaggg ccgcaaggca gcgcgcaagg
     3721 ca
//
LOCUS       DATLMA010000101         1030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_733699, whole genome shotgun sequence.
ACCESSION   DATLMA010000101 DATLMA010000000
VERSION     DATLMA010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733699"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..>1030
                     /locus_tag="VNA10_01250"
     CDS             90..>1030
                     /locus_tag="VNA10_01250"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG36335.1"
                     /translation="MEVDPRRPEALRAMARARGYRSMAAVPLLRHDEAIGAIALTRRE
                     VGGFTDDEIALLQTFADQAVIAIENVRLFTELQTRNLEIADKSRQLEVASQHKSEFLA
                     NMSHELRTPLNAIIGFSEVLSERMFGDLNEKQEEYLKDIHASGTHLLSLINDILDLSK
                     IEAGRMELELTDFDLPQAIDNALTLVRERAGRRGIALHQSVEERLGEMRGDERKVKQV
                     LLNLLSNALKFTPEGGRIEVRAASVDGSVEVSVSDTGVGIAPEDQEVVFEEFRQVGTS
                     AAKQEGTGLGLALCWKFVELHGGRIWVTSQVGVGSTFT"
BASE COUNT          204 a          312 c          340 g          174 t
ORIGIN      
        1 tgagagagac cttcccaaga tcgctccatt ccgcggggtc gtcgatcgcc cacgccatcc
       61 gtgatcgtgc gccactcaat gtcaccgaca tggaggtcga tccacgaagg cccgaagcct
      121 tgcgtgcgat ggcccgagcc cgtggctacc gaagcatggc ggcggtaccg ctgctccgtc
      181 acgatgaggc gatcggggca atcgccttga cccgacgcga agtcggcggg ttcactgacg
      241 acgagatcgc gctcctccag accttcgccg accaggccgt catcgcgatc gagaacgtgc
      301 gcctgttcac tgaactccag acgcgcaacc tcgagatcgc cgacaagagc cgccagcttg
      361 aggtcgccag ccagcacaag tccgagttcc tggccaacat gtcgcatgag ctgcggacgc
      421 cgctcaacgc gatcatcggc ttctcggaag tcctgtcgga acgcatgttc ggtgacctca
      481 acgagaagca ggaggagtac ctgaaggata tccacgcgtc cgggacgcat ttgctgtcct
      541 tgatcaacga catcctcgac ctctcgaaga tcgaagcggg acgtatggaa ctcgaactca
      601 cggacttcga tcttccacag gcgatcgaca acgccctcac gctcgtccgg gagcgcgccg
      661 gccgtcgcgg gatcgccctg caccaatcgg tggaggagcg cctgggcgag atgagggggg
      721 atgaacgcaa ggtgaagcag gtgctcctga acctcctctc gaacgctttg aagttcaccc
      781 cggagggcgg tcggattgag gtccgggctg cgtcggtcga cgggtcggtc gaggtatcag
      841 tcagcgacac cggggtgggc atcgcgcccg aggaccagga ggtggtgttc gaggagttcc
      901 gtcaagtcgg aaccagcgcg gcgaagcagg aggggacggg gctcggactc gcgctatgct
      961 ggaagttcgt cgagttacac gggggaagga tctgggtcac gagccaagtg ggtgtgggtt
     1021 cgacgttcac
//
LOCUS       DATLMA010000102         1108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_793973, whole genome shotgun sequence.
ACCESSION   DATLMA010000102 DATLMA010000000
VERSION     DATLMA010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793973"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VNA10_01255"
     CDS             <1..657
                     /locus_tag="VNA10_01255"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HVG36336.1"
                     /translation="GQDCTQAARFIVHEKAYKKFADKFIERLKTIRIGDPLMRATDLG
                     PLVSQKQREKVEKYVEIGEDEGAKLALGGKRPKDKAFSKGWYYEPTAFVDTDPSMRIA
                     REEVFGPVVNVQKFSNEDEAIEAANDTVYGLYSSVWTKDVQRAHRTANALRFGAVEIN
                     DHLPLVSEMPHGGYKQSGFGKDLSVYSLEDYTQIKHVFIDLTDQVRKPWHYLTFGDPT
                     "
     gene            complement(674..>1108)
                     /locus_tag="VNA10_01260"
     CDS             complement(674..>1108)
                     /locus_tag="VNA10_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36337.1"
                     /translation="VGFANAVVTKRLWFPVKGGMWVYFQQGLVMGFAVLLVGFLLSGI
                     SFFLSPIVGLVMLFVLAPPIYGAAGLWVAEFFRLSVSRRPMGPAAPSTPPRPETSVDS
                     RIGTFQRHVVCPTCGTGYDFVSESITQCPKDGTSLRPSTQGV"
BASE COUNT          255 a          331 c          365 g          157 t
ORIGIN      
        1 gggcaggatt gcacgcaggc cgcgcgattc atcgtccatg agaaggcgta caagaagttt
       61 gccgacaagt tcatcgagcg actgaagacg atccgcatcg gagacccgct catgcgggcg
      121 acggacctcg ggccgctggt ctcacagaag cagcgggaga aggtcgagaa gtacgtcgag
      181 atcggcgagg acgagggcgc gaagctcgcg ctgggcggga aacgtcccaa agacaaggcg
      241 ttctccaagg gctggtacta cgagcccacc gcgttcgtcg acacggatcc gtccatgcgc
      301 atcgcccgcg aggaagtctt cggaccggtg gtcaacgtcc agaagttctc gaacgaggac
      361 gaagcgatcg aggcggcgaa cgacacggtg tacggcctgt actcgtccgt ctggacgaag
      421 gatgttcagc gggcgcaccg cacggcgaac gcactccgct tcggggccgt ggagatcaac
      481 gatcacctac cgctcgtgag cgagatgccg cacggcgggt acaagcagag cggcttcggg
      541 aaggacctca gcgtctactc cctcgaggac tacacgcaaa tcaagcacgt cttcatcgac
      601 ctcacggacc aggtccggaa accgtggcac tacctgacgt tcggcgatcc gacgtgagcc
      661 gggtccgacg gcatcagacg ccttgggtcg aaggacgcaa cgacgtgccg tctttcggac
      721 attgcgtgat gctctccgac acgaagtcgt agccggtgcc gcacgtcgga caaacgacgt
      781 ggcgctggaa cgttccaatg cgggaatcga ccgatgtctc cggtcgaggt ggggtcgatg
      841 gcgccgcggg tcccatcgga cgccgggaca cggagagtcg gaaaaactcc gccacccaga
      901 ggccggcggc gccgtagatc gggggagcca gcacgaacag catgaccaac ccgacgatcg
      961 gggagaggaa gaatgagatg cccgagagca ggaagcctac gagcaggacc gcaaaaccca
     1021 tgaccaaacc ttgctggaag tacacccaca ttcctccttt aacggggaac cagagacgct
     1081 tggtgacgac ggcgttagcg aagccgac
//
LOCUS       DATLMA010000103         1124 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_311122, whole genome shotgun sequence.
ACCESSION   DATLMA010000103 DATLMA010000000
VERSION     DATLMA010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311122"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /locus_tag="VNA10_01265"
     CDS             complement(<1..846)
                     /locus_tag="VNA10_01265"
                     /inference="COORDINATES: protein motif:HMM:NF024313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36338.1"
                     /translation="MILKQLRFLFKRSWASLRESRLGIAGFSVVLVFATIAIFAPWIA
                     PYPKTFEAPASDRFIVNSYNLTLPTVPAGSAYGVPVMGPTTPLSSDRAGSMWLINSAD
                     SGLIRMDNLRYTLGVNESPFQAGNRSLFLDVHSDFGFIPLLDAPLSNVYYIVPGRNLS
                     GQLGSGIDNGALAFFSGRDFAAVNPFTKANIARDRLDFNPVYTGEDPASSGNLLVVPL
                     ERSVTVGSFPVPRGPYRYFFASDLNRTNVYELTYVHQGDPTAPSGRLLFQTNVSLSAP
                     PFVYYN"
     gene            complement(881..>1124)
                     /locus_tag="VNA10_01270"
     CDS             complement(881..>1124)
                     /locus_tag="VNA10_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008086121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HVG36339.1"
                     /translation="NAYLPIVTTLAISLGFVIGGAIILEQVFSYYGMGWYLLQSIFKQ
                     DNMLAGAILYLISVLVILGNIVADILYGVLDPRVRL"
BASE COUNT          251 a          313 c          370 g          190 t
ORIGIN      
        1 attgtagtag acgaacgggg gagcgctgag gctcacgttc gtctggaaca acaggcgtcc
       61 ggagggggca gtcggatcgc cctgatggac gtacgtgagc tcgtacacgt tcgtgcggtt
      121 caggtccgac gcgaagaagt atcgatacgg ccccctcggg accgggaagc tgccgacggt
      181 gacggagcgc tcgagcggca caacgaggag gttgcccgac gatgcaggat cctcgccggt
      241 gtacaccgga ttgaagtcga ggcgatcacg cgcgatgttc gccttcgtga acggattgac
      301 ggcggcgaaa tcccgcccgg agaagaatgc cagggcgccg ttgtcgatgc ccgacccaag
      361 ctgaccgctg aggttcctgc ccgggacgat gtagtagacg ttcgacagcg gcgcatcgag
      421 caacgggatg aagccgaagt ccgagtggac gtccaagaac aatgatcggt tccccgcttg
      481 gaacggactc tcgttgactc ccaacgtgta ccggaggttg tccatccgga tgagtccgga
      541 gtctgcggag ttgattagcc acatgctccc tgcccgatcg ctggacaatg gagtcgtggg
      601 tcccatgacc ggcacgccgt acgccgaacc ggccgggacg gtggggagcg tcaaattgta
      661 cgagttcacg atgaaccggt ccgatgcagg cgcttcgaac gtcttcgggt acggcgcaat
      721 ccagggcgca aaaatcgcga ttgttgcgaa gacgaggacc acggaaaagc ccgcgatccc
      781 gaggcggctc tcgcgtaagc tggcccagga gcgtttgaac aaaaagcgga gttgcttcag
      841 gatcacggag ccggagaacc tcgcggcggg cgcttcgacc tcagagacgg acacgcggat
      901 cgagcactcc gtacaaaatg tcggcgacga tgttgcctag gatgaccaac acggagatca
      961 ggtacaagat cgctcccgcg agcatgttgt cttgcttgaa gatcgactga agcaagtacc
     1021 agcccatccc gtagtaagag aagacttgct cgaggatgat cgccccgccg atgacgaagc
     1081 cgaggctgat tgccaaggtc gtcacgatcg gcaaataggc gttc
//
LOCUS       DATLMA010000104         1776 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_613338, whole genome shotgun sequence.
ACCESSION   DATLMA010000104 DATLMA010000000
VERSION     DATLMA010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613338"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1175
                     /locus_tag="VNA10_01275"
     CDS             <1..1175
                     /locus_tag="VNA10_01275"
                     /inference="COORDINATES: protein motif:HMM:NF013319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HVG36340.1"
                     /translation="IGYDINCGVRLIRTNLREGEVRPNLRALTDACFENVPSGVGEGG
                     ITKVTRQDLAKLATEGVGWSVDHGYAWPNDPDRIEAHGRLEDAEFSKVSERAITRGKD
                     QVGSLGAGNHFVEIQKVDRVYDERAAKALGIGELGQVCVMVHTGSRGFGHQIATDYIE
                     ACERVVKREKIELPDLQLACAPISSKEGLDYWKAMCCGANFAWNNRQLITYGVRNAFS
                     KILGQSPEALGMDIVYDVCHNIGKVEEHVIDGARAKVVVHRKGATRAFPAGHPETPAE
                     YQAVGQPVLIPGDMGTCSFVLVGLPTAMERSFGSSCHGAGRQMSRKAASRKFDANEVV
                     SSLNKRGIYLRAASRAGIVEEAPGAYKNVEDVVRVAEGAGLTKIVARLVPLGVVKG"
     gene            1172..1690
                     /locus_tag="VNA10_01280"
     CDS             1172..1690
                     /locus_tag="VNA10_01280"
                     /inference="COORDINATES: protein motif:HMM:NF019610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36341.1"
                     /translation="MILTLQPVGRVDASVLRRIGLELAPFGEVRIASEKPLPRRTFGP
                     GPKRYRAATFDRVCKSADGDRIIAITNVELSDPELGLTLVFGHADIQGRWAVVSLSQF
                     GGDGQAKLVERAVKTVVHELGHTLGLGHHDANPECVMFFSEKLADTDRKGRDFCPECS
                     ESAQLTLTRLQT"
BASE COUNT          348 a          543 c          591 g          294 t
ORIGIN      
        1 ggattgggta tgacataaac tgcggcgttc gtctcatccg gacgaacctc cgggagggcg
       61 aggtccggcc gaacctccgc gccttgaccg acgcgtgctt cgagaacgtg cccagcggag
      121 tgggcgaagg cggcatcacg aaggtgacgc ggcaggacct ggccaagctc gcgaccgaag
      181 gagtgggctg gtcggtcgat cacggatacg catggcctaa cgacccggat cggatcgagg
      241 ctcatggccg actcgaagac gcggaattct cgaaggtcag cgagcgggcg atcacgcgtg
      301 ggaaggacca ggtcggtagc ctcggcgccg gaaaccactt cgtcgagatc cagaaggtcg
      361 atcgggtgta cgacgagcgg gcggcgaagg ccctcgggat cggggagctg ggccaagtgt
      421 gcgtcatggt gcacaccgga tcccgcggct tcggccacca gatcgcgacg gactacatcg
      481 aggcgtgcga acgggtcgtg aagcgagaga agatcgagct gccggacctc caactcgctt
      541 gcgccccgat ctcttcgaaa gagggactag actactggaa ggcgatgtgc tgcggagcga
      601 atttcgcgtg gaacaaccgc cagctcatca cctacggggt ccggaatgcg ttctccaaga
      661 tcctgggcca atcgccggaa gccctcggca tggacatcgt ctacgatgtg tgtcacaaca
      721 tcgggaaggt ggaggagcat gtcattgacg gcgcacgcgc caaggtcgtc gtccaccgga
      781 aaggggcgac ccgggcgttt ccggcggggc atccggagac tcccgccgag taccaagccg
      841 tcggccaacc cgtgctcatc ccgggagaca tgggcacgtg ctcattcgtc ctcgttggcc
      901 tgccgaccgc gatggagcgc tcgttcggtt ccagctgcca cggggccggg cgccaaatgt
      961 cgcgcaaggc cgcgagccgc aagttcgatg cgaacgaagt cgtgagctcg ctgaacaagc
     1021 gcggaatcta ccttcgtgcg gcctcgcgcg caggaatcgt cgaggaagcc ccgggcgcct
     1081 acaagaatgt ggaggacgtc gtccgagtcg ccgaaggagc gggattgacg aaaatcgtcg
     1141 cccggttggt cccgctcggg gtcgtcaagg gatgatcctc actcttcagc cggtcggacg
     1201 ggtcgacgcg tctgtcctcc gacgaattgg attggagctc gcgccgttcg gcgaggtgcg
     1261 aatcgcgagt gagaaaccat tgccgagacg gaccttcggc cccggcccaa aacggtaccg
     1321 agccgccaca ttcgatcggg tctgcaagtc cgccgacggc gatcgcatca tcgcgatcac
     1381 gaacgtcgag ctgtccgacc ccgaactcgg actgacgctt gtctttggac acgcggacat
     1441 tcaaggtcga tgggcggtcg tctccctgtc ccagtttggg ggcgatgggc aagcgaaact
     1501 cgtcgagcgt gctgtgaaga ccgtcgtcca cgaactcgga cacacgttgg gccttggcca
     1561 ccacgacgca aatcccgaat gcgtgatgtt cttctccgag aaactggccg acacggatcg
     1621 aaagggtcgc gatttctgcc ccgagtgctc ggagtctgcg cagctcacct tgacgcgcct
     1681 acaaacgtga attgggccct gatctcgaag ccgtctcggt agcgccgcgg catctcggcc
     1741 tccaagaaac gcaggccccg ttcatactcg cccggg
//
LOCUS       DATLMA010000105         1068 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_251256, whole genome shotgun sequence.
ACCESSION   DATLMA010000105 DATLMA010000000
VERSION     DATLMA010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251256"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /locus_tag="VNA10_01285"
     CDS             <1..897
                     /locus_tag="VNA10_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008084904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase RNA specificity
                     domain-containing protein"
                     /protein_id="HVG36342.1"
                     /translation="HIGDGLYNVAMSGDIKFEKTWLFNPAVNKFPRLETLVLESTYGG
                     YHDIQPSRHEASQQLKEVMRRVLTRGGKVLVPVFAVGRSQEVMLVLEDAMRNHQIPEV
                     PIYLDGMIWEATAIHTAYPEYLNSQLRTQIFQTGENPFLSPTFKRVETADMRANIIDD
                     VEPCIVLATSGMMSGGPILEYFKGWADNPLHALVFVGFQSEGSLGRRIQREAREITLT
                     DRGQPLTLPIKMDIETVDGFSGHSDRLQLLNYVGTMEPRPERVIVNHGEEFKCSDLAS
                     GLYKKFGLETRAPMNLETIRLK"
BASE COUNT          188 a          349 c          335 g          196 t
ORIGIN      
        1 cacatcggcg acgggctcta taacgtcgcg atgtcgggag acatcaagtt cgaaaagacc
       61 tggctcttca acccggccgt caacaagttc ccgcgtctgg agacgctcgt cctcgagtcg
      121 acctatggcg ggtatcacga catccagccg tcgcgccatg aagcctccca gcagttgaag
      181 gaggtcatgc gccgcgtcct gacccgtggg ggcaaggtcc tcgtccccgt cttcgcggtc
      241 gggcggtccc aggaggtcat gctcgtcctc gaggacgcga tgcggaacca ccagatcccc
      301 gaggtcccga tctatctgga cggcatgatc tgggaggcga ccgcgatcca cacggcgtac
      361 ccggagtacc tgaacagcca gctccgcacg cagatcttcc agaccggcga gaatccgttc
      421 ctctctccga ccttcaagag ggtcgagacg gcggacatgc gggcgaacat catcgacgac
      481 gtcgaaccgt gcatcgtcct ggcgacgtcc gggatgatgt ccggcggtcc catcctcgag
      541 tacttcaaag gctgggcgga caacccgctg cacgccctcg tcttcgtcgg gttccaatcg
      601 gaaggttcgt tgggccgtcg catccagcgg gaagcgcgcg agatcacctt gacggatcgc
      661 gggcagccgc tcaccttgcc catcaagatg gacatcgaga cggtcgacgg cttctcgggc
      721 cattcggacc ggctgcagct gctcaattac gtcggtacca tggagccccg tcccgaacgg
      781 gtcatcgtga accacggcga ggagttcaag tgttccgatc tggcctcggg cctgtacaag
      841 aagttcggcc tagagacgcg ggcgccgatg aacctcgaga caattcgact caagtgaggc
      901 gccgggatgt ccgaggcgcg cggcgccgcc cggtcgggat ggacccggcg ggtaccgggc
      961 acggcggtgc tcctgttctt cttcctgtcg gcgtcgcttt ggttggcctg cgtgctctcc
     1021 taccaattcg gccagccgga cttcgtggtg ggacttctcg ccctcagc
//
LOCUS       DATLMA010000106         1012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_70384, whole genome shotgun sequence.
ACCESSION   DATLMA010000106 DATLMA010000000
VERSION     DATLMA010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70384"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..>1012)
                     /locus_tag="VNA10_01290"
     CDS             complement(145..>1012)
                     /locus_tag="VNA10_01290"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HVG36343.1"
                     /translation="GRAVLHCGRIVEIQRVLIQQVDVLETMTPLDFLDFRDDLIPASG
                     IQSVQFRLLENKLGMRRQDRLQVQAHYTSRFREEDAARVEASEKEPSLFDLIEVWLER
                     TPFLNFGDFDFWREYRRAVDAMLVADRASIRSNPTLTEGEKATQLAGVEATASRFADV
                     FEQGASEPVAAPGRHLSRRALQAALLINLYRDEPILHLPFQLLAVLTDIERNFTTWRQ
                     RHAQMAMRMIGSRIGTGGTSGHEYLDRAAERHKVFADLSALSSFFIPRSALPRLPPDV
                     RSRMGFKFQTPR"
BASE COUNT          192 a          310 c          332 g          178 t
ORIGIN      
        1 aatatcgacc gcgacttcga cgcgttcaat cgagtctacg gagagtactt cgaggcaatc
       61 cagccgacga gaacgaccgt cggcgtcgtc gcgcttccag ttccgatctc ggtcgagctg
      121 aagatcatcg ccgagagctg acggtcatcg aggagtctgg aacttgaatc ccattcggct
      181 tctcacgtcg ggaggaagcc tgggaagcgc cgaccgggga atgaagaagc tcgaaagagc
      241 cgagaggtcc gcgaagacct tgtgacgctc ggccgcccgg tcgagatact cgtgacccga
      301 cgttccgccg gtgccgatcc ggctgccgat catccgcatc gccatctggg cgtggcgctg
      361 gcgccaggtc gtgaaattcc tttcgatatc cgtcaggacc gccagcaact ggaagggcag
      421 gtgcagaatc ggctcgtccc gatagagatt gatgaggagc gccgcctgga gcgcgcgccg
      481 ggaaaggtgg cgtcccggcg ccgccacggg ttcgctggcc ccctgttcga acacgtccgc
      541 gaaccgggat gccgtcgcct cgactccggc cagctgtgtg gctttctcgc cttccgtcag
      601 cgtcgggttg cttcggatcg aggcgcggtc ggcaacgagc atggcgtcga ccgcccgtcg
      661 atactcccgc cagaagtcga aatcgccgaa gttgaggaag ggcgttcgct cgagccagac
      721 ctcgatcaaa tcgaagagag aaggctcctt ctccgaagcc tcgacgcgcg cggcgtcttc
      781 ttcgcggaag cgcgacgtgt agtgagcctg gacctgaagg cggtcctggc gccgcattcc
      841 cagcttgttc tcgagcaggc gaaattgaac gctctgaatg cccgaggccg ggatcaggtc
      901 gtcccggaaa tcgagaaagt cgaggggggt catggtttcc agaacgtcga cctgttgaat
      961 caggacgcgc tggatctcga cgatgcgccc gcagtgcagg accgcgcgcc cg
//
LOCUS       DATLMA010000107         1841 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_130686, whole genome shotgun sequence.
ACCESSION   DATLMA010000107 DATLMA010000000
VERSION     DATLMA010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130686"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1788
                     /locus_tag="VNA10_01295"
     CDS             <1..1788
                     /locus_tag="VNA10_01295"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HVG36344.1"
                     /translation="PLSGMRAPMIETTSIMFDVGVIATVGFIGAAFASRARVPIIIGY
                     IIAGMLIGPNIHLHLFGWSYDGILADSVFLQSISQLGLVLLLFFVGLEFSITKLMRTK
                     EAAAVLAVTNLAVNMFAGFVIGAWLGWPLIDTIFMAGVISMSSSAITAKSLIDLKRLG
                     NAETEFLLGMVILESFLAMFLLTLVNGMIVPSDSPVNVGALFAGVGLFIGFFALLAAV
                     VVPRTAAIFERIKSEELFVLFALGTVFLAASLAEAFRIPAIVGAFFMGMVFADTRIAG
                     RMKVKMESLRDAFVAIFFLTFGMLIDPAALGSVLPMLLIAVPLILLNDLFLTASLAYF
                     IGFSGRASTAIGTSLVARNEEAILYATVGARAIRANPQLSNDYAGTYLTPFAGILCIV
                     MSSLAPILMGRSNRIAGFFANRLPKSVRFGAELVKRTLKTVIMPNFLPIYRRKRLFQA
                     SMIFYAAWIIDLTVTTGEAHLAMSLLTPILVLAVWASARHAFREPVRHTNYGVDTGPF
                     SRSTIETFVLRIVVGALAIVGLVAIVWQYYWPLTLVILYAYFLVVVFSMKVVYRRLGL
                     GITRRVARVRLVRHMPAARSWRAASGVRR"
BASE COUNT          269 a          602 c          569 g          401 t
ORIGIN      
        1 ccactgtccg ggatgcgtgc gcccatgatt gagacgacct cgatcatgtt cgacgtgggc
       61 gtcatcgcca cggttggttt catcggagcg gccttcgcat cccgcgcacg cgtaccgatc
      121 atcatcgggt acatcatcgc gggcatgctg atcggcccga acatccacct tcatctgttc
      181 ggctggtcgt acgatgggat tctggcggac agcgtgttcc tgcagagcat ctcgcaactc
      241 ggactggtcc tgcttctgtt cttcgtggga ctcgagttca gcatcacgaa gctcatgcgg
      301 acgaaggaag ccgccgcggt cctcgcagtg acgaacctgg cggtcaacat gttcgcgggg
      361 ttcgtgatcg gggcgtggct cggatggccc ttgatcgaca cgatcttcat ggccggggtc
      421 atcagcatgt cgagctcggc gatcaccgcg aagtccctga tcgacctgaa gcggctcggg
      481 aatgcggaga cggaattcct ccttggcatg gtgatcctgg agtcgttcct cgccatgttc
      541 ctcctcacgc tcgtcaacgg catgatcgtg ccttccgatt cgccggtgaa cgtgggcgcc
      601 ctgtttgccg gggtcgggtt gttcatcggc ttcttcgccc tcctggcggc ggtcgtggtt
      661 ccacggaccg ccgcgatctt cgagcggatc aagagcgagg agctgttcgt cctcttcgcc
      721 ctcggaacgg tcttcctggc ggcgtccctc gcggaggcgt tccggatccc cgccatcgtg
      781 ggcgcattct tcatggggat ggtcttcgcg gacacccgca tcgcggggcg gatgaaagtc
      841 aagatggagt ccctgcggga tgcgttcgtc gcgatcttct tcctcacctt cgggatgttg
      901 atcgacccgg cggcgctggg ctccgtcctc ccgatgctcc tgatcgcggt gccgttgatc
      961 ctcctgaacg acctgtttct gaccgccagc ctcgcgtatt tcatcggctt ctccggtcgc
     1021 gcatcgaccg cgatcggcac gagcctcgtc gcccgaaacg aggaggcgat cctctacgcg
     1081 accgtaggcg cgcgcgcgat ccgggcgaac ccccagctct cgaacgatta cgcgggcacg
     1141 tacttgaccc cgttcgcggg gatcctgtgc atcgtgatga gctccctcgc gccgattctg
     1201 atgggtcgat cgaaccggat tgcggggttc ttcgcgaacc gcctcccgaa gtcggtccgc
     1261 ttcggcgccg agctcgtcaa gaggacgttg aagaccgtca tcatgccgaa cttcttgccc
     1321 atctaccgcc gcaagcggct cttccaagcg tccatgatct tctatgccgc atggatcatc
     1381 gacctgacgg tgacaacagg tgaggcccac ctcgcgatgt cgctcctcac ccccatcctc
     1441 gtgctcgcgg tatgggcgtc tgcccgccac gcgttccgtg agcccgtgcg ccacacaaat
     1501 tacggcgtgg acaccggccc attcagtcgg tcgacaatcg agacgtttgt cctgcggatc
     1561 gtggtcggcg cgctggccat cgtcgggctc gtggcaatcg tgtggcagta ctattggccc
     1621 ttgacgctcg tcatcctcta tgcgtacttc ctcgtcgtgg tcttcagcat gaaagtcgtc
     1681 taccgccgcc tgggcctggg catcacccga cgggtggccc gcgtccgcct ggtgcgtcac
     1741 atgccggcgg cgcggagttg gcgggccgcg agtggcgtcc gccgctgatc agacgacggg
     1801 gtaggtgagg tcgctgatcc acgtctcgtc gcccatcgtc g
//
LOCUS       DATLMA010000108         4124 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_311625, whole genome shotgun sequence.
ACCESSION   DATLMA010000108 DATLMA010000000
VERSION     DATLMA010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311625"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..741)
                     /locus_tag="VNA10_01300"
     CDS             complement(<1..741)
                     /locus_tag="VNA10_01300"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG36345.1"
                     /translation="MFAIEIPGAARLAGFASRKLTAFFNLGPGDVRNLSFLYFATFIM
                     RAAAFAGVAVMQDVMHSLDPLWRGVLFAVYPLAEIATVGYLGALCDRIGRKRILVFAH
                     LVTAAAVFLFILSIGVDPGVRPYLVAVFFAMFGIGAAAKVASTLAMINDHSNRRNRAQ
                     LMAFFDLVTFGGLVAGFGAAFLALHAFGVADAVVLAVGGLGVTVSVIMVQFLVQETPF
                     APDLQRGTIDLLRTVLRNKDIQRLLPVYI"
     gene            1021..1956
                     /locus_tag="VNA10_01305"
     CDS             1021..1956
                     /locus_tag="VNA10_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36346.1"
                     /translation="MGQPYNPNAPVQQVRPPSMPQSMKCSSCGAPLTPGSGLALVVCE
                     YCGAVTTMGAGGAAEVIQKHYMLENKLSNEAALEAGGKWLNKGVLRRKVAERSDLGQV
                     TLRYVPYWIVPTSVVADFQGTKNVGAGAGTGMMMHGDTGAKKAAGAALFALTMAAAAA
                     GSQNRNQQVNTQPQVVRVRDRIQMQYNIPIVAVRGYTKYQPDDGFQFQLQSKMNFDKR
                     QTGGVDVQSGDVTEAEAKSQAAALSHKFAEKQAKTRVDNLESIQVYPTTYDGELLHAP
                     VWFMEYAHKGKQMFIVIDGSSGSVIEGERPSFSLW"
     gene            2043..2567
                     /locus_tag="VNA10_01310"
     CDS             2043..2567
                     /locus_tag="VNA10_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36347.1"
                     /translation="MPDIRDRVEQDRGLLKKIQLVIPGYAGYRRREDIRAADNLLRIQ
                     LANQLKGVRGDLETIRDQMAMDGKIQGLQGIGNIIFTVEGLEAKVRHAEGGYSGISAT
                     IQIKETELDKLYEYDYAMLDSLDKAAAVVPMIQDAADPKSFDASLKACREAVAAFETA
                     WKNRMMAVTGIQVR"
     gene            2572..3756
                     /locus_tag="VNA10_01315"
     CDS             2572..3756
                     /locus_tag="VNA10_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HVG36348.1"
                     /translation="MIPISFFFGGARRTDQTAGRKEGLVGAMTVAWDDQFKRQNIMWK
                     VPRNIRMNDNIVVREDEIAVFYRDGKVLAYLDRPDRYALTSQNVAVLGKLIQALSGVV
                     QQAEVYYLQKRIFDGKFGTQDAFLFQDPDFDMVQLRAFGDFRYRMKDPETFINQFVGT
                     FGAATSAEVEDRIKDEIVKQLNVTLGKMKANGLKVVDFAASLNDIEQGVLANSKPHFA
                     TLGIEILQISGLSIPLPDAIKDALEKMASAKVLGRTSAAAYQQFALADSMKAAAANPS
                     GGAGTGIGLGAGIGLGYGMASQVPGMIAQQPQQQTQQRPCPKCGTMNAVTTKFCGNCG
                     ADTTIAAGSKPCIKCGKMVGPGQKFCPECGASQTLKCPDGHDVPGNMKFCPECGKPVV
                     QS"
     gene            3797..>4124
                     /locus_tag="VNA10_01320"
     CDS             3797..>4124
                     /locus_tag="VNA10_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36349.1"
                     /translation="MPKLSTTVLLAMGAIGTIVLVAIFAYILFVAPALRIDERLWWTG
                     LTSMIFAFGFYMMFAATHDRMIARPLAGGFFVVGAGSFYGSIFTGNSSDFAKLLYLIL
                     LSILVMI"
BASE COUNT          831 a         1323 c         1335 g          635 t
ORIGIN      
        1 gatgtaaacc ggaaggagcc gctggatgtc tttgttccgc agcacggtgc gcagtaggtc
       61 gatcgtcccc cgttggagat ccggggcgaa gggcgtctcc tggacgagga actggaccat
      121 gatgacgctc accgtcaccc cgagcccgcc gaccgcgagg acgaccgcgt cggcgacccc
      181 gaatgcatgg agggccaaga acgccgcccc gaagcccgcg accaggcccc caaaagtcac
      241 gaggtcgaag aacgccatga gctgcgcccg gttcctccgg ttcgaatggt cgttgatcat
      301 cgcgagggtc gaggcgacct tcgccgccgc gccgatcccg aacatcgcga agaagacggc
      361 gacgagatac ggccgcacgc ccggatcgac gccgatgctc aggatgaaca ggaagaccgc
      421 ggcggcggtc acgagatgtg cgaagacgag gatccgcttg cgcccgatgc gatcgcacaa
      481 cgcgccgagg tagccgaccg tcgcgatctc ggcgagcgga tagaccgcga agaggacgcc
      541 ccgccacagc gggtccagcg agtgcatcac gtcctgcatc accgcgaccc cggcgaacgc
      601 ggcggcccgc atgatgaacg tcgcgaaata caggaacgaa aggttccgga cgtcccccgg
      661 gccgaggttg aagaatgccg tcagcttgcg gctcgcgaat ccggccaatc gtgcggcccc
      721 cgggatctca atcgcgaaca cgggctccgg cggaataggt ttgcggtccg gttcgcaccg
      781 acgcgccgga gttaccgacc cgaagactca gatggaaatt cttaagtaag gcaaggatgc
      841 ctcgtccttc gaataggagg tctccccctg ttctgcaaca catgcggtgg acgtatcgcg
      901 gacggatcgg tgttctgtaa cctttgcggc gccaagctcg gtgtcgttgc cacggcgcca
      961 gtggcgcctg gggtcccccc ggctccgggc tatcccggtc aggcccctgg cgggacgccg
     1021 atgggccagc cgtacaaccc caacgccccc gtccagcagg tccgtccccc gtcgatgcca
     1081 caatccatga agtgtagctc gtgcggcgcg cccctgaccc ccgggtccgg tctcgccctg
     1141 gtcgtgtgcg agtattgcgg tgccgtgacg acgatgggcg ccggcggcgc ggcggaagtc
     1201 atccagaagc actacatgtt ggaaaacaaa ctctcgaacg aggccgccct cgaggcaggc
     1261 gggaaatggc tgaacaaggg cgtcttgcga cggaaagtcg ccgagcgctc ggacctcggt
     1321 caggtcacgt tgcgctacgt gccgtattgg atcgtcccga catccgtcgt tgcggacttc
     1381 caagggacga agaacgtcgg cgcgggcgcg ggaaccggca tgatgatgca cggcgacacc
     1441 ggcgcaaaga aggccgcggg cgccgcgttg ttcgcgttga ccatggcggc tgccgccgca
     1501 ggctctcaga accggaatca gcaggtcaac acgcaaccgc aggtcgtccg cgtacgggac
     1561 cggatccaga tgcagtacaa catcccgatc gtcgccgtgc ggggatacac gaagtatcag
     1621 ccagacgatg ggttccagtt ccaactgcag agcaagatga acttcgacaa gcgccagacc
     1681 ggcggcgtcg acgtgcagag cggcgacgtc accgaggcgg aggcgaagtc ccaggccgcg
     1741 gcgctctcgc acaagttcgc ggagaagcag gcgaagacgc gcgtggacaa cttggaatcg
     1801 atccaggtct acccgacgac ctacgatggc gagttgctcc atgccccggt gtggttcatg
     1861 gagtacgcgc acaaggggaa gcagatgttc atcgtcatcg acggatcgtc cggtagcgtg
     1921 atcgaaggcg agcgtccgtc gttctccttg tggtgaacgc ggaacgccct cggacttcca
     1981 tccatacccc taaatacata tccaggcaaa acataaggcg aatcgctcgg agaaaaccga
     2041 ccatgcccga tatccgcgac cgcgttgaac aagaccgagg actgctcaag aagattcagc
     2101 tcgtgatccc cggctacgcc ggctaccggc gccgagagga catccgcgcc gcagacaacc
     2161 tgctccggat ccagctcgcg aaccagctga agggcgtccg cggagacctc gaaaccatcc
     2221 gagaccagat ggcgatggac ggaaagatcc agggcctcca gggcatcggc aacatcatct
     2281 tcacggtcga aggcctcgag gcgaaggtcc gccacgcgga gggcgggtac tccggcatca
     2341 gcgcgacgat ccagatcaaa gagacggaac tcgacaagtt gtacgagtac gactacgcga
     2401 tgctcgactc cctcgacaag gccgctgcgg tcgtcccgat gatccaggac gccgccgacc
     2461 cgaagagctt cgacgcgtcg ctgaaggcgt gccgcgaggc cgtcgcggcg ttcgagacgg
     2521 catggaagaa ccggatgatg gccgtgaccg gcattcaggt gaggtgagac gatgatcccg
     2581 atttcgttct tcttcggcgg cgcgcggcgg acggaccaga cggcgggccg gaaggaaggc
     2641 ctcgtcggcg cgatgacggt cgcatgggac gaccagttca agcgacagaa catcatgtgg
     2701 aaggtcccgc ggaacatccg gatgaacgac aacatcgtag tccgggagga cgagatcgcg
     2761 gtcttctacc gcgacgggaa ggtcctcgca tacctggacc gcccggaccg gtacgccctc
     2821 acgtcgcaga acgtcgccgt cctgggaaaa ctcatccagg ccctgtctgg cgtcgtccag
     2881 caagcggagg tgtactacct ccagaagcga atcttcgacg ggaagttcgg cacccaagac
     2941 gcgttcctgt tccaggaccc cgacttcgac atggtgcagc tccgcgcgtt cggggacttc
     3001 cggtaccgca tgaaagaccc ggagacgttc atcaaccagt tcgtcgggac gttcggcgcc
     3061 gccacctcgg cggaggtcga ggaccgcatc aaggacgaga tcgtcaagca gctcaacgtg
     3121 accttgggca agatgaaggc caacgggctg aaggtcgtcg acttcgcggc aagcctcaac
     3181 gacatcgaac agggtgtgct ggccaattcg aagccgcact ttgcgacact cggaatcgag
     3241 attctccaga ttagcggatt gagcatcccg ctcccggacg cgatcaagga cgcgctcgag
     3301 aagatggcgt cggcgaaggt gctcggccgc acgagcgcgg ccgcgtacca gcagttcgcc
     3361 ctggccgact cgatgaaggc cgccgcggcg aatccgtccg gcggcgccgg cacgggcatc
     3421 ggcctcggcg ccgggatcgg cctcggatac gggatggcct cgcaggtgcc cgggatgatc
     3481 gcccagcagc cccagcagca gactcagcag aggccgtgcc cgaaatgcgg cacgatgaac
     3541 gccgtgacga cgaagttctg cgggaactgc ggagccgaca cgacgatcgc cgcgggcagc
     3601 aagccgtgca tcaagtgcgg caagatggtc gggcctggac agaaattctg tccggagtgc
     3661 ggcgcgtctc agaccctgaa gtgcccggac ggccacgatg tccccggaaa catgaagttc
     3721 tgcccggagt gcggcaagcc ggttgtccag agctgatccc atggagcaac ccccggcccc
     3781 tccgagcggg cccaccgtgc ccaagctgtc gacgacggtc ctcctcgcga tgggcgcgat
     3841 cgggaccatc gtcctcgtgg cgatcttcgc gtacatcctg ttcgtcgcgc cggccctccg
     3901 gatcgacgag cgcctctggt ggaccggact cacgtcgatg atctttgcct tcgggttcta
     3961 catgatgttc gcggccaccc atgaccggat gatcgcgcgc cccttggcgg gcggcttctt
     4021 cgtcgtcggc gcgggcagct tctacggctc gatcttcacg ggcaactcat ccgacttcgc
     4081 gaagctgctg tacctgatcc tcctctcgat cctcgtgatg atcg
//
LOCUS       DATLMA010000109         4064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_734361, whole genome shotgun sequence.
ACCESSION   DATLMA010000109 DATLMA010000000
VERSION     DATLMA010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734361"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1231)
                     /locus_tag="VNA10_01325"
     CDS             complement(<1..1231)
                     /locus_tag="VNA10_01325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HVG36350.1"
                     /translation="MDAKRLLTFVGVGLIVIGTLAAAVAVAGPTPRTNAARTGAGFPV
                     RMRAGARGTLPAANNFYPTGVEYDSAKGEVFVADAAWDNVSVISDATNAIVANVRVGA
                     NPFGLAYDSVKGEVFVSNQVSNNVSVISDSTNAVVVASIRAGSSPQWEAYDSGRGEVF
                     LANALSNNVTIMSDATNVVVANITVASYPAGVAYDGAVGEVFVADAFSNVVSVISDTT
                     NTVVATIGVGSGPFGAAYDSGAGEVFVANQASNTVSVMSDATNTVVATIDVGSYPTGV
                     AYDSANGEVFVSNQMSNNVSVISDATNAVVATVDVGAYPFGLAYDSGRGEVFVANANS
                     NNVSVISDATKSVVATIAIGPVPPTYPVSFTETGLPTGTSWSVTLDGSAQSSTTNTIA
                     FSKGNGTYSYAIGGIQGY"
     gene            complement(1477..1989)
                     /locus_tag="VNA10_01330"
     CDS             complement(1477..1989)
                     /locus_tag="VNA10_01330"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HVG36351.1"
                     /translation="MRRALIALVVAAAVAIAGVASYVYMYEGSIDVAVQDDSGAWAHV
                     WVTFTQVWVHEAGKSEDVGWHNLTVAQSSIDLASLVNVSELLASARVGPGKYTEIRLV
                     VIAATGRMLDGTNVVFNVPSGDVKAVTPFEIRSGATTRLTVDVNLARSIVMNGTGWTF
                     TPVIGQITAA"
     gene            complement(2114..2791)
                     /locus_tag="VNA10_01335"
     CDS             complement(2114..2791)
                     /locus_tag="VNA10_01335"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HVG36352.1"
                     /translation="MRLAVLSDVHSNLPALQSVLADVDRIAPDGIWVAGDLVGYNPWP
                     NEVLEILRERHVRAIRGNHDRGAIGGDTSWFNELAAEGVRWTRIHLAPAGVGYLKDLE
                     DRTRGAMPEGLVAMYHGSPRNDDEYIFPWAADESIVRAAGAPFVILGHTHLPMVNRFR
                     SGLLVNPGSVGQPRDGNARAAWGVLDLTRHSFEVRRVSYDVDAVATEIRKAGLPHELA
                     DRLYGGV"
     gene            3156..3275
                     /locus_tag="VNA10_01340"
     CDS             3156..3275
                     /locus_tag="VNA10_01340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CxxC-x17-CxxC domain-containing protein"
                     /protein_id="HVG36353.1"
                     /translation="MFDAVCADCGQATQVPFKPDPARPVYCRDCFAKRRPRRF"
     gene            3466..>4064
                     /locus_tag="VNA10_01345"
     CDS             3466..>4064
                     /locus_tag="VNA10_01345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HVG36354.1"
                     /translation="MDRIQVAKGVDATRDFALFLRDERAFVISDLHLGFEGALAEQGV
                     SIPRFQRRVVLERLGKMLDRGKAEKVIIAGDFKHEFSKNLVDEWVEVKQVLRFLKDRV
                     TPVLVRGNHDNYLATILGDLNLTLNPRADVGGYTIVHGHEEVSTLHPIIMGHEHPAVK
                     LKDELGAVVSVPAFLVTERLMVLPAFSPLALGVDVSSYP"
BASE COUNT          740 a         1327 c         1268 g          729 t
ORIGIN      
        1 cataaccttg gattccgccg atcgcgtacg aatatgttcc gttgcccttg gagaaggcaa
       61 tcgtgttcgt tgttgagctt tgggcggacc catcaagggt gacggaccac gacgtgccgg
      121 tcggaagccc ggtctccgtg aagctcaccg gatacgtcgg gggaacgggg ccgatcgcga
      181 tcgtcgcgac gacactcttt gtcgcatcgg aaatcacgct cacgttgttc gagttcgcgt
      241 tcgcgacgaa cacctcgccc cttccgctgt cgtacgccaa tccgaacggg taagcaccga
      301 cgtcgaccgt cgccacgacc gcgttcgtcg cgtcggatat cacgctcacg ttgttcgaca
      361 tctggttcga cacgaacacc tccccgttcg cgctgtcgta agctacgccg gtcgggtagg
      421 aacccacgtc gatggtcgcg accacggtgt tcgtagcgtc cgacatgaca ctcaccgtgt
      481 tcgatgcctg atttgcgacg aacacctcac ccgccccgct atcgtaggcc gctccgaacg
      541 gtccgctgcc gaccccgatc gtcgcgacga cagtgttcgt cgtgtccgaa atcacgctca
      601 ccacgttcga gaatgcgtcc gccacgaata cttcgcccac cgcgccgtcg taggcgaccc
      661 cggcaggata cgaagcaacc gtgatgttcg cgaccacgac gttcgtcgca tccgacatga
      721 tggtcacgtt attcgataag gcgttcgcga ggaacacttc gcctctcccg ctgtcgtagg
      781 cctcccactg cggggaggaa cccgcccgga tgctcgcaac gacgacggcg ttcgtcgagt
      841 cggagatcac gctgacgttg ttcgacacct gattcgacac gaacacttcg cctttcacgc
      901 tgtcgtaggc caatccgaac ggatttgcgc ccacccggac gttcgcgacg atggcgttgg
      961 tcgcgtcgga gatcacactc acgttgtccc aggcggcgtc ggcaacgaac acctctccct
     1021 tcgcgctgtc gtactcgacg cccgtcggat agaaattgtt cgccgccggg agagtccccc
     1081 tcgcgccggc gcgcatccga accggaaacc ccgctcccgt ccgggcggcg ttggtccgcg
     1141 gcgtcggacc cgctacggcg accgccgcgg ccagcgtgcc gatcacaatc agtccaactc
     1201 cgacgaaagt cagcaggcgc ttcgcgtcca tcgcccctca ccccacagcc gagaaaggaa
     1261 ggagaggcgt ggaacggtcc aggaacccaa aaaggtacct tcccgggtgc gactcccggg
     1321 caggatttgg atcgctcccg cggcaattca cggcacggag aggcctgagg gagtgtccgt
     1381 cgagtggagc gcgtttgatt ccttcgcctg tggcccccgg cctgtccgct cggcaaatga
     1441 aaatgaagag ggacctgcgt ggatgcaggt cccggttcac gcggccgtga tctggccgat
     1501 caccggcgtg aaggtccagc ccgttccgtt catgacgatc gaacgcgcca ggttcacgtc
     1561 gacggtgagc ctcgtcgtgg ccccggagcg gatctcgaac ggggtgacgg ccttcacgtc
     1621 cccggagggc acgttgaaga cgacattcgt tccatcgagc atgcgtcccg tcgcagcgat
     1681 cacgacgagc cggatctccg tgtacttgcc cggcccgacc cgcgcgctcg cgagcagctc
     1741 ggacacgttc acgagggacg ccagatcgat cgacgactga gccacggtca ggttgtgcca
     1801 gccgacgtct tcggacttgc cggcctcgtg gacccacacc tgggtgaagg tcacccagac
     1861 atgcgcccac gcgccggagt cgtcctgaac cgcgacgtcg atgctgccct cgtacatgta
     1921 gacgtacgaa gcaacgccgg cgatcgcgac ggcggcggcg accacgagtg cgatcagagc
     1981 acgtcgcata cccatccacc tcacgaccgc ctggggctgg gaggtcgata aagattcttg
     2041 aacggacgtc gaaaatctac gccggtgaac gtgcctcgaa agggcaacga tgcacatccc
     2101 tgtgcgccga ggctcacacc ccgccgtaca ggcggtccgc gagttcgtgg ggcaagccgg
     2161 ccttgcggat ctccgtggcg accgcgtcga cgtcatagga gacgcggcgc acctcgaagg
     2221 agtgcctcgt gagatcgagg acgccccacg cggcccgggc attcccgtcg cgcggctgcc
     2281 ccaccgaacc gggattcacg aggagtccgg accggaatcg gttgaccatc gggaggtgcg
     2341 tgtggcccag gatgacgaac ggcgcgccag ccgcgcggac gattgattcg tcggcggccc
     2401 aggggaagat gtactcgtcg tcgttccgcg ggctcccgtg gtacatggcc acgaggccct
     2461 cgggcatcgc gccccgcgtc cggtcctcga ggtccttcag atacccgacg cccgcggggg
     2521 cgagatgaat ccgcgtccag cggacgccct cggctgcgag ttcgttgaac catgacgtgt
     2581 cgccgccgat cgccccgcga tcgtggtttc ctcgaatcgc tctaacatgc cgctcgcgca
     2641 ggatctcgag cacctcgttg ggccatggat tgtacccgac gaggtcgccc gcaacccaga
     2701 ttccgtccgg ggcgatgcga tcgacgtccg cgagcaccga ttgcagggca ggcaggttcg
     2761 agtggacatc ggagaggacc gcgagtcgca cagtgcgacc aaacgaactc ggtgtatatc
     2821 agcttctcaa ccgtgcgaga atttcacctg gccatggggg catggcgggg aggttccgac
     2881 agtcaacctt gaacaaggtt aacatcattt agagactgac gatccggacc aaatggcctc
     2941 ggcccatgtg gtcgcggcgt ggttcatcaa tttcggccgg tggaccccgg ttcccgtcaa
     3001 ttcatgggtt ggtcctgtag tgcacagctt taagagccgg gggccctctc ggcgggttgt
     3061 ccggcccaca agggacggat agtaggtaag taatggacga agacagaggc ggaagacgag
     3121 gcggcggagg cggctacgac cgcggcccgc gtcaaatgtt tgacgcggtg tgcgcggact
     3181 gtggccaagc cacgcaagtc ccgtttaagc cggaccccgc gaggcccgtc tactgccgag
     3241 attgtttcgc aaagcgccgg ccgcgacggt tctaaatcga aaacggcaca gtgcgttcga
     3301 acccttttcc gttcgagctc ccaacccgcc gtgcggctgg cgcggagctc gtttttactt
     3361 ctcatcgctt gtgagcggac gcgccgattc ggcatggcca cgaccgcgct ctgcggaccc
     3421 aatcgtggtg aatccttatc gcgttccatc gccttcgacc gattcgtgga ccgcatccag
     3481 gtcgcgaagg gcgtcgatgc gacccgggac ttcgcgctct tcctgcgcga cgagcgggcc
     3541 ttcgtcattt cggatcttca cctcggattc gagggggcgc tcgcggagca aggcgtctcg
     3601 atcccgcgct tccagcgacg cgtcgtcctc gagcgactgg gcaagatgct cgaccgcggc
     3661 aaagcggaga aggtcatcat cgcgggggac ttcaagcacg agttctcgaa gaacctcgtc
     3721 gacgagtggg tcgaggtgaa gcaagtgttg cgtttcctga aagatcgcgt gacgccggtg
     3781 ctcgtccgag ggaaccacga caactatctc gcgacaattc tcggggatct gaatctcacc
     3841 ctcaacccgc gcgcagacgt cggcggctac acgatcgtcc acgggcacga agaggtctcg
     3901 acgctccatc cgatcatcat ggggcacgag catccggccg tgaagttgaa ggacgaactc
     3961 ggcgcggtcg tgagcgtgcc cgcgttcttg gtgacggagc gcctgatggt cctgcccgcg
     4021 ttcagcccgc tcgctctcgg cgtcgacgtg tcatcgtatc ccta
//
LOCUS       DATLMA010000110         1729 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_673494, whole genome shotgun sequence.
ACCESSION   DATLMA010000110 DATLMA010000000
VERSION     DATLMA010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673494"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VNA10_01350"
     CDS             complement(<1..454)
                     /locus_tag="VNA10_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36355.1"
                     /translation="MAQSTQRNYAQTEDQDRRGSDRDEAKRMLDGMDEKKKSSTTATL
                     DSIKKRYFTRLLGDKGIKVKSPKVSSVEETSLGKITTIPKIVQRNMNEIEIQPILKNF
                     SYVRILYDTMANEYFYEAIEPKLIQEESELLDVLKEILVENLEMLDDAD"
     gene            complement(464..1384)
                     /locus_tag="VNA10_01355"
     CDS             complement(464..1384)
                     /locus_tag="VNA10_01355"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HVG36356.1"
                     /translation="MTKVELEKARLRRTEKGDRRKSVVGAGSALFVLFGFIAFLNLIN
                     SVNLAFRPTQGPVERFLYWLVVATLGFIGPYGFYVAKLQREIKLIERRLPDFLRDVAE
                     AGRFGMTLAEAIVVSSGGRYGKLTPEIKKMAAQITWGVPATEALRLFAERVKTPMVGR
                     VVAIIVKSSDAGGDVADVLTMVSHDTKENQLTEDERRIAMSTYIAVIYISFMVFLVTI
                     WILDVTFLPKMLEASGALAATGGVVQSPLAQDLPGVVNQIRIAFFIATVVHGLGDGIL
                     AGVLDTGKIPNGLRHSFIMLVIALFAFLFI"
     gene            complement(1386..>1729)
                     /locus_tag="VNA10_01360"
     CDS             complement(1386..>1729)
                     /locus_tag="VNA10_01360"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HVG36357.1"
                     /translation="SAKFSDFLQGVVTTSTSGGQLKPYFLVKAEQFEKEDRLEMRKKM
                     ETLGMLAESFVTVVVAFPLFLVVIMAIMALISKTGSGFVVLLLYVVVALMIPMSQFGF
                     IFVIWNMEQEG"
BASE COUNT          309 a          552 c          528 g          340 t
ORIGIN      
        1 ggtccgcgtc gtccaacatc tcgaggttct cgacgaggat ctccttgagg acatcgagga
       61 gttccgactc ctcctggatg agcttcggct cgatcgcctc gtagaagtac tcgttcgcca
      121 tcgtgtcgta caggatccgg acgtacgaga agttcttcag gatcggctgg atctcgatct
      181 cgttcatgtt tcgctggacg atcttcggga tcgtcgtgat cttgccgagg ctcgtctcct
      241 cgacactgct caccttcggc gacttgacct tgatgccctt gtccccgagg agtcgggtga
      301 agtagcgctt cttgatcgaa tcgagcgtcg cggtggtgct gctcttcttc ttctcgtcca
      361 tgccgtcgag catgcgcttc gcttcgtccc ggtcggagcc cctccggtcc tggtcctccg
      421 tctgcgcgta attccgctgc gtggattggg ccattcggtc acctcagatg aacaggaacg
      481 cgaacagggc gatcacgagc atgatgaagc tgtgccgcag cccgttcggg atcttcccgg
      541 tgtccaggac gcccgcgagg atgccgtccc cgaggccgtg cacgaccgtc gcgatgaaga
      601 acgcgatccg gatctggttg acgaccccgg ggaggtcttg ggccagcggg ctctggacga
      661 cgccgcccgt ggcggcgagc gcgccgctcg cctcgagcat cttcggaagg aacgtcacgt
      721 cgaggatcca gatcgtgacg aggaacacca tgaacgagat gtaaatcacc gcgatgtacg
      781 tcgacatcgc gatccggcgc tcgtcctcgg tcagctggtt ctccttcgtg tcgtggctga
      841 ccatcgtcag gacgtcggcg acgtcgcctc ccgcatcgga ggacttgacg atgatcgcga
      901 cgacccgccc gaccatcggg gtcttcacgc gctccgcgaa gaggcgcagc gcctccgtgg
      961 cggggacacc ccaggtgatc tgggccgcca ttttcttgat ttccggcgtg agcttcccgt
     1021 agcggcctcc ggacgagacg acgatcgcct cggccagggt catgccgaac cgcccggcct
     1081 ccgcgacatc gcggaggaag tccggaagcc tgcgctcgat cagcttgatc tcgcgctgaa
     1141 gcttcgccac gtagaatccg tacggcccga tgaacccaag cgtcgcgacg acgagccagt
     1201 agaggaatcg ctccacggga ccttgggtgg gtcggaacgc gaggttcacc gagttgatca
     1261 ggttcaggaa ggcgatgaac ccgaagagga cgaacagggc cgaccccgcg ccaacgacgc
     1321 tcttgcggcg gtctcccttc tcggtccggc gcagacgggc cttctcgagc tcgaccttcg
     1381 tcatctcagc cctcctgttc catgttccag atcacgaaga tgaacccgaa ctggctcatc
     1441 gggatcatga gcgcgacgac gacgtacaag aggaggacga cgaacccgga acccgtcttg
     1501 ctgatcagcg ccatgatggc catgatcacg acgaggaaca gggggaacgc gacgacgacc
     1561 gtcacgaacg actctgcgag catcccgagg gtctccatct tcttccgcat ctcgaggcgg
     1621 tcttccttct cgaactgctc cgccttcacg aggaagtacg gcttaagctg tcctccgctc
     1681 gtggacgtcg tgacgactcc ttgcaggaag tccgagaact tagcggacg
//
LOCUS       DATLMA010000111         1621 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_70714, whole genome shotgun sequence.
ACCESSION   DATLMA010000111 DATLMA010000000
VERSION     DATLMA010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70714"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..1221
                     /locus_tag="VNA10_01365"
     CDS             250..1221
                     /locus_tag="VNA10_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36358.1"
                     /translation="MQSSGTQSVTREAPVHLEGLGKDYGHFTALKSLELTVPQGTSFG
                     FLGPNGAGKSTTIKLMTNLIRPSRGRAALFGIDVRQEPTRALARIGAVIETPEFYGYL
                     SPLETLAYVGRLRGMPKSEIERRSDAVLKEVKLTDWADHRIQEFSKGMKQRLAIAQAL
                     LNEPELLILDEPTSGLDPRGMAEVRDVIKALKGEGRTIFMSSHLLGEVQEVCDDVALL
                     NHGELLIHGSVRELSRGADTSTFQTTFLHPPTPQALEALASVPGVVEVKADGESTVDL
                     RISGGEDGQARVLEAMVSRGLKVITYRPLGSSLEQLYLDRIQESDRL"
     gene            1218..>1621
                     /locus_tag="VNA10_01370"
     CDS             1218..>1621
                     /locus_tag="VNA10_01370"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HVG36359.1"
                     /translation="MTTSAIAQVVTVTSYEIRKYFRGRRLLGILILVGLIIGLFLGLP
                     PALGASYPSTPNAFVSTFATFTGLLVVLSGVLFAADALVSEHEKRTGYFLFPNPVRRE
                     VLVLGKIAASLIVSAAVISLYYGAAATAALIVT"
BASE COUNT          292 a          552 c          479 g          298 t
ORIGIN      
        1 gctcgcggcg tacagcagcc accgcatcgg aacgatcaac gacttgacgc ccggaggagc
       61 ttccgatctc gtcatacccg gcccgcgatg cggggaacgg ttcggaccat aagaaacccg
      121 ctggaccacc gttcggccgt cggactcctt tccacctcgg tctgtgtcca tcggtggact
      181 cgcaatcgga catctgtctt cggaatccct tcaaagagtt taagtatatc gcgatatatc
      241 gcgatgtcca tgcaatcctc cggcacgcaa tcggtcaccc gcgaagcccc ggttcacctg
      301 gaggggctgg gcaaggacta tggtcacttc accgccctga agtccctcga actgacggtc
      361 ccgcaaggca catccttcgg gttcctcggc ccgaatggcg cggggaagtc cacgacgatc
      421 aagctgatga cgaacctgat ccgaccctcc cgcggccgcg cggctctgtt cggcattgat
      481 gtccgtcagg agccgacccg ggctctcgcc cgcatcggcg ccgtgattga gaccccggag
      541 ttctacggat acctgtcgcc gctcgagacg ctcgcgtacg tgggacgcct ccgtggtatg
      601 ccgaagagcg agattgaacg ccgcagcgac gccgtcctca aggaagtcaa gctgaccgac
      661 tgggcggacc accggatcca ggaattctcg aaggggatga agcagcgcct cgcgattgcg
      721 caagcgctcc tgaacgagcc ggaactcctc atcctcgatg agcccacgtc cggattggat
      781 ccgcggggga tggccgaggt ccgtgatgtg atcaaggcgc tcaagggaga aggccgcacg
      841 atcttcatga gctcccacct cctcggcgag gtccaagaag tctgcgacga cgtcgcgctg
      901 ctgaaccacg gggagctcct gatccatggc tccgtgcggg agctgtcgcg gggcgcggac
      961 acctcaacat tccagacgac cttcctccat ccaccgacgc cgcaagcgct cgaagccctc
     1021 gcaagcgtcc cgggggtcgt cgaggtcaag gctgacggcg aatcgacggt cgacttacgg
     1081 atttctggcg gcgaggacgg tcaagcgcgc gtcctcgagg cgatggtctc ccgcggcctg
     1141 aaggtcatca cgtaccggcc gctcggctcg tccctcgagc aactgtatct cgaccgcatc
     1201 caggagtcgg atcgtctatg accaccagcg ccatcgctca ggtagtcacc gtcacgagct
     1261 acgagattcg caagtacttc cgaggccgac gcctcttggg aatcctcatc ctcgtcgggc
     1321 tgatcatcgg attgttcctc gggctcccgc cagcactcgg agcttcctat ccctcgaccc
     1381 cgaacgcgtt cgtctcgacg ttcgccacgt tcactggcct cctcgtggtg ctcagcggcg
     1441 tcctctttgc cgcggacgcc ctcgtatcgg agcacgagaa acggaccggc tacttcctgt
     1501 tcccgaatcc ggtccgacgg gaggtcctcg tcctcggaaa gatcgccgcc agcttgatcg
     1561 tgtcggccgc cgtcatctcg ctgtattacg gcgccgcggc gacggccgca ctcatcgtca
     1621 c
//
LOCUS       DATLMA010000112         1416 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_734464, whole genome shotgun sequence.
ACCESSION   DATLMA010000112 DATLMA010000000
VERSION     DATLMA010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734464"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..683)
                     /locus_tag="VNA10_01375"
     CDS             complement(147..683)
                     /locus_tag="VNA10_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36360.1"
                     /translation="MPGKASVTRSVRIEKDADERLRQLAEQGDTSVNTLVNRALRKFV
                     EWDAYGEKFGFITLPSAMLVKLMDCLSDEEARELGVWAGKNLVKEYITFWFKEVTAET
                     LLEGFPKLLAKYGRAFAFEDLEEGDRRTIILKHGSGAKWSTFYEEAIRTAFREHLGRD
                     VKVDKSENQVVVRLRLYE"
     gene            1078..>1416
                     /locus_tag="VNA10_01380"
     CDS             1078..>1416
                     /locus_tag="VNA10_01380"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG36361.1"
                     /translation="MVLLPALNEAMAVGSVIERIPMEALRSSGYDVYVWVVDGRSVDA
                     TPEVAKERGASIYVQSGAGKGNGVRQALDHLMNDRSRHHIAAPRVYVMLDADGTYPPE
                     AIPEFVEALES"
BASE COUNT          239 a          456 c          437 g          284 t
ORIGIN      
        1 accccctcgc ggtccccgaa ctttcgcagg aagtcgtcga cgtcccgctc gattcggatc
       61 gttcgagtta cgctgctgct cgggggcaac ccactcctcc tgaccggaga gccagcacgc
      121 gaaggaacgt caaactacct aatcctctat tcgtacagcc ggaggcgcac gacgacctgg
      181 ttctccgatt tgtcaacctt cacgtctcgc ccgagatgct ctcggaatgc tgtgcggatt
      241 gcctcctcgt agaacgtgga ccacttggcg ccgctcccgt gtttgaggat gatcgtccgc
      301 cggtctccct cttcgagatc ctcgaaggcg aatgcacggc cgtacttcgc cagcaacttc
      361 gggaagcctt cgagcagggt ctccgccgtg acctccttga accagaacgt gatgtattcc
      421 ttcaccaggt tcttccccgc ccacacaccg agctcgcgcg cttcctcgtc gctgaggcag
      481 tccatgagct tgaccagcat ggccgagggc agcgtgatga acccgaactt ctcgccgtag
      541 gcgtcccatt cgacgaattt ccgaagggcg cggttgacga gtgtgtttac gctggtatcc
      601 ccttgttcgg cgagttgccg caggcgctcg tccgcgtcct tttcgatgcg gaccgacctc
      661 gtgacgctcg cttttccggg catagacctc ccgtgcctca aacgttctga gacatcgttc
      721 tttgtgttct tagatgttct tttgcaatca ctccgacggc gcgcgacaca ggccgcggcg
      781 ccggttccgg tccgaaacgt accgctattg accctcggag atgcatgggt cgggggagga
      841 gtgaggatga tgttgggaag gggccgaggc gtcaaggacc gccgaccccg tcccctgtgg
      901 gtccgaccgc ggctccgacg gacgctcctc ggaccgacct ttccgatgac caggtcggga
      961 gggacccttc gcacacgtcc ggacggaggc gggatcttcg ggggttcccg acctcgcatc
     1021 gacggtcgcg agccgggcgg gcacccggct ccgggcgatg tccggacgcg aagcatcgtg
     1081 gtcctgctcc cggccctcaa tgaggcgatg gccgtgggct ccgtgatcga acggatcccg
     1141 atggaagcac ttcggtcttc cgggtatgac gtatacgtct gggtcgtgga tgggcggtcc
     1201 gtggatgcga ccccggaggt cgcgaaggag cgcggggcca gcatctatgt ccagagcggc
     1261 gccggaaagg ggaacggggt ccgacaagcc ctcgatcacc tgatgaacga tcggagccgc
     1321 catcacatcg ccgcaccccg agtgtatgtc atgctcgatg cggatgggac ctatcctccg
     1381 gaagcgattc cggaatttgt cgaggccctc gaatcc
//
LOCUS       DATLMA010000113         1597 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_190899, whole genome shotgun sequence.
ACCESSION   DATLMA010000113 DATLMA010000000
VERSION     DATLMA010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190899"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1043
                     /locus_tag="VNA10_01385"
     CDS             <1..1043
                     /locus_tag="VNA10_01385"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG36362.1"
                     /translation="FVEDTKLPFDHKWVGREVKGAKIFSPNGTELTIEEAHAGNEVGI
                     VLERDAFDKAVAKEAAKEGADIWLKTTATAVIKDDGWVRGIRAKRLEEEMNIEAKCVV
                     AADGYESQVGRWAGFKTLLKAGDITGTLQYRLTNISKGHDFPDYCEFWLGTCAPAGYI
                     WVFPKDESTANVGIGVSLDRLKNRVDIKGYLDRWIEQDPRMAHAQPLDMVTGGVSTAP
                     PIKKSVGNGMALVGDAARMIDPITGGGIGNGMLAGMMLGKVLAKCNQTGDFGEAALME
                     YEKGWRAKLEENLYRNWLAKNKLVTLSDGEFDDIIQVLASVGVTKLSVRAILKVLKET
                     RPELVAKFAEFI"
     gene            complement(1066..>1597)
                     /locus_tag="VNA10_01390"
     CDS             complement(1066..>1597)
                     /locus_tag="VNA10_01390"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36363.1"
                     /translation="GMTSICAEYRTRRFFKLLATTKLSKAEWLAAKVVFYVLLLFLSV
                     AIMMLVGIGVFGMKARLTPVAVLLIIAGAFEFTSLGMVLGIFVRDPGTGEALANAIGF
                     PMMFLAGSFFPIDSMPSFLQTIARALPLTYINEGLRATMVLANDATAVTYLLITLGFA
                     VVFFVVGARGLSWKSK"
BASE COUNT          353 a          468 c          522 g          254 t
ORIGIN      
        1 acttcgtcga agatacgaaa ctgccgttcg accacaagtg ggtcggccgc gaggtcaagg
       61 gcgcgaagat cttctcgccg aacggcacgg agctgacgat tgaggaggcc cacgccggca
      121 acgaagttgg gatcgtcctt gaacgggacg cgttcgacaa ggccgtggcg aaggaagccg
      181 cgaaggaggg cgcggacatc tggctcaaga cgaccgcgac cgcggtcatc aaggacgacg
      241 ggtgggtccg cgggatccgg gccaagcgcc tcgaggaaga gatgaacatc gaggcgaaat
      301 gcgtcgtcgc cgcagacggc tacgaaagcc aagtgggccg ttgggcggga ttcaagaccc
      361 ttctgaaggc aggggacatc accggcacgt tgcagtatcg actcacgaac atctctaaag
      421 gccacgattt ccccgattat tgcgaattct ggctcggcac atgcgctccg gcggggtaca
      481 tctgggtgtt cccgaaggac gaatccactg cgaacgtcgg catcggcgtc tccctggatc
      541 gcctcaagaa ccgcgtggac atcaagggct acctcgaccg atggatcgaa caagatccga
      601 ggatggccca tgcgcagccg ctcgatatgg tcacgggagg cgtttcgacc gcgccgccga
      661 tcaagaagtc cgtgggcaac ggcatggcgc tggtcggcga cgccgcgagg atgattgacc
      721 cgatcaccgg cggaggcatt ggaaacggca tgctcgccgg catgatgctc gggaaggttc
      781 tcgccaagtg caaccagacc ggagacttcg gcgaggccgc cttgatggag tacgaaaagg
      841 ggtggcgggc gaagctggag gaaaacctct accggaactg gctcgcgaag aacaagctgg
      901 tcaccctgtc ggacggagag ttcgacgaca tcattcaagt ccttgcttcc gtcggcgtga
      961 ccaagctgag cgtccgtgca atcctgaagg tcctgaagga gacgcgtccc gagctcgtcg
     1021 cgaagttcgc ggagttcatc tgaggcgtct gcgtcggccc ggaagtcatt tggacttcca
     1081 cgagaggccg cgtgccccga ccacgaagaa cacgaccgcg aatcccagag tgatgagcag
     1141 gtaggtgacc gccgtcgcgt cgttcgccaa gaccatcgtg gcccgcaatc cttcgttgat
     1201 atacgttaac ggcagggccc gcgcgatcgt ctggaggaag gatggcatcg aatcgattgg
     1261 gaagaacgag cccgcgagga acatcatcgg gaacccgatc gcgttcgcga gcgcctcgcc
     1321 ggttccggga tcgcgcacga agatgccgag gaccatcccg agcgaggtga actcgaaggc
     1381 gcctgcgatg atcaggagga ccgccaccgg ggtcagtcgg gccttcatcc cgaacacgcc
     1441 gattccgacg agcatcatga tcgccacgga gaggaagagc agcaacacgt agaagacgac
     1501 cttcgccgcg agccactccg ccttactgag ttttgtcgtc gcgaggagct tgaagaatct
     1561 ccgcgtccgg tactccgcac agatcgacgt catcccg
//
LOCUS       DATLMA010000114         3458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_854394, whole genome shotgun sequence.
ACCESSION   DATLMA010000114 DATLMA010000000
VERSION     DATLMA010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3458
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854394"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VNA10_01395"
     CDS             complement(<1..325)
                     /locus_tag="VNA10_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36364.1"
                     /translation="MSTFWRTFKVAAWLGWEMDSNWTEPWLFIIYSIVKPIAAVFILV
                     LMYVVFAAIGNVRPQPLFDFMYVGNAFFIFVGATLFGTFQVIQSDREWYQTIRYVYIS
                     PISFYV"
     gene            complement(322..1269)
                     /locus_tag="VNA10_01400"
     CDS             complement(322..1269)
                     /locus_tag="VNA10_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013559123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36365.1"
                     /translation="MREATVRRSDLRFRLGLNLRSVVGRAYPRVIGANREPSWLIFEV
                     FLPLLGIAAYVFIYQAFYQAQAAAICPSPCTPTPAQLLALHQAGQNLNALVATVVLGG
                     TMVAFWLNVLWSMASQLYWEKEIGNLQLYMMAPMNRMALLGGMAIGGMFMTSVRALST
                     LVAGIVVFGVIFSVANPFLVLAVFFVTLIALYGMGMMFASLYLLWGREAWNLSALMEE
                     PIFFSSGMYFPAGGLFSVPTWGPAVAIAGSIVPATFGLDALRQLTLPGTAPLPLLPPV
                     TELEILLVLAVVFLILARFTLAYLETLAKREGKLTSRHQ"
     gene            complement(1266..2276)
                     /locus_tag="VNA10_01405"
     CDS             complement(1266..2276)
                     /locus_tag="VNA10_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020470770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36366.1"
                     /translation="MPYAVETRDLTRIFAGKRHWLRKPDPDEVERGVGPTTALGGVTM
                     QIPEGELFGLLGPNGAGKTTLIKILCTLLLPTAGEAFVAGHDVTKDVFPIRQRIGMVS
                     GGETTGYGLLTARENVWMFSQFYGVPSKVAKERIDGLMKVFGLWDRRDAKVRTLSTGQ
                     RQKMNMVRGFATDPDILFLDEPTLGLDVNAARIIRDYVMKWLKENKGKTVLLTTHYMA
                     EADEMCDRIAIIDNGKILACDTPENLKRTARMDTTFQLEVDALRNLDGFTAIPGVKNF
                     SSKNDIGTNMTHLTFILDGEAPVADILSHIMSQGSKVHSLQKSEPTLEDVFIRMVGRG
                     FE"
     gene            complement(2325..2516)
                     /locus_tag="VNA10_01410"
     CDS             complement(2325..2516)
                     /locus_tag="VNA10_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008442617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17e"
                     /protein_id="HVG36367.1"
                     /translation="MGNIRPTYIKRVAIELAKLYPNEFTDDFEHNKAKVSELTDVRSI
                     LMRNRIAGYVTRYRQRLAV"
     gene            2723..2887
                     /locus_tag="VNA10_01415"
     CDS             2723..2887
                     /locus_tag="VNA10_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015503948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36368.1"
                     /translation="MEESLVNVEFLKSSNNFIARIQSELGGMREYRSSSFEEVLEQVV
                     IDLQEEFESY"
     gene            complement(2888..>3458)
                     /locus_tag="VNA10_01420"
     CDS             complement(2888..>3458)
                     /locus_tag="VNA10_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014126928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HVG36369.1"
                     /translation="ANLTGLEMQRFSEMGRRLGDTMAACNKPIIAAINGFALGGGCEL
                     ALACDIRIASDRAELGQPEVTIGIIPGFGGSQRLPRLVGLGWAAEMIYTGDRISAATA
                     ERIGLVNRVVPPDRLLAEAKALAHKILEKSPAAIALAKACLRAAWDMPLSAGLDFETA
                     AFGIVGSTRDKAEGMRAFIEKRKPAWTGA"
BASE COUNT          640 a         1112 c         1116 g          590 t
ORIGIN      
        1 acacgtagaa ggagatcggt gagatgtaca cgtaccggat cgtctgatac cactcccggt
       61 cggactggat aacctggaac gttccgaaca gcgtcgcgcc gacgaagatg aagaacgcgt
      121 tcccgacgta catgaagtcg aacaacggct gggggcggac gttcccaatc gcggcgaaga
      181 cgacgtacat gaggacgagg atgaagaccg cggcgatcgg cttgacgatc gagtagatga
      241 tgaagagcca cggctcggtc cagttggagt ccatctccca gccgagccag gccgcgacct
      301 tgaaggtcct ccagaacgtg ctcactgatg ccgtgatgtc aacttcccct ccctcttcgc
      361 gagggtctcg agataggcga gcgtgaagcg cgcgaggatg aggaacacca cggccaggac
      421 gagcaagatc tccaattccg tcaccggcgg aaggagcggc agcggcgcgg tccccggcaa
      481 cgtgagctgg cgcaacgcat ccagcccgaa ggtcgcgggg acgatgctcc ccgcaatcgc
      541 gacggcggga ccccatgtgg ggacggagaa cagcccgccc gcggggaagt acatcccgct
      601 cgagaagaaa atcggctcct ccatgagggc cgagaggttc cacgcctcgc gaccccagag
      661 gagatacagc gaggcgaaca tcatccccat cccgtagagc gcgatgagcg tcacgaagaa
      721 cacggcgagc accaggaacg ggttcgccac ggagaagatg acgccgaaca cgacgatgcc
      781 ggccaccagg gtcgacagcg cccgcacgga cgtcatgaac atcccgccga tcgccatgcc
      841 gccgaggagc gccatccggt tcatcggggc catcatgtag agttgcaggt tcccgatctc
      901 cttctcccag tacagctggc tcgccatcga ccagaggacg ttgagccaga acgcgaccat
      961 cgtcccgccg aggacgaccg tcgccacgag ggcgttcagg ttttggcccg cctggtggag
     1021 cgcgaggagc tgggccggcg tcggcgtgca gggactcggg cagatcgccg cggcctgcgc
     1081 ctggtagaac gcctggtaaa tgaacacgta cgccgcgatc ccgaggagcg ggaggaagac
     1141 ttcgaagatc aaccaggacg gctcgcggtt cgccccgatc acgcgcgggt acgcgcggcc
     1201 gacgacgctc cggaggttga ggccgagacg gaaccggagg tccgaacgcc ggacggtggc
     1261 ctccctcact cgaatcccct cccgaccatc cggatgaaga cgtcttcgag ggtcggctcc
     1321 gacttctgga gggaatggac cttcgatccc tgggacatga tgtggctcag gatgtccgcg
     1381 acgggcgcct cgccgtcgag gatgaacgtg aggtgcgtca tgttcgtccc gatatcgttc
     1441 ttcgaggaga agttcttcac gccggggatg gcggtgaacc cgtccaggtt gcggagcgcg
     1501 tcgacctcga gctggaacgt cgtgtccatc cgcgccgtcc gcttgaggtt ctccggggtg
     1561 tcgcaggcga ggatcttgcc gttgtcgatg atcgcgatcc gatcgcacat ctcatcggcc
     1621 tcggccatgt agtgcgtcgt cagcaggacc gtcttcccct tgttctcttt gagccacttc
     1681 atgacgtaat cccggatgat ccgggcggca ttcacgtcga ggcccagcgt gggctcatcg
     1741 agaaacagga tgtccgggtc cgtcgcgaag ccgcggacca tgttcatctt ctgccgctga
     1801 ccggtggaca gcgtccggac tttcgcatct cgacggtccc acaggccgaa cactttcatc
     1861 aggccgtcga tccgttcctt cgcgaccttg ctcgggacgc cgtagaactg ggagaacatc
     1921 cagacgttct cgcgggcggt cagcaggccg tacccggtcg tctcgccgcc ggacaccatg
     1981 ccgatccgct gacggatcgg gaagacgtcc ttcgtcacgt cgtgtcccgc gacaaacgcc
     2041 tcgccggctg tcggcaggag gagcgtgcac aggatcttga tgagcgtcgt tttcccggcg
     2101 ccgttcgggc cgaggagccc gaacagttcg ccctccggga tctgcatcgt caccccgccg
     2161 agggccgtcg tcggaccgac ccctcgctcg acctcgtcag ggtcgggctt tcggagccaa
     2221 tgccgctttc cggcgaagat tcgggtgagg tcgcgcgtct cgaccgcgta gggcatgggg
     2281 gatcgattcc gattctcctc ggaccacgcg gaaggtcgga gggcctacac ggccagtcgc
     2341 tgccggtatc gggtgacgta tccggcgatc cggtttcgca tcaggatgct ccgcacgtcg
     2401 gtaagctccg agacctttgc cttgttgtgc tcgaagtcat ccgtgaactc gttcggatag
     2461 agctttgcga gttcgatcgc gacgcgcttg atgtacgtcg gccggatatt acccaacgat
     2521 tcactccgct cagtacgagg aagcgctcca aagggcgtgt gctaaataaa ggttcggagg
     2581 agaaccgcga cacgatctcg tttcacgccg cgggtggcgc gccgttcgcg tccgcgccat
     2641 tatgcgggca actcttaaat agggacctcg gatacgcccg attgggaccc cgcgccgcac
     2701 cgtcccccag gagcggatga cgatggaaga atccctcgtg aacgtcgaat tcctgaagag
     2761 ctcaaacaat ttcatcgctc gcatccagag tgaactcggc ggcatgcggg agtaccgcag
     2821 ctcctcgttc gaagaagtcc tcgagcaggt cgtgatcgac ttgcaagagg agttcgagtc
     2881 gtactgatca ggcgccggtc cacgccggct tccgtttctc gatgaaggcg cgcatccctt
     2941 ccgccttgtc ccgggtcgag ccaacgatcc cgaaggccgc cgtctcgaag tccaacccgg
     3001 cggagagcgg catgtcccac gccgctcgga ggcacgcctt cgccagggcg atcgcggcag
     3061 ggctcttctc caagatcttg tgggccaagg ctttcgcctc cgcgaggagg cggtccgggg
     3121 gcacgacccg gttcaccagc ccgatccgct ccgcggtcgc ggccgagatc cggtcgccgg
     3181 tgtagatcat ctccgccgcc cagcccagcc cgacgagacg cgggagacgt tggctcccgc
     3241 cgaagccggg gatgatgccg atggtcactt ccggctggcc gagctccgcg cggtccgagg
     3301 cgatccggat gtcgcatgcg agcgcgagct cgcagccgcc gccgagcgcg aagccgttga
     3361 tcgccgcgat gatcggcttg ttgcatgccg ccatcgtgtc gccgagccgc cggcccatct
     3421 ccgaaaagcg ctgcatctcg aggccggtca ggttcgcc
//
LOCUS       DATLMA010000115         1952 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_191133, whole genome shotgun sequence.
ACCESSION   DATLMA010000115 DATLMA010000000
VERSION     DATLMA010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191133"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VNA10_01425"
     CDS             complement(<1..187)
                     /locus_tag="VNA10_01425"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HVG36370.1"
                     /translation="MFPPFRWMMHRRRGLRPWIISILANAPKNGAEIMDEIETMTQGW
                     WRPSPGSVYPLLDQLKQE"
     gene            312..713
                     /locus_tag="VNA10_01430"
     CDS             312..713
                     /locus_tag="VNA10_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HVG36371.1"
                     /translation="MASMQADHDWNRHRRLIGWGIAGLLLLIGVAIVIGVVVRAIVGP
                     SAGSGYFPFFFFPFGFFIFVFFLFFLFRGFLWGWGGWGWRGYPMYGRYGYGYHDGAAE
                     ILRRRYASGEITKVQFDQMMRDITQSRNPPQ"
     gene            complement(738..1214)
                     /locus_tag="VNA10_01435"
     CDS             complement(738..1214)
                     /locus_tag="VNA10_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36372.1"
                     /translation="MSLSSNVSHRWFLIAVFAAIGMVIATSFVLFSLQPPRAPPTGNL
                     IFTSASIVNGNASFVVQNVSRGPYVYSGFTFRLVVNNFAVGPVALGPNGSATAVRVGT
                     STDRISWIDADGDGAVSVGDSFLINGDRAPLSSLSDYEFDLQWGSVWAARVFWSTY"
     gene            1390..>1952
                     /locus_tag="VNA10_01440"
     CDS             1390..>1952
                     /locus_tag="VNA10_01440"
                     /inference="COORDINATES: protein motif:HMM:NF012893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HVG36373.1"
                     /translation="MPTSPKSAPDLLASSRVDVSQVYRDLHTGPEGLSASDADSRLRE
                     FGPNELPSARKPGVLDKISIQLRNLFNVLLLVASALSFVTGLVYGDSGSVQMGFAILG
                     VVLFNIAFSILQERRAEKAVEALRRLIPANAKVLRGGSIVQIPVVKLVPGDVFSFDEG
                     DRVPADARLITSFGVSVDQSILTGESV"
BASE COUNT          376 a          608 c          583 g          385 t
ORIGIN      
        1 cctcctgctt cagttggtcc agcagcggat agacggagcc cggagatggc ctccaccatc
       61 cttgggtcat cgtctcgatc tcgtccatga tctcggcgcc gttcttcggt gcgttcgcga
      121 ggatcgaaat aatccacggg cgcaggcctc tccggcgatg catcatccaa cgaaacgggg
      181 ggaacatggg cttcgagaat cgtatcggat aaccgatatt taccctttac catccgaatc
      241 ggtttttcgg tatcggaaat ccgatatgcg taaataccgc ccatgcaata caactcgcgg
      301 tggcatccac catggcaagc atgcaagcag atcatgactg gaatcggcat cgtaggctca
      361 tcggttgggg gatcgcaggg ctccttctcc tgatcggcgt cgcaattgtg atcggagtcg
      421 tcgtccgggc gatcgtcggg cccagcgcgg gatccgggta cttcccgttc ttcttcttcc
      481 cgttcgggtt cttcatcttc gtcttcttcc tgttcttcct gttccgcggc tttctctggg
      541 gctggggcgg atggggctgg cggggctacc cgatgtacgg acgctacggg tacgggtacc
      601 atgacggcgc ggccgagatc ctccgccggc ggtatgcgag cggcgaaatc acgaaggttc
      661 agttcgacca gatgatgcgg gacatcacgc aaagccgaaa cccgcctcaa taggcgacca
      721 caacaaaggc ggctcgctca gtacgtcgac cagaatacgc gagccgccca cacacttccc
      781 cattgcaggt caaactcgta atcgctcaac gaggacagcg gcgcacgatc cccgttgatg
      841 aggaacgagt cgcccacgct cacggcgccg tcgccatcgg catcgatcca cgaaatccga
      901 tcggtcgaag tccccacccg cactgccgtg gcggagccgt tcggcccgag tgccaccggc
      961 ccgactgcga agttgttcac gacaagtcga aacgtgaacc ctgagtagac gtaggggccg
     1021 cgcgacacat tctggacgac gaaggaagcg ttaccattga cgattgatgc cgaagtgaaa
     1081 atgagatttc ccgtcggcgg ggctcgaggc ggttgaaggg agaaaaggac gaacgaggtc
     1141 gcgatcacca tcccgatcgc tgcgaagacg gcgatgagaa accaccgatg ggagacgttg
     1201 gatgagagcg acaccggacc gtacgctgcg catccgcggc ttaagccttc gtggggtttc
     1261 tcaggggacc tttatatcga accgggcgag tcgcccgggc acttcgcggc tgtggatcag
     1321 tgaatcgcac ctcggaaacc gaccgcacac gtggccccga tgtaatccgc ggacgaagga
     1381 gcaaagacga tgccgacctc cccgaagagt gcgccagacc tgctcgcttc gagtcgcgtc
     1441 gacgtctcac aagtctaccg cgatctccac accggaccgg aaggtctctc cgcctcggat
     1501 gccgattccc gccttcgtga gttcggcccg aacgagctgc cgtccgcccg gaagcccggc
     1561 gtcttggaca agatttcgat ccagctccgg aacctgttca acgtcctcct cctcgtggct
     1621 tccgctctgt ccttcgtgac gggactcgtc tatggagatt ccggttccgt ccagatgggg
     1681 ttcgcgatcc tcggcgtcgt gctgttcaac atcgcgttca gcatcctcca ggaacgccgg
     1741 gccgagaagg cggtcgaggc gcttcgtcga ctcatccccg cgaacgcgaa ggtcctccgc
     1801 ggcggttcga tcgtccagat cccggtcgtg aagctcgtcc ccggagacgt gttcagtttc
     1861 gacgagggcg atcgggtgcc cgcggatgcg cgcctcatca catcgtttgg tgtctccgtc
     1921 gaccaatcga tcctgaccgg ggaatcggtg tt
//
LOCUS       DATLMA010000116         1922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_555766, whole genome shotgun sequence.
ACCESSION   DATLMA010000116 DATLMA010000000
VERSION     DATLMA010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555766"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..121
                     /locus_tag="VNA10_01445"
     CDS             <1..121
                     /locus_tag="VNA10_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008335417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HVG36374.1"
                     /translation="ADTTAFMYLGHLIERGATRELFERPKEALTESYITGRFG"
     gene            121..825
                     /gene="phoU"
                     /locus_tag="VNA10_01450"
     CDS             121..825
                     /gene="phoU"
                     /locus_tag="VNA10_01450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HVG36375.1"
                     /translation="MPQAAERKALQKGLTKLNENMVTLAELSELAIRKAIDSLTRLDG
                     DVAREVFTIDQEVYGLQLEIEHTCVDLIALHAPVARDLRTITTSLKITTDLDRIGRYA
                     KDLGELTLQFSPSAHGAEPELARIREMADRTIQMVDTAIDAFVKHDAESVRNIMQVDD
                     VVDRMHDENFNELVRRMTEGSLKIETGARYILVNRYLERIADHAVNIGMRVVYMVTGD
                     WLPRERAADRAKRIPK"
     gene            complement(1194..1607)
                     /locus_tag="VNA10_01455"
     CDS             complement(1194..1607)
                     /locus_tag="VNA10_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36376.1"
                     /translation="MVYVRDDGVFDASIEKIWKYIQDPESHQHESILSQKVLEQKGNT
                     MKIRAEIAGPQGKAEEIWQMRMDPPFGFELQVLEGPTKGTKQTHTYVPMGNKTKVIVA
                     GDFHRQGASDEETRKGALAYFEQVFTEDSAALKDF"
BASE COUNT          395 a          576 c          582 g          369 t
ORIGIN      
        1 ggcggatacg acggctttca tgtacttggg tcatctcatc gagcgaggcg cgacgcgcga
       61 gctcttcgaa aggcccaaag aggcgttgac ggaaagctac atcaccggga ggttcggata
      121 gtgccgcagg ccgcagaacg aaaggcgttg cagaaggggc tcacgaagct gaacgagaac
      181 atggtgacgc tcgcggaact cagcgaactg gcgattcgca aagcgatcga ctcgctgacc
      241 cgtctggatg gagatgtcgc acgagaggta ttcaccatcg accaggaggt ctacgggctc
      301 cagctcgaga tcgaacatac gtgcgtcgac ctcatcgccc tccacgcgcc cgtcgcgcgg
      361 gacctccgga cgatcacgac gtccctgaag attacgacgg acctggaccg gatcggacgg
      421 tatgcgaagg acctggggga gctcaccctg caattcagtc cctccgccca cggcgcggaa
      481 ccggagctcg cgcggatccg ggagatggcg gatcggacga ttcagatggt cgacacggcg
      541 atcgatgcgt tcgtgaagca tgacgcggaa tcggttcgga acatcatgca ggtcgacgat
      601 gtcgtggacc ggatgcacga cgaaaacttc aatgaactcg tgcgacggat gacggaagga
      661 tccttgaaga tcgaaaccgg cgcgaggtac atcctggtga accgctacct cgagcggatc
      721 gcggaccatg cggtgaacat tggcatgcgc gtcgtctaca tggtcacagg agattggctt
      781 ccgcgggagc gagccgccga ccgagcgaag cgaatcccga agtgagtcgt ccaggcgatg
      841 cctctataga cctcggatac gacccgagac cccttcggtc aggttcatcc tcagccttgc
      901 gccttcacga tccgatgaga gaaacacacg aagaggtcgt cgatcaagac ttcgacctat
      961 ggaagctcga tcgagacgca caagaggaaa cccaccaggc ggaattcgcg cagaagtgac
     1021 ggagcgagtt cagcgctcgg aggcggatcg tcacctcgac gaatcgcttc ttataccctt
     1081 tttcgatcca agggtggaaa gttgcccatg ggctccgcgg tggacggtga ccacgaggac
     1141 gtggtcgcta tcctcgagcg ggccatgggc ggtgcgaagg ggcgcggttc gtcctagaag
     1201 tccttcaggg ccgcgctgtc ctcggtgaac acctgctcga aatacgcgag ggcgcccttc
     1261 cgggtctcct cgtcgctcgc gccttggcga tggaagtccc cggccacgat gaccttcgtc
     1321 ttgttgccca tcggcacata ggtatgggtc tgcttcgtgc ccttcgtcgg accttccaag
     1381 acctggagct cgaacccgaa tggcgggtcc atccgcatct gccagatctc ttccgccttg
     1441 ccttgcgggc cagcgatctc ggcccggatc ttcatcgtgt tccctttctg ctccaggacc
     1501 ttctggctca ggatcgactc atgctgatgg ctctcgggat cctggatata cttccaaatc
     1561 ttctcgatcg aggcgtcgaa gacgccgtcg tctctcacgt ataccatgcg tatctcttct
     1621 gggacgcaga cgacgtcccg gcgtccctat acttagtata ctatttgaat gcgccaggga
     1681 aggggagtat atcgcgcgcc tttggaatgc gcgtttcagt ccaactgcaa gaccagactc
     1741 gcgtcgaata ggtcctcgtc cgaggagact cggcggcgca tgcgcgttcg acccatgaaa
     1801 caacgttccc ggcacattac gccgggatgc cggatttcca ggttgcgtcc tcaacggtct
     1861 caacgggctg agcatccgtc tcgcccccga gcacgtcggg attcacgcgg ataatctcgc
     1921 cc
//
LOCUS       DATLMA010000117         1181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_431961, whole genome shotgun sequence.
ACCESSION   DATLMA010000117 DATLMA010000000
VERSION     DATLMA010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431961"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VNA10_01460"
     CDS             <1..543
                     /locus_tag="VNA10_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013932331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HVG36377.1"
                     /translation="VRMADVIVINKVDTATPENIEIVKQNVRSVNPDVVVVEAASPIT
                     PDDSVQIRGKKVLAIEDGPTLTHGGMEYGAAYIAAQRFGAAEIVSAVNYAVGSIKETY
                     KKYPNSRKILPAMGYGPKQIKELEETIDATPCDLVLSGTPIDLSRVLKTRKPVVHVRY
                     ELDEIGHPNLEDVLKDWELI"
     gene            complement(550..858)
                     /locus_tag="VNA10_01465"
     CDS             complement(550..858)
                     /locus_tag="VNA10_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36378.1"
                     /translation="MVGLTGTLLLFGAIAVAIIVPFVIVPEILERRGHNPRSGLVRAI
                     AWVTFLAIVLIPAAFSGLLISVANPADWLIFLVAMTVAILYDYYRLNPEKVPRLRSRT
                     "
     gene            945..>1181
                     /locus_tag="VNA10_01470"
     CDS             945..>1181
                     /locus_tag="VNA10_01470"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HVG36379.1"
                     /translation="MKLAVIGAGEMGHGVAELAALHGHDVRLRDIKKEYIDRGMERIR
                     WSLGKLVDKKQITQEQADQALGRIHATIELREACQ"
BASE COUNT          269 a          348 c          389 g          175 t
ORIGIN      
        1 gtccggatgg cggacgtgat cgtgatcaac aaggtcgata ccgcgactcc ggagaacatc
       61 gagatcgtga agcagaacgt ccggagcgtg aatccggacg tggtcgtcgt cgaggcggcc
      121 tcgcccatca cgccggacga cagcgtgcag atccgcggga agaaggtcct cgccatcgag
      181 gacggcccga ccctcacgca tggcggcatg gaatacggcg cggcctacat cgccgcccag
      241 cggttcggcg ccgcggagat cgtgagcgcc gtgaattacg cggtcggctc gattaaggag
      301 acgtacaaga agtatccgaa ctcccgcaag atcctgcccg ccatgggcta cggcccgaag
      361 cagatcaaag agctcgagga gacgatcgac gcgacaccgt gcgacctcgt gctgagcggc
      421 acgccaatcg acctgagccg cgtgttgaaa acgaggaaac ccgtcgtcca cgtacggtat
      481 gagctcgacg agatcggcca tccgaacctt gaggacgtcc tcaaggactg ggagctcatc
      541 tgagccggat caggtccggg acctcagccg ggggaccttc tccggattga ggcggtagta
      601 gtcgtacagg atcgcgacgg tcatcgctac caggaagatc agccagtccg cggggttcgc
      661 gaccgagatg agaagaccgc tgaacgccgc cgggatcaga acgatggcca gaaaggtcac
      721 ccatgcgatt gcacgaacga gaccgctccg cggattgtgc ccgcgtcgtt cgaggatctc
      781 cgggacgatg acgaacggca cgatgattgc aacggcaatc gccccgaaca ggagcagagt
      841 accggtgagt ccaaccacgg atggatgata gggccgttcg gacaagaagg tttttgcacc
      901 acacctttaa ctccgcgcca tccatccttg ggtcgagagc ggcgatgaaa ctcgcggtca
      961 tcggcgcggg ggagatgggc cacggcgtcg cggagctggc ggctctgcac ggccacgacg
     1021 tccgtctgcg ggacatcaag aaggaataca tcgaccgagg gatggaacgg atccgctggt
     1081 cgctcggcaa gctcgtggac aagaagcaga tcactcagga acaagcggac caggccctcg
     1141 gacggatcca tgcgaccatc gagttgcggg aagcatgtca g
//
LOCUS       DATLMA010000118         1450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_71229, whole genome shotgun sequence.
ACCESSION   DATLMA010000118 DATLMA010000000
VERSION     DATLMA010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71229"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1244
                     /locus_tag="VNA10_01475"
     CDS             <1..1244
                     /locus_tag="VNA10_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36380.1"
                     /translation="KGETTHRWATFLPDGRHFLYMAGTHAAGTGSEMNVIYLASLDSK
                     DRTLLLHARSNVAFASGYLIYVLEKTLLAQPFDANRLRLTGEPVPLGDSVLYDPDYFR
                     AAFSASDNGVLVYAAGTGGSKVRLAWYDRSGKPIGVPFGDPIDYRDFSISPDGKRLAA
                     EVQDSTTGMGDIWLSDFARGTRTRFSFGPGPSMCPVWSPDGTRIAFARMEKTLLTSIV
                     AKPLSGGGGEETLLRSSGDICPKSWSPDGRYLAYDTLAAVATTKSDIWILPLFGDRKP
                     FPFLATQFDELSPQFSPDGRWVLYRSDESGRPELYVAPFPGPGSKWQISAGGALGGDW
                     LQGGKEITYLTLDLKQVSVEVKADSGFETGVPRVLFNASNATSLRSDPSGDRELMTVL
                     PETAQNTPITLVSNWPATLKK"
     gene            complement(1249..>1450)
                     /locus_tag="VNA10_01480"
     CDS             complement(1249..>1450)
                     /locus_tag="VNA10_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003985229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proline dehydrogenase"
                     /protein_id="HVG36381.1"
                     /translation="DGGGLPPREVEFQMLYGIQRSEQERLAARGHRFRVLISYGEAWF
                     AWYMRRLAERPANVLFVLKSLF"
BASE COUNT          260 a          482 c          439 g          269 t
ORIGIN      
        1 cgaaagggga gacgacacac cgctgggcga cgtttcttcc ggatggccgc cacttcctct
       61 acatggccgg aacgcacgcg gccggcaccg gaagcgagat gaacgtgatc tacctggcgt
      121 ccctcgactc gaaagatcga acgcttcttc ttcacgcccg atcgaacgtc gccttcgcct
      181 ccggctacct gatctacgtg ctcgagaaga cgctcctcgc tcagcccttc gacgcgaacc
      241 gccttcgtct gaccggcgaa ccggttccgc tcggcgactc ggttctctac gatcccgatt
      301 atttccgggc ggccttttcc gcttcggaca acggggtcct ggtctatgcg gcgggcaccg
      361 gcggctcgaa ggtgcgcctc gcgtggtacg accgatcagg aaagccgatc ggcgtgccgt
      421 tcggcgatcc gattgattat cgggatttct cgatctctcc cgacggaaag cgcctggccg
      481 cggaagtcca ggattcgacc acgggaatgg gcgacatctg gctctccgac ttcgcccgcg
      541 gcacccggac gcgtttcagt ttcggcccgg gtccatcgat gtgtccggtc tggtctccgg
      601 acggaacccg gatcgcattc gcccggatgg agaaaactct tctcacgagt atcgtcgcga
      661 agccgttgag cggcggcggc ggagaggaga cgctccttcg gagcagcggc gatatctgtc
      721 caaaatcgtg gtcgccggac gggcgctatc tcgcttacga cactctcgca gcggttgcca
      781 cgacaaagtc cgacatctgg atcctgccgc tcttcggcga tcgcaaaccg ttcccgtttc
      841 tcgcaacaca attcgacgaa ttgtcgccgc agttctctcc tgacggacgg tgggtcctgt
      901 acaggtccga cgagtccggg aggcccgagc tctacgtcgc gccctttccc gggccgggca
      961 gcaaatggca gatttccgcc gggggagccc tgggcggcga ttggctccag ggcggcaagg
     1021 agattaccta tctcacactc gatctgaagc aggtgtccgt ggaggtcaaa gccgactccg
     1081 gattcgaaac cggcgtcccg agagtgcttt tcaacgcgag caatgcgacc tctctccgga
     1141 gcgacccgag cggcgatcgc gagctgatga cggttcttcc ggaaacggcg caaaacacgc
     1201 cgatcaccct cgtttcgaac tggccagcta cgctgaagaa gtgatcccct agaaaaggct
     1261 cttcaggacg aagaggacgt tcgcggggcg ttcggcgagg cgccgcatgt accacgcgaa
     1321 ccacgcctcg ccgtagctga tcagcacgcg gaaccggtga ccgcgggcgg ccagccgctc
     1381 ctgctctgac cgctggatcc cgtacagcat ctggaactcc acctcccgcg gcgggagccc
     1441 tcctccgtcc
//
LOCUS       DATLMA010000119         1256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_674341, whole genome shotgun sequence.
ACCESSION   DATLMA010000119 DATLMA010000000
VERSION     DATLMA010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_674341"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VNA10_01485"
     CDS             complement(<1..203)
                     /locus_tag="VNA10_01485"
                     /inference="COORDINATES: protein motif:HMM:NF014366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36382.1"
                     /translation="MSAPRVERPGLYYPKLPTTWWLKNPRYFRFMIREVTSVFIAIFL
                     VVLLVQLYQLSRGPEAYAACVARL"
     gene            complement(200..946)
                     /gene="sdhB"
                     /locus_tag="VNA10_01490"
     CDS             complement(200..946)
                     /gene="sdhB"
                     /locus_tag="VNA10_01490"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HVG36383.1"
                     /translation="MAERDVVFRVKRYRPTSGSKPTYQEYRIPYRDDMVVLDGLNYIK
                     DHVDPTLTYRWSCRMGICGSCGANVNGQPKLTCGTYIRDVHRGTVTIDPLANFPILKD
                     LVVDFDDFLEKLASVTPYIVREESGDLTKEFVQYPEDVEAYRQQSLCINCMLCYAACP
                     VFGTSPEFVGPAASALALRYIRDTRDEGADQRLARLNTKAGVWECTFVGECSVVCPKG
                     VDPAAAIQRSKVAGAKDWFTSVLMPWGGRS"
     gene            complement(948..>1256)
                     /locus_tag="VNA10_01495"
     CDS             complement(948..>1256)
                     /locus_tag="VNA10_01495"
                     /inference="COORDINATES: protein motif:HMM:NF014907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36384.1"
                     /translation="CAKLAKLRDRFGSVGMADKDRVFNTEMTGVLELDFMLDVAASIA
                     HSALNRRESRGAHSRTDFPNRDDANYLKHTLAYRTDGAPRIDYSPVKITKWEPVERKY
                     "
BASE COUNT          211 a          412 c          405 g          228 t
ORIGIN      
        1 agccgcgcca cgcacgcggc ataggcctcg ggcccgcgcg agagctgata gagctggacg
       61 agcaggacca cgaggaagat cgcgatgaac acgctggtga cttctcggat catgaagcga
      121 aagtaccgcg ggttcttgag ccaccaggtc gtcggcaact tcgggtagta gaggccaggc
      181 cgctcgacgc gcggcgcgct cacgaccgtc ctccccaggg catcagcacg gaggtgaacc
      241 agtccttggc gcccgccacc ttcgagcgct ggatggcggc ggcggggtcg acgcccttcg
      301 gacacacgac cgagcactcc ccgacgaagg tgcactccca gacaccggcc ttcgtgttca
      361 gccgcgcaag acgttggtcg gccccttcgt cccgcgtgtc ccggatgtac cgcagcgcca
      421 gcgccgatgc cgcgggcccg acgaactccg ggctcgtgcc gaagaccggg caagccgcgt
      481 agcacagcat gcaattgatg cacaggcttt gctgccggta ggcctcgacg tcctccgggt
      541 actgtacgaa ctctttcgtc aggtcgcccg actcctcgcg gacgatgtac ggcgtcacgg
      601 acgcgagctt ctccaggaaa tcgtcgaagt ccacgacgag gtccttcagg atcgggaagt
      661 tcgcgagggg atcaatcgtc acggtgcccc tgtggacgtc gcgaatgtac gtgccgcacg
      721 tgagcttcgg ttggccgttc acgttcgcgc cgcacgagcc gcagatcccc atccggcacg
      781 accatcggta ggtcagcgtg gggtcgacgt ggtccttgat gtaattcagt ccgtcgagga
      841 cgaccatgtc gtcgcggtac gggatccggt attcctgata cgtcggcttg gatcccgacg
      901 tcggtcggta ccgtttcacc cggaacacga cgtcccgctc ggccatctca atacttcctc
      961 tcgacgggct cccacttcgt gatcttcacc ggtgaataat cgatgcgcgg tgcgccgtcg
     1021 gtgcgatatg cgagcgtgtg cttcaggtag ttcgcgtcgt cgcggttcgg gaagtccgtc
     1081 cggctgtgcg cgcctcggga ctcccgtcgg ttgagcgcgc tgtgggcgat cgacgccgcg
     1141 acgtcgagca tgaagtcgag ttcgagcacc ccggtcatct ccgtgttgaa gacacggtcc
     1201 ttgtccgcca tcccgacgct cccgaagcga tcgcggagct tggcgagctt cgcgca
//
LOCUS       DATLMA010000120         2576 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_132187, whole genome shotgun sequence.
ACCESSION   DATLMA010000120 DATLMA010000000
VERSION     DATLMA010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132187"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..787
                     /locus_tag="VNA10_01500"
     CDS             188..787
                     /locus_tag="VNA10_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36385.1"
                     /translation="MAKMDRCPICNVAVKSENLIRHLNDNHPRHPDRPGLLEKLKEEP
                     GRIPRRQAGRPFRVRGWQIALVAVIVLGGLGAVYLPPLLSGTPAFPCIRQEGGLLYHW
                     HTDLSISSAAGSVSIPAGIGIGAFCLEPVHTHDATGRIHIESDTARHYSIGDFFRVWG
                     KSFGSPTAMHLNGTAVTPSPDVILYDLPETIHLQYTSFS"
     gene            920..>2576
                     /locus_tag="VNA10_01505"
     CDS             920..>2576
                     /locus_tag="VNA10_01505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HVG36386.1"
                     /translation="MADDWHALRAEAVLQRLDSSPLGITSREASQRLSRFGPNELVQT
                     ARVSPLRILLSQFVDVLVIVLIIAAVISATLGLLQGETADLYDAVLIIVIVIMNAILG
                     FVQEYRAERSLEALKSLAAPKAHVLREGGVVAVPSRELVPGEVVVLAAGDRVPADARL
                     LEVASLRVNEASLTGESLPVSKAVEPQPRDSFLGDRKNMVFMGTTVDGGRGKAVLVET
                     GMSTQLGKIAGLVQQETKEETPLQKQLDRLGRQIGIAVLLAAGLIFGIGVLRDPGHVK
                     LLFLTAVGLSVAAIPEGLPAIVTISLALGLQRMIRRGALIRKLPAVEALGAASVICSD
                     KTGTLTKGEMNVRVLVVGAREYEAVGEGFDPSGAVRTDGRVASLEAHPGLQELLECGA
                     LCNDAVLKKEGPRWVVEGDPTEGALLVSARRAGLDPEIVRAKWPRVAEIAFTSERKKM
                     STLHTHLSESELREILALPEGERLRRLAGGSAVLHVKGAPERILAACSHHVVDGERKP
                     LSEYDRKQYVFRNQELATRALRVIGFAVREFQGAVPPLTEETLE"
BASE COUNT          425 a          842 c          828 g          481 t
ORIGIN      
        1 agtttcccat cccgggcgcg aatcgcgctt taggctacaa aaagatgctg ttgattattg
       61 ggcaggcctt gacaaaccgg attccccttc tgtcgttgcg ctgcgttcac gagactgccc
      121 ggcgtccgca gcatccctta atacaagccc atcctctctc tgtcatccag tcacctagga
      181 ggtcgccatg gcgaagatgg accgctgtcc gatctgcaat gttgcggtga agtccgagaa
      241 cctcattcgc cacctgaacg acaaccaccc gcggcatccg gatcgacccg gcctcttgga
      301 gaagctgaag gaggaacccg gtcggattcc gaggcggcag gccggtcggc cgtttcgcgt
      361 tcgcgggtgg cagatcgccc tcgtcgcggt gattgtcttg ggcggtctgg gtgccgtcta
      421 cctgccgccg ttactttccg gaacacccgc cttcccgtgc atccgacagg aaggcgggct
      481 cctgtatcat tggcacacag acctgagcat ctcatcggcg gcggggtccg tctcgattcc
      541 cgcggggatc ggaattggcg cattctgcct cgagcccgtc catacgcacg acgcgaccgg
      601 tcggattcac atcgagtccg acaccgcgcg ccactactcg atcggagatt tcttccgggt
      661 gtgggggaag tcattcggca gcccgactgc gatgcacctg aacgggacgg ccgtcacccc
      721 cagtccggac gtcatcctct acgatctccc cgagacgatt caccttcagt acacttcgtt
      781 ttcgtaaagc cgttgcgggc ctgctgcgtc ttcatgatat cgtcgcaccc cgttgctccc
      841 cgctcgcatc cggccgcggg tccactccga cggatgtccg ggacgagctt tattatgaat
      901 tgcgcatgtt ggacgcacga tggcggacga ctggcacgcc cttcgggcgg aggccgtcct
      961 ccaaagattg gattcctccc ccctagggat cacgagccgc gaggcttcgc agcggctgtc
     1021 ccgcttcggg ccgaatgagc tcgttcagac cgcgcgggtg agtcctcttc gcatcctgct
     1081 gagccagttc gtcgatgtgc tcgtaatcgt cctgatcatc gccgcggtga tctccgcgac
     1141 cctggggctc ctccagggag agaccgccga cctgtacgat gccgtgctga tcatcgtgat
     1201 cgtgatcatg aacgcgatcc tcggcttcgt ccaggagtat cgggcggaac ggtcgctcga
     1261 agccctcaag agcctcgccg cgccgaaggc tcacgtcctc cgggagggcg gggtcgttgc
     1321 cgtgccgtcc cgcgagctgg tgcccggcga ggtcgtcgtc ctcgcggcgg gcgaccgggt
     1381 ccccgcggac gcccgcctcc tcgaagtagc cagcctccgc gtcaacgaag cctccctgac
     1441 cggcgagtcg ctcccggtga gcaaggccgt cgagccgcag cctcgcgact ccttcctggg
     1501 cgaccgcaag aacatggtgt tcatggggac gacggtcgac ggcgggcgag ggaaggccgt
     1561 cctcgtcgag accggcatgt cgactcagct cggcaagatc gccggactcg tccagcagga
     1621 aacgaaggaa gagacgccgc tccaaaagca attggatcgt ctcggaaggc agatcggaat
     1681 cgcggtcctg cttgcggctg gactgatctt cgggatcggg gtgctccggg atcctggcca
     1741 tgtcaagctt ctcttcctga ccgccgtcgg actgtccgtc gcggcgattc ccgaggggct
     1801 ccccgcgatt gtgacgatta gtctcgcact gggtctgcaa cgaatgatcc gacgaggcgc
     1861 cctgatccga aagctcccgg ccgtcgaggc gttgggcgcc gcctccgtga tctgctccga
     1921 caagaccggg acgctcacga aaggagagat gaacgtccgg gtcctcgtcg tcggcgcccg
     1981 tgagtacgag gcggtcgggg aggggttcga tccatccggg gccgtccgga cggatgggcg
     2041 ggtcgcgagt ctcgaagccc atcccggctt gcaagaactt ctcgaatgcg gcgccctgtg
     2101 caacgacgcc gtcctcaaga aagaaggccc ccgctgggtc gtcgagggcg atccgacgga
     2161 aggcgccctc ctcgtctccg ctcggcgcgc gggcctggat ccggaaatcg tacgggcgaa
     2221 gtggccgcgc gttgccgaga tcgcgttcac gtcggagcgg aagaagatgt caaccctcca
     2281 cacccatctg tccgaatcgg agcttcgtga gattctcgcc ttgcccgagg gagagcggct
     2341 ccggcggctc gcgggcgggt cggcggtcct gcatgtgaag ggcgcgcccg aacggatcct
     2401 cgcggcgtgt tcccaccatg tggtcgacgg cgagcgaaag ccgctgtccg agtacgatcg
     2461 gaagcagtac gtgttccgga atcaggagtt ggccacgcgg gccctccgtg tgattggatt
     2521 tgccgtccgc gagttccagg gcgcggtgcc gccgctcacg gaggaaaccc tcgagg
//
LOCUS       DATLMA010000121         1831 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_556729, whole genome shotgun sequence.
ACCESSION   DATLMA010000121 DATLMA010000000
VERSION     DATLMA010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556729"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VNA10_01510"
     CDS             <1..304
                     /locus_tag="VNA10_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36387.1"
                     /translation="NLLAERTGKAVLRGLVTKAAKAAGGDLEVYGMVQGDVVNEGGRL
                     YVDKGAVVRGKVIGQTHPGPLPPPEKPVAPATTATPPATTPAPPVSPPKPPAAPGP"
     gene            complement(308..1042)
                     /locus_tag="VNA10_01515"
     CDS             complement(308..1042)
                     /locus_tag="VNA10_01515"
                     /inference="COORDINATES: protein motif:HMM:NF016831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG36388.1"
                     /translation="MSLWEISFRTQYDYPFMKISAQHPGLPISMWCIWNREMIQVPTR
                     DENVLDQIAKEIRKAGKCIDQWAEAGDSRIYMLKCTCASWDSPWNVWEPHEAVDAPPA
                     IFQDGWGYFRLIAFDEVRTRDLFKDFNKRGPTELIRKRELPLSVLPSSIWVNSLFGDL
                     TSKQSDALLKAHRYGYYSSPRDVTTENIARSLGVSRSTYEEHLRKAENRIMGNLIPYL
                     QLFSSGEKRPDKMPLKETPVEPNVEA"
     gene            1156..1410
                     /locus_tag="VNA10_01520"
     CDS             1156..1410
                     /locus_tag="VNA10_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36389.1"
                     /translation="MYLIAPDSTRIWTDSNRNFTLREYSRLEYGRSDVGWILASVKAS
                     RPAPKKRASRSLGLRLRYFLNSFRGFAAFDVHGHDDTQCP"
     gene            1456..1719
                     /locus_tag="VNA10_01525"
     CDS             1456..1719
                     /locus_tag="VNA10_01525"
                     /inference="COORDINATES: protein motif:HMM:NF021758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rdx family protein"
                     /protein_id="HVG36390.1"
                     /translation="MAEVTIRYCSPCRYLPKAIQDADAILKEFGESLSALRLVPGDHG
                     VYDVAVDDTVVFSLEKTNRFPESTELIQEIRARVKPRKARKKA"
BASE COUNT          320 a          591 c          569 g          351 t
ORIGIN      
        1 aaatctcctt gcggagcgga cggggaaggc ggtcctccga ggactcgtca caaaagccgc
       61 caaagccgct ggcggggatc ttgaggtcta cgggatggtc cagggagacg tcgtcaacga
      121 gggcggccgt ctttacgttg acaagggcgc cgtggtgcgg ggaaaggtca tcggccagac
      181 ccatcccggg ccgctcccgc caccggagaa accggtggcg ccagccacca ccgcaacgcc
      241 gccggcaacc acgccggctc ctcccgtttc gccgccgaaa cctccggccg cgccgggtcc
      301 gtgagcctca ggcctcgacg ttcggttcga ccggcgtctc tttgagcggc atcttgtccg
      361 gcctcttctc gccggacgag aacagttgga ggtacgggat caggttgccc atgatccggt
      421 tctccgcctt ccgcaggtgc tcctcgtagg tcgatcggct caccccgagg ctccgcgcga
      481 tgttctccgt ggtcacgtcg cgcggggagc tgtagtatcc gtagcggtgc gccttcagga
      541 gcgcatccga ttgcttcgag gtcaggtcgc cgaagaggct gttcacccag atgctcgacg
      601 gcaagacgct aaggggaagc tcccgcttcc ggatcagctc cgtcggcccg cgcttgttga
      661 agtccttgaa caggtcccgc gtgcggacct cgtcgaaggc aatcaagcgg aaatagcccc
      721 agccgtcctg gaaaatcgcc ggaggcgcgt ccacggcctc atggggttcc cacacattcc
      781 atgggctgtc ccagctcgcg cacgtgcact tgagcatgta gatccgggag tcccccgcct
      841 cggcccactg gtcgatgcac ttgccggcct tccgaatttc tttcgcgatt tgatcgagca
      901 cgttctcatc tcgggtcgga acctggatca tctctcgatt ccagatgcac cacatcgaga
      961 tcgggaggcc gggatgctgc gctgagattt tcatgaacgg gtagtcgtac tgggtccgaa
     1021 acgagatctc ccagaggctc atggaccgcc catgacggtc ccgggggata taggtggtgc
     1081 cgtcattcga cggccgccaa gggcgggtca aagaggttcg tcgcgggggc cttttacccg
     1141 ttcgaggtac aagacatgta tctgatcgca ccagacagca cacgaatttg gacggacagc
     1201 aaccgcaact tcaccctccg ggagtacagc cgcctcgaat acggccgctc ggacgtcggg
     1261 tggatcctcg cctcggtgaa ggcctctcgg cctgcgccga agaagcgcgc gagccgatcg
     1321 ctcgggttgc ggctgcggta cttcctgaac tccttccgcg gtttcgccgc gttcgacgtg
     1381 cacggtcacg acgacacgca gtgcccgtaa ggcggcggcg caccttttta tcggacggcc
     1441 ccgtcccggg aagggatggc ggaagtcacg attcgctatt gctctccgtg ccgctatctt
     1501 cctaaggcga tccaagacgc ggacgcgatt ttgaaggaat tcggcgagag cctctccgcc
     1561 cttcgcctcg tcccgggcga tcacggcgtg tacgacgtcg cggtcgacga cacggttgtg
     1621 ttctcgctcg agaagacgaa ccggttcccc gagtcgaccg agctgatcca agagattcgg
     1681 gctcgggtca agccgcgcaa ggctcgtaag aaagcgtgat cctcgcccta cgggggtctt
     1741 catcgacccg tcgtttgacg gccgtctatg gcgggtcaaa atccctcatc gaccgcgtcg
     1801 ttctccgttg catgttcgga accacatatc c
//
LOCUS       DATLMA010000122         1141 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_615152, whole genome shotgun sequence.
ACCESSION   DATLMA010000122 DATLMA010000000
VERSION     DATLMA010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_615152"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VNA10_01530"
     CDS             complement(<1..398)
                     /locus_tag="VNA10_01530"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HVG36391.1"
                     /translation="MIRRFRVGVPSEGTRLDLFLASACSDLSRSRIQKLIEEGAVRLS
                     GSSARRSHVVRAGEEIEVEIPEPRPVSIEPEEIALSILYEDEHILAVDKPPGLVVHPS
                     PGHGSGTLVNALLHHVRDLSGIGGELRPGIV"
     gene            complement(400..>1141)
                     /gene="lgt"
                     /locus_tag="VNA10_01535"
     CDS             complement(400..>1141)
                     /gene="lgt"
                     /locus_tag="VNA10_01535"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HVG36392.1"
                     /translation="YGVILAIAYLVGIWMLRRKARAEGLPEQKIFDFSLYVLAAAILG
                     AKLLLVIVEWRHYMRSPGDFIEVLRSGGVFYGGLIAATTVGIWYMRKHRLPAWKIADM
                     GAPSIALGEAIGRWGCFAAGCCYGKPTEGPFGVTFRDPFAHEAVGTPLNVALHPTQIY
                     LSLNAFLIFLILQWAYRRRTFDGEVFWLYVLLYAITRGILETFRGDSVRGFLIPGVLS
                     TSQFIGLLAVAAAVGMLIYLSRRRSAAA"
BASE COUNT          231 a          374 c          375 g          161 t
ORIGIN      
        1 acgattcccg ggcgaagctc tccaccgatg cccgacaggt cacgcacgtg gtggaggaga
       61 gcgttcacga gcgtcccgga accgtgtccg ggagacggat ggacgacgag acccggcggc
      121 ttgtcgaccg ccaggatgtg ctcgtcctcg tagaggatcg acagcgcgat ttcttccggc
      181 tcgatagaga ccgggcgggg ttccgggatc tccacctcga tctcttcacc ggcccggacg
      241 acgtgggagc gccgggccga agatccggag agccggaccg cgccctcttc gatcagcttc
      301 tgaatccgcg agcgcgagag atccgagcag gccgatgcga ggaacaggtc gagacgggtg
      361 ccttcggacg ggacgccgac ccggaagcgg cggatcaact cacgcggcgg cgctgcgccg
      421 tcgggagagg tagatcagca ttccaacggc cgccgcgacc gcgaggaggc cgatgaactg
      481 cgacgtcgag agaacgcccg gtatcaggaa cccgcggacg gaatcgcccc ggaaagtctc
      541 gaggattccg cgggtgatcg cgtagagaag gacgtacaac cagaagacct cgccgtcgaa
      601 cgtccgccgc cggtacgccc actgaaggat caggaagatc aagaacgcat tcagcgacag
      661 atagatctgc gtcgggtgga gcgccacgtt caacggagtt ccgacggcct cgtgcgcaaa
      721 cggatcccgg aacgtcacac cgaacggccc ttccgtcggc ttgccgtagc agcagcccgc
      781 cgcgaagcac ccccagcgtc cgatcgcctc gcccagagcg atcgagggag ctcccatgtc
      841 ggcgatcttc cacgccggca gacggtgttt cctcatgtac cagatgccga ccgtggtcgc
      901 cgcgatgaga ccgccgtaga acacgcctcc ggagcgcagc acctcgatga agtcgccggg
      961 actccgcatg tagtgtcgcc actcgacgat cacgaggagg agcttcgctc ccaggatggc
     1021 ggccgccagg acgtagagcg agaagtcgaa gatcttctgc tccggcaaac cttctgcccg
     1081 cgccttgcgg cgcagcatcc agatcccgac caggtacgcg atcgcgagga tgacgccgta
     1141 c
//
LOCUS       DATLMA010000123         1088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_373032, whole genome shotgun sequence.
ACCESSION   DATLMA010000123 DATLMA010000000
VERSION     DATLMA010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373032"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VNA10_01540"
     CDS             <1..592
                     /locus_tag="VNA10_01540"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HVG36393.1"
                     /translation="ASVGHVVLSSVASADRNTGIPHFESKAKVEQYLTASRVPHTITR
                     PVAFMDNYTSPWMTSSLQGGIMEVPLPPTTRQQLVAVKDVGEIVARAFDDPKAAIGKT
                     VELAGEELAFGDLPAALSKKLGHPIRYVEQPEEEARKRMGDDGFRMFQFFKTIGYHVD
                     ISALEKAWGYRMTRFQEFLDAVDWQQLGSGQWPSAP"
     gene            complement(579..>1088)
                     /locus_tag="VNA10_01545"
     CDS             complement(579..>1088)
                     /locus_tag="VNA10_01545"
                     /inference="COORDINATES: protein motif:HMM:NF015279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HVG36394.1"
                     /translation="VGAGQSEVEIASRAHTTVVVEMPLTGDVVQTMKAGILEIGDVYV
                     VNKVDLGNEDVLVANLKFQLEMRDGWTPPIIRTAALEGRGIDDLAGAVERHALYLDQS
                     GGRHKREVARARLEILENVQRLLVRQVSEGSRSGRTFDKLAEDVAARRIDPHAAARKL
                     LRSGPSTER"
BASE COUNT          203 a          370 c          329 g          186 t
ORIGIN      
        1 cgcatcggtt gggcacgtcg tcctctcgag cgtcgcctcg gccgaccgga ataccggcat
       61 cccgcatttc gaatccaagg caaaagtgga acaatacttg acggcctcgc gggtcccgca
      121 cacgatcacg cggcccgtcg ccttcatgga caactacacg agcccctgga tgacatcgtc
      181 cctccaagga gggatcatgg aggttcccct cccgccgacg acccgccagc agctcgtcgc
      241 ggtgaaggat gtcggggaga ttgtggcgag ggcgttcgac gacccgaagg cagcaatcgg
      301 caagaccgtg gaactcgccg gtgaagagct ggccttcgga gacctcccgg cagcgctatc
      361 gaagaaactg ggacatccga ttcgttatgt cgaacagccc gaggaagagg cccggaagcg
      421 gatgggcgac gacggattcc ggatgtttca gttcttcaag acgatcggat accacgtcga
      481 catctccgcc ctggaaaaag cctggggcta ccgcatgacc cggttccaag agttcctcga
      541 cgccgtcgat tggcagcagc ttggctcagg ccagtggcct agcgctccgt agagggaccg
      601 gacctcaaca gtttccgcgc agcggcatgc ggatcgatcc gccgagcggc gacatcctca
      661 gcgagcttgt cgaacgtgcg gccggagcgc gacccttccg agacctggcg gaccaggagg
      721 cgctgcacgt tctcgaggat ctcgagtcgc gcccgagcga cctcccgctt gtggcgcccg
      781 ccgctctggt ccaggtacaa cgcgtgtctc tcaaccgcgc ccgcaaggtc gtcgattccg
      841 cggccctcga gggcggcggt ccgaatgatc ggcggcgtcc aaccgtctcg catctccagc
      901 tggaacttca ggttcgcaac gagcacgtcc tcgttcccga ggtcgacctt gttcacaacg
      961 tagacgtcgc cgatctcgag gatcccggcc ttcatcgtct gcacgacatc gccggtcagg
     1021 ggcatttcca cgacgaccgt cgtgtgcgca cgactcgcaa tctccacctc gctctgcccc
     1081 gccccgac
//
LOCUS       DATLMA010000124         2909 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_12826, whole genome shotgun sequence.
ACCESSION   DATLMA010000124 DATLMA010000000
VERSION     DATLMA010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12826"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VNA10_01550"
     CDS             <1..440
                     /locus_tag="VNA10_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36395.1"
                     /translation="KDLRLTWWSLPDPAREIEAILAQSFGSGAVRLLASFSRAHGLRQ
                     EDLTTDHVPALLDFLTRAVTELSGVVAGTAGHGLRTQLEAAASGLRSFAAQGAEEVAR
                     GKWPSRISSEAHPDLLVTAAEYWKGKEMEELFAAAELIVEDEK"
     gene            437..1153
                     /locus_tag="VNA10_01555"
     CDS             437..1153
                     /locus_tag="VNA10_01555"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG36396.1"
                     /translation="MKRVSTHIEGLDEVLGGGIPEGNVVLVSGAPGTMKTSLTYHILH
                     SSALDGSRGLYVSLEQGRVSLIDHTEGLGYRLDDTHGNLSVLDLGTLRKKLTGSAEQP
                     WLDLFKLYTQGIRKSFDYRFLVLDSLDALEILAKFREPRREMFSLIRWLRDLKCTAFL
                     LGELPTDRTGGADPRRAAYAKHKEDYLVDGILHLRLARQGEFGMQRQLRVVKMRGTRH
                     DTGYHALVFDNGFRVTRGFA"
     gene            complement(1154..2275)
                     /locus_tag="VNA10_01560"
     CDS             complement(1154..2275)
                     /locus_tag="VNA10_01560"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HVG36397.1"
                     /translation="MPDDFVVTPWDVKGFVDYDRLVTQFGTERITPELLERIRKITGE
                     LHPMLRRGVFYSHRDLNWILDQYEKGTPFALYTGRGPSSGIHIGHMLPWFFTKWIQEK
                     FHAKLYFQITDDEKFLFKDFDNLEEATKVGYDNILDIIAMGFDPKLTSIFLDTEYIHH
                     LYPIAVEVAKRITYSTTQAVFGFENANNIGEIFYTSIQAAPAFLPTIEAGKEIPVLIP
                     CGIDQDPHFRITRDVAPKLGYPKPALIHNKLLPSLLGPGGKMSASIPESSIFTTDTEA
                     QARKKVMNAFTGGRATVEEQRRLGANPYICSIFRQYEYIFEPDDRNLKIVEETCKSGA
                     RLCGDCKEELWDKVRRWLKTHHAAREKAKDHVEEFVIRD"
     gene            complement(2319..2762)
                     /locus_tag="VNA10_01565"
     CDS             complement(2319..2762)
                     /locus_tag="VNA10_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36398.1"
                     /translation="MSEFGRALRSFGKAYIVAVVALGIVAYVASRFLSMDPFALYQLF
                     LVFLGVGYVFSAVLSWTGFGNLYRYSPTLFIGSPSYRKTITKGDMRKEGRDQASLAVG
                     ILFGLALLGSGVALLGWLFAAGMVAVAVAVGYSLRFLDSLPEKTA"
BASE COUNT          546 a          907 c          904 g          552 t
ORIGIN      
        1 tgaaggactt gcggttgacc tggtggtcgc tccccgatcc ggcgcgcgaa atcgaagcaa
       61 tcctcgcgca gtccttcggc agcggtgcgg tccgcctcct cgcgtcgttc agtcgagccc
      121 acggtcttcg gcaggaggac ctcaccacgg atcacgtgcc ggccctcctg gacttcctca
      181 cgcgcgccgt caccgaactc tccggcgtcg tggcggggac ggcgggtcac ggtctccgta
      241 ctcaactcga agccgccgcg agcggcctgc gttcgttcgc ggcccagggc gccgaggagg
      301 tggcccgcgg caagtggccg tcccggatct catccgaggc ccacccggac ctcctcgtca
      361 ccgccgccga gtattggaag ggcaaggaga tggaggagct cttcgcggct gcggaactca
      421 tcgtggagga cgaaaaatga aacgagtctc gacgcacatc gagggactcg acgaggtcct
      481 cggaggcggc atcccagaag gcaacgtcgt cctcgtctcc ggagcgcccg gcacgatgaa
      541 gacctcgctc acgtaccata tcctccactc gagcgcgcta gacggctccc gcgggctgta
      601 cgtctcgctc gagcaaggcc gggtcagctt gatcgaccat acagaaggcc tcggctaccg
      661 cctcgacgac acgcacggca acctgagcgt cctggacctc ggcacgcttc gcaagaaact
      721 gaccgggtcg gcggaacaac cgtggctgga cctgttcaag ctctacacgc aaggcatccg
      781 caagtcgttc gactaccgct tcctggtcct cgactcgctc gatgcgctcg agatcctcgc
      841 aaagttccgc gagccgcgac gggagatgtt ctccctcatc cgttggcttc gggatctcaa
      901 gtgcacggcg ttcctgctcg gagaactgcc gacggatcgc acgggtggtg cggatccccg
      961 ccgcgccgcg tacgcgaagc acaaggagga ttatctcgtg gacgggatct tgcacctccg
     1021 gctcgcgcga cagggcgagt tcgggatgca gcgacagttg cgggtcgtca agatgcgagg
     1081 gacgcggcac gacacgggct accacgcgct cgtcttcgac aacggcttcc gggtgacacg
     1141 gggattcgcg tagtcagtcg cggatcacga attcctcgac gtggtccttc gccttttccc
     1201 gggccgcgtg atgagtcttg agccatcgcc gcaccttgtc ccacagctct tccttgcaat
     1261 caccgcacag gcgtgctccg gacttgcacg tctcctctac aatcttcaga ttgcgatcgt
     1321 ccggttcgaa gatgtactcg tactgcctga agatcgagca gatgtacggg ttggccccga
     1381 gccggcgttg ctcctcgacg gtggctcgcc ctcccgtgaa cgcgttcatc acctttttcc
     1441 gcgcctgggc ttccgtgtcc gtcgtgaaga tgctcgactc cggaatcgag gcggacatct
     1501 ttccgccggg gccgaggagg ctggggagga gcttgttatg gatcaaggct ggcttcggat
     1561 acccaagctt cggagcgaca tctcgggtaa tccgaaaatg gggatcctgg tcaatgccac
     1621 acggaatcag gacgggaatc tcttttcccg cctcgatggt cggtagaaac gccggcgcgg
     1681 cttggatgct cgtgtagaag atctcaccaa tgttgttcgc gttctcaaag ccgaagaccg
     1741 cctgggtcgt cgagtacgtg attcgtttcg cgacctcgac ggcgatcgga tacagatggt
     1801 ggatgtactc cgtgtccagg aagatgctcg tcagcttcgg gtcgaagccc atcgcgatga
     1861 tgtcgaggat gttgtcgtag ccgaccttcg tcgcctcctc gaggttgtcg aagtccttga
     1921 agaggaactt ctcgtcgtct gtgatctgga agtacagctt cgcgtggaac ttctcttgaa
     1981 tccacttcgt gaagaaccag gggagcatgt gcccgatgtg aatgccgctc gagggccccc
     2041 ggcctgtgta caacgcgaac ggcgtccctt tctcgtactg gtccaagatc caattcaagt
     2101 cgcggtggct gtagaatacg ccccgccgca gcatcggatg gagctcgccg gtgatcttcc
     2161 taatccgttc cagaagttcg ggggtgatcc gctccgtccc gaactgggtc acgaggcggt
     2221 cgtagtccac gaaccccttg acatcccatg gggtgacgac gaagtcgtcc ggcatttcaa
     2281 tcgcgtattc cggcccgtag ataaagactc gcgggtactc atgcggtctt ttccgggagg
     2341 gagtcgagga aacgcaggga gtagccaacg gcgaccgcaa ccgcgaccat gcccgcggcg
     2401 aagagccacc cgagaagcgc cacgccggaa ccgaggagcg cgaggccgaa caagatgcct
     2461 accgcgaggg atgcctggtc acggccctcc ttgcgcatgt ctcctttcgt gatggtcttt
     2521 cgatagctgg gcgatccgat gaacagggtg ggcgaatagc gatacaaatt tccgaagccg
     2581 gtccacgata ggaccgccga gaacacatac ccgacgccca ggaacacgag gaacagttgg
     2641 tagagagcga acggatccat cgagaggaat cgagaagcga cgtacgcgac gattccgagg
     2701 gcgaccaccg cgacgatgta cgccttcccg aaggatcgga gggcgcgacc gaattcgctc
     2761 atggtcctcc ggtcagacca tgatcgcgtg gcggccccgc atgtccgctt cggtctgtcc
     2821 gagtcgttcc atgatctggg cgacgacgcc gtccagcagg aggaccgtgg cgtcctcgaa
     2881 caacgttccg agcggtgcga gtcgagtct
//
LOCUS       DATLMA010000125         1255 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_133038, whole genome shotgun sequence.
ACCESSION   DATLMA010000125 DATLMA010000000
VERSION     DATLMA010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133038"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VNA10_01570"
     CDS             <1..544
                     /locus_tag="VNA10_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36399.1"
                     /translation="LEAETARIAGSCVFEADVHVEEFRSAGSTRIAGSLKAEEVETSG
                     SLQVDGSIEAEEISSSGSLTVKGRVVAEEFRSSGSVRIDGGVKAEEVAIDLGGTSKIS
                     TIEAEEIRVKATGGFFRIRGELTADRIEGEEIELEATTAAFVRGDEVRIGPHCHIDVV
                     EAKELVVHSSSEVRERRTPS"
     gene            615..>1255
                     /locus_tag="VNA10_01575"
     CDS             615..>1255
                     /locus_tag="VNA10_01575"
                     /inference="COORDINATES: protein motif:HMM:NF014419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HVG36400.1"
                     /translation="MPERIVLKVAEAPQSDVGLGRARVDTKTRVALGVDVGEIIQILG
                     KKSTAAKLFRVMQEDEGKGIIRIDGLVRRNVGVSLGDKVEVRKAEVLPAERITIAPII
                     SEGHKISFGQGIENFVKRGLLKRPLNKGDVVIVPGIALMGGALPFMVISTAPKGVVQI
                     QDDTIIEMKEEPVREGEVLTPTVTYEDIGGLKEELMKVREMIELPLKHAELFER"
BASE COUNT          253 a          366 c          431 g          205 t
ORIGIN      
        1 cctggaggcc gagacggcgc gcatcgccgg gtcctgcgtc ttcgaggccg acgtgcatgt
       61 ggaggaattc cgctcggcgg gctcgacgcg aatcgccggg agtctgaagg ccgaagaggt
      121 cgagacgagc ggctcgctcc aggtcgacgg ctccatcgag gccgaggaga tttcctcgag
      181 tggttcgctg accgtcaagg ggcgagtcgt cgccgaggaa tttcgatcga gtggatcggt
      241 tcgcatcgac ggcggcgtga aggccgagga agtcgcgatc gatctgggcg gcacatcgaa
      301 gatctccacg attgaagccg aagagattcg agtgaaggcc acgggcggct ttttccgcat
      361 ccgcggggag ctgaccgcag accgcatcga aggcgaggag atcgagctcg aggcgacgac
      421 cgcggcgttc gtcaggggcg acgaggtccg tatcgggccc cattgccata tcgacgtcgt
      481 cgaggcgaaa gagctcgtcg tgcactcgtc cagcgaggtc cgcgaacgtc ggaccccatc
      541 ctgatttgcc aactttgtcc gacgacgatt atcgtcccgg aaccttgata taagccgggg
      601 gagttcgaac cggtgtgcct gagcggattg tcctcaaggt ggccgaagcg ccccaatccg
      661 acgtcggttt gggccgcgca cgggttgaca cgaagacccg cgtagccctc ggggtggacg
      721 tcggcgaaat catccagatt ctcggcaaga agtccactgc cgcgaagctc ttccgggtca
      781 tgcaagagga cgaaggcaag ggcatcatcc gcatcgacgg tctcgtccgc cggaacgtcg
      841 gcgtgagcct cggggacaaa gtcgaggtcc gcaaggccga ggtcctcccc gcggagcgca
      901 taacgatcgc gccgatcatc agcgagggcc acaagatttc atttggccag gggatcgaga
      961 acttcgtcaa gaggggcctg ctgaaacgcc cgctcaacaa gggcgacgtc gtcatcgtcc
     1021 cgggaatcgc gctcatgggc ggtgcgttgc cgttcatggt catcagtacg gcgccgaagg
     1081 gcgtcgtcca gatccaggac gacacgatca tcgagatgaa agaggagccc gtccgcgagg
     1141 gcgaggtcct cacgcccacg gtcacgtacg aggacatcgg cggactcaag gaggagttga
     1201 tgaaggtccg cgagatgatc gagctcccgc tcaaacacgc ggagctgttc gagcg
//
LOCUS       DATLMA010000126         2558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_796216, whole genome shotgun sequence.
ACCESSION   DATLMA010000126 DATLMA010000000
VERSION     DATLMA010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796216"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VNA10_01580"
     CDS             <1..461
                     /locus_tag="VNA10_01580"
                     /inference="COORDINATES: protein motif:HMM:NF021513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2240 family protein"
                     /protein_id="HVG36401.1"
                     /translation="RDAIALLFKRKGRDELSEREFVLSASMDLHWFPPRDAQRLLQLG
                     LETKLLESQGGAIRPAFDVSSVEVPRDYVPTSAILDVATPVSEDVFLRIVDAIAAKTR
                     TDRKSVIASVNAVQAKLDVEVEVAALVAAHQVGVDVTPFLPAVKGRLGMP"
     gene            complement(463..975)
                     /locus_tag="VNA10_01585"
     CDS             complement(463..975)
                     /locus_tag="VNA10_01585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00270.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiprotein bridging factor aMBF1"
                     /protein_id="HVG36402.1"
                     /translation="MRARFVICELCGADVPRLKNVAIDATILAVCTDCARFGDEVSAP
                     ALRQSTMPPIIAQRLEMRQRRMTPRDVYTQTGELELADDFPQRIRQAREARGWKQADL
                     GAKINERVSVIAKLEAGTISPGDSLVRKLERELGIKLKEHVEPVAVKKQAAGSGVTLG
                     DLIKMRDEGP"
     gene            1039..2250
                     /locus_tag="VNA10_01590"
     CDS             1039..2250
                     /locus_tag="VNA10_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014586389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome-activating nucleotidase"
                     /protein_id="HVG36403.1"
                     /translation="MDDDQIREFSEKMSERIASLEDRNDKLLETARRVEGEKRYAETE
                     LGRLQKEIRRLKQELDRLKSPPLIIGNIRDILADGRVVVKSSTGPDFIVNAADYIAKE
                     NLLVGARVALNKQTLAVMGVLPPSLDPIVTGAEIIEKPPVTYEDVGGLEAQMRELREA
                     VEDPLLKPDLYRKVGIEPPKGVLLVGPPGTGKTLLAKAVANRTQATFIRFVGSELVQK
                     YIGEGARLVRELFQLAREKSPSIVFIDELDSVGAKRLEIATSGDREVQRTLMQLLAEL
                     DGFNPLGEVKIIGATNRPDILDEALLRPGRFDRIIEIPIPSHEARLTIFKIHTRKMSV
                     TSDVDYGVLAARCDGTTGADIHAMCTEAGMFAIREEREVVTMTDFERAVDKVLGESPI
                     RSTDASGAMYA"
     gene            2327..>2558
                     /locus_tag="VNA10_01595"
     CDS             2327..>2558
                     /locus_tag="VNA10_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36404.1"
                     /translation="MAKTDHCPICNVSVKPENLVRHLNDIHPRHPDTPRLREELKAEA
                     GRVASRRTAAPIRVQTWQVALVALIVVGGVGVY"
BASE COUNT          463 a          809 c          845 g          441 t
ORIGIN      
        1 ttcgcgatgc gatcgccctc ctgttcaagc gaaaaggccg ggacgaactg agcgagcggg
       61 aattcgttct ctcggcctcg atggacctgc attggttccc tccacgggat gctcaacgtt
      121 tgctccaact cgggctggag acgaagctcc tcgagtcgca aggcggcgcg attcgtcctg
      181 cgttcgacgt gagctccgtc gaggtgccgc gagactacgt cccgacctcg gcgattctcg
      241 acgtggccac gcctgtgtct gaggatgtct ttctgcggat cgtcgatgcc atcgcggcga
      301 aaacgcggac cgatcggaaa tcggtgatcg cgtcggtgaa cgcggtccag gcaaagctgg
      361 acgtcgaagt cgaggtcgca gccctcgtcg cggcgcacca ggtgggggtc gacgtcacac
      421 cgttcctgcc cgcggtgaag ggccgcctcg ggatgccgtg attcacggac cctcgtcgcg
      481 catcttgatc aggtcgccga gggtgacgcc gctcccggcc gcttgtttct tgacagcgac
      541 cggctcgacg tgttccttca acttgatgcc gagctcccgt tcgagcttgc ggacgagcga
      601 gtcgcccggg ctgattgttc cggcctcgag cttcgcgatg acgctgaccc gttcgttgat
      661 cttcgcgccg agatccgcct gtttccatcc ccgggcctct cgcgcctggc ggatccgttg
      721 ggggaagtcg tccgcgagtt cgagttcgcc ggtctgcgtg tacacgtcgc gcggggtcat
      781 gcgtcgctgg cgcatctcca gtcgctgcgc gatgatgggg ggcatcgtgc tctgccgcaa
      841 cgccggcgcc gagacctcgt ccccgaagcg cgcgcagtcc gtgcagaccg ccagaatcgt
      901 cgcgtcgatg gccacattct tgaggcgcgg gacgtccgcg ccacacaatt cgcagatcac
      961 gaatctagcc cgcaaagact aaataaaaag tgctgggtat atagccttcg tcttcccgcc
     1021 cacccaccgg acgattctat ggacgacgac cagatacgtg aattctcgga gaaaatgtcg
     1081 gagcggatcg cctcgctcga ggaccgcaac gacaagctgt tggagacggc ccggcgggtc
     1141 gaaggcgaga agcgatacgc cgagacggag ctcggccggc ttcaaaagga gatccggcgg
     1201 ctcaaacaag aactcgatcg gctcaagagt ccgccgttga tcatcgggaa catccgggac
     1261 atcctggcgg acggccgcgt ggtcgtgaag tcgtccacgg gtccggactt catcgtgaac
     1321 gccgcggatt acatcgccaa ggaaaacctc ctagtcggcg cacgggtcgc gctgaacaag
     1381 cagacgctcg ccgtgatggg cgtgctgccg ccttccctgg atccgatcgt tacgggggca
     1441 gaaatcatcg agaaaccccc ggtcacctac gaggacgtcg ggggactcga ggcccagatg
     1501 cgggaactgc gcgaggccgt cgaagacccg ctcctcaagc cggacctgta ccgcaaggtc
     1561 gggatcgagc cgccgaaagg agtgctcctg gtcggcccgc caggcaccgg gaagacgctc
     1621 ctcgcgaagg cggtcgcgaa ccgtacccag gcgacgttca tccgattcgt cgggtcggag
     1681 ctggtccaga agtacatcgg cgagggcgcg cgcttggtgc gggagctgtt ccagctggcc
     1741 cgtgagaaat ccccgtcgat tgtcttcatc gacgaactcg actcggtcgg ggcgaaacgc
     1801 ctcgagatcg cgacgtcggg cgaccgggag gttcagcgga cgctcatgca gctgctcgcg
     1861 gaactcgatg ggttcaaccc gctcggagaa gtgaagatca tcggggccac gaaccggccg
     1921 gacatcctcg atgaagccct gctgcgcccg ggccgcttcg atcggatcat cgagatccca
     1981 atcccgagcc acgaggcccg cctgacgatc ttcaagatcc acacccgcaa gatgagcgtg
     2041 acgtcggacg tcgactacgg cgtcctcgcg gcccgatgcg acggcacgac cggggccgac
     2101 atccatgcga tgtgcacgga ggccgggatg ttcgcgatcc gcgaggagcg cgaggtcgtg
     2161 acgatgaccg atttcgagcg ggcggtcgac aaggtcctcg gcgagagccc gatccgatcg
     2221 acggacgcgt ccggtgcgat gtacgcatga gttcgaaggg cgtccgcgtc attcctaaat
     2281 agcaggcggt cctcctttcg accgtccgag ctgggaaggt cccgcgttgg cgaaaacgga
     2341 tcattgtccg atctgcaacg tctccgtgaa accggagaac ctcgtgcgtc acctgaatga
     2401 catccacccg cggcatccgg acaccccgcg gctgcgcgag gaactcaagg cggaggcggg
     2461 ccgggtcgca tcgaggcgga cggcggcgcc gatccgggtc cagacgtggc aagtcgccct
     2521 ggtggccctg atcgtggtcg gaggggtcgg ggtctact
//
LOCUS       DATLMA010000127         5369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_615538, whole genome shotgun sequence.
ACCESSION   DATLMA010000127 DATLMA010000000
VERSION     DATLMA010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5369
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_615538"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..880)
                     /gene="aroC"
                     /locus_tag="VNA10_01600"
     CDS             complement(<1..880)
                     /gene="aroC"
                     /locus_tag="VNA10_01600"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HVG36405.1"
                     /translation="MNTFGSRYRTTIFGTSHGPFVGCTIEGLRAGTPIDPRLVQVQLD
                     RRRPGQSLLTSQRKEEDRVEFAEGLQAGTATGEPIVAIIANQDVQSKSYAENARVPRP
                     GHGDFTAIMKYGGKTDLRGGGQLSGRMTAPLVVSGAIARQVLEAKGIQFFAHAAQIGR
                     VTADAVTPKQIEVNVERTPVRCADLDAADRMIAEIEEARKGRDSVGGVIEGMVTRLPP
                     GIGEPFFDSVESTLAHLLFSIPAVKGVDFGAGFRGAAMRGSEHNDPFTIERGRVVTAT
                     NHAGGILGGITNGMPVT"
     gene            complement(877..2133)
                     /gene="aroA"
                     /locus_tag="VNA10_01605"
     CDS             complement(877..2133)
                     /gene="aroA"
                     /locus_tag="VNA10_01605"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HVG36406.1"
                     /translation="MASRVSGSIQASPSKSYTHRAIVLAALSQGPCHLHRPLLAEDTE
                     ATIQGLGAFGADITRTGDGLQISAGPLHSSDAPIDARNSGTTLRFLSGVASLSPGPTL
                     LTGDVSLRKRPMGPLLDALERLGARAGSLSGDGRPPVKVQGVIRGGRASVPGFISSQF
                     LSSLLIAAPLAANPSEIQVVPPTRSEPYVAMTRRTMRAFGVEVDLTENTFRIEGGQSY
                     TPTDVDIPGDFSSAAFPLVAAAITGGDVTVEGLNADSPDGDSRIVDLLRSFGARVDTL
                     PNRVRVRSGDLVGQTVDVGDTPDLFPVLAVLATQADGETRFVHGEHLPLKESDRIAAT
                     VSMLWALGGRAQTTADGCIVRGPERLHGGFIDTRGDHRMLMAAAVAGLTAGGPLDISD
                     PWCFRVSYPSFLNDMRALGALHAVVG"
     gene            complement(2145..3002)
                     /locus_tag="VNA10_01610"
     CDS             complement(2145..3002)
                     /locus_tag="VNA10_01610"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:TIGR01920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HVG36407.1"
                     /translation="MKARASCFGAGTVVNAIAAGHGVAFGLALQATATAETQPERFGV
                     RIAAVEGVDPGLVMSAARRLLEQSGSGRGLAISVDSEIPVSRGLKSSSAVANAVVLAS
                     ARALGAELEPLEMIRIGVDAALDAGVTLTGAFDDACASFFGGIVLTDNHARKILRRDR
                     FSEDVVAVVHIPDRTIPKAALKRLDFGPIRPEVEAAYRLAERGEYFRAMEANSGAYAA
                     VLGVSEAPAVRARKAGALAAGISGTGPAIIALAGRSEVEAVRAAMAEPASVVRIVPLN
                     NIESREVVA"
     gene            complement(2999..4483)
                     /gene="aroE"
                     /locus_tag="VNA10_01615"
     CDS             complement(2999..4483)
                     /gene="aroE"
                     /locus_tag="VNA10_01615"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HVG36408.1"
                     /translation="MTKVAAVILGRNASEVERQSRIALAKGADLVELRFDEIADLGTE
                     TIRHLAKVVGEHAIATVRSHGQGGAQRRGRAPRSALMKEICGHRFAYVDLELEADEAE
                     LDDLARVAHHHGAKVIVSHHFAEAKDVHRASEVLEACGARGDIAKVATPIADFGTAIQ
                     LIDLARARANRPPPMVLIGTGTMGMVTRALTDALREEIQYASWGSAAAPGQLPLATAA
                     RLRGREPMILGLVGHPLEHSLSPVIHETALAALNLPAVYLPMDIPLDFLDQFLLAVDR
                     LHIRGFNVTHPLKESLAQCVDELDADAERLGAVNTVVVRDGWTVGHNTDVYGFRVSLR
                     ALGLRVGERTALVVGAGGAARAVVHVLLREGASVQVTNRTIARAEALADSFDDPVAVV
                     PMEALQRAGPWDLLVNATPIGMKGAAPGLPVPEAVVAKAAFVYDLVYNPTATPLLQAA
                     RRLNRPGTSGLDMLLHQAAKAFELWTGQSPPFDAMRRAVKEALR"
     gene            complement(4485..>5369)
                     /locus_tag="VNA10_01620"
     CDS             complement(4485..>5369)
                     /locus_tag="VNA10_01620"
                     /inference="COORDINATES: protein motif:HMM:NF014064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase II"
                     /protein_id="HVG36409.1"
                     /translation="SIHLKGSTFFLGEAEVGRLATIRLAKDEALVRALRGATKYVVVR
                     LEPWKVIPLENLIAFFQGSGTRLLVEVHDVTEAKLAFETMEVGADGIFLTTSSPNEVR
                     AVRALLESFQQDIRLVRAKITGTRSLGLGDRVCVDTCSLLRRGEGLLVGNASAGLFLI
                     HSETIETDEAAARPFRVNAGPVHAYLYLPGGTTKYLSELRAGDDVLAVDSKGRARSVV
                     IGRVKVERRPLLFVEAEANDRRYSTIVQNAETVRFVTPDGGSVAVSELQLGDEVLLRL
                     EEVGRHFGMPIQETIAER"
BASE COUNT          933 a         1785 c         1753 g          898 t
ORIGIN      
        1 aggtcaccgg cattccgttc gtgatcccgc cgaggatgcc tcccgcgtgg tttgtcgcgg
       61 tcacgacccg tcccctttca atcgtgaatg gatcgttgtg ttcgctcccg cgcatcgcgg
      121 cgccccggaa tccggccccg aagtcaacgc ccttcacggc aggaatcgag aacaggagat
      181 gagccaacgt cgattcgacg gagtcgaaga acggctcgcc gatgccggga gggaggcggg
      241 tcaccatccc ctcaatgacg ccgcctacgc tgtcccggcc cttgcgggcc tcctcgatct
      301 ccgcaatcat gcggtctgcg gcatccaagt ccgcgcaacg gaccggcgtg cgctcgacgt
      361 tcacctcgat ctgtttcggc gtgacggcgt ctgcggtgac ccgtcctatc tgagcggcat
      421 gggcgaagaa ctggatgccc ttcgcctcca agacctgccg cgcgatcgcg ccggagacca
      481 cgagaggggc ggtcatgcgg ccggacagtt ggccccctcc gcggagatcc gtcttgcctc
      541 cgtacttcat gatggccgtg aagtcgccgt gccccggcct cgggacgcgg gcgttttctg
      601 cgtatgactt cgattgcacg tcttggttcg cgatgatcgc tacgatcggc tcgcctgtcg
      661 cggtgcccgc ttggagccct tccgcgaact cgacgcgatc ttcctccttc cgctgggagg
      721 taaggaggct ttgccccggc cgacggcggt cgagctgcac ctgcaccaac cgcggatcga
      781 tcggtgtgcc ggcccggagc ccctcgatcg tgcagccgac gaaggggcca tggctcgtcc
      841 cgaagatcgt cgtccggtac cgtgatccga aggtgttcat ccgaccaccg catggagggc
      901 gccgagcgcc cgcatgtcgt tcaggaacga cggataggaa acccggaagc accaggggtc
      961 cgaaatgtcg aggggcccgc ccgccgtgag gccggccacc gccgcggcca tcagcatccg
     1021 gtggtctccg cgcgtgtcga tgaatccgcc gtgcaaccgc tccggtccgc gaacgatgca
     1081 cccgtccgcg gtggtctgtg cgcggccacc caacgcccag agcatcgaga cggtcgcggc
     1141 aatccgatcg ctttccttca gaggaagatg ctctccgtgg acaaaccgcg tctcgccgtc
     1201 ggcctgcgtc gcgaggacgg ccaggaccgg gaacaggtcc ggtgtgtcgc cgacatcgac
     1261 ggtctggccc acgaggtcgc cgctgcgcac ccgaacccga ttcggtagcg tgtcgaccct
     1321 cgccccgaac gaacgcaaca ggtcgacgat ccgagagtcc ccatcggggg aatccgcgtt
     1381 cagcccttcg accgtcacgt ctccgcccgt gatcgcggcg gcgacgagag gaaacgccgc
     1441 ggaggaaaag tcgcccggaa tgtccacatc cgtcggcgtg tacgattgcc cgccctcgat
     1501 ccgaaacgtg ttctccgtga gatcgacttc gaccccgaag gcgcgcatcg tgcgtctcgt
     1561 catcgccacg taaggctccg accgggtggg cggaacgacc tggatttcgg acgggttcgc
     1621 cgcgaggggg gccgcgatca gaaggctcga caagaactgt gagctgatga atcccgggac
     1681 ggaagcccgg ccaccgcgga tgaccccttg caccttgacg ggagggcggc cgtctccact
     1741 gagcgatcct gcgcgggcgc cgaggcgttc gagggcgtcc agcaatgggc ccatcggccg
     1801 cttccgaagg ctcacgtccc cggtcaagag ggtcggaccg ggagagagcg aggcgacccc
     1861 gctcaggaag cggagggtcg tccccgagtt ccgtgcgtcg atcggagcat cggacgaatg
     1921 cagtggcccc gcggagattt gcagtccatc cccggttcgg gtgatgtcgg cgccgaaggc
     1981 acctagtcct tggatcgttg cctccgtgtc ctccgcgaga agcggtcgat ggaggtggca
     2041 tggaccttgg gacagagccg caaggacgat cgcgcggtgc gtgtagctct tcgacggaga
     2101 cgcttggatg gagccggaga cgcgcgatgc catggacaag tacctcaggc gaccacctcg
     2161 cgcgactcga tgttgttcag tgggacgatg cggactacgg acgcaggttc cgccatcgct
     2221 gctcggacag cctcgacttc ggaacgcccc gcgagagcga tgatcgccgg tcccgtgccg
     2281 ctgattccgg cggcgagggc gcccgccttc ctggcacgga ccgcaggcgc ttcactcact
     2341 ccgaggaccg ccgcatacgc cccactgttc gcctccatcg cccgaaagta ttccccgcgt
     2401 tcggcgaggc gataagccgc ttcgacctca ggacgaatcg gcccgaagtc cagacgtttg
     2461 agggccgcct tcggaatcgt tcggtcgggg atgtggacga cggccacgac atcctccgag
     2521 aaccggtctc tcctgaggat cttgcgggca tggttgtcgg tcagcacgat tccgccgaag
     2581 aaagaagcgc atgcgtcgtc gaacgcacca gtgagcgtca cccccgcgtc gagggccgcg
     2641 tctacgccga tccggatcat ctcgagcggt tcgagttccg cgccgagcgc ccgggcgctc
     2701 gcgaggacga cggcattcgc gaccgcggag ctgctcttca ggccccgaga aaccgggatc
     2761 tcggagtcga ccgagatcgc gagaccgcgg ccgctcccac tctgctcgag cagcctccgg
     2821 gcggcgctca tgaccagtcc gggatcgacg ccttccaccg cagcgattcg cacgccaaac
     2881 cgttcgggtt gcgtctcggc ggtcgcggtg gcctggaggg ccaggccgaa tgctacccca
     2941 tgaccggccg caattgcatt cacaaccgtt ccggcgccga agcaggaggc ccgggctttc
     3001 atcggagcgc ctccttcacg gctcgtcgca tcgcatcgaa gggcggggac tgtccggtcc
     3061 agagttcgaa cgccttggcc gcttgatgga gcaacatgtc gaggccggaa gttccgggtc
     3121 ggttcagacg cctggcggcc tggagcagcg gcgtggcggt gggattgtac accaggtcgt
     3181 agacgaatgc ggccttcgca acgaccgcct cgggcactgg aaggccgggc gcagcgccct
     3241 tcatcccgat tggcgtcgcg ttcaccagaa ggtcccaggg gcccgcgcgt tggagcgcct
     3301 ccatcgggac caccgcaacg ggatcgtcga acgagtccgc gagggcctcc gcgcgggcga
     3361 tcgtccgatt cgtcacctga accgatgcgc cctcccggag gaggacatgg acaaccgctc
     3421 gggccgcgcc tcccgcgccg acgacgaggg cggtccgttc gccgacccgg aggccgaggg
     3481 cccgcaggga cacccggaac ccatagacat ccgtgttgtg gccgaccgtc caaccatctc
     3541 ggacgacgac cgtgttgacg gcgccgagtc gctcggcatc cgcgtcgagc tcgtcaacac
     3601 attgcgcgag agattccttg agcggatggg tcacgttgaa gccgcggatg tggagccggt
     3661 ccactgccag aaggaactgg tcgaggaaat cgaggggaat gtccatgggc agatacacgg
     3721 cgggcaagtt gagcgccgcc aaggccgtct cgtgaatcac gggggacagg gagtgttcca
     3781 acggatggcc gaccaagccg agaatcatcg gttcacgccc gcgtaaacgg gcggcggtgg
     3841 cgagaggcag ttgccccggg gccgcagcgc tcccccaaga cgcatattgg atctcctcac
     3901 ggagagcgtc ggtgagtgcg cgtgtgacca tccccatcgt gccggtcccg atcaggacca
     3961 tcgggggagg tcgattggcc ctcgcgcgtg cgagatcgat cagttggatg gccgttccga
     4021 agtccgcaat cggggtcgcg accttggcga tgtcgccccg ggccccacac gcctccagga
     4081 cctcggacgc tcgatggaca tccttggcct cggcgaagtg gtgggacacg atgacttttg
     4141 caccatggtg gtgggcgacg cgggcaaggt catcgagttc tgcctcatcc gcttcgagct
     4201 cgaggtcgac gtacgcgaac cgatggccgc agatttcttt catcaacgca gaccgcgggg
     4261 cacggcccct gcgttgtgcg ccgccttggc catgggaacg caccgtcgca atcgcgtgtt
     4321 cgccgacgac cttcgccaga tgacgaatcg tctcggtccc caggtccgcg atttcatcga
     4381 atcgcagctc gacgaggtca gcgcctttgg cgagagcgat ccgagattga cgctcgacct
     4441 ccgacgcgtt ccttccaagg atgacggccg cgactttcgt catgtcatcg ctccgcgatg
     4501 gtttcttgaa tcggcattcc aaaatggcgg cccacctcct ccagacggag gaggacctca
     4561 tcgcccaatt ggagctcgct cacagcgacc gatcctccgt ccggtgttac gaaacgaacc
     4621 gtttccgcgt tctggacgat tgtcgaatag cggcggtcgt tggcctcggc ttcaacgaaa
     4681 aggagcggtc ggcgttcgac tttcacgcga ccaatgacca ctgaacgagc gcggcctttc
     4741 gagtccaccg cgaggacgtc gtcgcctgcg cggagttcgc tgagatactt ggtcgtgcct
     4801 ccaggaagat agagataggc gtggaccggc cccgcgttca cccggaacgg acgggcggcc
     4861 gcctcgtccg tctcgatcgt ctccgaatgg atcagaaaaa ggcccgccga ggcgttgccg
     4921 acgagcaacc cttcgccgcg ccgaaggagg gagcacgtgt cgacgcagac gcggtcgccg
     4981 aggccgaggc ttcgcgtccc cgtgattttc gcccgcacca agcggatgtc ctgctgaaag
     5041 gattcgagca atgcgcggac ggcacgaacc tcgttcggcg aggaggtcgt gaggaaaatg
     5101 ccgtcggcgc ctacctccat cgtctcgaag gcgagctttg cttccgtaac atcgtgaacc
     5161 tccacgagca accgggtccc gctgccctgg aagaacgcga tcaggttctc gagcgggatg
     5221 accttccacg gttccagccg aacgaccacg tacttcgtcg cgccccgcaa cgcacgaaca
     5281 agcgcctcgt ccttcgccaa gcggatcgtc gcgaggcgtc cgacttcggc ctcgccgagg
     5341 aagaacgtcg agcctttcaa atgaatcga
//
LOCUS       DATLMA010000128         1014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_735980, whole genome shotgun sequence.
ACCESSION   DATLMA010000128 DATLMA010000000
VERSION     DATLMA010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735980"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VNA10_01625"
     CDS             <1..391
                     /locus_tag="VNA10_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HVG36410.1"
                     /translation="AKAGHDVVMAPQKPTYLDHSQSELPTEPPGIGGHNSLEDVYAYQ
                     PVPKELSADEAKHVLGAQAQIWTEYMPDPKRVEYMAWPRLIALAEVLWSPAETRDWAD
                     FQKRLATHLERLAILDVNYRGRFNPPD"
     gene            570..>1014
                     /locus_tag="VNA10_01630"
     CDS             570..>1014
                     /locus_tag="VNA10_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006904139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG36411.1"
                     /translation="MAGGTVTIPIGADPTLNPWSPNAFVESLFINRAIFEGITKPGKD
                     LAPAPDLAESWTTAPDGLSWTFKLRSGVKWSDGTPFSADDVAFTFNDVVLKPDLGAQN
                     RASYAAVKSVTAIDPNTVRFDLSRKFAALPSFLAYNAGILPKHVLS"
BASE COUNT          181 a          359 c          311 g          163 t
ORIGIN      
        1 cgcgaaagcc gggcacgacg tggtgatggc gccgcagaag cccacgtatc tcgaccactc
       61 gcaaagcgag cttccgacgg agccgccggg gatcggcggt cacaactcgc tcgaggatgt
      121 ctatgcgtac cagccggtcc cgaaggagct ctcggctgac gaggcgaagc acgtcctcgg
      181 cgcgcaggca cagatctgga cggagtacat gcccgatccc aagcgcgtcg agtacatggc
      241 ctggccgcgc ctcatcgcgc tggccgaggt gctgtggtcg ccagccgaaa cgcgggactg
      301 ggccgacttt cagaagcggc tcgcgacgca cctcgagcgc ctcgcgatac tcgacgtcaa
      361 ctaccgcggg cggttcaacc caccggactg agccccgctt gggtctaaac tgccctctct
      421 acgcgcaggg gaggtccgtg atgctcgttc gacgtcaccg tctgtttgcc tttccgacgc
      481 tcgcgctcgt gggagcgctc ctcgcctcag catgcactgg agcgacacag ccaggtgctt
      541 ccacgtctcc gtcagcgcag ggcggaccgg tggccggcgg gacagtgacg atcccgatcg
      601 gcgcagatcc gacgctgaat ccgtggagtc cgaacgcctt cgtcgaatcg ctcttcatca
      661 accgcgcgat ctttgagggg atcaccaagc cgggaaagga cctcgcgccc gccccggacc
      721 tcgcggagag ctggaccacg gcacccgatg gcctcagctg gacgttcaag cttcgaagcg
      781 gagtgaagtg gagcgatggc actcccttct ccgccgacga tgtcgcgttc accttcaacg
      841 acgtcgtcct caagcccgac ctcggcgcgc agaaccgcgc gagctacgcc gccgtaaaga
      901 gcgtcaccgc gatcgacccg aacacggtcc gcttcgacct gtcccgcaag ttcgccgcac
      961 tcccttcgtt cctggcgtac aacgccggga tcctcccaaa gcacgtcctc tcgg
//
LOCUS       DATLMA010000129         1527 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_133731, whole genome shotgun sequence.
ACCESSION   DATLMA010000129 DATLMA010000000
VERSION     DATLMA010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133731"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VNA10_01635"
     CDS             <1..440
                     /locus_tag="VNA10_01635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36412.1"
                     /translation="LLDIERMKSATQQVHAAEMIAAEAVALLDTGNYAAAVDRAERAR
                     DTLAKQVAVLPSKFESSIGPSSFVALAGPSFVAVAFVAVSSMLLPAGETFLMLNYTLN
                     TGAILAFSYGWLGLILYTLISIYYVLRPPSMKASAKERAMRGR"
     gene            715..>1527
                     /locus_tag="VNA10_01640"
     CDS             715..>1527
                     /locus_tag="VNA10_01640"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HVG36413.1"
                     /translation="MGSRSYRTFVALSASALLVLSALVISGIVPFSTPGNSAGPGPIS
                     SSATGNFDQLVVVLMENQNLNDVYGHATYMTQLADTYAFSEGWSSITNPSQPNYIAIL
                     GGSTFGVSGDGNHPNLNHPTMVDIMENTGKTWKAFAEDASGSGCSINPPRGEDHYPFL
                     SYTTITGNSARCANLLPGSYTQVISAFNNGTNYIWLTPNDCNNMHSCSVATGDAWIQS
                     WVPNLLTAMAGKKAALIIMFDEAYTSPPLIYMGFSGPATKLAYKSTASYNHYS"
BASE COUNT          292 a          484 c          439 g          312 t
ORIGIN      
        1 tccttctcga catcgaacgg atgaagtcgg cgacgcagca ggtccacgcg gctgaaatga
       61 tcgctgcgga agccgtcgcg ttgctcgaca ccggaaatta cgccgccgcg gtggatcggg
      121 cggagagggc acgcgacacg ctggccaagc aggtcgccgt gttgccttcg aagttcgagt
      181 cgagcatcgg gccgagttcc ttcgtcgcgc ttgcgggtcc atcattcgtc gcggtggcgt
      241 tcgtcgccgt gtcgtcgatg ctgttgcccg ccggcgagac gttcttgatg ttgaactaca
      301 cgctgaacac cggcgccatt ctggccttca gctacggatg gttgggcctg atcctgtaca
      361 cactcatctc catctactac gtgttgcgcc cgccctcgat gaaagcgtct gcaaaagaac
      421 gggcgatgcg cggacgatag accgttcgtc cgtggtgatg cgacaaccgt ctggcgatcg
      481 gattgctgag tcgagagcgg cccgtgcacg tgccgcgtgg aaatctcggt cgcgatccag
      541 cgagctctga cgtcgtcgtg ttccgtgcga acggaaacgc aattccgaca gcgcgcatcg
      601 cactcccgat tctctaattc tccgtgttat ctcttccgat tatcgccggt gaacattttg
      661 gagaatacca tcatcgacgc tgcctgacat ccggacgcgc ccccggggaa ggtaatgggt
      721 tctcgatctt accgtacgtt cgttgccctt tcggcttccg cgcttcttgt cctctcggct
      781 ctcgtcatct cggggattgt ccccttcagc actcctggga acagcgccgg cccgggaccg
      841 atttcttcca gcgcaaccgg gaacttcgac caactcgtgg tcgtcctcat ggagaaccag
      901 aacctgaacg acgtctacgg ccacgccacg tacatgaccc agctcgcgga cacctacgca
      961 ttctcggaag gttggtcgag catcacgaac ccgtcccagc cgaactacat cgcgatcctc
     1021 ggcgggagta cgttcggcgt ttccggcgat gggaaccatc cgaacctgaa ccacccgacg
     1081 atggtcgaca tcatggagaa caccggcaag acgtggaagg ccttcgccga ggacgcgagc
     1141 ggatcgggct gctcgatcaa tcccccgcgg ggcgaggacc actacccgtt cctctcgtac
     1201 acgacgatca ccgggaactc ggcgcgttgc gcgaaccttc tgccgggttc gtacacccag
     1261 gtcatcagtg ccttcaacaa tgggacgaac tacatttggc tcactccgaa cgactgcaac
     1321 aacatgcact cctgttccgt cgcgacggga gatgcgtgga tccagagttg ggtgccgaat
     1381 ctgcttaccg cgatggcggg caagaaggcc gcgctcatca tcatgttcga tgaggcatac
     1441 acgagccctc cgttgatcta catgggattc agcggtcccg ccacgaagct ggcgtacaag
     1501 tcgacggcct cgtacaatca ctactcg
//
LOCUS       DATLMA010000130         1259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_855921, whole genome shotgun sequence.
ACCESSION   DATLMA010000130 DATLMA010000000
VERSION     DATLMA010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855921"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1019)
                     /locus_tag="VNA10_01645"
     CDS             complement(165..1019)
                     /locus_tag="VNA10_01645"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36414.1"
                     /translation="MNTFWRTFKVAAWLGWEMDSNWTEPWLFIVYSVVKPVAGAFILV
                     LMYTVFAFLPGNRQDLAAFSYMYVGNSFFIFVGSVLFGTFQVIQSDREWYQTIRYVYM
                     APISYYVYIVGRAASKVVVAAFAVLITLMFGVAFLNVQIHMTLGSVPLFLVSTALGLA
                     VLLAIGICLGGVSFLTAKHTHGLAEGIPGIFYVFCGVLFPLSVLPVWGQAVGRAIPLT
                     YWFDITRRLLAPTIGVDSTLVGYSDLTILLLLFVSSIAFFGLSVLIFKAGEYFARKAG
                     KIDMTTSY"
     gene            complement(1016..>1259)
                     /locus_tag="VNA10_01650"
     CDS             complement(1016..>1259)
                     /locus_tag="VNA10_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36415.1"
                     /translation="WGPIVGILGSFVPATFGLDALRQLTLGTTAFGGQLWIFDVRTEL
                     YILLFMAVLFLILARYSLAYLETLAKREGKLTSRHQ"
BASE COUNT          286 a          365 c          416 g          192 t
ORIGIN      
        1 cggtccttct gcaagaagtg cctcgcgttt ctccttccgt ccgtgagctc tcgggtccgc
       61 gtgggcggag gtcgggtggt ggtcacgtgc aacgcttgcg gagcggtcca gcgcttcccg
      121 taccgtcggg agcagcgggc ccgtcgcgcc ggtcgggcga ggcctcagta ggaagtcgtc
      181 atgtcgatct tgccggcctt ccgggcgaaa tactcgcccg ccttgaagat caaaacgctc
      241 aggccgaaga acgcgatcga cgagacgaag agcaggagga ggatcgtgag gtcactgtac
      301 cccacgagcg tcgaatccac gccgatcgtc ggagcgagga gtcgccgggt gatgtcgaac
      361 cagtacgtga gcgggatcgc ccgtccgacc gcctgccccc aaaccgggag cacggagagc
      421 gggaagagca ccccgcagaa cacgtaaaag atgcccggga tcccctccgc gaggccgtgt
      481 gtatgcttcg ccgtgaggaa cgacacgccg ccgagacaga ttccgatcgc gaggaggacc
      541 gcgagcccga gggcggtgct cacgaggaag agcgggaccg acccgagcgt catgtgaatc
      601 tggacattca ggaacgcgac gccgaacatc aacgtgatga ggaccgcgaa ggcggcaacc
      661 acgaccttgg aggcggctcg ccccacgatg tagacgtaat acgaaatagg ggccatatac
      721 acgtatcgaa tcgtctggta ccattctcgg tccgattgga tgacctggaa agtcccgaac
      781 aagacggatc ccacgaagat gaagaaggag ttcccgacgt acatgtagga gaaagccgcg
      841 aggtcttgac ggttgccggg gaggaaagcg aagacggtgt acatgaggac caggatgaac
      901 gcgccggcga cgggcttgac gacggaataa acgatgaaaa gccatggctc tgtccagttc
      961 gaatccatct cccagccgag ccatgcggcg accttgaagg tccgccagaa cgtgttcatt
     1021 gatgccgtga ggtcaatttc ccctctcgct tcgcgagcgt ctctaggtaa gccagggaat
     1081 accttgcgag gatcaagaac aagacggcca tgaagaggag aatgtacagc tccgtccgca
     1141 cgtcgaagat ccacagctgc ccgccgaaag cggtcgtgcc gagggtgagc tgccggagcg
     1201 cgtcgaggcc gaacgtggcg ggcacgaacg acccgaggat cccgacgatg gggccccat
//
LOCUS       DATLMA010000131         2916 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_796471, whole genome shotgun sequence.
ACCESSION   DATLMA010000131 DATLMA010000000
VERSION     DATLMA010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796471"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1735)
                     /locus_tag="VNA10_01655"
     CDS             complement(<1..1735)
                     /locus_tag="VNA10_01655"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003869986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase subunit B"
                     /protein_id="HVG36416.1"
                     /translation="MVEETAYDAGQIQVLEGLQAIRKRPAMYIGSVDARGLHHLVHEV
                     VDNSIDEAMAGFCKEIQVTLNADGSVTVADDGRGIPVDTHPKYGAPGVEIVLTRMHSG
                     GKFERKMYRVSGGLHGVGLSVVNGLSEWLEVRVKRDGQEHRMRFARGKKASDLEVVGP
                     AEGTGTIITFLPDSEVFESIEFDYDILATRLRELAFLNAGLRIIIVDKVHDRGDVFQF
                     QGGIAEYVKWINRAKNPLHPDPIRFAKESDGTLVEVAMQYHDGYNESIFTFVNNIDTI
                     EGGTHLVGFKAGLARAFIKYAKDNKYLKQGESLEGDDAREGLTAILSLKIPEPQFEGQ
                     TKMKLGNSEVKGIVESIVYEKLTEFFLETPKVAEICIGKAVLAAQAREAARKARELTR
                     RKGLLEGFNLPGKLADCQERDPAKSELFIVEGPSAGGSAKQGRRREFQAILPLRGKIL
                     NVEKARLDQMLKNEEIRTLITAIGAGIAEEFNLAKVRYHKIITMADADVDGQHITTLL
                     LTLFFRYTRPLIDSGFVYIAQPPLYKIKKGKDLHYAYTEKQREDLAKRLGDKGVVYQR
                     YKGLGEMNAEEL"
     gene            complement(1981..>2916)
                     /locus_tag="VNA10_01660"
     CDS             complement(1981..>2916)
                     /locus_tag="VNA10_01660"
                     /inference="COORDINATES: protein motif:HMM:NF013565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DALR domain-containing protein"
                     /protein_id="HVG36417.1"
                     /translation="QKVESLRPGARIAIEERKRHPADFVLWRARKPGEPAWDSPWGKG
                     RPGWHIEDTAITIRHFGPQYDLHGGATELMFPHHEAEIAQAEAYTGITPFVKYWMHGG
                     MVTVKGEEMHKSLGNYWPVKAALKLYEPEVIRFFLINVQYRGPIDFAPELLEEAKRSY
                     ERLRETTRTLDAERRRAAGAGKGDRSLKTATAKALSDFDAAMSDDFNTREAIAVIFDY
                     GRALNKAIETGVGRGALDDAAQAYATFGEVLGIFQPTVQGGDQVERLLDLIVELREEA
                     RKRKDFAAADRIRDALAAVGVVLEDTRDGVRWKRK"
BASE COUNT          470 a          969 c          844 g          633 t
ORIGIN      
        1 agagttcctc ggcgttcatc tcccccaggc ccttgtaccg ctggtacacg acgcctttgt
       61 cgccgagtct cttcgccaaa tcttcccgct gtttctccgt gtacgcatag tggaggtcct
      121 tgcccttctt gatcttgtac aacggcggtt gcgcgatgta cacgaacccg ctatcgatga
      181 gcggccgcgt gtaccggaag aacaacgtga gcaacagcgt cgtgatgtgc tgaccgtcga
      241 cgtccgcatc agccatcgtg atgatcttgt ggtaccggac ctttgcgaga ttgaactcct
      301 cggcgatgcc cgccccgatc gcggtgatca gcgtccggat ctcctcgttc ttcagcatct
      361 gatctagtcg cgccttctcg acgttcagga tcttcccgcg aaggggcagg atcgcctgga
      421 actcgcggcg acggccttgt ttcgccgatc cgccggcgga tggtccttcc acgatgaaca
      481 actccgactt cgcagggtct ctctcctggc agtccgcgag ttttccgggg aggttgaacc
      541 cttccaagag gcctttccgt cgcgtgagct cgcgggcttt tcgcgcggcc tcgcgcgcct
      601 gcgccgcaag caccgccttc ccgatgcaaa tctccgcgac cttcggcgtt tccaagaaga
      661 attcggtcag cttctcgtac acaatcgact cgacgatccc cttgacctcg gagtttccaa
      721 gcttcatctt ggtctgtccc tcgaactgcg gctcggggat cttgaggcta aggatcgccg
      781 tcaatccctc gcgggcgtcg tcgccttcga ggctttcgcc ctgctttaga tacttgttgt
      841 ccttcgcgta tttgatgaaa gcgcgggcaa gcccggcctt gaatccgacg agatgggtcc
      901 cgccctcgat cgtgtcgatg ttgttgacga acgtgaagat cgattcgttg tagccgtcgt
      961 gatattgcat cgcgacctcg acgagggtgc cgtcggattc cttcgcgaac cggatcggat
     1021 ccggatggag cgggttcttc gcccggttaa tccacttgac gtactcggcg atgcctccct
     1081 ggaactggaa cacatccccg cggtcgtgga ccttgtccac gatgatgatc cgaaggccgg
     1141 cgttcaggaa ggccagctcc cgcaggcgcg tcgccaggat gtcgtaatcg aactcgatgg
     1201 attcgaaaac ctcagaatcc ggaaggaagg tgatgatcgt cccggtgcct tccgccggtc
     1261 cgacgacctc gaggtccgag gctttcttgc cccgcgcgaa ccgcatccgg tgttcctggc
     1321 cgtccctctt cacgcggacc tcgagccact cgctcaggcc gttgaccacg gagagaccaa
     1381 ccccgtgcag cccgccggac acgcgataca tcttccgttc gaacttcccg ccgctgtgca
     1441 tccgcgtcag gacgatctcg acgcccggcg caccgtactt cggatgggtg tcgaccggaa
     1501 tcccgcgtcc gtcgtccgcc accgtgacgg acccgtccgc gttcaaggtg acctggatct
     1561 ccttgcagaa accggccatc gcctcgtcga ttgagttgtc gacgacctcg tggacgaggt
     1621 ggtggaggcc gcgcgcatcg accgagccga tgtacatcgc aggccgtttt cggatcgcct
     1681 gcaggccttc gaggacctgg atctgtcccg catcgtaggc ggtctcttct accatctact
     1741 tcgtaacctc tcagagcgcg tttcggagcc ctctcgcagc ccatcccgac ggatggccca
     1801 agtatacggc tggcggttat aaacgttcgg aggccagttt ctatggagaa aacagccctt
     1861 ggtgaaggac gttcttttcg ttttaattcc ttaaatactg tagcacggtc gttttgaccc
     1921 cctcattctc gccttcgaga atgttggatg gaaggccgga aatccaacct cggtcggggc
     1981 ctattttcgc ttccaccgga cgccgtcgcg agtgtcctcg aggaccaccc cgaccgcggc
     2041 gagcgcgtcg cggattcggt ccgcggccgc gaagtctttg cgcttgcggg cttcctcgcg
     2101 taactccacg atgagatcca ggaggcgctc gacttggtcc ccgccctgca cggtcggctg
     2161 gaagatgccc aacacctcac cgaacgtcgc atacgcctgc gcggcgtcgt cgagggcacc
     2221 tcgccccacg cccgtctcga tggccttgtt cagggcacgt ccgtagtcga agatcacagc
     2281 gatcgcctcc cgggtgttga agtcgtccga catcgccgcg tcgaagtcgg agagggcttt
     2341 cgcggtggcc gtcttgagcg agcgatcgcc cttgccggca cccgccgctc ggcgacgttc
     2401 cgcgtcgagc gtccgtgtcg tctcacgaag ccgctcgtac gaacgcttcg cctcctcgag
     2461 gagctccggt gcgaagtcga tgggcccgcg atattgcacg ttgatcagga agaagcgaat
     2521 cacctcgggc tcgtacagct tcaacgccgc cttcacgggc cagtagttgc ccaaggactt
     2581 gtgcatctcc tcgcccttca cggtgaccat cccgccgtgc atccagtact tcacgaaggg
     2641 cgtgatcccg gtgtacgctt cggcctgggc gatctccgcc tcgtgatgag ggaacatcag
     2701 ttccgtcgcc cctccatgga ggtcgtactg cggtccgaag tgtcggatcg tgatcgccgt
     2761 gtcctcgatg tgccatccgg gccggccctt gccccacggg ctgtcccacg ccggctcccc
     2821 cggcttccgc gccctccaga ggacgaaatc ggcgggatgc cgtttccgtt cctcgatggc
     2881 gatccgggcc cccggccgga gcgattcgac cttctg
//
LOCUS       DATLMA010000132         1310 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_433328, whole genome shotgun sequence.
ACCESSION   DATLMA010000132 DATLMA010000000
VERSION     DATLMA010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433328"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1005)
                     /locus_tag="VNA10_01665"
     CDS             complement(64..1005)
                     /locus_tag="VNA10_01665"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HVG36418.1"
                     /translation="MATATASSHARRPSLRRTSRSVAFESALAIVVVLAAVAELVSVM
                     VGQRGLDTGYLQTRFPVYLDAVRVNLYATTIAFIIGMGIGFLVGWARTIRVVSPQRIV
                     QDFRQAKAEQPSNRTRLNIGLSLALFAAGVRHILHRIADAYVEIIRGTPLLTQIVFAW
                     AIVITFYAQLGTAGAVLAGVAGLTVNTGGYQGEIFRAGLQTVQSGQVEAARGLGLSRW
                     RAMRYVVLPQALRLVIPPLTNEFIGLFKASSLLYFISVAEVTFLSKQEAYKGHPFESF
                     AIITGIFLLITIVLSRVLQFLEQRFRVPGLGIELIRE"
     gene            complement(1008..>1310)
                     /locus_tag="VNA10_01670"
     CDS             complement(1008..>1310)
                     /locus_tag="VNA10_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016739486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein"
                     /protein_id="HVG36419.1"
                     /translation="QQRVAIARALAMDPKAMLFDEPTSALDPEYIREVLDVMTSLARD
                     GMTMIVVTHEMGFASSVARRIVFMDGGVILEEGVPEEVFHNPKHERTKAFVSKILR"
BASE COUNT          261 a          416 c          412 g          221 t
ORIGIN      
        1 cggcgtcatc tgagcaagcc gttgaagcga caggtcgcgg cgaggctatc ccagcagccg
       61 gagctactct cggatcaact cgatgcccaa cccgggtacc cggaaccgct gctcgaggaa
      121 ttgtaggacg cgggacagga cgatcgtgat gagcaggaaa atccctgtga tgatcgcgaa
      181 gctctcgaac ggatggccct tgtaggcctc ctgcttcgat aggaacgtga cctccgccac
      241 gctgatgaaa tacaggagcg agctcgcttt gaacaacccg atgaattcat tcgtcagtgg
      301 cgggatgacg agacgaagcg cctgcgggag gaccacgtac cgcatagcgc gccaccgcga
      361 aagcccgagt ccacgcgccg cttcgacctg acccgattga accgtctgga gaccggcccg
      421 gaagatttcg ccttgatagc cgcccgtgtt tacggtgagg ccagcaactc cggccaggac
      481 cgcgcccgcg gttcccagct gggcgtagaa cgtgatcacg atggcccacg cgaacacgat
      541 ctgcgtcagc aagggagtgc cacggatgat ctcgacgtac gcgtccgcga tcctgtgaag
      601 gatgtgtctc acgccggccg cgaagagcgc caaggaaagt ccgatgttaa gtcgggtccg
      661 gtttgacggt tgctccgcct tcgcctgccg gaagtcctgg acgatccgct gcggcgaaac
      721 gacccggatg gtccgcgccc atcccaccaa gaaaccaatc cccatcccga tgatgaacgc
      781 gatcgtggtc gcatacaggt tcacccggac ggcgtccaga tacaccggga atctcgtctg
      841 gagatagccg gtgtcgaggc cgcgctggcc caccatgacg gaaacgagtt cggcaaccgc
      901 cgcgaggacg acgacgatcg cgagggcgga ctcaaacgcg accgaccggg acgtgcgtcg
      961 cagcgacgga cgtctcgcat gcgaggaagc ggttgccgtt gccatggtca tctcaggatc
     1021 ttgctgacga aggccttcgt gcgttcgtgt ttcgggttgt ggaacacttc ttcggggacg
     1081 ccttcctcca ggatcacccc gccatccatg aacacgatcc gcctggccac gctgctcgcg
     1141 aagcccatct cgtgggtgac gacgatcatc gtcattccgt cccgcgcgag ggacgtcatc
     1201 acgtcgagga cctcccggat gtactcgggg tcgagggccg aggtcggctc atcgaagagc
     1261 atggccttgg ggtccatcgc cagggcccgc gcgatcgcga cccgctgctg
//
LOCUS       DATLMA010000133         1392 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_856110, whole genome shotgun sequence.
ACCESSION   DATLMA010000133 DATLMA010000000
VERSION     DATLMA010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856110"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VNA10_01675"
     CDS             complement(<1..606)
                     /locus_tag="VNA10_01675"
                     /inference="COORDINATES: protein motif:HMM:NF017652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HVG36420.1"
                     /translation="MDKLIITVAPTGSVPRKKDTPHVPVTPDEIADTAYRCEQEGAAI
                     IHVHCRDADERPTSRLDIFRETVEKIRKRTKLVVMTSTSGIAGQTDEDRATPLRTNPE
                     MGSLTTGTLNFAGRKPSVVYVNTPETVQFLAKAMLDQNIKPELEAFDVGFVQQGKRLI
                     DAGLVKEPAHFQLVMGVDGGVPATPENLLHMRNQLPPNATYV"
     gene            complement(692..>1392)
                     /locus_tag="VNA10_01680"
     CDS             complement(692..>1392)
                     /locus_tag="VNA10_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36421.1"
                     /translation="VLDPEFLVADEPVSMLDVSIRTEILELLLELREKKGLTYLFITH
                     DLSLAWVLADRIGVMYLGKIVEEGPTRELIKNPRHPYTKALVSVVPVPDPDRRRQRII
                     LKGERPDPSDIPPGCRFHPRCPVAFERCGWIAEEVVTELKDLAVGTPEEGLFAGLRAD
                     NPGAFTLPSAPPDAEATIRRLIEAKGEEFRGLKAIQSIERTDAGIRVSLHEFTEPDLK
                     AIAPDVKVSCHLFA"
BASE COUNT          219 a          446 c          459 g          268 t
ORIGIN      
        1 gacgtacgtc gcattcggcg ggagttgatt gcgcatgtgc agcaggtttt ctggtgtggc
       61 ggggacgccg ccgtcgacgc ccatgacgag ttggaagtgc gccggctcct tcacgaggcc
      121 tgcgtcgatc aaccgcttgc cttgctggac aaatcccacg tcgaaggctt cgagttccgg
      181 cttgatgttc tgatcgagca tcgccttggc gaggaattgg acggtctcgg gcgtgttcac
      241 gtacacgaca gatggcttgc gcccagcgaa gttgagcgtc cccgtcgtga gcgagcccat
      301 ctccggattc gtccgcaacg gcgtcgcgcg atcctcgtcc gtctggccgg cgattccgct
      361 cgtcgacgtc atgacgacga gcttcgtccg cttgcggatc ttctcgaccg tctcccggaa
      421 aatgtcgagc cgagacgtgg gacgctcgtc cgcgtcgcgg cagtggacgt ggatgatcgc
      481 cgcgccctcc tgctcacacc ggtacgcggt atcggcgatc tcgtccggcg tcaccggcac
      541 atggggcgtg tccttctttc gcggcacgga gcccgtcggc gcgaccgtga tgatgagctt
      601 gtccaagccc tctgccggag cccgctacgc gtcgattcgt agtaaagggt tgtggcgctc
      661 gaacccgcct cggaatgtgg acgtcccgag cttacgcgaa caagtggcac gacaccttca
      721 cgtcgggtgc gatggccttg aggtcgggct ccgtgaattc gtggagcgac actcggattc
      781 ccgcgtccgt ccgctcgatt gactgaatcg ccttgagtcc ccggaattcc tcacccttcg
      841 cctcgatgag tcgccggatc gtcgcctcgg cgtccggggg cgcggagggc agcgtgaagg
      901 cgcccgggtt gtccgcccgg aggcctgcga aaagtccctc ctccggagtc ccgacagcga
      961 gatccttcag ctcggtcacg acctcctccg cgatccagcc gcatcgttcg aacgccacgg
     1021 ggcatcgagg atggaaccgg catcccggcg ggatgtccga gggatccggt cgctcgcctt
     1081 tcaggatgat gcgctgacgc cggcggtccg ggtccgggac cgggacgacg gacaccaggg
     1141 ccttcgtgta cggatggcgc ggattcttga tgagctcccg cgtcggccct tcttcgacga
     1201 tcttccccag gtacatgacc ccgatgcggt ccgcgaggac ccacgcgagc gagaggtcgt
     1261 gggtgatgaa caggtacgtg agccccttct tctcgcgcaa ctcgaggagg agctcgagga
     1321 tctccgtgcg aatcgagacg tcgagcatgg agacgggttc gtcggcgacc aggaactccg
     1381 gatccaggac ca
//
LOCUS       DATLMA010000134         3966 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_73381, whole genome shotgun sequence.
ACCESSION   DATLMA010000134 DATLMA010000000
VERSION     DATLMA010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3966
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73381"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VNA10_01685"
     CDS             <1..682
                     /locus_tag="VNA10_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36422.1"
                     /translation="LADETGKTQFSAWKDFDLKAEEVLRIEGAYVKSWRGIPQISFDE
                     RATITRLKSDLLPPANVLNASPRMWIEDLAERGGGADVTVRGILIDLREGSGLVYRCP
                     ECRRVLRKGACRLHGEVKGEPDLRVKAVLDDGSGAVTAVFDRELTEALLDKTLDACIA
                     AAKEAMSTDIVRDELADVLVAQPIEVRGNVTSDDYGLMMIVESAKMLKVDVQAEAREM
                     LEGLEGST"
     gene            679..1566
                     /locus_tag="VNA10_01690"
     CDS             679..1566
                     /locus_tag="VNA10_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36423.1"
                     /translation="MMREVAWRLFASEYNDANLEMDGGGDRAPSYIVTPLGAKVNRVF
                     VVGVITDVENVGSDVQPMWRARVSDPTGTFHIYAGQYQPEAAATLSKLKPPVFGAIVG
                     KSRIYSPEAGTVFTSIRPERIKPVDEAVRDYWILEACRSLRKRLDTMAEARKMDPLTK
                     EGLAKMGVKEAIADGIVQAVNHYGTVDLSRYTAMLAEGLRYLLPEYREPADPRDATPE
                     PVSAAKEEAPSEPDETESKVLAIITTLDKDGKGAPWEGILEAAVSKSVAKDALEESIN
                     SLLDKGLIYEPILGRMKKI"
     gene            complement(1576..2067)
                     /locus_tag="VNA10_01695"
     CDS             complement(1576..2067)
                     /locus_tag="VNA10_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36424.1"
                     /translation="MVSVRNPLAGFGITILGTVALSFLVGIPILFLPRDLAYFYFPFA
                     LFAVGVFSGRTTFIGSLGFMGALIGGIVGVYAFQALFLPAGWPLTAGVPVWLTGVSFI
                     TVLVFGAACGLGGAASGKLGLKRIERLTDRAPKMRRCLKCGAKVGMSARKCWSCRSYL
                     PPT"
     gene            2434..3324
                     /locus_tag="VNA10_01700"
     CDS             2434..3324
                     /locus_tag="VNA10_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HVG36425.1"
                     /translation="MALPRDSIYLSVDALPEPLERVRVRKVPTGIADLDSIVDGGFPS
                     GSTILLWGDIGAGMQEYVYTAGSKTALVNERPEARHYYLGDRCDDSDLPTQVCYVTFS
                     RSKDIILQELATSFNGDYYRAFRDHTVFKDFSSVYFRHSVVPATWTNEDDVFDRPSTN
                     ILEELVAFLDENAHDSMVVIDSITDLAVSDIVEIKDLVTTIKGLQRVAKRWNGLVYLM
                     LTRGILERRHESLLMDSTDGCLVFEWRTSTRSSNRQRYMYLEKFTGVLPHLPRDKIAR
                     FPTMVSSNTGLVVVYMERIS"
     gene            3412..>3966
                     /locus_tag="VNA10_01705"
     CDS             3412..>3966
                     /locus_tag="VNA10_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG36426.1"
                     /translation="MDGLDEMLGRGVPTGHIITVLGSFGTGKTTFALQFLMQGLINGE
                     KAIFISLEEDADSVIANAASFGWDLPKYIKEKKLHIVKLEPADAKTTVTRIRSELPDF
                     IKRSGASRVAIDSVSLLNMLFADDKERREKLFALCKQLKSTEATCIFTAEVKDDNPRS
                     SRDGLVEYVSDGVIGLRFNERENGE"
BASE COUNT          798 a         1237 c         1303 g          628 t
ORIGIN      
        1 cctcgcggac gagaccggca agacccagtt cagcgcgtgg aaggacttcg acctgaaggc
       61 cgaagaagtc ctccggatcg agggagccta cgtcaagtcg tggcgcggca tcccgcagat
      121 cagcttcgac gaacgcgcga cgatcacgcg cctcaagtcc gacctccttc cgccggcgaa
      181 cgtgctgaac gcgagtccgc ggatgtggat cgaggacctc gcggagcgcg ggggtggcgc
      241 ggacgtcacc gtgcgaggga tcctgatcga cctccgcgaa ggttccggcc tggtataccg
      301 ctgccccgaa tgccgacggg tcctccggaa aggcgcctgc cggcttcacg gcgaggtcaa
      361 aggcgagccc gacttgcggg tgaaggccgt cttggacgac ggttccgggg ccgtgacggc
      421 ggtcttcgac cgcgagctca ccgaggccct cctggacaag acgctcgacg cgtgcatcgc
      481 cgccgcgaag gaagcgatgt cgaccgacat tgtccgggat gaactcgcgg acgtgctcgt
      541 ggcccaaccg atcgaggtcc gtggaaacgt tacatcggac gactacggcc tgatgatgat
      601 cgtggaatcg gcgaagatgc tgaaggtgga cgtccaggcc gaggcccgcg aaatgctcga
      661 agggctggag gggtccacgt gatgcgcgag gtcgcttggc ggctcttcgc ctccgagtac
      721 aacgacgcga atctcgagat ggacggcggc ggcgatcggg cgccgtcgta catcgtcacg
      781 ccgctgggag cgaaggtgaa tcgcgtcttc gtcgtcggcg tgatcacgga cgtcgagaac
      841 gtcgggagcg acgtccaacc gatgtggcgc gcccgcgtct ccgacccgac gggcacgttc
      901 cacatctacg cgggccagta ccagcccgag gccgcggcga cgctctcgaa gctcaagccc
      961 cccgtcttcg gggcgatcgt cgggaagagc cgcatctact cgcccgaggc ggggacggtg
     1021 ttcacgtcga tccggcccga gcgaatcaaa ccggtcgacg aggcggtccg agactactgg
     1081 atcctcgaag cgtgccgctc cctccggaag cggctcgaca cgatggccga ggcccggaag
     1141 atggacccgc tcacgaaaga aggcctcgcc aagatgggcg tcaaggaggc aatcgcggac
     1201 ggaatcgtgc aggccgtgaa ccactacggg acggtggacc tgtctcgcta caccgcgatg
     1261 cttgcggaag gactgcgata tctcttgccg gagtaccgcg agccggccga tccgagagac
     1321 gccaccccgg aacccgtctc cgccgcgaaa gaggaagcac cgagtgagcc cgacgagacg
     1381 gagtcgaagg tcctcgcgat catcacgacg ctggacaaag acggcaaggg tgcgccgtgg
     1441 gaaggcatcc tggaggccgc cgtctcgaag agcgttgcga aggacgcgtt ggaggaatcg
     1501 atcaactccc tcctcgacaa gggcctcatc tacgaaccga tcctcggtcg gatgaagaaa
     1561 atctgatacg cccgcctacg tgggcgggag atacgaccgg caggaccagc acttgcgggc
     1621 cgacatgccg accttcgcgc cgcacttgag acatcggcgc atcttcgggg cgcggtccgt
     1681 gagacgctcg attcgcttga ggccgagctt cccggacgcc gcgccgccga ggccgcacgc
     1741 cgcgccaaac acgaggaccg tgatgaacga gactcccgtg agccagaccg gtacgccggc
     1801 ggtcaacggc cagcccgcgg gcaggaagag cgcctggaag gcgtagacgc cgacgatgcc
     1861 tccgatcaac gcacccatga agcccaggga gccgatgaac gtcgtccgcc cggagaacac
     1921 gccaacggcg aagagggcga aggggaagta gaagtacgcg aggtctcgtg ggaggaacag
     1981 gatggggatg ccgacgagga acgacagggc gaccgtgccg aggatcgtga tgccgaatcc
     2041 tgcgagtggg ttgcgaacgg agaccatggt tcctccgggc tccctcgcga cgtccggcgg
     2101 accatttcaa cgtgccggca tcgctggtcg gaactgataa tcagcatcct cccggacgct
     2161 cgcgccgagg tcacctatgc gttgacaaag gcgcacccgg tgggaagacg cttcgagccg
     2221 tcgcgtcgtt tcgaggagtc accaaacgtc cacttaggat tcggaagggc caaagccatc
     2281 cgcgtccagc cccggggagg acgataaata tccaatttcc aagataatat ggatgcagcg
     2341 gtccgtcgcc tccgtccaca ggatcgcccc gcacgacgcg accgtttaca aaagtgcttt
     2401 atcgggtggc gtcggattcg cacggggatt gggatggctc taccgcggga tagcatctac
     2461 ctcagtgtgg atgcgttgcc ggaaccgctc gaacgcgtgc gggtccgcaa ggtcccgacc
     2521 gggattgccg acctggacag catcgtggac ggcggtttcc cgagcggatc gacgatcctc
     2581 ctctggggcg acatcggggc cgggatgcag gaatacgtct acacggccgg gtccaagacc
     2641 gcgctcgtga atgagcgtcc agaggcgcgg cactactacc tcggggaccg atgcgacgac
     2701 tccgacctcc cgacccaggt ctgttatgtg acgttctccc ggtcgaagga catcatccta
     2761 caggagctcg cgacgtcgtt caacggcgac tactaccgcg ctttccggga tcacacggtg
     2821 ttcaaggact tctcgagcgt ctattttcgc cacagcgtgg tacccgccac gtggacgaac
     2881 gaagatgacg tgttcgaccg cccatccacg aatatcctgg aggaactcgt cgccttcttg
     2941 gacgagaatg cgcacgactc gatggtcgtc atcgactcca tcacggacct tgcggtttcg
     3001 gacatcgtcg agatcaagga ccttgtgacg acgatcaagg gtctccagcg agtcgcgaag
     3061 cgatggaacg gcctcgtcta cctgatgctc acgcggggga tcctcgaacg gcggcacgaa
     3121 tcgctcctaa tggacagcac cgacggctgc cttgtgttcg agtggcggac ttcgacgcgg
     3181 tcgagcaacc gccagcggta catgtacctc gagaagttca cgggggtgct accgcacctg
     3241 ccgcgggata agatcgcccg cttccccacg atggtgtcgt cgaacaccgg tcttgtcgtc
     3301 gtgtacatgg aacggatctc ctgaggtggg acaatcgtcg agacggaagc agaaccggcc
     3361 gcgagggacg cgggggacat tggccatcca ggcggcttcg tactcacagg catcgacggc
     3421 ctcgatgaga tgctcgggcg cggcgtgccg accggacaca tcatcacggt cctcggttcc
     3481 ttcggcaccg ggaagacgac gttcgcgctc cagttcttga tgcagggcct gatcaacggc
     3541 gagaaggcga tcttcatctc cctggaagaa gacgccgact cggtcatcgc gaacgccgcg
     3601 tcgttcgggt gggacctgcc caagtacatc aaggagaaga aactccacat cgtcaagttg
     3661 gagcctgcgg atgccaagac gaccgtcact cggatccggt ccgagcttcc ggacttcatc
     3721 aagcgaagcg gggcgtcccg ggtcgcgatc gactccgtca gcctcttgaa catgctcttc
     3781 gcggacgaca aggagcgtcg cgagaagctg ttcgcccttt gcaagcaact caagtcgacc
     3841 gaggccacgt gcatcttcac cgccgaggtg aaggacgaca acccgcggtc ctcccgagac
     3901 ggtctcgtcg agtacgtgtc cgacggcgtc atcgggctgc gcttcaacga acgggagaac
     3961 ggggag
//
LOCUS       DATLMA010000135         1333 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_73448, whole genome shotgun sequence.
ACCESSION   DATLMA010000135 DATLMA010000000
VERSION     DATLMA010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73448"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VNA10_01710"
     CDS             complement(<1..779)
                     /locus_tag="VNA10_01710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016753807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HVG36427.1"
                     /translation="MAVTLGSRVTLNNGNTMPVLGLGMWQAGSGKQTRKAVATALEIG
                     YRLFDTAKLYGNESDLGTAIRESGIRREEIFVTTKLWNNDQGNESALRAFEKSRRELG
                     LDYVDLYLIHWPVPGLRQESWKALLKIRDEGLARSIGVSNYTIRHLEELLRSTPDPPA
                     VNQVEFHPFLYQKELLEFCVGKKIQLEAYSPLTRGHRLDHPVISQIAARHGRTPAQVL
                     IRWSLQHGLVVIPKSIRPERIRENAAVFDFQLSPDDMKRLDS"
     gene            complement(825..>1333)
                     /locus_tag="VNA10_01715"
     CDS             complement(825..>1333)
                     /locus_tag="VNA10_01715"
                     /inference="COORDINATES: protein motif:HMM:NF020253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HVG36428.1"
                     /translation="LGEKLWDAVMGAGAKYDIRPVAPSEIRRIEAGILNYSSDIMLDN
                     NPYEVGLGWTVDEDKRADYLGKAALARIKKEGLKRKLVGVEVEGAPLGAWIPDYWDVH
                     ADGRKVGHVTSLTYSPRLEKNIGYALLGIDHSKIGTRLRVSTSKGTRAAIVVKKPFVD
                     PKKDIPKS"
BASE COUNT          224 a          423 c          418 g          268 t
ORIGIN      
        1 gaatcgagtc gcttcatgtc gtcggggctc agctggaaat cgaacacggc ggcgttctct
       61 cgaattcgct ccggacggat ggacttcgga atgacgacga gcccatgttg caggctccaa
      121 cgaatgagga cctgggccgg cgtccgaccg tgcctcgccg cgatctgaga aatgactgga
      181 tgatcgagtc gatgaccgcg agtgaggggg ctgtatgctt ccaattgaat cttcttgccg
      241 acgcagaatt ccagcaattc cttctgatag aggaagggat ggaactcgac ttggttcacg
      301 gcgggcggat ccggggtcga gcggagcagt tcctccaggt gtcggatcgt gtagttgctc
      361 accccgatcg accgggcgag tccctcgtcc cgaatcttga ggagcgcctt ccacgactcc
      421 tgtctcagac ctggcacggg ccagtggatg aggtacaggt caacgtaatc gagaccgagc
      481 tcgcggcggc tcttctcgaa cgcccggagg gcggactcgt tgccctggtc gttgttccag
      541 agcttcgtcg tgacgaagat ctcttcgcgt cggatcccgc tctcccgaat cgcggttccg
      601 aggtcgctct cgttcccata caatttcgcg gtatcgaaca gacggtagcc gatctcgaga
      661 gcggtcgcga ccgccttgcg ggtctgcttg cccgagccgg cctgccacat accgaggccg
      721 aggaccggca tcgtgttccc gttgttgagg gtgacgcggg atccgagggt gacggccatc
      781 cgggagccga cggcacgcgc gctacttcaa ccttgaccgg accatcacga cttcggaatg
      841 tccttcttcg ggtcgacgaa gggcttcttc acgacgatgg cggctcgggt ccccttcgac
      901 gtggacaccc gcaaccgggt cccgatcttc gaatgatcga tgccgaggag cgcatagccg
      961 atgttcttct cgagccgcgg cgagtacgtc agcgaggtga cgtggcccac cttccgaccg
     1021 tccgcgtgga cgtcccagta atccgggatc caggccccga ggggggcgcc ttcgacctcg
     1081 acaccgacga gcttgcgctt gaggccctcc ttctttatcc gagcgagcgc ggccttcccg
     1141 aggtagtctg cccgcttgtc ctcgtccacc gtccagccga ggccgacctc gtacggattg
     1201 ttgtcgagca tgatgtccga gctgtagttc aggatccccg cctcgatccg gcggatctcg
     1261 gacggggcga ccggccggat gtcatacttg gcccctgcgc ccatgaccgc gtcccagagc
     1321 ttctcgccga gcc
//
LOCUS       DATLMA010000136         1120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_675761, whole genome shotgun sequence.
ACCESSION   DATLMA010000136 DATLMA010000000
VERSION     DATLMA010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675761"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..935
                     /locus_tag="VNA10_01720"
     CDS             207..935
                     /locus_tag="VNA10_01720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HVG36429.1"
                     /translation="MARALWSGAIAFGLVNIPVKLYGATETKDLSFTTLHATCMTALK
                     RPYICPKDNVPVDSKEMVKGYEYAKGQYVILKDEDFEKIPLEATKALEVAGFVDASEI
                     SPLYRERNYYLGPEEISLKPFELFRQALMRTGKVALARAVLWKKEQLVAISPYNGSLV
                     LTTLMYQDEVKPPPEIPATRPVVISDAEIDLALQLIKTLVTEFDASKFRDRYRDALWP
                     SSRRRSKARSCLSSRRLRPSPPRT"
BASE COUNT          229 a          347 c          350 g          194 t
ORIGIN      
        1 tcgagtcgct cgacccgggt atggggctcg acggaggtcc gctcaattcg gccagtaact
       61 gcgcgtgcat tccgatatcg tttgcggtcg gccgcggacc ataccggccc cttcggtgaa
      121 atcaacctta aacaaggtta acgcgtggag gacaaattgt taagtgcctc gcggcccttc
      181 gtttggcctc cgctggagga cccgatatgg cccgagcctt gtggagtggc gcgatcgcat
      241 tcggcctggt gaacatcccc gtcaagttgt acggggcgac ggagacgaag gacctctcct
      301 tcacgacgct ccatgctaca tgcatgaccg cgctgaagcg gccgtacatc tgcccgaaag
      361 acaacgtccc cgtcgactcg aaggagatgg tgaaaggcta cgagtacgcg aaaggccagt
      421 acgtgatcct gaaggacgag gacttcgaga agatcccgct cgaggcgacg aaagcgctcg
      481 aggtcgcggg cttcgtcgac gcctcggaga tctccccgct gtaccgggag cggaactact
      541 acctcgggcc cgaggagatc agtctgaagc cgttcgagct gttccgccag gcgctcatgc
      601 ggacgggaaa agtcgccctc gcccgcgcgg tcctgtggaa gaaggagcag ctcgtcgcga
      661 tctcgcccta caacgggagc ctcgtcctca cgacgctgat gtaccaggac gaggtgaagc
      721 cgccacccga gatccccgcc acccgacccg tcgtgatctc ggacgcggag attgacctcg
      781 cgctccagct catcaagacg ctcgtgacgg agttcgacgc atcgaagttc cgggaccgtt
      841 accgggatgc attatggccc tcatccaggc gaaggtcgaa ggcaaggagt tgcctttcgt
      901 cacgaagatt gagaccaagc ccacccagga cttgatggcc gccttgaagg cgagcctcga
      961 ggccgcgaag gccagttgaa cggatggcgt cgttcgaccc gtacctccac gtcatcaagc
     1021 cgatgctcgc ggagagccgc gagactccct tcgattcgaa ggaccacatc ttcgagctga
     1081 agtgggacgg gacccgggca ctcgcggtcg tacgggacgg
//
LOCUS       DATLMA010000137         1821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_856436, whole genome shotgun sequence.
ACCESSION   DATLMA010000137 DATLMA010000000
VERSION     DATLMA010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856436"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VNA10_01725"
     CDS             complement(<1..413)
                     /locus_tag="VNA10_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36430.1"
                     /translation="MSWEKEEKEKGMTRRDWVRVGMAAGAVGAVLGLGGLSIGQILPP
                     PLKFEGEIRETIQYTKFPPTDPTADLWWNTKAGTAVKVSDFDRDWKGATGVWRGLYQN
                     NQWVPGTGFPCLIIRVKRENQYFSYPDAAHMPAAL"
     gene            complement(424..717)
                     /locus_tag="VNA10_01730"
     CDS             complement(424..717)
                     /locus_tag="VNA10_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36431.1"
                     /translation="MTELIRSDAPRRSAMAALALGGLIIGVLWFSILTVIIALQDLSG
                     ISDSQTDSYMALFMGMVFLLLAFAIDIYRKEFMPDELIHKIRRPKIVLTRPFR"
     gene            complement(714..1352)
                     /locus_tag="VNA10_01735"
     CDS             complement(714..1352)
                     /locus_tag="VNA10_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36432.1"
                     /translation="MRNFVLLVTAVLVAIFMVPPAISVASATPAAPGLAVSPKLYVTV
                     GVDQGGATHFLPATIIIPQVNITLNITFVNNYTVGGGMVHTFSIDNSDRTAQEITTGN
                     LNPGQNVSIEFHINSLTNITHNGTSFTPESSGQGIRWYCVPHRAAGMTGEILLAGLTA
                     PTPEKGILIRAYWIGIIGIAATLAWTIVSYFIIKSSSRHFKDHSEHLRKGLP"
     gene            1639..>1821
                     /locus_tag="VNA10_01740"
     CDS             1639..>1821
                     /locus_tag="VNA10_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36433.1"
                     /translation="MSKEETLQRIKQVEAQIRTMKGEAEREREATLRNARREALELTE
                     QFQEKAEARYREIVSAA"
BASE COUNT          366 a          532 c          571 g          352 t
ORIGIN      
        1 tggagcgcag cgggcatgtg cgccgcgtcc gggtacgaga agtactggtt ctcccgcttg
       61 acccggatga tgaggcacgg gaagccggtg ccggggaccc actggttgtt ctggtacagg
      121 ccgcgccaga cgccggtcgc ccccttccag tcccggtcga agtccgagac cttgaccgcg
      181 gttcccgcct tcgtgttcca ccagaggtct gcggtcggat ccgtcggagg gaacttcgtg
      241 tattggatcg tctcccggat ctcgccttcg aactttagcg gcggaggcag gatctggccg
      301 atcgacaggc ctccgaggcc gaggaccgcg ccgacggcgc cggcggccat gccgacgcgg
      361 acccagtccc gtcgggtcat gcctttttcc ttttcctctt tctcccagct catcgaggcc
      421 tcctcatcgg aacggtctcg tcaggacgat tttcggcctt cgaatcttat gtatcagctc
      481 gtccggcatg aactctttgc gatagatgtc gattgcgaag gcgagcagga ggaagaccat
      541 ccccatgaac agcgccatgt acgagtcggt ctggctgtcc gagatcccgg acaggtcttg
      601 caacgcgatg atgacggtca ggatgctgaa ccacaggacg ccgatgatca acccgccgag
      661 cgcgagcgcc gccatggcac tccttcgagg ggcgtcgctc cggatcaact cggtcatgga
      721 agccccttcc gcaggtgctc ggagtgatcc ttgaagtgcc ggctcgagga cttgatgatg
      781 aagtagctga cgatcgtcca ggcgagcgtc gcggcgatgc cgatgatccc gatccagtac
      841 gcacggatga ggatcccttt ctccggcgtc ggggccgtca atccggcgag gaggatctcg
      901 cccgtcatcc cggcggcgcg gtgcgggacg caataccaac ggatgccctg gcccgaggac
      961 tccggcgtga aggaggtccc attgtgggtg atgttcgtga ggctattgat gtgaaactcg
     1021 atgctgacgt tctgccccgg gttcaggttc ccggtggtaa tttcctgagc cgtgcgatcg
     1081 gagttgtcga tcgagaaggt gtggaccatc ccgccgccga ccgtgtaatt gttgacgaac
     1141 gtgatgttca acgtgatgtt gacctgcggg atgatgatcg tcgcgggcag gaagtgcgtg
     1201 gccccgcctt gatccacgcc gaccgtgacg tacagcttcg gactcaccgc cagccccggg
     1261 gccgcgggcg tggccgatgc aacggaaatc gcgggtggca ccatgaaaat cgcgaccaga
     1321 acggcggtca cgaggagcac gaagttcctc atcccaggat cctcttactc ccgatcccat
     1381 ctagagactt tcgggcaatc gcgaaaaaga gcgttcccta tttatacgtt gtgcacgagt
     1441 caatttttcc tccctagaat cgcgtcgctg tgagtcaatt tttcatgggt caagtgcggt
     1501 agcgagttgc atctactcga aatgataaaa agcgacagat aaaaatgcgc gcggcgccgt
     1561 gacgcgcgag catcggccat cgatgcgcac tcgacgaaaa cctttaaaga cgagcctagt
     1621 tctccccgaa cgttccgcat gagcaaagag gaaactctcc agagaatcaa acaggtggag
     1681 gctcagattc gaacaatgaa gggagaggcg gaacgggagc gtgaggccac cctgcggaat
     1741 gcgagacggg aagcgctcga attgaccgaa cagttccaag aaaaggccga ggcgcgctac
     1801 cgcgagatcg tgagcgcggc c
//
LOCUS       DATLMA010000138         1298 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_736756, whole genome shotgun sequence.
ACCESSION   DATLMA010000138 DATLMA010000000
VERSION     DATLMA010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736756"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..>1298)
                     /locus_tag="VNA10_01745"
     CDS             complement(169..>1298)
                     /locus_tag="VNA10_01745"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HVG36434.1"
                     /translation="MTLIKTLPTIVSAFRESVKSFRGGVGPAEGVKRTERDLGMGVVI
                     IGSLAIVLVLAILPGFPHGPFPGSLLMSLLIVVFGFFFVTVSSRIVGIIGTSSNPISG
                     MTIATLMATCVVFVVIGWRGDVYQAVALCVGAIVCVAAANAGATSQDLKTGYLVGATP
                     RSQQIGFVIGVVSSAFVIAITLFMLDRTYRGPNEIHGIGGPQLPAPQATLMATIIKGL
                     LAQNLPWAPVLVGVFLAFMAQLAGAHALSWAVGAYLPVSTTAPIWIGGMVKAWVDAWR
                     RRKERTAVGEESELSSGMLYATGLVAGGSLGGVLIAFVAFFGDTVLHMERPSLLEKLD
                     LGTKLYPGLKSGLVSGGILCAVAFAVLIFLLERNARKRLEG"
BASE COUNT          253 a          424 c          431 g          190 t
ORIGIN      
        1 tttccgagct tccggttcga gcccctggag caaagctatc gacgcctgtc gcggaaccga
       61 taccgctacg cgagcgcggg agggcgattc gagaccgacc tcgaggtcga cgagaacggc
      121 ttcgtgaccc gatatccggg tttctgggaa acggtgcgat gagcggctct acccctccag
      181 ccgctttctc gcgtttcgct cgagaaggaa gatgagcacc gcgaacgcga ccgcgcagag
      241 gatcccgccg ctgacgagcc cgctcttcaa gcccggatac aacttcgttc ccagatcgag
      301 tttctccagg agcgacgggc gctccatgtg gagcacggtg tcgccgaaga acgcgacgaa
      361 agcgatgaga actccgccga gcgaccctcc cgcgacgagc ccggtggcat agagcatccc
      421 ggaggagagc tcgctctctt cgccgacggc ggttcgctcc ttccgccgcc tccaggcgtc
      481 gacccaggcc ttcaccatcc cgccgatcca gatcggcgcg gtcgtcgaga ccggaaggta
      541 cgcgccgacc gcccaggaaa gcgcgtgcgc tccggcgagt tgcgccatga acgcaagaaa
      601 gactccgacg agaacgggcg cccaaggcag gttctgcgcg aggaggcctt tgatgatcgt
      661 cgccatcagc gtcgcctgcg gggcgggaag ctgtggtccg ccgatcccgt ggatctcgtt
      721 cgggccgcgg tacgtccggt cgagcatgaa gagcgtgatc gcgatgacga aggcggagct
      781 gacgaccccg atcacgaatc cgatctgctg ggagcgcggg gtggcgccga cgaggtatcc
      841 ggtcttcagg tcctgcgacg tcgctccggc gttcgccgcg gcgacgcaca cgatcgcgcc
      901 gacgcagagg gccacggcct ggtagacgtc gccgcgccag ccgatgacga cgaacacgac
      961 gcacgtcgcc atcagggtcg cgatcgtcat ccccgagatc gggttggagg acgtcccgat
     1021 gatgcccacg atccgggagg aaacggtcac gaagaagaac ccgaagacga cgatcaggag
     1081 cgacatgagg agagagccgg ggaacgggcc gtgcgggaag cctggaagga tcgccagcac
     1141 gaggacgatc gcgagcgacc cgatgatcac gactcccatg ccgaggtctc tctcggtccg
     1201 cttgacgccc tccgctggtc cgacaccgcc ccggaagctc ttgaccgact cccggaaggc
     1261 cgaaacgatg gtcggcagcg tcttgatgag agtcatca
//
LOCUS       DATLMA010000139         1275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_74129, whole genome shotgun sequence.
ACCESSION   DATLMA010000139 DATLMA010000000
VERSION     DATLMA010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74129"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..963)
                     /locus_tag="VNA10_01750"
     CDS             complement(<1..963)
                     /locus_tag="VNA10_01750"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HVG36435.1"
                     /translation="MGEPKLREKAWEPAYEEDILKAWRAEPDLVRFAPEPGQPTYVID
                     TPPPYPSGAWHVGAVMAYAMIDMIARAQRMLGRAVLFPFGLDRNGINIERTVEKKTGK
                     ALHRWDREAFIQECRKEIEAIGNGLLELAVRVGMSADFEHTYYTDSDEYRAFSQAIFL
                     ELWPKGLFYRGERPTFWCPVCETPLAEADIDYEERPSNLVWIKFPLTSKGEIRIATTR
                     PELLAACRAVIVHPDDARFASLQGKKARVPLYNQEIPILAHPTARQEFGSGAAMICSY
                     GDMVDLQLFRELRLEPVKAIDEHGKMTDAAGPLKGLKVEAAREKA"
     gene            1091..>1275
                     /locus_tag="VNA10_01755"
     CDS             1091..>1275
                     /locus_tag="VNA10_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36436.1"
                     /translation="MEIGCGARVRDFEGRRYFYFWHYERANGHSMRREEYVGRVDSEK
                     AKADLLRRMAAYHRKAE"
BASE COUNT          211 a          410 c          405 g          249 t
ORIGIN      
        1 cgccttttcg cgggcggcct cgaccttcag tcccttcagc ggccccgcgg cgtccgtcat
       61 cttgccgtgc tcgtcgatcg ccttcacggg ttcgagcctt agttcgcgga agagctggag
      121 gtccaccatg tccccgtacg agcagatcat cgccgcgccg ctcccgaatt cctgcctggc
      181 ggtcggatgc gcgaggatcg ggatttcctg attgtataac gggaccctgg ctttcttccc
      241 ttggagactc gcgaaccgtg catcgtcggg atggacgatc actgcgcggc atgccgcaag
      301 cagttccggt cgtgtcgtcg cgatccggat ctctcccttc gacgtcagcg gaaacttgat
      361 ccacacgaga ttcgagggcc gctcctcgta atcgatgtcg gcctccgcga gcggcgtctc
      421 gcagacggga caccagaacg tcgggcgttc gccgcgatag aacagacctt tcggccagag
      481 ctcgaggaag atcgcctggc tgaaggcgcg gtactcgtcg gagtccgtgt agtacgtgtg
      541 ctcgaagtcc gccgacattc cgacgcgcac ggcgagctcg agcaggccgt tgccgatcgc
      601 ctcgatctct ttgcggcact cctggatgaa ggcctcccgg tcccagcgat ggagcgcctt
      661 gcccgtcttc ttctcgaccg tccgctcgat gttgattccg ttccggtcga ggccgaacgg
      721 gaagaggacc gcgcgaccga gcatgcgctg cgcgcgggcg atcatgtcga tcatcgcgta
      781 cgccatgacg gcgccgacgt gccacgcgcc gctcggatac ggtggcggcg tgtcgatgac
      841 gtacgtcggc tgtccgggct ccggggcgaa acgaaccaaa tccggctcgg cccgccacgc
      901 cttcaggatg tcctcctcgt aggccggctc ccacgctttc tcccggagtt tcggttcacc
      961 catcgacgtc cgtcgagagt cgcggagccc ataaaaggat tgttccgccc gactccctcg
     1021 agtcgattca cacacctcat cgaaggcttc aagacggtgt gcgatatacc tctacttaga
     1081 ggtatagacg atggagatcg gctgcggtgc gagggtccgg gatttcgaag gccggcggta
     1141 cttctacttc tggcactacg agcgcgcgaa cggtcattcg atgcggcgcg aggagtacgt
     1201 gggtcgggtg gactcggaga aggcgaaggc ggatctcctg aggcgcatgg ccgcctacca
     1261 ccggaaggcc gagca
//
LOCUS       DATLMA010000140         1260 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_74156, whole genome shotgun sequence.
ACCESSION   DATLMA010000140 DATLMA010000000
VERSION     DATLMA010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74156"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VNA10_01760"
     CDS             complement(<1..191)
                     /locus_tag="VNA10_01760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36437.1"
                     /translation="MRRLRRIEAGYRAEIRRAQQSLKGTTMDRVKAERKFKKIRAKLE
                     AKIGKVQPKIKALTNLKAER"
     gene            complement(258..686)
                     /locus_tag="VNA10_01765"
     CDS             complement(258..686)
                     /locus_tag="VNA10_01765"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HVG36438.1"
                     /translation="MGVEDEFEETRRAIHRMLKDAFEGKLGVFREPFIYGFTTRSRES
                     RTETARPALEGEEIRTRDPLVDVILTESAIFLTAEMPGVAREGVRVRLEEGKLVLQGE
                     GDRQYFTKVDLPIDADRDTLKYTYTNGVLDVVIARNRSVM"
     gene            complement(840..>1260)
                     /locus_tag="VNA10_01770"
     CDS             complement(840..>1260)
                     /locus_tag="VNA10_01770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36439.1"
                     /translation="SRGGLRTTFICLPPVQRRESMVEVTFLSSVQGYQEDRVEEVVKR
                     LRAEHPEWTVEILPPEASKPLFAKYKLQFGPAILVDNRIEFVGIPRYRMLVERIAMIA
                     AGKISPRTAQPPATAAPAPRPAAPANPPPSPERKASS"
BASE COUNT          191 a          412 c          401 g          256 t
ORIGIN      
        1 cgctcggcct tcaggttcgt gagcgccttg atcttcggtt ggaccttgcc gatcttcgcc
       61 tccagtttcg cgcggatctt cttgaacttc cgctccgcct tcacgcggtc catcgtggtc
      121 cctttcaggc tctgctgggc ccgacggatt tccgcgcggt agcccgcctc gatgcgtcga
      181 agtctccgca actttcgatc ggccttgtcg tcggagggaa ttcggacacc tcccgtcccc
      241 cgcccgaagg acccgattca catgacggac cggtttcggg cgatgaccac gtcgaggacg
      301 ccattggtat aggtgtactt cagcgtgtcg cggtccgcat cgatcgggag gtcgaccttc
      361 gtgaagtact ggcggtcccc ctccccctgg aggacgagct tgccctcctc gaggcgcacc
      421 cggacgcctt ccctcgcgac gccgggcatc tccgcggtca ggaaaatcgc ggactccgtc
      481 aagatcacgt cgacgagcgg atcccgtgtg cggatctcct cgccctcgag cgcagggcgc
      541 gcggtctcgg tgcgggattc gcgggatcgc gtcgtgaatc cgtagatgaa cggctcccgg
      601 aagacgccga gcttcccctc gaacgcatcc ttgagcatgc gatgtatcgc gcgacgcgtc
      661 tcctcgaact cgtcctcgac acccattggg gaatccttcc ttccctgact cggaccgcat
      721 tcgcggagcg cgcggtcccc tcgcttcaac cccgtggaat taatggtcgc gagatttcat
      781 atagttttcg cgaggcccga tcttccatcg gaacacgtgc cgcagacggt cgattccggt
      841 cacgaggacg ctttccgctc cggtgacggg ggcggattcg cgggtgcggc cggcctcggg
      901 gcgggtgccg cggtggccgg aggctgggcg gtgcgcggcg agatttttcc cgcggcgatc
      961 atcgcgatcc gctcgacgag catgcggtat cgggggatcc cgacgaactc gattcggttg
     1021 tccaccagga tcgcggggcc gaactggagc ttgtacttgg cgaagagggg cttgctcgct
     1081 tccgggggaa ggatttccac cgtccactcc gggtgttcgg cccggaggcg cttgacgacc
     1141 tcctctacgc ggtcttcctg gtatccttgc accgaggaaa ggaaggtgac ctcgaccatg
     1201 gactcccgcc gctgtaccgg agggagacaa ataaaggttg tgcgcaggcc gccacgggaa
//
LOCUS       DATLMA010000141         1313 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_856650, whole genome shotgun sequence.
ACCESSION   DATLMA010000141 DATLMA010000000
VERSION     DATLMA010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856650"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1264)
                     /locus_tag="VNA10_01775"
     CDS             complement(<1..1264)
                     /locus_tag="VNA10_01775"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG36440.1"
                     /translation="MDGTWDAVIVGGGHNGLVSAAYLARAGFKVLVLERRHIVGGACI
                     TEEVFPGVKFSRLAYSAGLLRPEIVRDLDLARFGYEVHAFDPQFFLPFPDGDSMLLWN
                     DAERNHKELARFSKKDAAAYPKYVAFWTDVMELIEAMVLESPPPLPDLLGMFKGAEAE
                     ELAKRLLLQSAADLLDEFFESDEVKAMLATATTIGLPAGPRTPGTALMLGHMLLHEIN
                     GVKQTFGYSKGGMGGISAALAKAAAHHGAKIETSASVRHIVTADGRVTGVELEGGRQV
                     MARVVLANVDVKTTFEKLVSPDAVDPEFLAQVRRIKATGVVTKVNCLLSELPDFTARP
                     GKTVQPHHRGYLDICPSVDYLERAWDDAKWGRPSTEPFLDCVLHSVTDPSLAPPGKVT
                     LSIYSQYSPYHLRDGEWDDRKDEVGDIIL"
BASE COUNT          224 a          414 c          437 g          238 t
ORIGIN      
        1 cgaggatgat gtcgccgacc tcgtctttcc gatcgtccca ttcgccgtct cggagatgat
       61 agggagagta ttgcgagtag attgacaggg tcaccttccc cggaggcgca agactcgggt
      121 ccgtcaccga atgcaagacg caatcgagga acggttcggt cgaaggccgg ccccacttcg
      181 catcgtccca ggcccgctcg aggtagtcga cggacgggca gatgtccagg tagcctcggt
      241 ggtgcggttg gaccgtcttg ccgggtcggg ccgtgaaatc cgggagctcg ctcaggaggc
      301 agttcacctt cgtcacgacg cccgtcgcct tgatgcggcg gacctgagcg aggaactcgg
      361 ggtcgaccgc gtccggggag acgagtttct cgaacgtcgt tttcacgtcc acgttcgcga
      421 gcacgacccg ggccatcacc tgccttccgc cttcgagctc gacgccggtc acccggccat
      481 cggccgtgac gatgtgacgg accgaagccg acgtctcgat cttcgcccca tggtgggcgg
      541 ccgctttcgc cagcgccgca gagatgccgc ccatgccgcc cttcgagtat ccgaaggtct
      601 gcttgactcc gttgatctcg tggagcagca tgtggccgag catgagggcg gtaccgggcg
      661 tccttggccc ggcggggagg ccgatcgtcg tggcggtggc gagcatcgcc ttgacctcat
      721 cggattcgaa gaactcgtcg agcaggtcgg cggcactttg caagaggagg cgcttcgcca
      781 gctcttccgc ctcggcgcct ttgaacatcc cgagcaagtc gggcaacggc ggcggggatt
      841 cgaggaccat cgcctcgatg agctccatga cgtcggtcca aaaggccacg tacttgggat
      901 aggccgcggc atctttcttc gagaaccgcg cgagttcctt gtggttccgc tcggcgtcgt
      961 tccacaggag catcgagtcg ccgtccggga atgggaggaa gaactgcgga tcgaacgcgt
     1021 ggacctcgta gccgaaccgc gcgagatcca ggtctcgaac gatttccggc cgcaacaggc
     1081 cggccgaata cgcgagccgc gagaacttga cgccggggaa gacctcttcc gtgatgcagg
     1141 cccctccgac gatgtgtcgt cgttcgagga cgaggacctt gaatccggcc ctggcgaggt
     1201 acgccgcgga gacaaggccg ttgtggccac cgccgacgat tacggcgtcc catgtgccgt
     1261 ccacggtccg cggagtgcgg gacacctacg tatcgttagt ggcgatcgct ccg
//
LOCUS       DATLMA010000142         1422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_737066, whole genome shotgun sequence.
ACCESSION   DATLMA010000142 DATLMA010000000
VERSION     DATLMA010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737066"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="VNA10_01780"
     CDS             <1..669
                     /locus_tag="VNA10_01780"
                     /inference="COORDINATES: protein motif:HMM:NF036799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HVG36441.1"
                     /translation="AYRLDLLHEVDLAEDLAIAFGYDRYPRGLPHRQTIGESLAANDF
                     AETLRVLLVGYGYQEVMSLTVASRKEAFETPDRVVIRNPLNEDLTTLRSSMLPALMNI
                     FRLNKHRELPQRIFEISDVVLESRNVRRIGAAAIHHKASFTEAKSLVLSLMRDVGRST
                     EVRAVEDRNFIPGRAASVLVDGREAGRFGEIHPRILEAYALVQPVLAFELDVDPLRGP
                     DSSH"
     gene            766..>1422
                     /locus_tag="VNA10_01785"
     CDS             766..>1422
                     /locus_tag="VNA10_01785"
                     /inference="COORDINATES: protein motif:HMM:NF014133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAP domain-containing protein"
                     /protein_id="HVG36442.1"
                     /translation="MADDSSPPPPGDPTELAVDLCPNCGGKLKFSENRPEGLCPSCGI
                     FVEVLRPSASKPRAPVRPLPPKIKIRTGTVRELQVLCHKYGLPSDGTKADLVARLLFY
                     IDEQGWQAKVAAGQAEKPASTPTEDVASRKQWAKFFLNYESEVGEEGLEPEDEKPVPE
                     EPSPAKGAESTPETPVAPQAETVPVETVTAPSPETAPEAKPPEALPEPGLPEDRARKG
                     P"
BASE COUNT          269 a          460 c          467 g          226 t
ORIGIN      
        1 gcgtaccggc ttgatctctt gcacgaggtc gacctggcgg aagacctcgc gatcgccttc
       61 ggatacgacc gatatccacg gggcctcccg caccgccaga cgatcggcga gtcgctggcg
      121 gcgaacgact tcgcggagac cctgcgcgta ctcctcgtcg gctatggata tcaagaagtc
      181 atgtcgctga ccgtagcgtc ccggaaggag gcgtttgaga cgccggaccg cgtggtgatt
      241 cggaacccgc tgaacgagga cctaacgacc ctgcgctcgt cgatgctgcc ggcgttgatg
      301 aacatcttcc ggttgaacaa gcaccgcgaa ctgccgcagc ggatcttcga gatctcggac
      361 gtcgtgctcg agtcgaggaa cgtgcggcgg atcggggcgg cggcgatcca tcacaaggcc
      421 tcgttcaccg aggcgaagtc gttggtcctc agcctgatgc gggatgtcgg gcggtccacg
      481 gaggtgcgag ccgtggagga ccgcaatttc attccgggac gcgccgcctc cgtcctcgtc
      541 gacggccgcg aagccggtcg tttcggggag atccatccga ggatcctcga agcgtacgcc
      601 ctggtgcagc cggtcctcgc gttcgagctc gatgtggacc ccctccgagg tccagattcg
      661 agccattagg cgtactccaa ggcccctgct atctttcgcg attctcagta ctaaaagtca
      721 gccaagcgag tttatgggcg gctaggccga ccgctcttcg actcgatggc cgatgattca
      781 agtcctccgc ccccggggga ccccacagag ctcgcggtcg acctctgccc gaactgcggc
      841 ggaaagctga agttctcgga gaatcggccc gaagggctgt gcccgtcgtg cggcattttc
      901 gtggaagtcc tccggcccag cgcgtcgaaa ccccgcgcgc cggtccgtcc attgcccccg
      961 aagatcaaga tccgaaccgg cacggtgcgg gagctgcagg tcctctgtca caaatacggc
     1021 ctcccgagcg acggcacgaa ggcggacctc gtcgcccggc tgctgttcta catcgacgag
     1081 cagggttggc aagccaaggt ggcggcaggc caggcggaga agccggcctc gacacccacg
     1141 gaggacgtcg cgagccggaa acagtgggcc aagtttttcc ttaattatga gagcgaggtc
     1201 ggggaggaag gcctcgaacc ggaagacgag aagccggtac cggaggaacc atcgcctgcg
     1261 aagggcgcgg aatccacgcc ggagaccccg gtcgcaccgc aagccgaaac cgtcccggtc
     1321 gagacggtga cggccccttc gccggaaacg gccccagagg cgaaaccgcc ggaagcgctt
     1381 ccggagcccg gactccctga ggaccgagca cgcaaggggc cg
//
LOCUS       DATLMA010000143         1688 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_676412, whole genome shotgun sequence.
ACCESSION   DATLMA010000143 DATLMA010000000
VERSION     DATLMA010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676412"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..506)
                     /locus_tag="VNA10_01790"
     CDS             complement(189..506)
                     /locus_tag="VNA10_01790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36443.1"
                     /translation="MIIDAIHRFVVGDFFRLGGQLGPWAVLVGAVGIDPLAMGPVFLV
                     IGVAQVAAASLLLFRRPWGDVLVLAFAIGTLWYLLFGTISSMIQIALIVASKRRHVPV
                     AQP"
     gene            complement(579..>1688)
                     /locus_tag="VNA10_01795"
     CDS             complement(579..>1688)
                     /locus_tag="VNA10_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018759527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HVG36444.1"
                     /translation="ASPVAEARANPDDVAVLQYTGGTTGTSKGAMLTNRNLIANAMQV
                     AAWFSPGSHGPEKLLGAIPMFHVYGLTAVMLFSVVSGIEVVLYPNPREIGAILKLINK
                     TKPSLFPGVPTMYIAILRHPKLAKYDLRSIRSCISGAAPLPNEVRRQFEAATGGRLVE
                     GYGLTEASPVTHCNPMNGVVKECIGIPFPDTDAKIVDPDDPSRELPQGDVGELAVRGP
                     QVMKGYWRKPEETAMVLRNGWLVTGDLARMDEDGYFYIVDRKKDMILCSGYNVYPREV
                     EEVLFMHSAVGEAAAIGVPDAYRGESVKAFVVLKNGKTATQEEIIAFCKERLAAFKVP
                     KSVEFATALPLSLVGKVLRRQLREQELAKTKAASD"
BASE COUNT          304 a          568 c          530 g          286 t
ORIGIN      
        1 ctggtggacg gccgggtggc ggccgtctgg tcctccgagc gcacgagccg ccgactgcag
       61 attcgagtga agccgttcgc tccgctgccc gcggcggtcc gggccgcagt gcacgacgaa
      121 gcggaggacc tacgacggtt cctcgacgct cctgcgatct cgattcggtt cggttgagcc
      181 gagtcccgtt acggttgggc gacggggacg tgccgtcgct tcgaggccac gatcaacgcg
      241 atctgaatca tcgacgaaat cgtgccgaag aggagatacc acagggtccc gatggcgaac
      301 gcaagcacga ggacgtcccc ccacggacgg cggaagagca acagagaggc cgccgcgacc
      361 tgggcgaccc cgatgacgag gaagaccggg cccatcgcga gcggatcaat cccgacggca
      421 ccgaccaaca ccgcccacgg tcccagctgc ccgccgagcc ggaagaaatc tcccacgacg
      481 aatcggtgga ttgcatcgat gatcatgtag ccgccactga tgatcgcaag cgccgcagca
      541 gcgactgcgg tcctcggtac gggccgcgac attggtcttc agtccgatgc ggccttcgtc
      601 ttcgcgagct cttgctcacg tagctgccgt cgcaacacct tgccgacgag ggacagcgga
      661 agggccgtcg cgaactcgac cgacttcggt actttgaacg ccgcgaggcg ctccttgcag
      721 aacgcaatga tctcctcctg cgtcgcggtc ttcccattct tcaggacgac gaacgccttg
      781 accgactcgc cgcggtacgc gtccgggacg ccgatggccg cggcctcccc gacggccgaa
      841 tgcatgaaga ggacctcctc gacctcccga ggatacacgt tgtatccgga gcagaggatc
      901 atgtccttct tgcgatcgac gatgtagaag tagccgtcct catccatccg cgccaggtcg
      961 cccgtgacca accatccgtt gcggagcacc atcgccgtct cctccggctt gcgccagtac
     1021 cccttcatca cctgaggacc gcgcaccgcg agttcgccga cgtcgccttg cggaagttcc
     1081 cgtgacgggt catccgggtc gacgatcttc gcgtccgtgt cggggaacgg gatgccgatg
     1141 cactccttca cgacgccgtt catcggattg caatgggtga ccggcgatgc ctccgtcaag
     1201 ccgtatccct ccaccagtcg ccctcccgtc gccgcttcga actgcctgcg cacctcgttc
     1261 ggaagggggg cggccccgga gatgcaactg cggatcgagc ggaggtcgta cttcgcgagc
     1321 ttcgggtgcc gcaggatcgc gatgtacatc gtcgggacgc cagggaagag gctcggcttc
     1381 gtcttgttga tcaacttgag gatcgcgccg atctcccgcg ggttcggata caggacgacc
     1441 tcgatgccgc tgacgacgga gaagagcatc acggcggtca agccgtagac gtgaaacatc
     1501 ggaatggcgc cgagcagctt ctccggcccg tgggaacctg gggaaaacca cgccgcgacc
     1561 tgcatcgcgt tggcgatgag attgcggttc gtcagcatcg cccccttcga cgtgccggtc
     1621 gtgccgcccg tgtactggag caccgcaaca tcatcggggt ttgcgcgagc ctccgcaacc
     1681 ggactcgc
//
LOCUS       DATLMA010000144         1108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_797733, whole genome shotgun sequence.
ACCESSION   DATLMA010000144 DATLMA010000000
VERSION     DATLMA010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797733"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..>1108)
                     /locus_tag="VNA10_01800"
     CDS             complement(140..>1108)
                     /locus_tag="VNA10_01800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36445.1"
                     /translation="WKDMPTEDVKAVLDNLARSSVIVCSFEGGDPLVRDDIEELLKYQ
                     YQKPWYLLFTTSERDMQARYPMPEYGKYIDFLHISIDEGHKNLDMYDELEEYTKWGSI
                     VTVQIVVTKNDIGALETKIRRCQDAGVKAVVMCAVHLKNTKDHLPDLWSMSKVGLELK
                     KKYPGVIISPDSYFNRITWDHGCDTSSIIVDADGFLWYPCRVLEEKTINLIDSELMTY
                     LESPDGHERRLRMAACDIQCAWYQYYATQAFVNPREILSAWMPYYRDLLNGGKQPMAV
                     APAFAPKSIGDLAHMQILQESAIKGLDLAEPSAMELPMIQSPPGHT"
BASE COUNT          197 a          336 c          339 g          236 t
ORIGIN      
        1 gcagccgtcc taacggtaca tcccatcgcg cgtccaatgg cgcgtgccgc tatttctcag
       61 ttttctccaa acgggcgtcg tgtcgacaaa ccgaccaaac cggtcgattg gagaccttcg
      121 cggaccggac gggaccgact cacgtatggc cgggcggcga ttgaatcatc gggagttcca
      181 tcgccgatgg ctccgcgaga tccaaccctt tgatcgcgct ttcctggagg atctgcatgt
      241 gcgccaagtc cccgatcgat tttggcgcga aggccggggc gaccgccatc ggttgcttcc
      301 cgccattcag gaggtccctg taatagggca tccacgcgga gaggatctcg cgcggattca
      361 cgaacgcctg ggtcgcgtag tactggtacc acgcgcactg gatgtcgcac gcggccatcc
      421 ggagccgccg ctcgtggcca tcgggagact cgaggtacgt cattaattcc gagtcaatca
      481 ggttgatcgt cttctcctcg aggacgcggc atggatacca caggaagcca tccgcgtcga
      541 cgatgatcga cgaggtatcg catccgtggt cccaggtgat ccggttgaag tagctgtccg
      601 gcgagatgat gacgcccggg tacttctttt tcagttcgag gccgaccttg gacatcgacc
      661 agaggtccgg caggtggtcc ttcgtgttct tcaggtgcac ggcgcacatg acgaccgcct
      721 tgacgccggc gtcctgacac cggcggatct tcgtctcgag ggcgccgatg tcgttcttcg
      781 tgacgacgat ttggacggtg acgatggagc cccacttcgt gtactcctcg agctcgtcgt
      841 acatgtcgag gttcttgtgg ccctcgtcga tcgagatgtg cagaaagtcg atgtacttcc
      901 cgtactccgg catagggtag cgggcctgca tgtcccgctc cgacgtcgtg aacaggagat
      961 accacggctt ctggtactgg tacttcaata gctcctcgat gtcgtcgcgg acgagagggt
     1021 cgccgccctc gaaactgcag acgatcacgg aggagcgggc gaggttgtcg aggaccgcct
     1081 tcacgtcctc cgtcggcatg tccttcca
//
LOCUS       DATLMA010000145         2585 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_737639, whole genome shotgun sequence.
ACCESSION   DATLMA010000145 DATLMA010000000
VERSION     DATLMA010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737639"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="VNA10_01805"
     CDS             complement(<1..838)
                     /locus_tag="VNA10_01805"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006330.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HVG36446.1"
                     /translation="MSPEERLQTVLHGSEEVVTHDELRTLLDRPGTPRAYVGLEPSGL
                     MHIGTAFVIGSKVDDLVRAGFHTIIFLADWHAYINDKLGRDLENLRICADYFKDGFRA
                     VGVPDSVEYLYANEFVRHPEYWQTVIQASKASTVARIRRALTIMGRKEEEADLDASKL
                     IYPAMQVADIHWMNLDLALGGMDQRHAHMLYRDVAPKLGWKQVVALHTPLLPALDGGG
                     RMDLVAGKMSKSKPDSSVLLNDTAQDVERKINKAFCPAKETKGNPILEMARLILFPRQ
                     GKL"
     gene            913..1902
                     /locus_tag="VNA10_01810"
     CDS             913..1902
                     /locus_tag="VNA10_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018194581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HVG36447.1"
                     /translation="MGLSRGAGILPGGSGMWGLLGLLDLGSVTALQGTDLIGAAVGAF
                     VFVIIVLILLFASLKVVKEYERIVNFRLGKAQAEKGPGIVVVIPGIDKPVRVDLRERY
                     LQIPHQTCITKDNAPVDVDFFVYFKVASAADSVIRVNNFEGAAMGIATTTLRAVIGDI
                     ILDEVLSKREEINAILRTKLDEVTTRWGVKVTNVEIREILPPKNVTDAMILQMSAERS
                     RRAVVIEADGRKTATVTIAEGDKQSAVLRAEGARQAAILNAEGYAQALSTIFGAAKGV
                     DEKTLMLQYLDALKALGASPATKFILPLEFTELIRPFRGILSSAEGAARGDDK"
     gene            1892..2329
                     /locus_tag="VNA10_01815"
     CDS             1892..2329
                     /locus_tag="VNA10_01815"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HVG36448.1"
                     /translation="MTSKSPDVPVSTLIDRLFLYGIRSVLVVLAVVAFGIFLIVHGWI
                     VSRFDYLASGVLIVMIGVGLAFAFQQTTTKVITQRYFSGETLVGKTGRALVAMKSTGK
                     GVVHVEHESWSAVAEEDIARGEPVIVTAVESDNVTLKVRKHRT"
     gene            complement(2342..>2585)
                     /locus_tag="VNA10_01820"
     CDS             complement(2342..>2585)
                     /locus_tag="VNA10_01820"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HVG36449.1"
                     /translation="DSGRIVNMTGRASTDLVPGKDGVANVAAEDWTAVSDQFIPKGSV
                     VRVTAVADGKIQVTTATPEPEPSKSSGPSATPPASP"
BASE COUNT          460 a          805 c          849 g          471 t
ORIGIN      
        1 tgagcttccc ctgccgggga aacaggatga gccgagccat ttccaagatg ggattcccct
       61 ttgtctcctt cgcgggacag aacgccttgt tgatttttcg ttccacgtct tgggcggtgt
      121 cgttgaggag gacgctagag tcgggcttgg atttcgacat cttgcccgcg acgaggtcca
      181 tccggccgcc gccgtcgaga gcgggcagca acggcgtgtg caacgcgacg acctgcttcc
      241 acccgagctt cggcgccacg tcgcggtaca gcatgtgcgc gtgtcgttga tccatcccgc
      301 ccagggcgag gtccaggttc atccaatgga tgtccgcgac ctgcatcgcc gggtagatga
      361 gcttcgacgc gtcgaggtcc gcctcctcct ctttgcgtcc catgatcgtg agggctcgcc
      421 ggattcgcgc gaccgtcgag gctttcgagg cctggatcac ggtctgccag tattccgggt
      481 ggcggacgaa ctcgttcgcg tacaggtact cgactgagtc cgggacgccg accgcccgga
      541 agccgtcctt gaagtagtcc gcgcagatcc gaagattctc gaggtcccgt cccagtttgt
      601 cgttgatgta cgcatgccaa tccgccaaga agattatcgt atggaaaccc gctcggacca
      661 agtcgtcgac cttcgaaccg atgacgaacg ccgttccgat gtgcatcagc ccggacggct
      721 cgagtccgac gtaggcgcgc ggagtgcccg gccgatcgag gagcgtccgc agctcgtcgt
      781 gggtgacgac ttcctcggag ccgtgcagca cggtctggag ccgttcctcc ggggacaccc
      841 accaccgaac cggacgaaac aggataaagg tttcaatccc cgcctacgcc gggttgccgg
      901 gggagtccga gcatgggctt aagtcgggga gcgggcatcc tgcccggggg aagtggtatg
      961 tggggacttc ttgggctact cgacctcggt tcggtgaccg cgctccaggg caccgatctc
     1021 atcggcgcgg cggtgggcgc gttcgtcttc gtgatcatcg tcctgatctt gctgttcgcc
     1081 agcctgaagg tcgtcaagga gtacgagcga atcgtgaact tccgccttgg gaaggcccag
     1141 gctgagaagg gccccgggat cgtcgtcgtc attccgggaa tcgacaagcc ggtccgcgtg
     1201 gacctgcggg aacgatacct gcaaatcccg caccagacgt gcatcacgaa agacaacgcc
     1261 ccggtggacg tcgacttctt cgtgtacttc aaggtcgcga gcgccgccga ttcggtgatc
     1321 cgtgtgaaca acttcgaggg agccgcgatg gggatcgcca cgacgacgct ccgcgccgtg
     1381 atcggcgaca tcatcctcga cgaggtgctg tcgaagcgcg aggagatcaa cgcaatcctc
     1441 cggacgaagc tcgacgaggt cacgacccgc tggggcgtca aggtcacgaa tgtcgagatc
     1501 cgggagatcc tcccgccgaa gaacgtcacg gacgcgatga tcctccagat gtcggccgaa
     1561 cggagccggc gtgcggtcgt catcgaagcc gacgggcgga agaccgcgac ggtcaccatc
     1621 gcggaagggg acaagcagtc cgcggtcctc cgcgcggaag gcgcacgaca agccgcgatc
     1681 ttgaacgccg aaggctacgc gcaagccctc tccacgatct tcggagccgc gaagggggtc
     1741 gacgagaaga ccctcatgct ccagtacctc gacgctctaa aagcgctcgg cgccagcccg
     1801 gccacgaagt tcatcctccc gctcgaattt accgagctca tccggccgtt ccggggtata
     1861 ctgtcctcgg cggagggagc cgcgagaggg gatgacaagt aagagtccgg acgtgcccgt
     1921 atcgactctg atcgatcggc tcttcctgta cggcatccgc tcggtcctcg tggtgctggc
     1981 ggtcgtcgcg ttcggcatct tcctgatcgt ccacggatgg atcgtgagcc ggttcgacta
     2041 cctcgcctcg ggcgtcttga tcgtcatgat tggggtcgga ctggcgttcg cctttcagca
     2101 gacgacgacg aaggtcatca cccagcgcta tttctccggg gagacgctcg tcggcaagac
     2161 cggccgcgcg ctcgtggcga tgaaatccac cggcaaaggg gtcgtacacg tcgagcacga
     2221 atcgtggagc gcggtcgcgg aggaagacat cgcccgcggg gagccggtca tcgtgaccgc
     2281 cgtggaatcg gacaacgtga cgctcaaggt ccgcaagcac cggacgtaag cggcggatcg
     2341 actacggcga ggcggggggc gtcgcggaag gcccgctgga tttcgaaggt tccggttcgg
     2401 gtgtggcggt tgtcacctgg attttcccgt ctgcgacggc ggtcacgcgg acgaccgatc
     2461 ccttcgggat gaattgatcc gacacggcgg tccagtcctc cgccgcgacg ttggcgacac
     2521 cgtccttgcc ggggaccagg tccgtcgacg ctcggcccgt catgttgacg atgcggccgg
     2581 aatcg
//
LOCUS       DATLMA010000146         1379 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_14696, whole genome shotgun sequence.
ACCESSION   DATLMA010000146 DATLMA010000000
VERSION     DATLMA010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14696"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VNA10_01825"
     CDS             <1..260
                     /locus_tag="VNA10_01825"
                     /inference="COORDINATES: protein motif:HMM:NF013366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36450.1"
                     /translation="FCESHMQSTLTEEEETLEPSTDCATCKKFMDQYKVESVKAGNDP
                     TRIVLEFETDGSLSAKAVLLASLDILAKRFTELATQATAIA"
     gene            328..708
                     /locus_tag="VNA10_01830"
     CDS             328..708
                     /locus_tag="VNA10_01830"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HVG36451.1"
                     /translation="MELGELELAVLRAVRNLGSASSGAIYEEVRKSRDVAYTSVTTTL
                     YRLVDKDLIAMRKASQKKVSYRLKEGRAYRKTMASMVDRVVNTFGGAAVSYLLTNTGS
                     LPAGELSSLQTQVEKRRSKEKRDG"
     gene            701..>1379
                     /locus_tag="VNA10_01835"
     CDS             701..>1379
                     /locus_tag="VNA10_01835"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HVG36452.1"
                     /translation="MASLLETIGEALQHYWSSPLSLTVLAVCAASIGTLLYVFITNAR
                     NAKLRVSLLTGLYALSIFFWAFIATSLVLCLSQARMVAYARNGVPVAVFGAVVGGLLA
                     STVISLLVWRFGNAAVIRRFAPRDLRADEAWLQRHVTLLAEFEDVPRIRVRIVESDDA
                     IAMAVGGKERNILVSSGLIALLERDEIETVVAHELMHLKHHDAEFKVFSRVLSRILFF
                     DPFSKFFD"
BASE COUNT          259 a          411 c          429 g          280 t
ORIGIN      
        1 cgttctgcga gagccacatg cagtccacgt tgacggagga ggaagagacg ctcgagccct
       61 cgacggactg cgcgacctgc aagaagttca tggatcagta caaggtcgag tccgtgaagg
      121 cggggaacga tcccacgcgg atcgtcctgg agtttgagac ggacggatcg ctgagtgcga
      181 aggcggtgct cctcgcatcg ctcgacattc tggcgaagcg gttcaccgag cttgcgacac
      241 aggcgacggc catcgcgtga agagacacgt ccacgatgaa gcacgctgga caagttttaa
      301 ctagattact atccatgtag tagtccgatg gaacttggcg agcttgaatt agcggtccta
      361 cgggccgttc gcaacctggg ctccgcgagt tcgggcgcga tttacgaaga ggtccgaaag
      421 tcccgggacg ttgcgtatac gagcgtcacg acgaccctgt atcggctcgt cgacaaggac
      481 ctcatcgcga tgcggaaggc aagccagaag aaggtctcct atcgcttaaa ggaaggccgc
      541 gcctaccgga agacgatggc ctcgatggtg gaccgcgtcg tgaacacgtt cggaggggcg
      601 gcggtctcgt acctcctaac caacacaggt tcgttacccg caggggagtt gtcttcgctc
      661 cagacacagg tcgagaagcg gcggtccaag gagaagcggg atggctagcc tgctcgagac
      721 catcggcgaa gctttgcaac attactggtc ctcccctctc tccctgacgg tcctcgcggt
      781 gtgcgcggca tcgattggca cgctgctgta tgtcttcatc acaaacgcgc gcaatgcgaa
      841 gctccgcgtg agcttgctca ccggactcta cgccctctcg atcttcttct gggcgttcat
      901 cgcgacgagc ctcgtccttt gcttgtcaca ggcccgcatg gtggcgtatg cccgcaatgg
      961 cgttccggtc gccgtgttcg gggccgtcgt cggcgggctc ctcgcatcca cggtcatctc
     1021 gctcctcgtg tggcggttcg ggaacgcggc cgtgatccgc cggttcgccc cgcgggacct
     1081 ccgcgcggat gaggcgtggc tccaacggca tgtgaccctt ctcgctgagt tcgaggacgt
     1141 gccgcgcatt cgggtgcgaa tcgtcgaatc ggacgacgcg atcgcgatgg ccgttggcgg
     1201 taaggaacgg aacatcctgg tctccagtgg tctcatagcc ctcctcgagc gggatgagat
     1261 cgagaccgtc gtcgcgcacg agctgatgca tctgaaacac catgatgccg agttcaaggt
     1321 tttctcgcgg gtcctatccc gaatcctctt cttcgatccg ttcagcaagt tcttcgatc
//
LOCUS       DATLMA010000147         2603 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_14720, whole genome shotgun sequence.
ACCESSION   DATLMA010000147 DATLMA010000000
VERSION     DATLMA010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14720"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1849)
                     /gene="thsB"
                     /locus_tag="VNA10_01840"
     CDS             complement(203..1849)
                     /gene="thsB"
                     /locus_tag="VNA10_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014586781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HVG36453.1"
                     /translation="MPAGTPILVLKEGTRRERGKGAQFNNIAAAKAVADAVRSTLGPR
                     GMDKMLVDSLGDVVITNDGVTILKEIDIEHPAAKMLVEVAKTQDEEAGDGTTTAVIFA
                     GELLKKAEDLIDQNIHPTVIAAGYRQASDKAHEVLEKVASKISIKEVDTLKKVGMTSM
                     SSKSASGHKELLADIAVKAVTTVAEQRADGSYFVDDDNIQIVKKQGGSIADTTLVDGI
                     IVDKERVHPGMPSEVKDAKIALVDAALEVKKTEIDAKIEITDPTQLQAFLNEEEAMLK
                     RMVEVVRKSGATVIFCQKGIDDLAQHYLAKQEIYAVRRVKKSDMEKLAKATGGKVVTK
                     LDELSKDDLGFAKQVYEKKIGDDQMTFVTGCKNPKAVSILLRGGTEHVVDELERSLED
                     ATSVVAVAIEDGKVITGGGSSAMEIALALRDFASTVGGREQIAIEAFADAVEVIPRTL
                     AENAGLDPIDILIELRQQHKKGNKSAGINVFSGKVSDMKKENVIEPIRVGSQAISSAT
                     DAAVMVLRIDDVIAARSGGGGAPGGGKGGEGGDGGDGEEF"
     gene            complement(1932..2177)
                     /locus_tag="VNA10_01845"
     CDS             complement(1932..2177)
                     /locus_tag="VNA10_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36454.1"
                     /translation="MVVVVLSVAWCGLLAVGLAVDYVEYCTGYPIVECGPISASALGK
                     LVLGWSLLGLIPGVLLIALVYYREQKRHQSRAYPKIA"
     gene            2300..>2603
                     /locus_tag="VNA10_01850"
     CDS             2300..>2603
                     /locus_tag="VNA10_01850"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HVG36455.1"
                     /translation="MKELLLELAEAVQHAVAELVEDPSEVVGRGADGAPSARIDRVAE
                     AAVLRVLDYEDARVNVLSEEAGFIDRGGDRTIVLDPIDGTHNALRGVPAYSVSMAIG"
BASE COUNT          423 a          857 c          799 g          524 t
ORIGIN      
        1 tgggctcccg agtcagatgg ctctcgtcgg cgacgggtga aggaggcccc aacgcggccg
       61 ggcttgtcgc tcccgccgcg gggagactcc gatgagcacc gaggcgcccg acgatgcggt
      121 cgatggcgtc gggggaggga cgctccccct cgccagacgg ttccgagacc atggggacca
      181 ccgaggcccc gcaaggggcc cctcagaact cttcgccgtc gcccccgtcg ccgccctcgc
      241 cgcccttgcc gccgcccggg gctccgccgc cgccggacct ggctgcgatg acgtcgtcaa
      301 tccgaagcac catgaccgcg gcgtccgtcg ccgaggagat tgcctgactc ccgacccgga
      361 tcggctcgat cacgttctct ttcttcatat cggagacctt gccgctgaag acgttgattc
      421 ccgcggactt gttccccttc ttgtgttgct ggcgcagctc gatcaggatg tcgatcgggt
      481 ccaggcccgc gttctctgcg agggtgcgcg gaatgacctc gacggcgtcc gcaaacgcct
      541 cgatggcgat ttgctcgcgc ccgccaacgg tcgacgcgaa gtcgcgcagg gccagggcga
      601 tctccatcgc actcgaaccg ccgcccgtga taaccttgcc gtcctcgatc gcgaccgcga
      661 cgacgctcgt cgcgtcctcg agggaccgct cgagctcgtc gacgacatgc tcggtgcctc
      721 cgcgcaggag gatcgagacc gccttcgggt tcttgcatcc cgtgacgaac gtcatctggt
      781 catcgccgat cttcttctcg tagacctgct tggcgaagcc gaggtcgtcc ttcgagagct
      841 cgtcgagctt cgtcacgacc ttgccgccgg tggccttcgc gagcttctcc atgtccgact
      901 tcttgacccg gcgtaccgcg tagatctcct gcttcgcgag gtagtgctgc gcgagatcgt
      961 cgatgccctt ctggcagaag atcacggtcg cgccgctctt cctcacgacc tcgaccatgc
     1021 gcttcaacat cgcctcttcc tcgttgagga aggcttggag ttgggtcggg tccgtaatct
     1081 cgatcttcgc gtcgatctcg gtcttcttga cctcgagggc cgcatcgacg agggcgatct
     1141 tcgcgtcctt cacttcgctg ggcatcccgg ggtgcacgcg ttccttgtcg acgatgatgc
     1201 cgtcgacgag tgtcgtgtcc gcgatcgaac cgccctgctt cttcacgatc tggatgttgt
     1261 catcgtcgac gaagtacgat ccgtcggctc gctgttccgc gaccgtcgtc accgccttca
     1321 cggcgatgtc cgccaagagc tccttgtggc cgcttgcgga cttggacgac atcgaggtca
     1381 tcccgacctt cttcagggtg tcgacttcct tgatcgaaat cttcgacgcg accttctcga
     1441 gaacctcgtg ggccttgtcc gaggcctggc gatacccggc cgcaatcacg gtcgggtgaa
     1501 tgttctggtc gatgaggtcc tccgctttct taagtagctc ccccgcgaag atcacggcgg
     1561 tcgtggtgcc gtccccggcc tcctcgtcct gggtcttcgc gacctcgacg agcatcttcg
     1621 ccgcggggtg ttcgatgtca atctccttaa ggatcgtgac gccatcgttc gtgatgacga
     1681 cgtccccgag gctgtccacg agcatcttat ccattccgcg ggggcccaag gtcgagcgaa
     1741 ccgcatccgc aaccgccttc gcggccgcga tgttgttgaa ctgcgctccc ttgccgcgct
     1801 cgcggcgcgt cccttccttc aggaccagaa tcggcgtacc tgctggcatc atgtaagttc
     1861 ctccgaatat tggattcgga cgcttcgcta taggtgtact tctatataag cgtaccgacg
     1921 attgactggg ctcaagcaat cttcggatag gcccgtgact ggtgtctttt ctgttcgcgg
     1981 tagtacacga gtgcgatcag aagaacaccg gggatcaggc ctaaaagcga ccatccaagg
     2041 accagctttc cgagggccga ggcggaaatc gggccgcact cgacgatggg gtatccggtg
     2101 caatactcca cgtaatcgac cgctaaaccg accgcgagca ggccacacca tgcgacgctg
     2161 agaaccacga ccaccaagac ggtttcgtcc cgccatccgc ggaatgcaga cggcggttgg
     2221 acacgaggag agcccgtcaa ttagaggtcc gcggagtaaa gggagttaat tctatatcaa
     2281 gaaaggcggt aggtcggccg tgaaggagct tctcctcgag ctcgcggagg ccgtccagca
     2341 cgcggtcgcg gaactcgtcg aggaccccag tgaggtcgtg ggccgcggcg ctgacggcgc
     2401 acccagcgcg cggatcgacc gggtggcgga ggccgccgtc cttcgggtcc tcgattacga
     2461 agacgcccgg gtgaacgtcc tgagcgaaga ggcggggttc atcgatcggg gaggcgaccg
     2521 gaccatcgtc ctcgatccga tcgacgggac ccataacgcg ctccgaggtg tgccggcgta
     2581 ttcggtgtcg atggcaatcg gcc
//
LOCUS       DATLMA010000148         1007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_559006, whole genome shotgun sequence.
ACCESSION   DATLMA010000148 DATLMA010000000
VERSION     DATLMA010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559006"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VNA10_01855"
     CDS             complement(<1..496)
                     /locus_tag="VNA10_01855"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG36456.1"
                     /translation="MRSRIFAFLAVLLLTLASCGGAVSVSPSPSVTASPFPATLSDFQ
                     NRSVTVPARPERLVSIGPSITAFLFALGAGSRVVGVDDFSDEPAEAATREHVGGIKVN
                     FEKVVALKPDLVFSVKFSDGTIEKLQAASLNVLVVDPQSVSDVAKTATLLGKAVGADG
                     EALAR"
     regulatory      complement(497..637)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01482"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="The adenosylcobalamin (AdoCbl) riboswitch is found
                     in the 5'-untranslated regions of vitamin B12 (Cobalamin)
                     related genes in bacteria; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF01482"
     gene            complement(650..913)
                     /locus_tag="VNA10_01860"
     CDS             complement(650..913)
                     /locus_tag="VNA10_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012188314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36457.1"
                     /translation="MYSSLISKIEKAKRYAEEPERISFRSFEVAFRGENGTHAVSLRG
                     DDWNCECEHFHTSGLCAHVMTLQRVFASNLSDNARFTQEHVPA"
BASE COUNT          184 a          306 c          329 g          188 t
ORIGIN      
        1 agcgcgcgag ggcttcgccg tccgcgccga ccgcttttcc gagcagcgtc gcggtcttcg
       61 cgacgtcgga aacgctctgc ggatcgacga cgagcacgtt gagtgatgca gcctggagct
      121 tttcgatcgt gccatctgag aacttcacgc tgaagaccag gtccggcttc agcgcgacga
      181 ccttctcgaa gttcaccttg atgccgccga cgtgctctcg cgtcgcggcc tcggcgggct
      241 catcggagaa atcgtcgacc cccacgacgc gcgagcccgc gccgagagcg aagagaaatg
      301 ccgtgatcga ggggccgatg gacacaaggc gctctggccg ggcaggaacc gtgaccgatc
      361 ggttctggaa atcgctcagc gtcgccggga atggtgatgc ggtgacggaa ggtgaaggac
      421 tgacggagac ggcaccaccg caggaggcga gcgtgagaag caggaccgcg aggaacgcga
      481 agattcgtga gcgcatctgg cgcacccctt tcttgcgaag gcgtgtatgc cgcgagcgga
      541 tgtcccaggc gacccgagtt gaggcgtttg cctttcacgg tggcgcgacc ctgccggaat
      601 ctcaccggct tcgctggaac cccgcgtatg aagtttttcg cgagggctct tacgccggca
      661 cgtgctcctg tgtgaaccgc gcgttgtcgg agaggttcga cgcgaagact cgctggagtg
      721 tcatgacgtg cgcgcaaagg ccgctcgtat ggaagtgctc gcactcgcag ttccagtcat
      781 cgcccctgag ggagacggcg tgcgtgccgt tttcaccgcg gaacgcgacc tcgaagctcc
      841 ggaaactgat gcgttcgggc tcttcggcgt agcgcttcgc cttctcgatc ttggagatga
      901 ggctcgagta catgatctcc tccacactcc ttattcaatt cgccctcgcc ggacgtgccg
      961 agtttagacc ccgcaccgta tccttcgaaa cgggagtgaa aatgcgg
//
LOCUS       DATLMA010000149         1146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_857570, whole genome shotgun sequence.
ACCESSION   DATLMA010000149 DATLMA010000000
VERSION     DATLMA010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857570"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..315
                     /locus_tag="VNA10_01865"
     CDS             121..315
                     /locus_tag="VNA10_01865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36458.1"
                     /translation="MDPIAIATVSLFVSSLAGFALGRHHGVRSGVPRLDWICLACGQR
                     NEFELDRCWSCELESAALVS"
     gene            complement(329..>1146)
                     /locus_tag="VNA10_01870"
     CDS             complement(329..>1146)
                     /locus_tag="VNA10_01870"
                     /inference="COORDINATES: protein motif:HMM:NF013885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36459.1"
                     /translation="EISQVALVLGMTFSLTEVSIAGISPRTELRRFLIAFAMSYVVLS
                     GLILTFAILSPDPQIRNGWVLMAAVPPAIAVVPITSILKGDTRRSVISLAVLYLLGLG
                     LVPAITLIFTSEAAPFGELVVQTVLLIGVPLVASRLLRRWPRVAEFRGSAVSVSFFFL
                     VVAIAGSTRAPLLAHPEFIESLALLSFVRTFLLGGVVFVLTRALHVPWAERVAVTAFS
                     SFKNLGLTVVLAFAVFGSVATLPSIVSLIFEILWLAALPVLFRTDMRKAAAAA"
BASE COUNT          244 a          349 c          386 g          167 t
ORIGIN      
        1 gggtcccgcg tgatcggaca ttagtctcta gcgatcccgc ggagggcgcg caagagtttc
       61 aattcggata ggcagccagg aacgttctta gtccggaccg ggaacgacgc gacgtcctcc
      121 atggatccaa tcgccatcgc aaccgtctcc ctgttcgttt cctcgttggc ggggttcgcg
      181 ctgggacgac accatggggt ccggtccggg gttccgcgct tggactggat ctgcctcgcc
      241 tgcgggcaac ggaacgaatt cgagctcgac cgatgttgga gttgcgagct cgagtccgcc
      301 gcgctggtct cgtaatcggt gtgcatcgtt acgctgcggc cgcggccttc ctcatgtccg
      361 tccgaaaaag cacgggcagg gccgcgagcc acagaatctc gaagatcaag gatacgattg
      421 acggcaacgt cgcgaccgac ccgaacaccg cgaaggccaa gacgaccgtc aggccgagat
      481 tcttgaacga ggagaaggcc gtgaccgcca cccgctccgc ccatgggaca tggagggccc
      541 gcgtaaggac gaacacgact ccgcccaaca ggaacgtccg cacgaacgaa aggagagcga
      601 gggattcgat gaactccgga tgggcgagca ggggagctcg tgtcgagccg gcgatcgcca
      661 cgacgaggaa gaagaacgag acgctcaccg cgctcccgcg aaactccgcg acgcgaggcc
      721 accggcggag gaggcgtgag gcgacgagcg gcaccccgat caacaggacc gtttggacga
      781 cgagttcccc gaaaggcgcc gcctcactcg tgaagatcag cgtgatcgcg ggaacgagcc
      841 cgaggccgag cagatacagg acggccaacg agatgacgga ccgtcgcgtg tctcccttga
      901 ggatcgaggt gatcggtacg accgcgatcg cgggaggaac cgccgccatg aggacccagc
      961 cgttccggat ctgagggtcc gggctgagga tggcgaaggt caggatgagc ccgctcagga
     1021 cgacgtaact catcgcgaac gcgatcagga accgtcggag ctctgtccga ggcgagatgc
     1081 cggcgatcga gacctcggtg agcgagaacg tcatcccgag gacgagcgcg acttgcgata
     1141 tctcct
//
LOCUS       DATLMA010000150         3759 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_677067, whole genome shotgun sequence.
ACCESSION   DATLMA010000150 DATLMA010000000
VERSION     DATLMA010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3759
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_677067"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1082
                     /gene="purF"
                     /locus_tag="VNA10_01875"
     CDS             <1..1082
                     /gene="purF"
                     /locus_tag="VNA10_01875"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR01134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HVG36460.1"
                     /translation="FMTTSDSEVIVRLLANEIVNSGGDVKRALKEFTARLVGAYSLAL
                     MINDTVYAVRDPLAIRPLCIGEGNGRFMIASESVVFDTLGFKFIRDLKPGEIVELRPD
                     GFDSMRLPHPNHTAHCMFEWVYFARPDSVLDDRLVYDARVKIGEQLAKEYPVEADIIV
                     PVPESGRAQAQGYAQVAGLPVVEGLIKNRYIERTFIMPDQGERELGVMLKLNPIRSAV
                     KNKRIVLIDDSIVRGTTIRKIVQILRQAGAKEVHVRIGCLPIRFPCYLGIDMKTRDQF
                     IANEKTVPEIADFINADSLGYLSMKGLITALKHSRDDICLGCLTGEYPVPIPGEKMRK
                     EKPLELFSEPVANKAPAKRGAKAAT"
     gene            complement(1133..2731)
                     /gene="aceB"
                     /locus_tag="VNA10_01880"
     CDS             complement(1133..2731)
                     /gene="aceB"
                     /locus_tag="VNA10_01880"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HVG36461.1"
                     /translation="MITAKKRVEVSPAAEGASTEILTAEALEFLADLHRRFNPTRLDL
                     LRRRAERQARVDRGGVLDFSKQTRRIREDSWSIAPVPVDLMDRRVEITGPTDRKMMIN
                     ALNSGAKMFMADFEDANTPAWRNVVEGQRNLRDAVRHTIGYKSPEGKEYRLNTEVATL
                     LVRPRGWHLSERHIQVDREPASASLVDFGLFIFHNAKELVARGTGPYFYLPKMESHLE
                     ARLWNDVFAFAEDAVGIRRGTIKGTALIETFPAAFEMEEILYELRDHAAGLNAGRWDY
                     FFSIIKTLRARRDFVLPDRAQLTMTVPFMRAYAELLVKTCHRRGAHAIGGMAAFVPSR
                     KDPQANEVAFAKVREDKAREADDGFDGTWVAHPDLVPVAREIFDRALQGRSNQLARLR
                     EDVAVSAHDLLDVQVPGGKTTEAGLRSNVRVAIQYLEAWLRGTGAVTISNLMEDTATA
                     EIARSQVWQWVHHGARLEDERTVHEGLVRQIGDEELDRLRMEAKPAAQKRGRFREARK
                     LFDAIALKEPLVDFLTIPAYALIE"
     gene            2972..3044
                     /locus_tag="VNA10_01885"
     tRNA            2972..3044
                     /locus_tag="VNA10_01885"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3005..3007,aa:Ala,seq:ggc)
     gene            3117..>3759
                     /locus_tag="VNA10_01890"
     CDS             3117..>3759
                     /locus_tag="VNA10_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010584762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36462.1"
                     /translation="MASVKREITKPKSAVIRWLLDSDPSIRWQVMRDLTDESDEAVAA
                     VRSRVAIEGWGARLLSLQARDGNWGGGAWVYQSWASTMETLVLLRELGLDPASEQARN
                     AIGLVRDKSTWGPHHNDSPFFEGEVEPCINGRVLACGAYFGGASDRLVDRLLREQLDD
                     GGWNCDAPPSKRSSFNSTICVLEGLLEYEKAKGSISTVRDARFRGQEYLLKRRL"
BASE COUNT          688 a         1189 c         1182 g          700 t
ORIGIN      
        1 ccttcatgac gacatccgac agcgaggtca tcgtccgact tctcgccaat gaaatcgtga
       61 actctggtgg agacgtcaag cgagccttga aagaattcac cgcacggctc gtcggggcgt
      121 acagcctcgc gctgatgatc aacgacaccg tctacgcggt tcgcgatccg ttggccatcc
      181 ggcccctctg catcggggaa ggcaacggac gattcatgat cgcgtcggag agcgtcgtgt
      241 tcgacacgct ggggttcaag ttcatccgcg acctgaagcc gggggaaatc gtcgagctcc
      301 ggccggacgg cttcgattcg atgcggctcc cccatccgaa ccacaccgcg cactgcatgt
      361 tcgagtgggt gtatttcgcg cgcccggaca gcgtcctgga cgaccgtctc gtctatgacg
      421 cccgcgtgaa aatcggtgag caacttgcga aggagtatcc ggtcgaggcg gacatcatcg
      481 tgcccgtccc ggaatccgga cgggcgcagg cccaagggta cgcgcaagtc gccggcctcc
      541 cggtcgtcga ggggctcatc aagaaccggt acatcgagcg gaccttcatc atgcccgatc
      601 agggggagcg cgagctcggc gtcatgctca agttgaatcc catccggtct gcggtgaaga
      661 acaagcggat cgtcctgatc gacgactcca tcgtccgcgg gacgacgatc cgaaaaatcg
      721 tgcagatcct ccgacaggcc ggcgcgaagg aagtccacgt tcgcatcggc tgcctgccca
      781 tccggttccc gtgctatctc ggtatcgaca tgaagacgcg agaccagttc atcgcgaacg
      841 agaagacggt gccggagatt gcggacttca tcaatgcgga ttctctcgga tatctctcca
      901 tgaaggggct gatcacggcg ctgaagcatt cccgggacga catctgtctc gggtgcctga
      961 cgggggaata cccggtcccg atccccggcg agaagatgag gaaagagaaa cccctcgagc
     1021 tgttctccga accggttgcg aacaaggcgc ccgcgaagcg tggcgccaag gccgcaacct
     1081 aggtccggct cggacgcgag acgcccggtc gcaccatccc gatccggatc aatcattcga
     1141 tgagcgcata cgccgggatc gttaggaagt ccaccaacgg ctccttcagc gcgatcgcgt
     1201 cgaacagttt tcgcgcttct cggaatcgcc cacgcttctg agccgcgggc ttcgcctcca
     1261 tccggagccg gtcgagctcc tcgtcgccga tttgccgcac gagtccctcg tggacggtcc
     1321 gctcgtcctc caggcgagcg ccgtgatgga cccattgcca gacctgcgag cgcgcgatct
     1381 cggcggtcgc ggtgtcctcc atgaggttcg agatcgtcac ggcccccgtt ccccggagcc
     1441 atgcctcgag gtactggatc gcgacccgga cattgcttcg caagcccgcc tcggtggtct
     1501 tgccgcccgg aacctggaca tccaagaggt cgtgcgccga cacggccaca tcctcacgca
     1561 ggcgggcgag ttggttcgat cgtccctgga gcgcgcggtc aaaaatctcc cgggcgaccg
     1621 ggacgaggtc gggatgggcg acccacgtgc cgtcgaagcc gtcgtccgcc tcgcgcgcct
     1681 tgtcttcccg caccttcgca aacgcgacct cattcgcttg aggatctttg cggctcggga
     1741 caaacgcggc catcccgccg atcgcgtgcg ccccgcggcg atggcacgtc ttcacgagga
     1801 gctccgcata cgcgcgcatg aacggcaccg tcatcgtgag ctgggctcgg tccggcaaca
     1861 cgaagtccct gcgggctcgc agtgtcttga tgatgctgaa gaaatagtcc catcggcccg
     1921 cgttcaggcc cgcggcatgg tcccgtaact cgtagaggat ctcctccatc tcgaacgcgg
     1981 ccgggaaggt ctcgatcagt gccgtcccct tgatcgtccc gcgccggatg cccaccgcat
     2041 cttctgcgaa tgcgaagacg tcgttccaca gccgtgcctc gagatggctt tccatcttgg
     2101 ggaggtagaa atacggtcct gtcccccggg cgacgagttc ctttgcatta tggaagatga
     2161 acaggccgaa gtcgacgagg ctcgcggagg cgggctcgcg gtcgacctgg atatgccgtt
     2221 cagagagatg ccatccgcgc ggccggacga ggagcgtcgc gacctcggtg ttcaaccggt
     2281 attccttgcc ttccggactc ttgtacccga tggtgtgccg caccgcatcg cggaggttcc
     2341 gctggccctc aaccacgttc cgccaggccg gtgtgttcgc atcctcgaag tcggccatga
     2401 acatctttgc gcccgagttc agcgcattga tcatcatctt ccggtccgtc gggccggtga
     2461 tttcaacgcg ccggtccatc aaatcgactg gcacgggagc gatgctccaa gagtcttccc
     2521 ggatccgccg ggtttgcttc gagaagtcga ggacccctcc gcgatccacc cgcgcctggc
     2581 gctctgcccg ccgccgcagg aggtccaggc gcgttggatt gaatcgccga tggaggtcgg
     2641 cgaggaattc aagcgcttct gctgtgagga tctcggtgct cgcgccttcc gcagcggggc
     2701 taacctccac ccgtttcttt gccgtgatca tccaatcgcg ggagacttga agatgatttc
     2761 gttgcgacga catgcgctcg agggtcgtgc gatgaccgag cgagcgtggt atctgatatc
     2821 ggaattcaac cctgaagcaa tccgatttgc gtgccgaccg agggttcgcc ccgtcgcacc
     2881 actcgggacg agcggtctcc tcatacggaa aacgatcgcg ccacgaaggc caaagaaacc
     2941 ttaatagcgg gcctcggtta cagcgcgccg cgggccggta gatcagctgg aagatcgcta
     3001 tcttggcatg gtagaggccg tgggttcaaa tcccacccgg tccacttttc catggagcgg
     3061 agcatctttg agaccgccaa gaccgtctcc cggcgatagc gaagaggagc cagcgggtgg
     3121 catcagtcaa acgtgagatc acgaagccga agagcgcggt catacgttgg ctgcttgact
     3181 cggacccttc gatccgctgg caggtgatgc gcgacctcac ggacgaatcc gacgaggccg
     3241 tcgccgccgt gcggtcgcgt gtcgccatcg agggctgggg cgcacggctt ctcagcctcc
     3301 aggcacgtga tggaaattgg ggcggtggcg cttgggtgta ccaaagctgg gcctccacca
     3361 tggagacttt ggtgctgttg agggagttgg ggctggaccc ggccagtgag caagcgcgga
     3421 atgcgatagg cctggtccgg gacaagagca cctggggccc tcatcacaac gattcgccct
     3481 tcttcgaggg cgaggtggaa ccctgcatca acgggagagt tctcgcctgt ggcgcgtact
     3541 tcggcggggc aagcgaccgg ctggtcgacc ggctcctccg tgagcagctg gatgacggcg
     3601 gctggaactg cgacgctccg ccgagcaagc ggtcctcgtt caattccacg atctgcgtgc
     3661 tcgaagggct gttggagtat gagaaggcaa agggcagcat atctaccgta cgggatgctc
     3721 gctttcgggg ccaggagtac ctgctgaaac gccgcttgt
//
LOCUS       DATLMA010000151         3141 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_15049, whole genome shotgun sequence.
ACCESSION   DATLMA010000151 DATLMA010000000
VERSION     DATLMA010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15049"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1081
                     /locus_tag="VNA10_01895"
     CDS             <1..1081
                     /locus_tag="VNA10_01895"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HVG36463.1"
                     /translation="LVTQGSGPYSVNESLAENLTAQSWARVVSPEILSLGTVLGEPVV
                     VRAADPAAFFSLEGGTWVQGATVGDRTAVAGEGLVRRLGLAVGDDVTVVGSSVPRIAF
                     LRIAGIYRTATSANDELLVGFAMGRLLSGLGATGFHSIRIRTTDPTALLTFLRGFGAS
                     VHVTGPDLPRVDVASDPPTDERISNLILRTGIGGTPRDYLASAVAEATNSVGVVAYGI
                     AALLGILVAFGIHAVQARAFADRVPAVGVLRAIGAGNRWMRRRLLAESLPLAAGAAIL
                     GAGLGFLAETSLQPNASLVIFGHEVLVSFDLATFALVVLAVVAISMFSGLLLLRRAMA
                     ARPVESIRETPAVASPQSLEAILRG"
     gene            1117..2712
                     /locus_tag="VNA10_01900"
     CDS             1117..2712
                     /locus_tag="VNA10_01900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36464.1"
                     /translation="MAFATRLVPLLFSPLPFGIDGFALARISSDIGGSGAWRIDSSNV
                     NSYNQKLPGFSFLWSAVASLGGLSPLAHVQLVMPLLAALAVIPAYLFGVKATGRRLGG
                     VVAGLFITFFGSFLLLTSSVSKESIGLVIFPVAVLMFLERRDPRKRVLSVVLVVFLGF
                     LHPLTTLLVLGMISAQVVLDQRRAISRGRFRVGSFSLDVATGPLLAILPWAYYSSVNL
                     PFLGDLLAADALVLFLGIVILMTALIAPMGRPANLRMGQRLVSPLPRGILVPAIGVLV
                     VLGNARNGLFAGAIGTQSGLLQMLPAIGVLAAFALAGYQLVRRTTNRANDLVVSMLVA
                     PVALILFGLLRGLDPESLLIVYRSVDFLDYAFAVLIGVAFVAAWRWLGPWRPAKAVLL
                     AGFLAALLATTPMAWNTPAVFGVNNVTTPQEFRALALLASFGARNVTTDQRLADVGAM
                     WFGYSMDSSLPVKLRDNESVARFQYALVLERWTTVGAQLHPAPNVVISTTALENFLTA
                     NRIVYAAGPSGDRIFIVQLAQAT"
     gene            2816..>3141
                     /locus_tag="VNA10_01905"
     CDS             2816..>3141
                     /locus_tag="VNA10_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3ae"
                     /protein_id="HVG36465.1"
                     /translation="MAEKKSRAAARKIKDKWKAKVWYNLLAPEMFNKQLLGETPTDTP
                     DKLVGRVTEVTVQDLTGDFSKMHIKLQFRVSAVQGQDALTQFIGHDMTSDYIRRLTRR
                     KRTRTDL"
BASE COUNT          436 a         1053 c         1011 g          641 t
ORIGIN      
        1 tctcgtgacg cagggaagcg ggccgtactc agtcaacgag agcctcgcgg agaatctcac
       61 cgcacaatca tgggcgcgtg tcgtgagccc ggagattctg agcctcggga cggtgctcgg
      121 ggagccggtc gtcgttcggg ccgcggaccc cgccgcgttc ttctcccttg agggcggtac
      181 gtgggtccag ggcgcgacgg tgggcgaccg gacggcggtc gccggagaag gcctcgtgcg
      241 tcgactcggg ctcgcggtcg gggacgacgt gacggtggtc ggttcctcgg ttccgcgcat
      301 cgcgttcctc cggattgcgg ggatctaccg caccgctacg tcggcgaatg atgagctgct
      361 ggtcggcttc gcgatgggcc gattgctctc cggcctgggt gcgaccgggt ttcattccat
      421 ccggatccgg acgaccgatc caaccgcgct cctcacgttc ctccggggat tcggggcgag
      481 cgtgcacgtg accggaccgg acttgccgcg agtggacgtc gcgagcgatc cgccgaccga
      541 cgagcggatt tcgaatctca ttctccggac cgggatcggc gggacgcccc gagactatct
      601 cgcgtccgcg gtggccgagg cgacgaattc cgtcggggtc gttgcatacg ggattgccgc
      661 gctcctcggg attctcgtcg cgttcggaat ccacgccgtt caagcacgcg cctttgcgga
      721 tcgggttccc gccgtcggtg tgctccgggc gatcggtgcg ggcaaccgct ggatgcggcg
      781 tcgccttctc gcggagtcgc ttccgctggc cgcgggcgcc gcgatcctcg gcgcgggtct
      841 cggtttcctc gcggagacgt ccctgcaacc gaacgcgagc ctggtcatct tcggccatga
      901 ggtcctcgtc tcgttcgacc ttgctacctt cgcgctcgtc gtcctcgcgg tcgtggcgat
      961 ttcgatgttc tccggtctgt tgctcctccg aagggccatg gcagcccggc cggtcgagtc
     1021 gattcgtgag acgcccgcgg tcgcatcacc gcaatctctg gaggcgatcc tgcgcggctg
     1081 aggatcgatg gggcgctcct cggggcgctg gtgtgcgtgg cgtttgcgac gcggctcgtg
     1141 ccgctcctct tcagtccgct gccgttcggc atcgacggat tcgccctcgc acggatctcg
     1201 agcgacatcg gtgggagcgg cgcgtggcgg atcgactctt cgaacgtgaa cagttacaat
     1261 cagaagctcc ccgggttctc cttcctctgg tcggccgtcg cctccctcgg cggactctct
     1321 cccctcgcgc acgttcaact cgtgatgcct ctcctcgcgg cgctggccgt catccccgcg
     1381 tatctgttcg gcgtgaaggc gaccggccgt cgcctcggtg gcgtcgtcgc gggtttgttc
     1441 atcacgttct tcggaagctt cctcttgctg acgagctcgg tctcgaagga atcgattggg
     1501 ctggtaatct tcccggtcgc ggtcctgatg ttcctggaac ggcgcgaccc ccggaagcgt
     1561 gtactctcgg tggtcctcgt ggttttcctc gggttcctcc acccgctcac cactctgctg
     1621 gtgctcggca tgatctccgc gcaggtcgtc ctcgatcagc gccgcgcgat cagtcgcggg
     1681 agattccggg tcggatcctt ctccttggat gtggcgaccg gtcctctgct cgccatcctg
     1741 ccatgggcgt actactcctc agtcaatctg ccgttcctcg gcgatctcct ggccgcggac
     1801 gcgctcgttc tcttcctggg aatcgtcatc ctgatgaccg cgctcattgc gccgatgggt
     1861 cggcccgcga accttcggat gggtcagcga ctcgtgtccc cgctgccccg cgggattctc
     1921 gtccccgcga tcggcgtcct cgtggtgctg ggcaacgcgc ggaacggtct gttcgcagga
     1981 gcgatcggga cccagtcggg cctcttgcaa atgcttcccg cgatcggcgt cctcgccgcg
     2041 ttcgcgctcg cgggctatca gctcgtccgt cgcaccacga atcgagcgaa cgatctggtg
     2101 gtttcgatgc tcgtcgctcc cgtggccctc atcctcttcg gattgctgcg gggcctggat
     2161 ccggagagcc tcctcatcgt ctaccgctcc gtcgacttcc tcgactatgc gttcgcggtc
     2221 ctgattggcg tggcgttcgt cgcggcgtgg agatggctcg gaccatggag accggcgaag
     2281 gcggtgcttc tcgcggggtt cctcgcggcg cttctcgcga cgaccccgat ggcctggaac
     2341 acgcccgccg tgttcggcgt caacaacgtg acgacaccgc aagagttccg ggccctcgcc
     2401 ttgctcgcgt cgttcggcgc ccggaacgtc acgacggacc aacgactcgc cgacgtcggc
     2461 gcgatgtggt tcgggtactc catggactcg tccctccccg tcaagttgcg ggacaacgag
     2521 agcgtcgcgc gctttcagta cgccctggtc cttgaacgat ggacgactgt cggtgcccaa
     2581 ttgcatcccg cgccgaacgt ggtgatctcg acgaccgctt tggagaactt tctcaccgcg
     2641 aaccgaattg tgtacgccgc tgggccctcc ggtgaccgca tcttcattgt gcagttagcc
     2701 caggccacct agcccattcg tcgactcgtc ggatttcgtt gaagcggtcg taatcgcggt
     2761 cgaaggagtg gagccccgaa cccttaaata gcgaccttct cttcgagcag tttgcatggc
     2821 cgagaagaag tcccgcgccg ccgcccgcaa gatcaaggac aagtggaagg cgaaggtgtg
     2881 gtacaacctg ctcgcgccgg agatgttcaa caaacagctc ctgggcgaga cgcccacgga
     2941 cacacccgac aaactcgtcg gccgggtgac cgaggtcacg gtccaggacc tgacgggcga
     3001 cttcagcaag atgcacatca agctccagtt ccgcgtgagt gcggtgcaag gccaagacgc
     3061 gctcacgcaa ttcatcgggc acgacatgac gtcggactac atccggcggc tcacgcgccg
     3121 caagcgcacg cggaccgacc t
//
LOCUS       DATLMA010000152         1368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_559208, whole genome shotgun sequence.
ACCESSION   DATLMA010000152 DATLMA010000000
VERSION     DATLMA010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559208"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="VNA10_01910"
     CDS             <1..534
                     /locus_tag="VNA10_01910"
                     /inference="COORDINATES: protein motif:HMM:NF018213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycolipid-binding domain-containing
                     protein"
                     /protein_id="HVG36466.1"
                     /translation="TESFLLSRDETGWHLEGNVVALLDREPAHIRYRVVCDPSWRALS
                     AQISQDRAGAQRELHLTVRDDGRWWVEGEEDARLRQCTDIDLEISPSTSTIPIRRLNL
                     AVGQESEVIAAWVRFPALTAEPLHQRYSRTGANRYRYASRDFATELEVDDLGLVTRYE
                     GGWSREAAAQPDSSTLK"
     gene            573..1262
                     /locus_tag="VNA10_01915"
     CDS             573..1262
                     /locus_tag="VNA10_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HVG36467.1"
                     /translation="MPDEKPKPEAEGPPAPAPPEKAGRPSKKKDEEKEEPKAPRAPKK
                     LEGVKEDFRYIVRMANTDLDGTRSVGYALTAISGVGIRVSEAVADLAGVPRAERLGNL
                     SEEQTDKIEATLSNLGELFPPWMVNRPKDWESGLDLHLVGSEVEVRLRDDINLMKMIR
                     SYKGVRNETGQKVRGQRTRSNGRTGLTVGVTKKAALEAAKAKKAEEAAPKKEEKKEEK
                     KEEKKPAEKKE"
     gene            1267..>1368
                     /locus_tag="VNA10_01920"
     CDS             1267..>1368
                     /locus_tag="VNA10_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004033262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HVG36468.1"
                     /translation="MGDPKFSRAKFERPSHPWEAERIKAENELLKKYG"
BASE COUNT          287 a          412 c          490 g          179 t
ORIGIN      
        1 acagagagct tcctgctctc gcgcgatgag acgggctggc acctcgaggg aaacgtcgtg
       61 gccctactgg accgcgagcc ggcccacatc cgatatcggg tcgtttgcga tccgagttgg
      121 cgcgcgcttt ccgcacagat atctcaggac cgcgcgggtg ctcagcggga actccacctc
      181 acggtccggg atgacgggcg ttggtgggtc gagggcgagg aggatgcccg cctccgccaa
      241 tgcaccgaca tcgatctgga aatctctccg tccacgagta cgatcccgat ccgccggctc
      301 aacctggccg tcggtcaaga atcggaggtc atcgcagcct gggtccggtt ccccgcgttg
      361 acggccgagc ccttgcatca acggtactcg cggaccggcg cgaaccgcta tcgctatgcg
      421 agccgcgact ttgcgaccga gctcgaggtc gacgacctgg gcctcgtgac gaggtacgag
      481 ggcgggtggt cccgggaggc ggcggcccaa cccgactcct caactcttaa atagcgctca
      541 gagtttggag cacccctctc tcagggaacc gaatgccgga cgagaaaccc aaacccgagg
      601 ccgaaggccc gcccgccccg gcgccaccgg agaaggcggg acggccgtcg aagaagaagg
      661 acgaggagaa agaggagccg aaggcgccgc gggcgccgaa gaagctcgag ggcgtgaagg
      721 aggacttccg ctacatcgtc cgcatggcga acacggacct ggacgggacc cgatccgtcg
      781 ggtacgccct caccgcgatc tcgggcgtcg ggatccgggt gtccgaggcg gtggccgatc
      841 tcgccggcgt gccgcgggcc gagcggctcg gcaacctgtc ggaggagcag acggacaaga
      901 tcgaggcgac cctcagcaac ctcggcgagc tgttcccgcc gtggatggtc aaccgcccga
      961 aggattggga gtcggggctc gacctgcacc tcgtgggctc ggaggtcgag gtccgcctgc
     1021 gggacgacat caacctgatg aagatgatcc ggtcgtacaa gggcgtgcgc aacgagacgg
     1081 gccagaaggt ccgcggacag cggacgcggt cgaacggccg cacgggtctg accgtcggcg
     1141 tgacgaagaa ggctgcactc gaggccgcga aggcgaagaa ggcggaagag gcggcgccca
     1201 agaaggaaga gaagaaggaa gagaagaagg aagagaagaa accggcggag aagaaggagt
     1261 gagtcattgg gcgatccgaa gttctcccgt gcgaaattcg agcggccgtc gcatccgtgg
     1321 gaagcggagc gcatcaaggc ggagaacgag ctcctgaaga agtacggg
//
LOCUS       DATLMA010000153         1941 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_434843, whole genome shotgun sequence.
ACCESSION   DATLMA010000153 DATLMA010000000
VERSION     DATLMA010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434843"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1941
                     /locus_tag="VNA10_01925"
     CDS             <1..>1941
                     /locus_tag="VNA10_01925"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HVG36469.1"
                     /translation="REQSLRLGEVIDIGIQVADALDYSHSSGVTHRDIKPANIMITRG
                     EASGVRVRVMDFGLAHATTESRLTKTGTLVGTVAYLSPEQVASRAFDGRSDIYSLGVV
                     LYECFMGEPPFTGEVQSILYRIVHENPQPPRTLGAEIREELQDIVLRCLEKDPARRSQ
                     KAGQVAEALRRHKSSLATDEFRKSVVLSASRVIQRPVMSAFIGREKEFAELQRRLNAA
                     IAGECQFAAVAGEPGIGKTRLLEELKNLARVRKLLVLYGRFIEQDRSFSYQGFCELIE
                     DYFQSRDSGSSASERPDFSDLAADLIGLFPQLSEIGELRSAVSGDSRIAASGEEKKVE
                     DRIQIFEMLARTLTRIAGGKPLVLILENLHGAEISIEALQYIVRRLRPTPTLIVGSYR
                     QTETDKRHPLTRMLESFVDDPRFVSLTLPPFSPSEHRSLVESLVGAPKVSDDLAQRLR
                     DATEGNPFFTKELIRSLTESGGIAKDDTGVWSFSKEAAISADALPVTIQQAVEKRIER
                     LPEELRQLLSVASVLGKTFDSKDLETLAEDAKDLDDEIDRLIREGILEEERESRGNRL
                     TFSSGIVRDVLYGTLSRRKRRSLHRSYAELIEKRYTGRLERIYPELVHHFSQADVPEK
                     TVEYALKLAQKSLDAFSPEDTIR"
BASE COUNT          360 a          633 c          608 g          340 t
ORIGIN      
        1 tcgcgagcag tcgctgcgcc tgggtgaagt catcgacatc gggatccagg tcgcggacgc
       61 cctcgactac agtcactcga gcggcgtcac ccatcgtgac atcaagccgg cgaacatcat
      121 gattacgcgc ggcgaagcct cgggagtccg cgtccgcgtg atggacttcg gccttgccca
      181 cgcgaccact gagtcccggc tgacgaagac ggggactctc gtcggcaccg tcgcctacct
      241 ttcgccggaa caggtggcct cacgtgcctt cgacgggcgc tcggacattt actccctcgg
      301 ggtcgtcctc tacgagtgct tcatgggcga gccgccgttc accggagaag tgcagtcgat
      361 cctgtaccga atcgtccacg agaatccaca gccgccgcgc acgctgggag cggagatccg
      421 ggaggagctg caggacatcg tcctgcgctg cctcgagaag gacccggcca ggcgatcaca
      481 gaaagcggga caggtcgccg aagcgctgcg gcgccacaag tcgagtcttg caaccgacga
      541 gttccggaag tccgtcgttc tgagcgccag ccgtgtgatc cagcggccgg tgatgtccgc
      601 gttcatcggg cgtgagaagg agttcgcgga gctgcagcgc cggctgaacg cggcgatcgc
      661 cggtgaatgc caattcgcgg ccgtggcagg ggaaccgggg atcggcaaga cccgcctgct
      721 cgaggagctc aagaacctcg ccagggtccg aaagctcctt gtgctctatg gccggttcat
      781 cgagcaggat cgctccttct cttaccaggg tttttgcgag ctcatcgagg attactttca
      841 gtcccgcgac tcagggagct ctgcctccga gcggcccgac ttctccgacc tcgccgcgga
      901 cctcatcggc ctcttcccgc agctttccga gatcggcgag ctgcgatcgg ccgtgagcgg
      961 cgattcgcgg atcgcggcct cgggggagga gaagaaggtt gaggaccgga tccagatctt
     1021 cgagatgctg gcccgcacgc tgacccggat cgccggtgga aagcccctcg ttctgatcct
     1081 cgagaacctc cacggcgccg aaatatccat cgaggcgctc cagtacatcg tccgccggct
     1141 gcgaccgacg ccgaccctga tcgtcgggag ttaccggcag acggagaccg acaagcggca
     1201 ccccctgacc cggatgctcg aatccttcgt ggacgatccg cgctttgtgt ccttgacact
     1261 cccgccgttc tccccctccg agcacaggtc tctcgtcgag tcgctcgtcg gagcgccaaa
     1321 ggtctcggac gacctcgccc agaggctccg ggatgcgaca gaaggtaatc cgttcttcac
     1381 gaaggaactg atccggtcgc taacggaatc cggcgggatc gcgaaggatg acaccggagt
     1441 atggagcttc tcgaaggaag cggcgatctc ggccgatgcc cttcccgtga ccatccagca
     1501 ggccgtcgaa aagcggatcg agcggctccc cgaggagctg cggcaacttc tctccgtcgc
     1561 ctccgtgctg gggaagacct tcgactccaa ggacctcgag acgttggcgg aagacgcaaa
     1621 ggacctcgac gacgagatcg accggctcat ccgcgagggg atcctcgaag aggaacggga
     1681 atcccgtggc aaccggctga ctttctcgag cgggatcgtc cgcgacgttt tgtacggcac
     1741 gctttcccgt cgcaagcgtc gctcgcttca ccgtagttat gccgagttga tcgagaagcg
     1801 ctacaccggc cggctcgagc gcatttatcc ggagctcgtt caccatttct cacaggccga
     1861 cgtccccgag aagacggtgg aatacgcttt gaagctcgcg cagaagtcgc tggacgcttt
     1921 cagccccgag gacacgatcc g
//
LOCUS       DATLMA010000154         1353 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_559340, whole genome shotgun sequence.
ACCESSION   DATLMA010000154 DATLMA010000000
VERSION     DATLMA010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559340"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..862)
                     /locus_tag="VNA10_01930"
     CDS             complement(<1..862)
                     /locus_tag="VNA10_01930"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36470.1"
                     /translation="MGRNKSDLIVFVGKRLVQLLPVVLGVIVITFFFTHVAVQNPCAI
                     WAGPHATQDQIQQCIVRFGLNKPLADQFWSYLASLVSGDWGASPRGVPVLLSISSAFP
                     ATLELVLAALLIMAVIGIPLGVVAANGAGRWADHLVRTFYLSGWATPTYLGGVILAIA
                     VGPALGFPTKGDFTSTPTFPTPTHMSVLDALLALNFPAAGDAVLHLILPATSLAFLNL
                     GIATRMTRTSMLEVLPLDFVKTARMKGLSDFLVLYKHALRNSLISTVTILGITAGVLL
                     SGTVVIEEIFQ"
     gene            1117..>1353
                     /locus_tag="VNA10_01935"
     CDS             1117..>1353
                     /locus_tag="VNA10_01935"
                     /inference="COORDINATES: protein motif:HMM:NF015814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RPB7/RPC8 family DNA-directed RNA polymerase
                     subunit"
                     /protein_id="HVG36471.1"
                     /translation="MYQRVQREDVVRIPPERLGEDIDAVSRELTRTTLEGKIGADKTL
                     TLIASNIERVGEGRIVHGDGAVYQRVRYDALVFAP"
BASE COUNT          286 a          423 c          439 g          205 t
ORIGIN      
        1 actgaaagat ttcctcgatt acgaccgtcc ccgaaagaag gactcccgcc gtgatcccca
       61 agatcgtcac cgtcgagatc agggagttcc ggagcgcgtg cttgtacagc acgaggaagt
      121 cggacagccc cttcattcgg gcggtcttta cgaagtcgag aggcaggact tcgagcatgg
      181 acgtccgggt catgcgcgtc gcgatcccca agttgaggaa ggcaagcgag gtggctggca
      241 ggatcaggtg gagaaccgcg tctcctgcgg cggggaagtt cagggccagc agtgcatcga
      301 ggacggacat gtgggtcggc gtcgggaacg tcggggtgct tgtgaaatcg cctttcgtcg
      361 gaaatccgag cgccgggccc acagcgatcg ccaagatcac gcctccgaga taggtcgggg
      421 ttgcccagcc gctcaggtag aacgtccgca cgagatggtc ggcccaccga cccgcgccgt
      481 tcgccgcaac gacgccgagc ggaatgccga tgacggccat gatcaggaga gccgcgagca
      541 ccagctcgag ggtcgccggg aaggccgacg aaatcgagag caagacgggc acgcctcggg
      601 ggctcgcccc ccaatcgccc gagacgaggc tcgccagata actccagaac tggtcggcga
      661 gcggtttgtt gaggccgaac cgcacgatgc attgctggat ttggtcctgc gtcgcgtggg
      721 gtcccgccca gatcgcgcac ggattttgga ctgccacgtg cgtgaagaag aacgtgatga
      781 cgatgacgcc gaggaccacg gggagcaact gaacgagccg cttcccgacg aacacgatga
      841 ggtcgctctt attccgaccc accaaccctc accatcctcg acccaacgag gactcatgtc
      901 gtccccgcat gcagatgccc ccggagggga tcgcgccggc gctcaatcca atgagtaaag
      961 ccgcgattcc cataataagc tagaggccgc gcgccttcac agggcaccgg catgacctcg
     1021 gtattctccg tgctatcgaa tcccaacgcc tcgacagaag cgctcgcacg taaagcccta
     1081 aataggggga accggtacag ccgccagtcg attttcatgt accagcgagt ccagcgggaa
     1141 gacgtcgtcc ggatcccgcc ggagcgcctc ggggaggaca tcgacgcggt ctcccgggag
     1201 ctcacgcgga ccacactgga aggcaagatc ggagcggaca agaccctcac gctgatcgcg
     1261 agcaacatcg agcgggtcgg ggaaggccgg atcgtccacg gcgacggtgc ggtgtaccag
     1321 cgcgtgcggt acgacgccct cgtcttcgcg ccg
//
LOCUS       DATLMA010000155         2547 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_798758, whole genome shotgun sequence.
ACCESSION   DATLMA010000155 DATLMA010000000
VERSION     DATLMA010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_798758"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VNA10_01940"
     CDS             complement(<1..320)
                     /locus_tag="VNA10_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36472.1"
                     /translation="MAFGLRWGGTGVFLATEIRVQFHEWLAIVTGTLTPGALLIFVAV
                     LAPDLIAVTLIGSLVYSMFLIGQRVLNEAAYIRIDHKLNELYHASPLSPEAYFVGIAG
                     GMLVA"
     gene            complement(325..1251)
                     /locus_tag="VNA10_01945"
     CDS             complement(325..1251)
                     /locus_tag="VNA10_01945"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36473.1"
                     /translation="MPPEALRAVDVRKVYRGRGAPDVEALRGISLVLRRGERIALLGR
                     NGAGKTTFLRIASTLLIPTSGRIEVFGHDVVSTPETVRPLIAVVPQEGKPFFHLTPRE
                     QVYCYLRARGLPREEAKARTEVSLEKMGLEDVADRLSVTLSGGQKQRAMVATVLATEA
                     PLLFLDEPTIGLDPFARRAVWDVLRDLTRKGCTVLLTTHYLDEAEALSERLYIVEEGA
                     ILFEGTAEGAKRQIGGTLRVSIENGGNHREQFASFGQSVEEGDALHVITEPGRVHEIM
                     DVALREHLSATVGPVTLEEAFLTIVGRSIDAE"
     gene            complement(1363..1908)
                     /locus_tag="VNA10_01950"
     CDS             complement(1363..1908)
                     /locus_tag="VNA10_01950"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36474.1"
                     /translation="MADPMRAEEVTLKDGRRVVVRPARLSDAESLLRNVNLIGGEEVY
                     ILIDEVGPNLDEERQWLGTFDGVRTVLFVADADGESIGSADCHGGRYAKTHHVGGIGI
                     AIRDGWREVGLGRILMERILEWMRARGFKKAELAVFGSNDRARRLYESLGFEREGISR
                     RHVLIRGSYEDEILMGLWLQD"
     gene            complement(1913..>2547)
                     /locus_tag="VNA10_01955"
     CDS             complement(1913..>2547)
                     /locus_tag="VNA10_01955"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HVG36475.1"
                     /translation="TYFGDGATSEGDFHAGMNFAGVFKTPTIFFCKNNQWAISVPVSK
                     QTASKTLAQKALAYGFDGVRVDGNDLLAVYAVTKAAADKARSGGGPTMIEAVTYRMGP
                     HSSSDDPTRYRSKDEVDAWAKRDPIERMRKYLELKGLWSKESEDKLRVELEDLLQATI
                     KEVERSPPPPIETLFTDVFAELTPQLKEQMEAFLASGERRRPEILDKFPL"
BASE COUNT          418 a          887 c          794 g          448 t
ORIGIN      
        1 gcgacgagca tccctcccgc gatgccgacg aagtacgctt cgggtgagag cgggctcgcg
       61 tggtagagct cattcaactt gtgatcgatc cggatgtacg cggcctcgtt caggacgcgc
      121 tgtccgatca ggaacatcga gtagacgagc gagccgatga gcgtcacggc gatcaggtcc
      181 ggcgcgagga ccgcgacgaa gatcagcaag gcgcccggcg tcagcgtccc cgtgacgatc
      241 gcgagccact cgtggaactg gacccggatc tccgtcgcga ggaagacgcc ggtaccgccc
      301 catcggagtc cgaaggccat tcgatcactc cgcatcgatc gaccgaccga cgatcgtgag
      361 gaacgcttcc tccagggtca ccggcccgac cgtggcggac aggtgctcgc ggagcgcgac
      421 gtccataatc tcgtggaccc gtcccggttc cgtgatcacg tgcaatgcgt ccccctcttc
      481 gacgctctgg ccgaaggagg cgaattgctc ccgatggttc ccgccgttct cgatcgagac
      541 gcgcaacgtg ccgccgatct gccgcttcgc cccctccgcg gtcccttcga agaggatcgc
      601 gccttcctcg acgatgtaca gccgttccga gagcgcctcg gcttcgtcga ggtaatgcgt
      661 cgtcaggagg accgtgcacc cctttcgcgt gaggtcccgt aggacgtccc atacggcgcg
      721 tcgggcgaac gggtcgagtc cgatcgtcgg ctcgtccagg aacaggagcg gtgcctccgt
      781 cgccaacacc gtcgcgacca tcgctcgctg cttctgcccg cccgacaagg tcaccgagag
      841 ccgatccgcc acatcctcga ggcccatttt ctccagcgaa acttcggtcc gcgccttcgc
      901 ctcctcgcgc ggcagcccgc gcgcccgaag gtagcagtac acctgctccc gcggcgtgag
      961 gtggaagaac ggctttccct cctggggcac gacggcgatg aggggcctca ccgtttccgg
     1021 cgtgctcacg acatcgtggc cgaacacctc gattcgtccg gacgtcggga tgagcaaggt
     1081 cgaggcgatc cgaaggaacg tcgtcttgcc ggcgccgttg cggccgagca gtgcgattcg
     1141 ttcgcctcgc cggaggacga gggagatgcc tcgcaacgct tcgacgtcgg gcgcgccccg
     1201 accacggtac actttccgca cgtcgacggc gcggagcgcc tccgggggca cgggccggag
     1261 caagccgaca ctgcgtataa aactagattc cgttcagttc gatccctcga agccgggatg
     1321 ctcgctcttc tcgaacatcg caaacgccgc ttcgatggac tcctagtcct gcagccacag
     1381 acccatgagg atctcatctt cgtacgagcc gcggatgagc acgtggcggc ggctgatgcc
     1441 ctcgcgctcg aagccgaggg actcgtacaa gcggcgcgcc cgatcgttcg agccgaagac
     1501 cgcgagttcg gccttcttga aaccgcgggc gcgcatccac tcgaggattc gctccatcag
     1561 gatgcgcccg aggccgacct cccgccatcc atcgcggatc gcaatcccga ttcctccgac
     1621 gtgatgggtc ttcgcgtacc gcccgccgtg gcagtccgcc gagccgatcg actctccgtc
     1681 cgcgtcggcg acgaacagga ccgtccgcac tccatcgaag gtcccgagcc attgccgctc
     1741 ctcgtcgagg ttcggaccga cctcatcgat caggatgtaa acctcctcgc ccccgatgag
     1801 attcacgttc cggaggagcg actccgcatc gctgagacgg gccggccgaa cgacgactcg
     1861 ccggccgtcc ttgagggtga cctcttcggc ccgcatcggg tcggccatgg cgtcacagcg
     1921 ggaacttgtc gaggatctcc ggccggcggc gctcgccgct cgcgaggaac gcctccatct
     1981 gctctttcag ctggggcgtc agctccgcga agacatcggt gaacagggtc tcgatcggag
     2041 gcggcgggct tcgctcgacc tccttgatcg tcgcctgcag gaggtcttcg agctcgaccc
     2101 gaagcttgtc ttcggactcc ttcgaccaca gccccttgag ctcgaggtac ttccgcatcc
     2161 gttcgatcgg atcgcgcttc gcccacgcgt cgacctcgtc cttcgagcga taccgcgtcg
     2221 ggtcgtcgct tgaggagtgc ggccccatgc gatacgtgac cgcctcgatc atcgtcgggc
     2281 cgccgccgct ccgcgccttg tccgcggccg ccttcgtgac cgcgtagacc gcgagcagat
     2341 cgttcccgtc gacgcggacg ccgtcgaagc cgtacgccaa ggccttctgt gccagggtct
     2401 tcgaggcagt ttgcttggag accggaaccg agatggccca ctggttgttc ttgcagaaga
     2461 agatcgtcgg ggtcttgaag acgcccgcga agttcatccc ggcgtggaag tcgccctcgc
     2521 tcgtggcgcc gtcgccgaag tacgtga
//
LOCUS       DATLMA010000156         1458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_677556, whole genome shotgun sequence.
ACCESSION   DATLMA010000156 DATLMA010000000
VERSION     DATLMA010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_677556"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..978)
                     /locus_tag="VNA10_01960"
     CDS             complement(214..978)
                     /locus_tag="VNA10_01960"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HVG36476.1"
                     /translation="MADLSSSPYFLLILFIAAFALPLLYLIWIRNSPRYGREPWPTVL
                     KTFAWGAVFSVIIAIILSILFLLVLSPSQSLNDFFARRFQDPTTAIGALVVAPIVEEA
                     AKGVGATAGRPQTQSKTDGLVYGAAAGLGFSATENLVYALAALLVPGVGPSGSLVIVA
                     VRSFSSTFLHASSTAVMGYGLAKSWLSGRPWAVFPFYIVAVAMHATFNLFSTLAAEQT
                     DPAGAAIAFLAAVSLAIVAISVVRLKLVSRRAPTSR"
     gene            complement(991..>1458)
                     /locus_tag="VNA10_01965"
     CDS             complement(991..>1458)
                     /locus_tag="VNA10_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014958200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HVG36477.1"
                     /translation="VMDREGISVDYKFGTMIEIPRAALVADEIARHAEFFSFGTNDLT
                     QTTMGYSRDDAEPKFLLDYVEQGILPSNPFQTIDRDGVGQLMRMCVQKGRKVRRDLEV
                     GICGEHGGDPVSIEFCHEIGLNYVSCSPFRVPVARLAAAHAKLRQGTTRAKDT"
BASE COUNT          291 a          453 c          470 g          244 t
ORIGIN      
        1 tcccgatcga agaccgccgt cacccgctcg ctcccactcg cccagaatgg acgatcgaga
       61 ctgccccgcc aacggaggcc gtgcttcgcg aggatcctct tgaaggcctc tttgtttttc
      121 gagtaggttt ccccaggcat ctcgaagcga aaacgcatgt gccgtggtgc acgcggtccc
      181 gcgtaaataa tatttcgcgc ggagggaccc gggctatcga gaggtagggg cccgacggct
      241 gacgagcttc agtcgcacga cggagatcgc gacaatcgcc agactcactg cagccagaaa
      301 ggcgatcgct gcgccggccg gatcggtctg ctcggccgcc agggtcgaga agagattgaa
      361 cgtcgcatgc atcgccacag cgacgatgta gaatggaaag accgcccatg gacggccgga
      421 gagccaggac ttcgccagcc cgtatcccat caccgcggtc gagctcgcat ggagaaacgt
      481 cgaggagaaa gaccggaccg cgacgatcac aagcgagccg gagggcccga cgcccggcac
      541 gagaagggcc gcgagcgcat agaccagatt ctccgtcgcg gagaacccta agcccgctgc
      601 ggcaccatag acgaggccgt cggtcttcga ttgcgtctgc ggacggcccg cggtcgctcc
      661 cacccctttc gcggcttctt ccacgatcgg cgcgacgacg agcgccccaa tcgccgtggt
      721 cgggtcctgg aagcgccgcg caaagaaatc gttcaaggac tggctcgggc tgaggacaag
      781 gaggaaaagg atgctgagga tgatcgcgat gatcacgctg aatacggcgc cccatgcaaa
      841 ggtcttcagc acggtcggcc agggctctcg gccgtatcgc ggagagttcc ggatccaaat
      901 gaggtagagc agcggcaacg cgaaggccgc gatgaacagg atgaggagaa aataggggga
      961 actcgagagg tccgccatgc gcgtcctcgg tcaggtgtcc ttggcccggg tggttccctg
     1021 gcgtagtttc gcgtgggccg ccgcaagccg ggcgaccggg actcggaacg gtgagcagga
     1081 cacgtagttc agtccgattt cgtggcagaa ctcgatgctc acggggtcgc ctccatgttc
     1141 gccgcaaatg ccgacctcga gatcccgtcg aaccttgcga cccttttgga cgcacatccg
     1201 catgagctga ccgaccccgt cgcggtcgat cgtctggaac gggttgctcg ggaggatccc
     1261 ctgctcgacg taatccaaga ggaacttcgg ctccgcgtca tcccggctgt atcccatcgt
     1321 cgtctgggtc aggtcgttcg tcccgaacga gaagaattcg gcgtggcggg cgatttcgtc
     1381 ggcgacgagt gcggccctcg ggatctcgat catcgtgccg aacttgtagt ccacggagat
     1441 cccttcccgg tccatgac
//
LOCUS       DATLMA010000157         1328 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_137068, whole genome shotgun sequence.
ACCESSION   DATLMA010000157 DATLMA010000000
VERSION     DATLMA010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137068"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1117
                     /locus_tag="VNA10_01970"
     CDS             <1..1117
                     /locus_tag="VNA10_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HVG36478.1"
                     /translation="RIGRGKRELGRFFDVAERLYRNDPNWVPPLRSDLAKVLSDENPF
                     FRHAEMQLFVARRGARDVGRIAAILDRGHNAFHGEQTSFFGFFECENDPEVARLLFDA
                     AALWGRERKMSVLRGPVNPSLNDEAGLLVDGFGSPPIVMMTYNPAYYPALLEGAGFRK
                     AKDLLAYFFEVAPTPQGRLERMAERVRRKEPDVIVRTVSKKTLEADLPKIREVYNTAW
                     EKNWGFVPMTDEEMDFMAGRLKPLLDEDFVFLAERRHEDGTLEPVAFMMSMPDYNRAI
                     AAAKGRLLPFGWLRFLLAQRKIRTLRVVTLGIKAEYRLRGLNAIMFAAGLKAALKRGL
                     TGVEISWLLEDNPMVLRTVDLWGGKLYKTYRIYDRAI"
     gene            complement(1114..>1328)
                     /locus_tag="VNA10_01975"
     CDS             complement(1114..>1328)
                     /locus_tag="VNA10_01975"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HVG36479.1"
                     /translation="GHTMITTAVLIVAWRRAWKLFWWLLPAATLLIFSTMYCRYHYLV
                     DVIAGIVLAFATVPVGDWLYDRLTRR"
BASE COUNT          239 a          422 c          452 g          215 t
ORIGIN      
        1 acggatcggc cggggcaaga gggaactcgg tcgcttcttc gacgtggcgg agaggctcta
       61 ccggaacgat ccgaactggg tcccgcccct gcgctccgat ctcgcgaaag tgctctcgga
      121 cgagaacccc ttcttccggc acgcggaaat gcagctcttc gtcgcgcggc gcggtgcaag
      181 ggacgtcggc cgcatcgccg cgatcctgga tcgcgggcac aacgctttcc acggcgagca
      241 gacctcgttt ttcgggttct tcgagtgcga gaacgacccg gaggtcgccc gcctcctctt
      301 cgacgccgcc gcgctgtggg gccgggaacg gaaaatgagc gtgctacgcg gcccggtcaa
      361 cccctcgctg aacgacgagg cgggactcct ggtcgacggg ttcggttccc cgccgatcgt
      421 catgatgact tacaacccgg cgtactaccc ggcgctcctc gagggcgcgg ggttccggaa
      481 ggcaaaggat ctcctcgcgt actttttcga ggtcgcgccg actccccagg gacggctcga
      541 gcgtatggcc gagcgggtgc gccggaaaga gccggacgtc atcgtccgga cggtcagcaa
      601 gaagacgctc gaggcggacc tgccgaagat ccgggaggtc tacaacacgg cctgggagaa
      661 gaactggggt ttcgtgccga tgaccgacga ggagatggat ttcatggcgg gtcgcctgaa
      721 gccccttctc gacgaggact tcgtcttcct ggccgagcgg cggcacgaag acggcacgct
      781 cgagccggtc gcgttcatga tgtcgatgcc cgactacaac cgggcgatcg cggcggcgaa
      841 ggggaggctg ctgccgttcg ggtggctccg gttcctgctc gcgcagcgga agatccgcac
      901 cttgcgggtc gtgaccctcg ggatcaaggc cgaataccgc ctgcgcggat tgaacgccat
      961 catgttcgct gccggcctga aggcggcgtt gaagcgcggc ctgaccggcg tcgaaatctc
     1021 gtggctcctg gaagacaacc cgatggtgct ccggaccgtg gatctctggg gcggaaagct
     1081 ctacaagacc taccggatct acgaccgggc gatctagcgt cgggtcaggc gatcgtagag
     1141 ccagtcaccc accgggaccg tggcgaaggc cagcacgatc ccagcgatca cgtcgacgag
     1201 gtagtggtac cggcagtaca tcgtcgagaa gatcaggagc gtcgccgccg gcagcagcca
     1261 ccagaacagc ttccaggcgc gccgccaggc gacgatcagt accgcggtcg tgatcatcgt
     1321 atggcccg
//
LOCUS       DATLMA010000158         1821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_75885, whole genome shotgun sequence.
ACCESSION   DATLMA010000158 DATLMA010000000
VERSION     DATLMA010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75885"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VNA10_01980"
     CDS             <1..498
                     /locus_tag="VNA10_01980"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG36480.1"
                     /translation="VIAGRGHRAVALDFSRRLLLIGRAGERRTEDALRIDWVGGEATK
                     LPFRDASFDAGLCIAVLHHLLVESDRIAALMELRRVLRRRAPVFVSVWAREQPRFQSM
                     PGAPEVDGDVEVPWTMPDKTVVPRFYHLFQKGELERLIIGSGLHGERFFPAAGNWFAQ
                     ARTNG"
     gene            491..679
                     /locus_tag="VNA10_01985"
     CDS             491..679
                     /locus_tag="VNA10_01985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36481.1"
                     /translation="MADPLGTVNGFFSTILGNPVYLLLTIGGLAFFALLVVAHHIHKI
                     HGEEIFVHQAWGANWKGR"
     gene            736..1119
                     /gene="gcvH"
                     /locus_tag="VNA10_01990"
     CDS             736..1119
                     /gene="gcvH"
                     /locus_tag="VNA10_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013777472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HVG36482.1"
                     /translation="MSNVPEGLRYTKDHEWAKLEGKRAGIGITDFAQDQLTDVVYVEL
                     PPIGKTVKQGEPIGTVESVKAVSEIFAPISGTVVEVNKALVDKPDLVNKDPYGEGWMV
                     VLDVAEPAQANALMDPTAYRKHIGD"
     gene            1171..1245
                     /locus_tag="VNA10_01995"
     tRNA            1171..1245
                     /locus_tag="VNA10_01995"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1207..1209,aa:Arg,seq:tcg)
     gene            complement(1258..>1821)
                     /locus_tag="VNA10_02000"
     CDS             complement(1258..>1821)
                     /locus_tag="VNA10_02000"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG36483.1"
                     /translation="VDAFGGGFIGQSILSYYFYLRFGLDLSTLGAIFFATQLVTALSF
                     LLAERIARRIGLLRTMVFTHVPSNVLLIAVAFAPTPLSAVSVLLCRQSLSQMDVPTRQ
                     SYVMSIVDEQDRTAAAGLTSATRTVSSSVSPSLAGYALANLWLGTPLVAAGSFKLAYD
                     LLIYRNFRKVRPPEELEVNSNSTTRRP"
BASE COUNT          357 a          550 c          583 g          331 t
ORIGIN      
        1 gtcatcgcgg gccgaggcca tcgcgccgtg gcgctcgact tctcccgacg cctcctgtta
       61 atcgggcgcg ccggtgaacg tcgaacagaa gatgccctcc gcatcgattg ggtcggcggc
      121 gaagcgacga aactgccgtt ccgggatgca tcgttcgacg cgggcctgtg cattgcggtc
      181 ttgcatcatc tcctggtcga gtcggatcgc atcgcggcgt tgatggagct ccgccgcgtc
      241 ctacggcgac gggcccccgt gttcgtgagc gtgtgggcgc gagagcagcc gcgctttcaa
      301 tccatgcccg gggcgcccga ggtcgatggg gacgtcgaag tgccgtggac gatgcccgac
      361 aagaccgtcg ttccgcggtt ctaccatctg ttccaaaagg gcgagctgga gcgattaatt
      421 atcggatcgg ggcttcacgg agaaaggttt ttccccgccg ccggaaactg gttcgctcag
      481 gcacgaacga atggctgatc cgctcggtac cgtgaacggc ttcttctcca cgatcctggg
      541 gaatcctgtc taccttctgc tcacgatcgg cgggctcgca ttcttcgccc tcctggtggt
      601 ggcccaccac atccacaaga ttcacggcga agagatcttc gtccaccagg cctggggcgc
      661 gaactggaaa ggccggtagc gcgcgaaact ctcatatctg cacggccgca tcgaggcggt
      721 ccggttggag tcaatttgtc gaacgtcccg gaggggctgc gctacacgaa ggaccatgag
      781 tgggcgaagc tcgaaggcaa gcgggccggg attgggatta cggactttgc ccaggatcag
      841 ctcactgacg tcgtatacgt tgagctaccg ccgatcggga agaccgtcaa gcaaggagag
      901 ccgatcggga ccgtcgagtc cgtgaaggcc gtgagcgaga ttttcgcgcc gatcagcgga
      961 accgtcgtcg aggtcaacaa ggctctcgtg gacaagcccg acctggtgaa caaagatccc
     1021 tatggcgaag gatggatggt cgtcctcgat gttgcggagc ctgcgcaagc caacgccctg
     1081 atggatccga ctgcgtaccg aaagcacatc ggtgactgac ccgatcatcc atttgggaac
     1141 ccttttatca agggctatgg ttcgaccgcc gggcacgtcg gctagtttgg actaggctat
     1201 gggccttcgg agcctaagac gggggttcga atccctccgt gcccgctctt ctcgaggtca
     1261 cggccggcgc gtcgtcgagt tcgagttgac ctcgagttcc tccggcggac gtaccttccg
     1321 gaagttcctg taaatcaaca ggtcatacgc caacttgaag gatcccgcag ccaccaacgg
     1381 cgtgccgagc cagaggttcg cgagcgcgta acccgccagc gacggactga ccgatgacga
     1441 gaccgttcgc gtggcgctcg tgaggcccgc cgcggcggtc cggtcttgct cgtccacgat
     1501 cgacatgacg tacgattgcc tcgtgggcac gtccatctgc gataacgact gacgacagag
     1561 gaggacggag accgcgctta gcggcgtcgg agcgaacgcc accgcgatca gcaagacgtt
     1621 cgagggcacg tgggtgaaga ccatcgtccg taacaggccg atcctccgag cgattcgctc
     1681 cgccaacagg aacgaaagcg cggtgacgag ctgggtcgcg aagaagatcg cccctagcgt
     1741 ggagagatcc agcccaaatc ggaggtagaa gtagtacgac agaatgctct gtccgatgaa
     1801 gccgccgccg aacgcgtcca c
//
LOCUS       DATLMA010000159         1423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_858437, whole genome shotgun sequence.
ACCESSION   DATLMA010000159 DATLMA010000000
VERSION     DATLMA010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858437"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..>1423)
                     /locus_tag="VNA10_02005"
     CDS             complement(89..>1423)
                     /locus_tag="VNA10_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36484.1"
                     /translation="RFTIWFNNTGTEIASQVWINITLPSGFAFDSDNASSIGGLRAPG
                     TTDWTFWNVARGSHFYRATASINGGVVAGAFLVVGVSLDYTDFLGLPRTGSTASLSML
                     VTAGAPPGPVGLDVSAWLAVAGVLAATVVAFVIWRGGRIEEIFLVHWSGVLVVHLSKT
                     IKSSTDRDILAAMLTTIQQFAREAFVEWQGHDIRRIDLGSQKVFLRRGSYTYLAAVVR
                     GRKPGSLASRMARSVVEFEGIFEPKLEEWDGALETLVGAEEMLSAAMLQGGFIRFMRW
                     VIRRLRPRGDRPPASLASILQDRRRARLSKQADLRKLAVRLKQRPELAEMDENYQSMV
                     ATALEEVSEGRFTVCGFANIYLATAHLDPSSPKNDAWWGTVLQMTRDVLHLWKWDAES
                     QAWVSERYEASHSRRSEADARATGAPNAPHARETILPSRVRTLDTLPLTKDG"
BASE COUNT          273 a          470 c          432 g          248 t
ORIGIN      
        1 ttcgtggatg tcagaggctg cggcgtctta ggcgggcgac tctcgcaccc gtccttcgat
       61 cggtccggcg atggcaagtc cgaatccctc aaccgtcttt cgtcagaggc agcgtatcca
      121 atgtccggac acgcgacgga aggatcgtct cgcgggcgtg gggtgcgttg ggcgccccgg
      181 tggcccgagc gtcggcttcc gaccgccgtg agtgggatgc ctcgtaacgc tcggagaccc
      241 atgcctggct ttcagcatcc catttccaga gatgcaagac gtcccgggtc atctgaagta
      301 cggtgcccca ccaggcgtca ttcttcgggc ttgacgggtc gaggtgcgcc gtggccaggt
      361 agatgttggc gaaaccgcag acggtgaaac gaccctccga gacctcttcg agcgccgtcg
      421 cgaccatcga ttgatagttc tcgtccatct cggccaactc cgggcgttgc ttcagtcgga
      481 ccgccaactt ccgcaaatct gcctgcttgc tcaatctcgc ccggcgccgg tcttgcagga
      541 tcgaggccaa cgacgccggc ggacgatcac cgcggggccg gagtcttcga atgacccatc
      601 tcatgaaccg aatgaatccg ccctggagca tcgcagcgga caacatctcc tcggcgccga
      661 ccagcgtttc cagggcaccg tcccactcct ccagcttggg ttcgaaaatc ccctcgaact
      721 ccacgaccga cctcgccatc cgcgaagcga gactgccggg cttccggccc cggacgacgg
      781 cggcgaggta ggtgtacgaa ccgcgccgta ggaaaacttt ctggctcccg aggtcgatcc
      841 ggcgaatgtc gtgaccctgc cactcaacga aagcctcccg cgcaaattgc tgtatcgtcg
      901 tgagcatggc cgccaagata tcgcgatccg tcgagctctt gatcgtcttc gagaggtgca
      961 cgacgaggac gccgctccaa tggaccagga agatctcttc gatccgccct ccacgccaaa
     1021 tcacaaacgc gacgacggtc gccgcgagga cacccgcgac cgcgagccaa gcagatacgt
     1081 cgagcccgac cgggcccggc ggggcacccg cggtgacgag catgctcaga ctcgccgtgg
     1141 aaccggttcg cggaagtcct aggaagtctg tgtagtccag ggacaccccg acgaccagaa
     1201 acgcgcctgc cacgacgcca ccgttgatgg atgcggtcgc gcggtagaaa tgcgatccgc
     1261 gcgcgacgtt ccagaacgtc caatccgtcg tgccgggagc cctaaggccg ccaatcgagc
     1321 ttgcattgtc ggaatcgaac gcgaatccgg acggaagcgt gatgttgatc cagacctgcg
     1381 aggcgatctc cgtgccggta ttgttgaacc agatcgtgaa gcg
//
LOCUS       DATLMA010000160         1834 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_195168, whole genome shotgun sequence.
ACCESSION   DATLMA010000160 DATLMA010000000
VERSION     DATLMA010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195168"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..1455)
                     /gene="sufB"
                     /locus_tag="VNA10_02010"
     CDS             complement(4..1455)
                     /gene="sufB"
                     /locus_tag="VNA10_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011485150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HVG36485.1"
                     /translation="MVSKSVIQEQMAKQEYKYGFVSDLDEDIAPKGLNEDIVRLISRK
                     KKEPEWFLEWRLRAYRHWLTMKEPKWSNVTYPPINYQDMIYYAAPKPKKPVNSLEDVD
                     PEIRNLYAKLGIPLQEQERLAGVAVDAVLDSVSVATTFKDRLAELGIIFCSFSEAVQE
                     HPDLVRKYLGTVVPFNDNFFAGLNSAVFSDGSFAYVPPGVRCPMELSTYFRINAQDTG
                     QFERTLIIADEGAYVSYLEGCTAPIRDTNQLHAAVVELIALDNAEIKYSTIQNWYPGD
                     KNGKGGIYNFVTKRGKALGANSKVSWTQVETGSAITWKYPSCILQGDNSVGEFYSVAL
                     VNNYQQADTGTKMLHIGKNTRSTIISKGISAGYGRNTYRGRVQIHKGATNARNYSQCD
                     SLLIGSTCAAFTFPDIQVQEPTAQMEHEASTSKIGEEQLFYCQARGITPEDATNMIVN
                     GFCKQVFLKLPMEFAVEAQKLIGVSLNLEGTVG"
     gene            1625..>1834
                     /locus_tag="VNA10_02015"
     CDS             1625..>1834
                     /locus_tag="VNA10_02015"
                     /inference="COORDINATES: protein motif:HMM:NF013671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HVG36486.1"
                     /translation="MAPQQLPLTVTASAVRRIRVLRQKENKPAASLRLRIIAGGCSGM
                     QYRMDHAEAARPTDVVVAEEDVSVFV"
BASE COUNT          299 a          558 c          591 g          386 t
ORIGIN      
        1 cgctcacccg accgtgccct cgaggttcag gctcacaccg atcagtttct gggcttcgac
       61 cgcgaactcc atcgggagct tcaggaagac ctgtttgcag aagccgttca cgatcatgtt
      121 cgtcgcgtct tccggcgtga tgccgcgcgc ctggcagtag aagagctgtt cctccccgat
      181 cttcgaggtc gacgcctcgt gctccatctg cgcggtcggc tcctggacct ggatgtccgg
      241 gaaggtgaac gcggcgcacg tcgagccgat caggagggaa tcgcactggc tgtagttgcg
      301 ggcgttcgtg gcgcccttgt ggatttgcac gcggccgcgg taggtgttgc gaccgtatcc
      361 ggcggagatc cccttcgaga tgattgtgct gcgcgtgttc ttcccgatgt gcagcatctt
      421 cgtgccggtg tcggcttgct ggtagttgtt gaccagcgcg acggagtaga actcgccgac
      481 cgagttgtcg ccctggagga tgcagctcgg atacttccag gtgatcgcgg atccggtctc
      541 gacctgcgtc cacgagactt tcgagttcgc gccgagggcc ttcccgcgct tcgtgacgaa
      601 gttgtagatg ccgcctttcc cgttcttgtc ccccgggtac cagttctgga tcgtggaata
      661 cttgatctcc gcgttgtcga gggcgatcag ctcgacgacc gccgcgtgca gctggttcgt
      721 gtcgcggatc ggggccgtgc agccttcgag gtagctgacg tacgcgcctt cgtccgcgat
      781 gatcagggtg cgctcgaact ggcccgtgtc ctgcgcgttg atccggaaat acgtcgacaa
      841 ttccatcggg caccggacgc ccggggggac gtaggcgaac gacccgtcgc tgaagacggc
      901 gctgttgaga cccgcgaaga agttgtcgtt gaagggcacc acggtgccca ggtatttccg
      961 cacgagatcc gggtgctcct ggaccgcctc ggagaatgag cagaagatga tcccgagctc
     1021 cgcgagccgg tctttgaacg tcgtcgcgac ggagacactg tccaggaccg catcgaccgc
     1081 gacgccggcg aggcgctcct gctcctgcag cgggatcccg agcttcgcgt acaggttccg
     1141 gatctccgga tcgacgtcct cgaggctgtt caccggcttc ttcggcttcg gcgcggcgta
     1201 gtagatcatg tcctggtagt tgatcggcgg ataggtgacg ttcgaccact tcggctcttt
     1261 catcgtgagc cagtgacggt acgcccgcag acgccactcg aggaaccatt cgggctcctt
     1321 cttcttgcgc gaaatgagcc ggacgatgtc ctcgttgagg cccttcgggg cgatgtcctc
     1381 atcgagatcg gaaacgaagc cgtacttgta ctcctgcttc gccatttgct cctggattac
     1441 gctcttggaa accatggcca cgcctcccgt tttcgagaag cggaatggaa actataacgt
     1501 tgttatatat atctttggtc gtacgtgcgg cgaatgacct gcgacggtcg tcgcccatgc
     1561 gattcgcggc ggaagactta agacgcgggc ccgcgttcga acgatccgag acgcgattcg
     1621 tttgatggcc ccccagcaac tgccgctcac cgtcaccgcg agcgcggtcc gacggatccg
     1681 cgtactgcgg cagaaggaga acaagccggc cgcctcgctc cgccttcgga tcatcgcggg
     1741 cgggtgcagc gggatgcagt accggatgga tcacgcggag gccgcgcggc cgacggacgt
     1801 cgtcgtcgcc gaggaggacg tgagcgtgtt cgtt
//
LOCUS       DATLMA010000161         1626 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_858658, whole genome shotgun sequence.
ACCESSION   DATLMA010000161 DATLMA010000000
VERSION     DATLMA010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858658"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VNA10_02020"
     CDS             <1..192
                     /locus_tag="VNA10_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36487.1"
                     /translation="APVFAGVIPSLETLGPSDSARAVIIFVSLFLIPIHLVGCVAGYA
                     LADFLAPEGLHGRRDLERL"
     gene            656..>1626
                     /locus_tag="VNA10_02025"
     CDS             656..>1626
                     /locus_tag="VNA10_02025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36488.1"
                     /translation="MKLDSSLRDIAVQGSKDLQSVVIYTDDMSALAPLLAKYGVQSLP
                     EEFRGQSVRSEARLQTTAQGIVSTAVSVPASALSTIANLPGVLGIDANNRPAMADFTN
                     YDLTATRQALNAFREKQSSPPGDIAPADWGIVQAHHAPDAWPIATGAGVNIAVQDWGT
                     DFAHPNLYNASTGVGRWAVDSNPASPYFGYPIMHSQFSLWNELALFTASSDLDRVPYP
                     AFASFAAATWFTDTSYRATASGTGTLRYATGFAYGFLQLTNRVAPTWTSCPGASTRIS
                     RTYTVGTPADSWAIPSASGWYHLGVNKDQYLEGIHCERPGILVTDSTT"
BASE COUNT          293 a          555 c          469 g          309 t
ORIGIN      
        1 gcaccagtgt tcgcgggggt catcccgagt ctcgagacgc tcggtccttc ggactccgcc
       61 cgcgcggtga tcatcttcgt ctcgctgttc ctgattccca tccacctcgt gggctgtgtc
      121 gcgggctatg cccttgcgga cttcctggct cccgagggtt tgcacggccg ccgggacctc
      181 gaacgcttgt agtcctccgc cgactcggcc ggatgacctg ctacggttag gacaacgttc
      241 gaatcattac ttccatataa taatcattag ataataatcg caacgggagg aaatcgccct
      301 cggatcgaga acggattcac cccaggccgg cgacgcaatc gaagacaggg caggccgccc
      361 aggcggcctg gtcaatttgg ggaatttatt tatacgctcg aacgaatccc gggaggcttt
      421 tgttggggag aggagtcgaa tgtcgaatac caccgctcgc agagcgctaa gctttctgat
      481 cgtcggcgcg atggttctgg caggcctctt cgttctcgtg acggcggcac ccgttgcctc
      541 cgctcgcgcg atcgatgcgc ccgccgcgcc aacgacaggt gtcacgtcgt cgcctttgaa
      601 ctcggtagtc ccgtccacgc tttcgaatcc cgctgcgcaa ccggattcgt ggcggatgaa
      661 gctggattct tcattgaggg acatcgccgt tcagggctcg aaagatctcc aaagtgtcgt
      721 catctacacg gacgacatga gtgcgctcgc gcccttactg gccaagtacg gagtgcagtc
      781 gctcccggaa gagttccggg gccagtcggt ccgttccgaa gcgcgactcc agacaaccgc
      841 gcaaggaatc gtctcgacgg cggtcagcgt tcccgcgtcc gcgctctcga ccatcgcgaa
      901 cctcccgggc gtcctcggca tcgacgcgaa caaccgccct gcaatggcgg acttcacaaa
      961 ctacgatctc acggcaacgc gccaagcgtt gaacgcgttc cgcgagaagc aatcgtcgcc
     1021 tcccggcgac atcgcgcccg ccgactgggg catcgtccag gctcaccacg cacccgatgc
     1081 atggccgatc gccacaggcg ccggtgtcaa catcgccgtc caggattggg gcaccgattt
     1141 cgcgcatccg aacctctaca atgcgtcgac cggtgtcggt cgatgggcgg tcgactcgaa
     1201 ccccgcgtcc ccgtacttcg gctatccgat catgcacagc cagttctccc tctggaatga
     1261 gctggctttg ttcacggctt ccagcgacct cgaccgcgtc ccgtatcctg cgttcgcctc
     1321 ctttgcagcc gccacgtggt tcaccgacac gagctaccgg gcgaccgcga gcggaacggg
     1381 caccttgagg tatgcgacgg gcttcgcgta cggcttcctc caattgacga accgggtggc
     1441 tccgacctgg acgagttgcc ccggcgccag cacccgcatc agccggacgt acaccgtcgg
     1501 cacgcccgcc gactcctggg ccatccccag cgcgagcggc tggtaccacc tcggggtcaa
     1561 caaagaccag tacctcgagg gaatccactg cgagcgtccc ggaatcctcg tgaccgactc
     1621 cacgac
//
LOCUS       DATLMA010000162         1319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_137612, whole genome shotgun sequence.
ACCESSION   DATLMA010000162 DATLMA010000000
VERSION     DATLMA010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137612"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1115)
                     /locus_tag="VNA10_02030"
     CDS             complement(<1..1115)
                     /locus_tag="VNA10_02030"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HVG36489.1"
                     /translation="MLSPEAEIETLRAAVARQFSVYGVVVSPMALTFQVGIPPGGVDA
                     PFDALRLELVPKDYIPTITQEKGETLVHIQRRPRPRFARTQVNLILLLVTVLTTTFFG
                     GAWNWADYSGKQFLSAESIGFGSLFFTVPLLTILGSHEMGHYLVAKRYKVQASLPFFL
                     PSVPPLGTFGAFISMRDPIPNRRALLDIGVSGPLVGFAIAIPVTLAGLALSAASPANG
                     LTLAGQAQPSLLFRALSLFFPLPETLLSHPHPLAFAGWVGLFVTAINLLPAGQLDGGH
                     VARALLGSRQLYLSWSAVLILFGLSLFYPGWFLFGFLILVLGVRHPPPLNDLTHLDPG
                     RKLIGIAAVAILIVTFVPQPFVTVASERGLAFVASDGT"
BASE COUNT          293 a          393 c          454 g          179 t
ORIGIN      
        1 gtgccatcgc tcgccacgaa cgcgagaccc cgttcgctcg cgacagtcac gaacggctgc
       61 ggaacgaagg tcacgatcag gattgcgacc gccgcgatgc cgatcagctt gcggccaggg
      121 tcgaggtgtg tcaggtcatt cagcggcggc ggatgtcgca ccccgaggac gagaatcagg
      181 aatccgaaca ggaaccaacc gggatagaag aggctcagtc cgaacaggat caggaccgcg
      241 gaccaggaca ggtaaagctg gcggcttccg aggagcgccc tcgcgacgtg gcctccgtcg
      301 agttggccag cgggcaggag gttgatcgcg gtcacgaaca atccgaccca gccggcgaag
      361 gcaaggggat gcggatggct gagcagcgtc tccggcaatg ggaagaacaa ggacaaggcg
      421 cggaacagaa gggacggctg cgcctgcccc gcgagggtga ggccgttggc gggcgatgcc
      481 gcggacaacg cgagtcccgc caaagtgacg ggaatcgcga tggcgaatcc gacgagcggt
      541 cccgatacgc cgatatccag aagcgcgcgg cgattcggaa tcgggtctct catgctgata
      601 aacgcgccga acgtgccgag gggcgggacg gagggcagga aaaacggaag ggaggcctgc
      661 accttgtatc gcttcgcgac gagatagtgg cccatctcgt gggaaccgag gatcgtcagg
      721 agcggaacgg tgaagaacag actgccgaat ccgatcgact cggcggacaa gaactgcttc
      781 cctgaatagt ccgcccagtt ccacgccccc ccgaagaacg tcgtcgtgag cacggtgacg
      841 aggagcagga tgagattcac ctgcgtcctc gcaaaacgcg gtcgcggccg tcgttggatg
      901 tggacgagag tctcgccttt ctcctgggtg atcgtcggga tgtagtcttt cgggaccagc
      961 tcgagtcgca aagcgtcgaa cggcgcgtcg acgccgcccg gaggaatccc gacttggaac
     1021 gtcagcgcca tcggactgac gaccacgccg tacacggaaa actggcgcgc caccgcggcc
     1081 cggagcgtct caatctccgc ctccggggag agcattgcgc gagccaacct tcccacgtat
     1141 taaaaggtgc gcgcctcaga tgggacgggc tcccatgaac cagaggagga ccgcggtgcc
     1201 gaggccggcg gccacaaagc gaaggcccgt gacgatcacg agttcgcgga cgaggttccc
     1261 caggtacgcg ccgatcacga acaagaccac gaaggtgatg acgatcgcgg cgatcgtcg
//
LOCUS       DATLMA010000163         1146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_799288, whole genome shotgun sequence.
ACCESSION   DATLMA010000163 DATLMA010000000
VERSION     DATLMA010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799288"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1101)
                     /locus_tag="VNA10_02035"
     CDS             complement(<1..1101)
                     /locus_tag="VNA10_02035"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HVG36490.1"
                     /translation="MNPELDYVRAKVGDEILIVSKETFEQAKWENATVLETVKGRSLL
                     GLRYQGPFDELPASSEGVVGHRVIEWKDVTAAEGTGLVHIAPGCGAEDFALSKTEKLP
                     VLVPIDEMAHFVRGYGWLEGKDARDVAREIADDLEKRGRLFRAADYTHRYPDCWRCHE
                     EIVFRVDDEWFISMDELRPKLMAAAEKVTWLPTAAGRRMQNWLQNMGDWNISRKRYWG
                     LPLPFYTCANGHFFVLGSEEELRKLAKSGLDKLRELHRPWIDDVVVGCPQCGAESKRV
                     KEVGDCWLDAGVVPFSTLNYLHDRAYWETWFPADFVVEMVEQVRLWFYSALFFSVVLT
                     GKAPYRANASHAKVLAAPGEEFHKTGANMLDLG"
BASE COUNT          190 a          394 c          363 g          199 t
ORIGIN      
        1 gccgaggtcg agcatgttcg ccccggtctt gtggaactct tcgcccggcg ccgcgaggac
       61 cttcgcgtgc gaggcattcg cccggtacgg cgccttcccg gtgagcacga cactgaagaa
      121 gagcgccgag tagaaccaca ggcggacctg ctcgaccatc tcgacgacga agtcggccgg
      181 gaaccatgtc tcccagtacg cgcggtcgtg cagatagttg agcgtcgaga acggcacgac
      241 gccggcgtcg agccagcagt cgccgacctc tttgacacgc ttgctctcgg ctccgcactg
      301 ggggcaaccg accacgacat cgtcgatcca cggccggtgg agctcccgca gcttgtccag
      361 gccgctcttg gcgagcttcc gaagctcctc ctcgctgcca agcacgaaga agtggccgtt
      421 cgcgcacgta tagaaaggaa gaggcaggcc ccagtagcgc tttcggctga tgttccagtc
      481 gcccatgttc tgtagccagt tctgcatccg gcgtccggca gccgtgggca gccaggtcac
      541 cttctcggcc gccgccatga gcttcgggcg gagctcgtcc atcgagatga accattcgtc
      601 gtcgacgcgg aagacgatct cctcgtggca gcgccagcag tcgggatagc ggtgcgtgta
      661 atcggcggcg cggaagagcc ggccacgctt ttcgaggtcg tccgcgatct cgcgcgcgac
      721 gtcgcgcgcg tccttgccct cgagccagcc gtagcccctg acgaagtgcg ccatctcgtc
      781 gatcgggacg aggaccggaa gcttctccgt cttcgagagg gcgaagtcct cggcgccgca
      841 accgggcgcg atgtgcacga ggccggtccc ttccgcggcg gtcacatcct tccactcgat
      901 cacgcggtgg ccgaccacgc cctcactcga cgcgggcaat tcgtcgaacg gaccctggta
      961 gcggagaccg agaagtgagc ggcctttcac cgtctcgagc acggtcgcgt tctcccactt
     1021 cgcctgctcg aacgtctcct tggacacgat gaggatctcg tcccccacct tcgcgcggac
     1081 gtagtcgagc tccgggttca ccgcgagtga gacgttcgca ggcagcgtcc acggcgtcgt
     1141 cgtcca
//
LOCUS       DATLMA010000164         1370 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_678318, whole genome shotgun sequence.
ACCESSION   DATLMA010000164 DATLMA010000000
VERSION     DATLMA010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678318"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VNA10_02040"
     CDS             complement(<1..271)
                     /locus_tag="VNA10_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015284047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36491.1"
                     /translation="MAHGVDVEWVRAKPGEPAKPPEDLDAELRELRDEVRRLREQVAA
                     LAVESARPAPGDERLRTYVGRLDASLEGGVPKGSVIAITGPGGSMK"
     gene            452..883
                     /locus_tag="VNA10_02045"
     CDS             452..883
                     /locus_tag="VNA10_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015504071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6015 family protein"
                     /protein_id="HVG36492.1"
                     /translation="MAVKTKSERGPAGTLTVDDLTRAIKNSIDRTGMKEEEARAMAQH
                     VLNFFGYSERIIDNVLEPEDRDAFYMLEDSGILTTEREETTLYDGREWRIHYWMFRKE
                     RIAELVEAQKAKEEAEKLGSVYDDVPEDFWASRKERPEPPK"
     gene            complement(887..1297)
                     /locus_tag="VNA10_02050"
     CDS             complement(887..1297)
                     /locus_tag="VNA10_02050"
                     /inference="COORDINATES: protein motif:HMM:NF014002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF61 family protein"
                     /protein_id="HVG36493.1"
                     /translation="MAGPGPFDRWISFELGRLNAGLVVEKKSLSRLLAEPEPACRTRE
                     GDPHPFDRAALERYAAVLTREDADDLRLPLTLVASADSDSAYLTDELGAKALRAVEKF
                     DRAFLFRDGRMALPHSLAVDLVRRHGGVLQLAFG"
BASE COUNT          266 a          460 c          439 g          205 t
ORIGIN      
        1 tcttcatcga gccgcccggt ccggtgatcg cgatgacgct gcccttcggc accccgcctt
       61 cgagggacgc atcgaggcgg ccgacatagg tccggagacg ttcgtctccg ggcgccggtc
      121 gcgcggactc gacggccaac gcggccacct gctccctcag cctccggact tcgtcgcgca
      181 gttcccgcaa ctcggcgtcg agatcctccg gcggcttcgc cggctccccg ggcttcgccc
      241 gcacccactc cacatccaca ccgtgcgcca tcccgtagca taatgtgaac cgcgcgcgtt
      301 aaccttttgc agaggcccat cgcgcatcga ttcgactatc agctctgaga ggacggaccc
      361 catcgccggg atggtgagaa tcaacgaagg gacggcggcg cagaactctt aaatagcata
      421 gaccccccat aggagccgcc cgaggcgacc catggccgtg aagacgaagt cagagcgggg
      481 accggccggg acgctgaccg tcgacgacct cacgcgggcg atcaagaact cgatcgaccg
      541 gaccgggatg aaggaggaag aggcccgggc gatggcccag catgtcctca acttcttcgg
      601 ctactcggaa cggatcatcg acaacgtctt ggaaccggaa gaccgggacg cgttctacat
      661 gctcgaggat tccggcatcc tcacgacgga gagggaggag acgaccctct acgacggccg
      721 ggaatggcgg atccactact ggatgttccg aaaggaacgg atcgcggaac tcgtcgaggc
      781 gcaaaaggcc aaggaagagg ccgaaaagct ggggtccgtc tacgacgacg tccccgaaga
      841 cttctgggcc tcccgcaagg agcggcccga gccgccgaaa taggcctcag ccgaaggcga
      901 gctgcaagac gccgccgtgg cgtcgcacga ggtccaccgc gagcgaatgg ggtaaggcca
      961 tccggccgtc ccggaacagg aacgcccggt cgaacttctc gacggcccgc aaggccttcg
     1021 cccccagttc gtccgtgaga taggcgctgt ccgagtccgc ggaggcgacc agggtgaggg
     1081 gcagtcgaag gtcgtccgca tcctctcggg tgaggactgc cgcataccgc tcgagggcgg
     1141 cccggtcgaa tggatgcggg tccccttccc gcgtgcggca cgcaggctca ggttccgcga
     1201 ggagacggct caggctcttc ttctcgacga cgaggcccgc gttcagccgg ccgagttcga
     1261 acgagatcca gcgatcgaac ggaccggggc cggccatggc gtttccaatc ccgggccgcg
     1321 attaagcttt gcgaggcccg atagcatttt caacccctat cctgattccc
//
LOCUS       DATLMA010000165         2215 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_137778, whole genome shotgun sequence.
ACCESSION   DATLMA010000165 DATLMA010000000
VERSION     DATLMA010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137778"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1070
                     /locus_tag="VNA10_02055"
     CDS             <1..1070
                     /locus_tag="VNA10_02055"
                     /inference="COORDINATES: protein motif:HMM:NF025022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HVG36494.1"
                     /translation="KGQIAEFPALQLALGAIKGRIERLTVASIGTGGSKEEYPLVEIQ
                     GTPTSYQVKVLEDSPEYLDWLNSALLCAGFVEPIGLTAIARRLAEYEDIILGVDTNIL
                     YASILGEHLLDEFHRIHVRPYKESVNWILLVIPGVVMKELENAANMKKGNRLSHAGRR
                     GYRALQEITTLKGTEGYQGLSVLVVGPTNPEQLHLSPDGLTIVNADSMIRDQFKAFLR
                     GIDFRKGVFFLTMDKTNASLAAAEGLTALRIQYPRRLRKGEELTMPKEESVLLARLVY
                     ELAIEFGTVRLTWEDHGPHHLDLEGAWTWKSMEHWEAWQLLVSDVDQGIHKALNRYVD
                     GSFDPRRFVREWQKLAEILAE"
     gene            complement(1071..1760)
                     /locus_tag="VNA10_02060"
     CDS             complement(1071..1760)
                     /locus_tag="VNA10_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008081932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HVG36495.1"
                     /translation="MPEVSVIIPTMNEEASIGAVIDEVQTALVAWPSEILVVDTDSRD
                     RTRDIATAKGARVVPEPRRGYGRAYKTGFAAATGTFVATLDADLTYPAYRFPDFLTAL
                     AEDRADFVSGERLSSLSDGAMTGMHRVGNEILNFAFRSLYDSGVRDSQSGMWSFRRSI
                     LSRLRLVHDGMAFSEELKLEVIRAGLRFLEIPIEYRTRVGEKKIRSVSDATGNLIWLA
                     RKRVGWVPRSP"
     gene            complement(1801..>2215)
                     /locus_tag="VNA10_02065"
     CDS             complement(1801..>2215)
                     /locus_tag="VNA10_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008082556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HVG36496.1"
                     /translation="LERVELIVEGTDVTYPSSNLAYRKAVLDEIGGFDEWFVTAEDID
                     LNIRAVRAGHTIGFRADAIVYHRTRDSAFDFLRQALWNGAGRKQLTLKHGVLWSRYRP
                     GQMLRQKTTFWSLLRLGIALLGYVGYKLFGEPLPR"
BASE COUNT          427 a          693 c          725 g          370 t
ORIGIN      
        1 agaaagggca gatcgcggag ttcccggcgt tgcaactcgc cctcggcgcg atcaagggtc
       61 gaatcgagcg gttgaccgtg gcatcgatcg gcaccggggg ctcgaaggaa gaatatccac
      121 tcgtggagat ccaagggacg ccgacgtcgt atcaggtgaa ggtcctcgag gactcgccgg
      181 aatatctgga ctggctgaac tcggcgctcc tgtgcgcggg tttcgtcgag ccgatcggtc
      241 tcacggcgat cgcgcggcgc ctcgccgaat acgaggacat catcctcggg gtcgacacga
      301 acatcctata cgcatcgatc ctcggcgaac acctgctcga cgagttccac cggatccacg
      361 tacggccgta caaggagagc gtcaactgga tcctgctcgt gatcccgggc gtcgtgatga
      421 aggagctcga gaacgccgcg aacatgaaga aaggcaaccg gctctcgcac gccggccgcc
      481 gcgggtaccg cgccttgcag gagatcacga ccctgaaagg gacggaaggc taccagggac
      541 tcagcgtcct ggtcgtcggc ccgacgaatc cggagcagct gcacctctcg ccggacggcc
      601 tgacgatcgt gaacgccgac tcgatgattc gcgaccagtt caaggcgttc ctccgcggga
      661 ttgatttccg caaaggcgtc ttcttcctga cgatggacaa gacgaacgcg tcgctcgcgg
      721 ccgcggaagg tctcacggcg ttgcgcatcc aatacccgcg acggctgcgg aagggagagg
      781 aactcacgat gccgaaggag gagtcggtcc tcctcgcgcg cctcgtgtac gagctggcga
      841 tcgagttcgg aaccgtccgg ctgacctggg aggaccacgg gccccaccac ctcgatctgg
      901 aaggagcctg gacgtggaag tcgatggaac attgggaggc ttggcagctc ctcgtctccg
      961 acgtggatca gggcatccac aaagcattga accgctacgt ggacgggagc ttcgacccgc
     1021 gacgcttcgt gcgcgaatgg cagaaactcg ccgagatcct cgcggagtga tcagggcgac
     1081 cgcgggaccc agccgacccg tttccgtgcg agccagatca gatttcccgt cgcgtcgctc
     1141 acgctgcgaa tcttcttctc gcccacgcgc gtccgatatt cgatcgggat ctcgaggaac
     1201 cggagtcccg cgcggatcac ctcgagcttg agttcttcgg agaacgccat cccgtcgtgg
     1261 acgagccgca gacgggacaa gatcgaccgc cggaacgacc acatgccgga ctgggagtcg
     1321 cggaccccgg aatcgtacaa gctccggaac gcgaaattca ggatctcgtt gccgacccgg
     1381 tgcatgccgg tcatcgcgcc gtccgaaagg ctggaaaggc gttccccgga tacgaagtcg
     1441 gcgcggtcct cggcgagcgc cgtgaggaag tccggaaatc ggtatgcggg gtacgtcagg
     1501 tccgcgtcga gtgtggcgac gaacgtccca gtcgcggcgg cgaaaccggt cttgtaggcg
     1561 cgaccgtagc cgcggcgcgg ttcgggcacg acccgggccc ccttcgcggt cgcgatgtcc
     1621 cgagtccggt cgcgcgagtc cgtgtcgacg accaggattt cggatggcca ggcgacgagc
     1681 gcggtctgga cttcgtcaat cacggcgccg atcgaggcct cttcgttcat cgtcgggatg
     1741 atgacggaga cctcgggcat tagcgcgcca tgttgggtaa gtcccataag ggtttcgcgc
     1801 tcaacgaggc agcggctctc cgaagagctt gtatccgacg tacccgagga gagcgatccc
     1861 gagccgcaag agggaccaga acgtcgtctt ctgccgcaac atctgacccg gtcggtagcg
     1921 actccacaac acgccgtgct tcagcgtgag ttgcttacgg cccgcgccat tccacagcgc
     1981 ctgccggaga aagtcgaacg ccgagtcgcg cgtacggtgg taaacgatcg catccgcgcg
     2041 gaagccgatc gtgtggcccg cgcggaccgc gcggatgttc aggtcgatgt cttccgcggt
     2101 gacgaaccat tcgtcgaagc cgccgatctc atcgaggacg gccttgcggt aagcgagatt
     2161 ggacgacgga tacgtgacgt cggtcccttc gacgatgagt tccacccgct cgagt
//
LOCUS       DATLMA010000166         2032 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_799483, whole genome shotgun sequence.
ACCESSION   DATLMA010000166 DATLMA010000000
VERSION     DATLMA010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799483"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VNA10_02070"
     CDS             <1..509
                     /locus_tag="VNA10_02070"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG36497.1"
                     /translation="VIWATAEKLEQRELIGKLFYTLKELGVVLCTVEEHAKPGETIGE
                     DVLLPIYLSDGAIHLEYYPIGGAFNRTVKLLKMRGVHHGEGVYPYLFARGVGIVVRSS
                     PVKIPEEQSRSHIKTFDEAIKTAEAMKAPARVIERIRKMQKHWDYDYSPEEALQILFS
                     SYGLKRGG"
     gene            510..1298
                     /locus_tag="VNA10_02075"
     CDS             510..1298
                     /locus_tag="VNA10_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36498.1"
                     /translation="MPYAGQVDKTMGADTVGHLKHLLETELKRAREENNLDIAMFSGV
                     DGRIFSSSIPNQLDPREYRLLNLLKGNLAHICSQLSGQNMMMSVQQFEAGTIIISGVG
                     DRAFLVFLTTKPVEITKMQGVLANVVKTSIVVRHLYESRPITPEVLASYDEAVAGELK
                     RLTRILFVEKFGETKEFKKNKEIAQYLQSKLGALVGPGHLQEIVTMAYNEVGTTAPYM
                     TAGHWDRFLTIVVDRLRDLEGDAVAAKAEKEWRAHLKQVLSSFV"
     gene            1317..1937
                     /locus_tag="VNA10_02080"
     CDS             1317..1937
                     /locus_tag="VNA10_02080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36499.1"
                     /translation="MIDVALASLIEDMIEKAGADGVVEFWQRVGDNLASRMGKEAYLG
                     WTSFNVAVREARTAFSIEGDVTPLTDMAITDVDGDVVGYLYAMRQCCYVPTIFRTRFA
                     VGRMSPADKAVTDEYNENVHNIAVCNFCVFHERFREEIAKNISVSGNSLACFLLATRG
                     WSGETKISSKNVAQVNINEDHMRALLRNYECVYALVMRGARIKGER"
BASE COUNT          412 a          602 c          677 g          341 t
ORIGIN      
        1 cggtcatctg ggcgacggcg gagaagctcg agcagcgcga gttgatcggc aagctattct
       61 acacgctcaa ggaactcggc gtcgttctgt gcacggtgga ggaacatgcg aagcctggtg
      121 agacgatcgg tgaggatgtc ctcctgccga tctacctgtc cgacggtgcg atccatctcg
      181 agtactaccc gattggcggg gcgttcaacc ggacggtgaa actcctgaag atgcgcggtg
      241 tgcaccacgg cgaaggcgtg tacccgtacc tgttcgcccg cggcgtcggc atcgtggtcc
      301 ggtcgagtcc ggtgaagatt cccgaggagc agagccgcag ccacatcaag acgttcgatg
      361 aggcgatcaa gaccgcggag gcgatgaagg cgccggcgcg cgtgatcgag cgcatccgga
      421 agatgcagaa gcactgggac tacgactact cgccggaaga ggccctccag atcctgttca
      481 gttcgtacgg gctgaagcgg ggcggataga tgccctacgc gggccaagtc gacaagacga
      541 tgggggccga cacggtcggc cacctgaagc atctcctcga gacggagctg aagcgcgcac
      601 gggaggagaa caacctcgac atcgcgatgt tctccggcgt cgacggccgc atcttctcgt
      661 cgtcgatccc gaaccaactc gatccccgcg agtaccggtt gctgaatctg ctgaagggca
      721 acctggccca catctgcagc cagctgagcg ggcaaaacat gatgatgtcc gtccagcagt
      781 tcgaagccgg cacgatcatc atctcgggcg tcggggaccg tgccttcctg gtcttcctga
      841 cgacgaagcc cgtcgagatc acgaagatgc agggggtcct cgcgaacgtc gtcaagacat
      901 cgatcgtcgt ccgccacctc tacgagtccc ggccgatcac gccggaagtc ctcgcctcgt
      961 acgacgaagc cgtcgccggg gaactgaagc ggctcacgcg catcctgttc gtcgagaagt
     1021 tcggcgagac gaaggagttc aagaagaaca aggagattgc gcagtacctc cagtcgaagc
     1081 tgggcgccct cgtcgggccg ggtcacctcc aggagatcgt cacgatggcg tacaacgagg
     1141 tcggcacgac cgcgccgtac atgacggcgg ggcactggga ccgattcctg acgatcgtcg
     1201 tggaccggct gcgggatctc gaaggcgatg cggtcgccgc gaaggcggag aaggaatggc
     1261 gagcgcacct gaagcaggtg ctcagctcct ttgtgtgagg acgccggagg acgctcatga
     1321 tcgatgtcgc gctcgcctcg ctgatcgagg acatgatcga gaaggccggg gccgacggcg
     1381 tcgtcgagtt ctggcagcgg gttggggaca acctcgcgag ccgcatgggc aaagaggcgt
     1441 acctcggatg gacctcgttc aacgtcgccg tccgggaggc gcgcactgcc ttcagcatcg
     1501 aaggcgacgt aacgccgctc acggacatgg cgatcacgga cgtcgacggc gacgtggtcg
     1561 ggtatctgta cgcgatgcgt cagtgctgct acgtcccgac gatcttccgg acacgtttcg
     1621 cggtcgggcg gatgagtccg gcggacaagg ccgtgacgga cgagtacaac gagaacgtcc
     1681 acaacatcgc ggtctgcaat ttctgcgttt tccacgaacg gttccgggag gagatcgcga
     1741 agaacatctc cgtgtcgggg aactcgctcg cctgcttcct cctcgcgacc cgtgggtgga
     1801 gcggggagac gaagatctcc tcgaagaacg tggcccaggt gaacatcaac gaagaccaca
     1861 tgcgtgccct cttgcggaac tacgagtgcg tctacgccct ggtcatgcgc ggggctcgga
     1921 tcaaggggga acgctgagat ggcgtccgaa tctcggatgc cggagagcaa cccgttcgtt
     1981 gagatcgcga cgcatctgtt cctggaggac atcgccacaa aggtcggcat cg
//
LOCUS       DATLMA010000167         2012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_259269, whole genome shotgun sequence.
ACCESSION   DATLMA010000167 DATLMA010000000
VERSION     DATLMA010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259269"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..352
                     /locus_tag="VNA10_02085"
     CDS             47..352
                     /locus_tag="VNA10_02085"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HVG36500.1"
                     /translation="MATFVRVAKTSDVPPGAGRVVVVQGHPVALFNVEGRFYAVSNVC
                     LHRGGPIGEGMLDEAVVTCPNHGWEYDVRTGTNLANPTARLRSFEVRIDGEDVFVGA"
     gene            392..1624
                     /locus_tag="VNA10_02090"
     CDS             392..1624
                     /locus_tag="VNA10_02090"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HVG36501.1"
                     /translation="MALDFVWIGLTVLAVLAFLASVASLVQGIRLRGGVRRGVRLTLG
                     AFLPSIALILPVRGLDEGFDENVRALLSQDYPRYRILVVADDSSDPAAAQIETIARDF
                     PRVPITKVLADANPLGGKVNALRSALGHLGPEDEVVVFADSDIRPARDWLRQLVQPLA
                     DSTVGVATGFRWYVPPRPTFWSLVRAEWNAVSANVLFDPRRSFAWGGSCAVPAYRLNE
                     LRLADRWRGVLSDDLVLTQAVREAGLKIAYVPAALVPTYEGANRATCTEWCLRQMTMA
                     TLYLPVVRRYAIAAFSVFNGSILFGLACLALAAFRGAAYLIPAAVFFAPLPMSIAKAS
                     LRRRALFSGAPMVAAAWKVPAWRSAVAAMAVPWVMASGLLRTRNPTTIRWRGHTYDVS
                     DPRQVRLIEAPGKPERAP"
     gene            complement(1672..>2012)
                     /locus_tag="VNA10_02095"
     CDS             complement(1672..>2012)
                     /locus_tag="VNA10_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36502.1"
                     /translation="TANTFSDPQVLAMQAAAREPLVPITGVFLAFFLPPSIVAAILIA
                     LSVARVGLTPILLVAVLVVALLPPAVSMIRTLRQSERRNEILSELAKYQEHLRETAEA
                     TPTLPATEGS"
BASE COUNT          295 a          644 c          694 g          379 t
ORIGIN      
        1 aaaacctcgc aaacgttcat gcgacggtcg cggctggcta ggctcgatgg cgacgttcgt
       61 tcgggtcgcg aagacctccg acgttccacc gggagcgggt cgggtcgtcg tggtccaagg
      121 ccaccccgtc gccctcttca acgtcgaagg aaggttctac gcggtctcga acgtctgcct
      181 ccatcggggc ggcccgatcg gagaggggat gctcgatgaa gcggtcgtca cctgcccgaa
      241 ccacggatgg gaatacgacg tacggaccgg gacgaatctc gcgaacccga cggcccgcct
      301 tcggtcgttc gaggtccgaa tcgacggcga ggacgtgttc gtcggcgcgt gaccaccaag
      361 gtttattccg cgcacggagg ttcgcgccgc agtggcgctc gattttgttt ggatcggatt
      421 gacggtcctc gcggtcctgg cgttcctcgc gagcgttgct tccctggtgc aaggcatccg
      481 gctccggggc ggggtccggc gtggggtgcg cctcaccctt ggcgcgttcc tgccctccat
      541 cgccttgatc ctcccggttc gtgggctcga cgagggcttt gacgaaaacg tgcgggccct
      601 cctctcgcag gactatcctc ggtaccgaat cctggtcgtc gcggacgatt cctcggatcc
      661 tgccgcggcg caaatcgaga cgatcgctcg cgacttccct cgggtcccca tcacgaaggt
      721 cctcgccgac gcaaacccgc tcggtggcaa ggtgaatgca ctgcgatccg ctctcggtca
      781 tctgggtccc gaggacgagg tcgtggtctt cgccgattcg gatatccggc ctgcgcggga
      841 ctggttgcgg cagctcgtgc aaccgctcgc cgattcgacc gtcggcgtcg cgacgggctt
      901 ccgctggtac gtgccgccgc ggccgacgtt ctggtccctc gtccgcgcgg agtggaatgc
      961 ggtcagcgcg aacgtgctgt tcgatccgcg gcggtcgttc gcctggggcg gctcgtgtgc
     1021 ggttccagcc tatcgcttga acgagttgcg cctcgcggac cgatggcgag gcgtgctgag
     1081 tgacgacctc gtgctgacgc aagcggtgcg ggaagcgggc ctcaagatcg cgtacgttcc
     1141 cgcggccctc gtgccgacgt atgagggcgc gaaccgagcg acgtgcaccg aatggtgtct
     1201 ccgccagatg acgatggcca cgctctacct cccggtcgtc cgccgatacg cgatcgccgc
     1261 attctccgtg ttcaatggct cgattctgtt tggtcttgcg tgccttgccc tggcggcgtt
     1321 ccggggcgcc gcgtatctga ttcccgccgc ggtcttcttc gcgccgctgc ccatgtcgat
     1381 tgcgaaagcg tccctgcggc ggcgcgccct cttctccggc gccccgatgg tggccgcggc
     1441 gtggaaggtc cccgcgtggc gatccgccgt cgcggcgatg gcggtcccct gggtcatggc
     1501 ttcgggcctt ctgcggaccc gaaacccgac cacgattcgt tggagaggcc acacgtatga
     1561 tgtgagcgat ccgcgccaag tgcggctcat agaggcgccg ggcaaacctg aacgtgcccc
     1621 ctaaggtggc acggatgagt cgggtccgct ccgagttgcc cttgactaag gtcaacttcc
     1681 ttcggtcgct ggaagggtcg gagtggcctc cgccgtttcg cggagatgct cctggtactt
     1741 cgcgagttcc gagaggatct cgtttcgacg ttcgctctga cgaagcgtgc gaatcatgga
     1801 cacggcagga gggagcaacg cgacgacgag gaccgcgacg aggaggatcg gcgtgaggcc
     1861 gacgcgcgcg accgagagag cgatcaagat ggcggcgacg atggatggcg gcaggaagaa
     1921 cgcgaggaac acgccggtga tcgggacgag cggctctcgc gccgcggcct gcatggcgag
     1981 gacctgcggg tccgagaacg tgtttgcggt cg
//
LOCUS       DATLMA010000168         1016 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_678797, whole genome shotgun sequence.
ACCESSION   DATLMA010000168 DATLMA010000000
VERSION     DATLMA010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678797"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(259..408)
                     /locus_tag="VNA10_02100"
     CDS             complement(259..408)
                     /locus_tag="VNA10_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36503.1"
                     /translation="MTGPMIMRYEAHLHRLYIQTLHELEAVQTRRKGGTSPLARIDIT
                     GPPGG"
     gene            680..>1016
                     /locus_tag="VNA10_02105"
     CDS             680..>1016
                     /locus_tag="VNA10_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HVG36504.1"
                     /translation="MVRAIDVHVHPPDASGASLTSSEETQRYFRSAAPPKSADEMAEL
                     YVELDLFGVLLNIDAETATGRAPTPNDYYADIVKRYPKQFIAFGGVDPRKGDLALHET
                     RRCAEELGMK"
BASE COUNT          196 a          274 c          371 g          175 t
ORIGIN      
        1 agggggaaga gggacgggcg aagacgtagg aggcaagagg taagagggag gccggagagc
       61 cctcaccccc ggcccctctc ccgtgcgcgg gcgaggggag acgaaggggg atctgtggtg
      121 aaagttggcg agtgtcgcac cggaaaagcg ctacggccct tcggccccgg ctacgcctcc
      181 gctcaggaca tgcttcgatt cctcagcctt cgctgatctt ctttggtcct tcggttcctc
      241 aggatgaacg acattgagtt agcctcctgg cgggccggtg atgtcgatgc gggcgagagg
      301 ggacgtgccg cctttgcgac gggtctggac ggcttcgagc tcgtggaggg tctggatgta
      361 gagacggtgg aggtgggctt cgtagcgcat gatcatgggg ccggtcatct cgccggggat
      421 gaggcgagcg gcgatgtgta ccgacgttgc cgttccatga aattccagat agttgctgca
      481 ctctcccagt ggtgcggcga cggagaacca agaacctctg ggacgcggtc gatcgaaccg
      541 cgagacgggc gcgagttagc ggcagcggcg tcgtgggagc ggaggacaca cttcacgtac
      601 tgctatcatt tcctccgagc agtggatgca agataggaag acgatccgcc aaatgcggcc
      661 gtaagcgaag agtgatccga tggtgagagc gatcgacgtc catgtccacc cgccggatgc
      721 ctccggcgcc tcgctgacgt cgtcggagga gacgcagcgg tacttccggt cggcagcgcc
      781 tccgaagagc gcggatgaaa tggcggagtt gtatgtggag ctggatctgt tcggcgtgct
      841 gctgaacatc gacgccgaaa cagcgaccgg gcgagcaccg acgcccaacg actactacgc
      901 ggacatcgtg aagcgctacc cgaagcagtt catcgcgttc gggggcgtcg acccgaggaa
      961 gggtgatctc gcgctgcacg agacgcggcg ttgcgctgag gagctgggga tgaagg
//
LOCUS       DATLMA010000169         2248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_799957, whole genome shotgun sequence.
ACCESSION   DATLMA010000169 DATLMA010000000
VERSION     DATLMA010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799957"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /locus_tag="VNA10_02110"
     CDS             complement(<1..729)
                     /locus_tag="VNA10_02110"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HVG36505.1"
                     /translation="MDALAATRLAAGTAFLVVAAASDLRTRRVRDPVWIGLGTLGLVV
                     LAAQLVVESAPWPAWSFAGSAALLFYAVFFGRPLTEEDGFHARPIRIGVFLIAGAMWL
                     APLAFAGAVPASGSTPELASMPVMIVVYQGFYRFRVLHGGADAKLLMATTLLVPTYPN
                     ALPFPLLMPDPRVDSVLRTVFPFSLVVWVDAAIVSLAIPIGLFLFNALRGDLAIPQAF
                     LGYRARLDSFPTHAWLMEKITPTGE"
     gene            879..1436
                     /locus_tag="VNA10_02115"
     CDS             879..1436
                     /locus_tag="VNA10_02115"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG36506.1"
                     /translation="MMEPRRMKVKVCLVGEHAVGKTSLIKRYVLNEYDDRYIVTLGAK
                     VSKKELALNPKGGDAIQMDMTIWDIMGSKGFRELLREAYFHGAQGILAVADITRYDTL
                     EDLDSWVESVFRTVGEIPVAFAINKMDLKDQAAFGEEQVKQATEAFEAPYFFSSAKTG
                     ENVELVFRTLGETIAKTAAKSASQS"
     gene            1566..>2248
                     /locus_tag="VNA10_02120"
     CDS             1566..>2248
                     /locus_tag="VNA10_02120"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HVG36507.1"
                     /translation="MRVTRDLGLFDITMAALGAMVGAAIFLLVGAAYAVAGPLILLSL
                     AVAALIAALAGMAYAELASGRPDASGGAYVWVRSALPAPSGFLSGWLSWGGHIAASAL
                     SALGLGIFLVELLRPSVQSSFFGPNPLEVSLVALAVLGLSAVAHFARVHLPLRALGRL
                     TLGKILLIVIVAVLGAISIFQPGLPRGFAVGASVSSLELMLGAGVLFIAFQGFEVVAQ
                     LSDQVKHPE"
BASE COUNT          396 a          730 c          738 g          384 t
ORIGIN      
        1 ttctcccgtg ggcgtgattt tctccatgag ccacgcgtgg gtggggaatg aatcgagccg
       61 ggcacggtaa ccgaggaacg cctgcgggat tgcgaggtct cctcggagcg cgttgaaaag
      121 gaacagcccg atcgggatgg ccaacgacac gatcgccgcg tccacccaga cgaccaacga
      181 gaacgggaag acggtccgca ggaccgaatc gacccgcggg tccggcatga ggagcggaaa
      241 gggcagggca ttcggatagg ttgggaccag gagcgtggtc gccatcagga gtttggcatc
      301 cgcgccgccg tggaggacgc ggaatcggta gaacccttga tacacgacga tcatgacggg
      361 catcgatgcc aactcgggag tcgatccgga ggccggaacg gcccccgcga aggcgagcgg
      421 cgcgagccac atcgcccccg cgatgaggaa caccccgatc cgaatcggcc gggcgtggaa
      481 gccgtcctct tccgtcagtg gccggccgaa gaagaccgcg tagaagagaa gagccgccga
      541 gcccgcgaac gaccacgccg gccaaggcgc ggattccacc acgagttgcg cggcgaggac
      601 gacgaggccc aacgttccca ggccgatcca caccgggtcg cggacgcgtc gcgtccgaag
      661 gtcggacgcc gcggcgacga cgagaaaggc ggtgccggcc gcgagtcgcg tcgccgccaa
      721 cgcgtccaca cgtccgcatc ccagcgtcgt tatttcaagg gttgcgtgat ccgcatcata
      781 ggtcgcaaga cctgcgtttt tctcggtaac gactaaatag acccttgcga atagcgcaaa
      841 tcgtcgaagg attttctcga atccctccga ggaccgacat gatggagccg cggcgaatga
      901 aggtgaaagt ctgcctcgtc ggcgagcacg ccgtgggcaa gacctcgctg atcaagcgct
      961 acgtgttgaa cgaatacgac gatcgatata tcgtgacgct cggcgcgaaa gtctccaaga
     1021 aagaactcgc tctcaatccg aaaggcgggg acgcgatcca gatggacatg acgatctggg
     1081 acatcatggg ctcgaaggga ttccgcgagc tccttcgcga ggcgtacttt cacggggcgc
     1141 aggggatcct cgccgtcgcc gacatcaccc gatacgatac gcttgaggat ctcgactcgt
     1201 gggtcgagtc cgtgttccgg accgtcggcg aaatcccggt cgcgtttgcg atcaacaaga
     1261 tggacctgaa ggaccaagcg gcgttcggtg aggagcaggt gaaacaagcc acggaggcct
     1321 tcgaagctcc gtatttcttc agctccgcga agaccggcga gaacgtcgag ctcgtgttcc
     1381 ggacgctcgg cgaaacgatc gcgaagaccg ccgcgaaatc cgcgtcgcaa tcgtagtcgg
     1441 cccgcgcgtc ctcgaacctg ccgccgcgcg ttcaaccgtt ccggttcacc gccataggct
     1501 caagtagccg gcccattctc cgcccccccg tgtccggtgc cggacccgcg tcggcctccg
     1561 ttcgcgtgcg agtcacccgg gacctcggcc tgttcgacat cacgatggcg gcgctcggtg
     1621 cgatggtcgg cgccgcgatc ttcctcctgg tcggcgccgc gtatgcggtc gccgggccgc
     1681 tcatcctgtt aagcctcgcg gtcgccgcgc tcatcgcggc cctcgccggc atggcgtacg
     1741 ccgagctcgc atcgggccga cccgatgcct cggggggcgc ctatgtctgg gtgaggagcg
     1801 cgttgcccgc gccgagcggg ttcctgagcg gctggctctc gtggggcgga cacatcgccg
     1861 cctccgcgtt gagcgccctc ggcctcggga ttttcctcgt cgagctcctc cgtccctcgg
     1921 ttcaatcgtc gtttttcggg ccaaatccgc tggaggtcag cctcgtcgcg ctcgcggtcc
     1981 tcggactctc cgcggtcgcg cacttcgcgc gcgttcatct cccgctccgc gcgctcggcc
     2041 ggttgacgtt gggcaagatc ctactgatcg tcatcgtggc cgtcctcggg gcgatctcta
     2101 tcttccaacc gggtctgccg cggggattcg cggtcggagc gtcggtctct tcgctcgagt
     2161 tgatgctcgg ggcgggggtg ctcttcatcg cgttccaggg cttcgaggtc gtcgcgcaac
     2221 tgtccgacca agtgaagcac cccgagag
//
LOCUS       DATLMA010000170         3173 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_196298, whole genome shotgun sequence.
ACCESSION   DATLMA010000170 DATLMA010000000
VERSION     DATLMA010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196298"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VNA10_02125"
     CDS             complement(<1..786)
                     /locus_tag="VNA10_02125"
                     /inference="COORDINATES: protein motif:HMM:NF019872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylcobamide--CoM methyltransferase"
                     /protein_id="HVG36508.1"
                     /translation="MVRTTVVGNYPRVGDTFEEQSLRRAIARFDKGEIGADDLRGAEQ
                     DVVKAVLKEQNDAGIDVVTDGQISWYDSQSHIARGLASVEINGLARYFDTNTYYRQPV
                     VQGPVAWKEPILVDEWKFARANSKAAVKAVLTGPLTLASLALDKHYRNKRNLTLDLAN
                     ALGEEASVLVRAGAAHIQVDEPILTRHPEDLSLAVEGLERIRARKGSAALTLFTYFGE
                     VTKIFEELVEGPADVIGLDLVQGAATWPAISKHGSKKPLVLGLV"
     gene            complement(884..1723)
                     /locus_tag="VNA10_02130"
     CDS             complement(884..1723)
                     /locus_tag="VNA10_02130"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HVG36509.1"
                     /translation="MKSPKSEAKSGPKVGTIGGTVRPLLATIKQALVTMPGINRLIPG
                     GRKPVTHLYPYQKVELPLAFRGQHSIDWFKCIGCELCAKVCPNECIYFEFYEVEPTSE
                     YLHPSRAQLDEMKKIIRRPAVDVGHCLFCGNCMEYCPTDAWNFTQEFELADYAREDLY
                     YRADELRMPKENSDKEIVLINRIGEHPILEVDVCIGCRKCERECPTRCIDMLDGPNDR
                     KGKPIVIPEFDYTKCIGCQQCVDVCPVDCLHMEEIGYKDLEGFYHINLQGEVKLLEEQ
                     VEK"
     gene            complement(1698..2363)
                     /gene="nuoB"
                     /locus_tag="VNA10_02135"
     CDS             complement(1698..2363)
                     /gene="nuoB"
                     /locus_tag="VNA10_02135"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HVG36510.1"
                     /translation="MIQRAEQANIVGLRSKDFVQWVEANIDAPMKRGPGGAVLERLKG
                     GLVGEFFNWAKRNSTWPLHFGIMCCAIEMAATSDPRYDIERFGVIYRSSPRQCDVLLL
                     NGPISLKLRPAVRRLYEQMAEPKWVIAMGECTICGGPYYDSYSVVKGSYTFVPTDIFI
                     PGCPVRPEALIDGFLKLSAKIKAERTGWVRTKKGRLVSAREGQLMDMQKGEYTYEVPQ
                     VRS"
     gene            complement(2541..>3173)
                     /locus_tag="VNA10_02140"
     CDS             complement(2541..>3173)
                     /locus_tag="VNA10_02140"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HVG36511.1"
                     /translation="TAKAMLLIEFDEGDVEEIANGVVDRVASRYRLSRAAEVASDPAR
                     QSQLWRVRRSVFPTIIQRPGARKAWGFVEDPIVPRDRVPEFIGFLVDLARRHDTVAGI
                     YGHIGDGNTHYRPFFDPTNPDDFERMQTLREEFDQAVLDRFRGAPSGEHGIGRIRAET
                     LPRVWGDEVYGVMRRIKDALDPRGLLNPGVLFSTDPWWATWGGLESRLPM"
BASE COUNT          562 a         1024 c          969 g          618 t
ORIGIN      
        1 caccagaccg aggacgagtg gtttcttcga gccatgcttg gagatcgcgg gccacgtcgc
       61 ggccccctgg accaagtcga gaccgatcac gtcggcaggg ccttcgacga gttcctcgaa
      121 gatcttcgtg acctccccga agtaggtgaa caacgtcaat gccgccgaac ccttgcgggc
      181 gcgaatccgc tcgagtcctt ccacggccag cgagaggtct tccggatgcc gggtgagaat
      241 cggctcgtcc acctggatgt gcgccgcgcc cgctcggacc aacacggaag cttcctcgcc
      301 cagggcattc gcgaggtcga gggtcaggtt cctcttgttg cggtagtgct tgtccagcgc
      361 gagcgatgcg agggtgagcg gccccgtgag gaccgctttc acggcggctt tcgaattcgc
      421 ccgcgcgaac ttccattcgt ccacgaggat gggctccttc cacgcgacgg ggccttggac
      481 aacgggctga cggtagtacg tgttcgtgtc gaagtaccgc gcgaggccgt tgatctcgac
      541 ggacgcgagt ccgcgggcga tgtggctttg gctgtcgtac catgagatct ggccgtcggt
      601 gacgacatcg attccggcat cgttctgttc tttcaggacg gcctttacga cgtcctgttc
      661 cgcgcctcgc aggtcatcgg cgccaatctc acccttgtcg aatcgggcaa tcgcccgccg
      721 caacgattgc tcttcgaagg tgtcgccgac ccggggataa ttcccgacga ccgtggttcg
      781 gaccaagttt agagcctccc ggcggtaggt acgaaaacgg ataatgggaa tagtataaaa
      841 ggtctacaat tccgatacga atatcgcgga cgaagccgcc gggtcacttt tcgacctgct
      901 cctcgagcag cttcacttcg ccttggaggt tgatgtggta gaatccttcc agatccttgt
      961 agccgatctc ctccatgtgt agacagtcca ccggacagac gtcgacgcac tgctgacatc
     1021 caatgcactt cgtgtagtcg aactccggga tcacgatcgg cttgcccttc cgatcgttcg
     1081 ggccgtcgag catgtcgatg catcgggtcg gacactcgcg ctcgcacttg cggcatccga
     1141 tgcagacgtc cacctcgagg atcgggtgct ccccgatgcg gttgatcaac acgatctcct
     1201 tgtccgagtt ctccttcggc atccgcagct cgtccgcgcg gtaatacaga tcctcgcgcg
     1261 catagtcggc gagctcgaac tcctgcgtga agttccacgc gtccgtcggg cagtactcca
     1321 tgcagttccc gcagaacagg caatgcccga cgtccaccgc gggtcttcgg atgatcttct
     1381 tcatctcatc gagttgcgcc cgactcgggt gaagatactc ggaggtcggt tcgacctcgt
     1441 agaactcgaa gtagatgcac tcgtttggac agactttcgc gcacagttcg cagccgatgc
     1501 acttgaacca gtcgatgctg tgctgcccgc gaaacgcaag ggggagttcg accttctgat
     1561 atggatacag gtgggtgacg ggcttgcggc ccccggggat gagacggttg atccccggca
     1621 tcgtgaccaa ggcttgcttg atcgtggcga gcagcgggcg gacggtgccc ccgatcgtgc
     1681 cgaccttcgg gcccgattta gcttcggact tgggggactt cataggtgta ctcgcccttc
     1741 tgcatgtcca tcagctggcc ctcgcgcgcg ctgacgaggc ggcccttctt cgtgcgcacc
     1801 cagccggtcc gctccgcctt gatcttcgcg ctcagcttga ggaatccgtc gatcagcgcc
     1861 tccggacgga cagggcagcc ggggatgaag atgtccgtgg gcacgaacgt gtacgagccc
     1921 ttgaccaccg agtacgagtc gtagtacgga ccgccgcaga tcgtgcactc ccccatcgcg
     1981 atgacccatt tcggttccgc catctgctcg tacagccgac gcacggcggg gcggagcttc
     2041 agggagatcg ggccgttcag gaggaggaca tcgcattgcc gcggggacga acggtagatg
     2101 accccgaacc gctcgatgtc gtaccgcgga tccgaggtcg ccgccatctc gatcgcgcag
     2161 cacatgatcc cgaagtgcaa cggccaagtg gagttccgtt tcgcccagtt gaagaactcc
     2221 ccgacgaggc cgcccttcag tcgctcgagg acggccccgc cgggaccgcg tttcattggg
     2281 gcgtcgatgt tcgcctcgac ccactgtacg aagtccttcg agcgaaggcc gacgatgttc
     2341 gcctgttccg cgcgctggat catctgatca ggacccccga gatgcggccc gcgactcgct
     2401 cctgggacgc tcgaatatcg gggccgctct taacccttcc ttcgcggctt cgcatcctcg
     2461 attgcatccg ggcgacgggc cgtggtcgca gctcgatgaa acgaactccc cggtcggctt
     2521 aaaggttcgg gacgtacgca tcacatcggg aggcgagatt cgagtccgcc ccaagtggcc
     2581 caccacggat ccgtcgagaa caggacgccg gggttcagca gcccgcgagg atcgagtgcg
     2641 tccttgatcc gtcgcatcac gccgtacacc tcgtcgcccc acacacgcgg cagggtctcg
     2701 gcgcgaatcc gtccgatccc atgttcgccg gacggagctc cgcgaaaccg atcgagcacg
     2761 gcctgatcga actcctcccg caacgtctgc atgcgttcga aatcatcggg attcgtcggg
     2821 tcaaagaacg gacgatagtg cgtgttgcca tccccgatgt ggccgtagat tccagcgacg
     2881 gtgtcgtgac gccgggcgag atccaccagg aatccgatga actcggggac gcggtcccgc
     2941 gggacgatcg ggtcttccac gaagccccag gccttgcgcg cacccggtcg ctggatgatc
     3001 gtcgggaaga cagaccggcg gactcgccag agctgcgatt gacgcgccgg atccgacgcg
     3061 acctcggcgg ctcgactcaa tcggtagcga ctcgccacgc ggtccacgac cccgttcgcg
     3121 atctcctcga cgtcgccctc gtcgaactcg atgaggagca tcgccttcgc cgt
//
LOCUS       DATLMA010000171         1540 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_196481, whole genome shotgun sequence.
ACCESSION   DATLMA010000171 DATLMA010000000
VERSION     DATLMA010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196481"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VNA10_02145"
     CDS             complement(<1..485)
                     /locus_tag="VNA10_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36512.1"
                     /translation="MGYPAATARAFQYGLFIFTLTALLGLANATQLFGALDRNTLLTH
                     LHSGTLGWITMGVIGLSIWIFGGSGATLTRSVMLSAIATAAYVLAFWSGNFQARAIFG
                     TIELLVVLYWWWFAVSRGMAEGFGRLDIPKLSVIFGLTTLVIGSTLGVIVQIILGTGN
                     QL"
     gene            complement(519..1163)
                     /locus_tag="VNA10_02150"
     CDS             complement(519..1163)
                     /locus_tag="VNA10_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011957823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HVG36513.1"
                     /translation="MDLTWLGHACFRMRGREGVVLTDPPDPKSGHAISKTEAAIVTIS
                     HEHPGHSSLKSVGGEPVVLRGPGEYEVHEVLVTGIGTFHDDSKGAARGRNTVFAIRLD
                     DLVICHLGDLGHELPAGDLERLGDVDIVLVPISGGDVNLTAAKAAEVIHQLEPKVVVP
                     MSYEPDAKMDAHAPFDRLLHELGVKELTPVPKLSVTRSSLPENVQVVALDSRAR"
BASE COUNT          305 a          508 c          490 g          237 t
ORIGIN      
        1 agctgattgc cggttccaag gatgatctga acgatcaccc caagcgtgga gccgatgacg
       61 agggtcgtca gaccaaatat gacggagagc ttcgggatgt cgagacgacc gaagccttcc
      121 gccatgcccc gcgataccgc gaaccaccac cagtagagga cgacgagaag ctcgatcgtt
      181 ccgaagatcg cccgcgcttg gaagttcccg gaccagaacg cgagcacata cgccgcggtc
      241 gcgatcgcac tcagcatcac gctccgtgtg agcgtcgctc cggagccgcc gaagatccag
      301 atcgagagac cgatcacgcc catcgtgatc cacccgagcg tgcccgagtg gaggtgcgtc
      361 agcagcgtgt tgcgatcaag cgctccgaag agctgcgtcg cgttcgccaa gccgagaagc
      421 gccgtaagcg tgaagatgaa gagtccgtac tggaatgcgc gagcggtcgc cgctggatag
      481 cccataaacc tcagaacctc ccccttcgcg ggccgaggtt agcgcgcccg cgagtccagc
      541 gcgacgacct gcacgttctc tgggagtgaa ctccgcgtaa ccgaaagctt cgggacgggc
      601 gtgagctcct tcacgccgag ctcgtgcagg agccggtcga agggcgcatg ggcgtccatt
      661 ttcgcgtccg gctcgtacga catcgggacc acgaccttcg gctcgagctg gtggatgacc
      721 tcggcggcct tcgccgcggt gagattcaca tcgccgcccg agatcggcac gagcacgatg
      781 tccacgtcgc cgaggcgctc gagatcgccg gcgggaagct cgtggccgag atcgccgagg
      841 tggcagatga cgagatcgtc caaccggatc gcgaacacgg tatttcgccc tcgagcggcg
      901 cctttggaat cgtcgtggaa ggtgccgatg cccgtcacga gcacctcgtg gacctcgtac
      961 tcccccggcc cgcgcagcac cacgggctcg ccaccgaccg acttgagact cgaatggccg
     1021 ggatgctcgt gcgagatcgt cacgatggcg gcctcggtct tggagatggc gtggccagac
     1081 tttgggtcgg gcgggtccgt cagcacgacg ccctcgcgtc cgcgcatgcg aaaacaagcg
     1141 tggccgagcc aggtcaggtc catggaaccg gccgagaata cgcgaaacac ggcgacggcc
     1201 gagggggtag tccgaacgac acgacctcct ggccggagcg gcggaggctt ctctgaccga
     1261 caccgaccag gacgtcgtca aggcgtgtct tgccggtgac acggacgcct acgcgaccct
     1321 cgtcgagcga tacggaggcc gcgtcttcaa catcgcgctt cggatcaccg ccgacgcgga
     1381 cgcggcgaaa gactgcgcac aggaggcttt cattcgcgcc tatcgagcgc tccatcaata
     1441 cgaccccgcg cttccctttg gcccctggct ctaccggatc acgaccaacg cgagcctcaa
     1501 ctacatccag cgctggcatg cgcatcagac acaggtcgaa
//
LOCUS       DATLMA010000172         1067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_436535, whole genome shotgun sequence.
ACCESSION   DATLMA010000172 DATLMA010000000
VERSION     DATLMA010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436535"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VNA10_02155"
     CDS             complement(<1..901)
                     /locus_tag="VNA10_02155"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HVG36514.1"
                     /translation="MSGQRLLIIDDEAPIRDMLAFFFHKRGFEVLTASNYAEGSASVL
                     SSSPDLILCDIKMPDGNGLDLLKKIKSESPKTPVIMITAHTSTADAIDAMKAGAVDYI
                     AKPFNVEELGLIVDRALGEKELRDENVYLKQELAAKYTFANIIGKGSRMQEIFRTIER
                     IARVSSTVLLTGESGTGKELIARAIHYTSIRKDRKFVSINCGALPEPLLESELFGHER
                     GAFTGAIKDKRGLFTEADHGTLFLDEISETTLTMQVKLLRAIQERVIRKVGGNEEVTI
                     DVRIIAATNKDLQELVADGKFRED"
     gene            complement(898..1056)
                     /locus_tag="VNA10_02160"
     CDS             complement(898..1056)
                     /locus_tag="VNA10_02160"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG36515.1"
                     /translation="MAIVRRIVEDHGGAIDVESRPGEGTTMTVLLPRGLPGAQEVAAA
                     TAAAPGVA"
BASE COUNT          166 a          346 c          340 g          215 t
ORIGIN      
        1 ggtcttcccg gaattttccg tccgcgacga gctcctgcag gtccttgttg gtcgcggcga
       61 tgatacgcac gtcgatcgtg acttcctcgt tgccgccgac cttccggatg actctctcct
      121 ggatcgctcg caggagcttg acctgcatcg tcaaggtcgt ttccgagatc tcgtcgagga
      181 agagcgtccc atggtccgct tcggtgaaga ggccgcgctt gtctttgatg gcgccggtga
      241 acgcgccgcg ctcgtgaccg aagagctcgg actccagcag cggctccggc agcgcgccgc
      301 agttgatcga gacgaacttg cggtccttgc ggatcgacgt gtagtggata gcgcgcgcga
      361 tgagctcttt gccggtgccg ctctcgcccg tcaggagcac ggtcgaggag actctcgcga
      421 tccgctcgat cgttcgaaag atctcctgca tccgcgagcc cttcccgatg atgttcgcga
      481 aggtgtactt cgcggcgagc tcctgcttga gatagacgtt ctcgtcgcgg agctccttct
      541 ccccgagcgc gcggtcgaca atcaggccga gctcctccac gttgaaaggc ttcgcgatgt
      601 agtccaccgc gccggctttc atcgcgtcga tcgcgtcggc ggtcgaggtg tgcgccgtga
      661 tcatgatgac gggagtcttg ggcgactcgg acttgatctt cttcaaaagg tcgagaccgt
      721 tgccgtccgg catcttgatg tcgcagagga tcaggtccgg cgaggagcta aggaccgaag
      781 ccgaaccctc ggcgtagttg gacgcggtca gaacctcgaa gccccgcttg tggaagaaga
      841 aggcgagcat gtcccggatc ggggcctcgt cgtcgatgat gagaaggcgc tgcccgctca
      901 cgcgaccccc ggcgcggccg ccgtagccgc cgcgacctcc tgggcgcccg gcaggccgcg
      961 cggcagcaga accgtcatgg tcgtgccttc tcccggcctc gattccacgt cgatcgcccc
     1021 tccatggtct tctacgatcc ggcgcacgat ggccattccc aggccgg
//
LOCUS       DATLMA010000173         1052 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_860138, whole genome shotgun sequence.
ACCESSION   DATLMA010000173 DATLMA010000000
VERSION     DATLMA010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860138"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..858)
                     /locus_tag="VNA10_02165"
     CDS             complement(13..858)
                     /locus_tag="VNA10_02165"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HVG36516.1"
                     /translation="MPRSIWKGVMSFGMVAIPVRLYLATESSSKVSFNLLCPEHRSRI
                     KNKRYCVEGDHEVAWGDVVRGYEYEKGNYVELTDEDLEKLPLRSSKAIDITGFIKDEE
                     LPGALYYQSAYYLEPEKSAEKPYALLNKTLEKTGRVAIAKFALRDRERLVSVRPLDGT
                     LLMNTLHWPDEIRSTEDLDVPEGVKVSPAELKMAENLVGMMATEFEPSEYKDEYKQAV
                     LKLVEAKVEKREVIEAPEPEAETTVVDLMSALKASVEKAKKSGAKTKAASSASSSRTA
                     RKKAS"
BASE COUNT          167 a          352 c          320 g          213 t
ORIGIN      
        1 cgaggatagg tcctaggacg ccttcttccg cgcggtccgc gaagacgaag cggacgacgc
       61 agccttggtc ttcgccccgc tcttctttgc cttctcgacc gacgctttga gggccgacat
      121 gagatcgacg accgtggtct cggcctccgg ctcgggagcc tcgatgacct ctctcttttc
      181 gaccttcgcc tcgaccagct tcaggaccgc ctgcttgtac tcgtccttgt actcggacgg
      241 ctcgaactcg gtggccatca tgcccacgag gttctcggcc atcttgagct cggcgggcga
      301 gaccttcaca ccctcgggca cgtcgagatc ctccgtcgag cggatctcgt ccggccagtg
      361 cagcgtgttc atcaggagcg tgccgtcgag tggacgcacc gagaccaggc gctcgcggtc
      421 gcgcaaggcg aacttcgcga tggcgacccg tccggtcttc tcgagggtct tgttcaggag
      481 cgcgtagggc ttctcggccg acttctcggg ctcgaggtaa tacgccgatt ggtagtagag
      541 cgcgccgggg agctcctcat ccttgatgaa cccggtgatg tcgatggcct tgctcgaacg
      601 gaggggaagc ttttcgagat cctcgtccgt cagctcgacg tagtttccct tctcgtattc
      661 gtagccacgc acgacgtcgc cccacgcgac ctcgtggtca ccctcgacgc aatagcgctt
      721 gttcttgatg cggctccgat gctcggggca gaggaggttg aaggagacct tgctcgagct
      781 ctccgtcgcc aggtacaacc ggacagggat ggcgaccatc ccgaagctca tgacgccttt
      841 ccaaatcgat cgcggcatgc ccaatcacct cgtcgggccg cttccccttt ttcccgcgcg
      901 gccacgccgc gcgaatcata acggctccgt caagggagcg cacctggagc gccacccttg
      961 ccccaggaga cgatccggac gaggcgttcg agggttgcgg gatcgccgtg ccagtgctgg
     1021 cgcacgaccg cgccatcggt cgtacgcacg at
//
LOCUS       DATLMA010000174         1599 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_562116, whole genome shotgun sequence.
ACCESSION   DATLMA010000174 DATLMA010000000
VERSION     DATLMA010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_562116"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VNA10_02170"
     CDS             complement(<1..323)
                     /locus_tag="VNA10_02170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36517.1"
                     /translation="MIPSPQVEKVNRSASRWPRLIAIVSVAIFMTFVFSASRSFAATT
                     HDVYIGGVTAGAPLAPGGVVWFNGFSPGTIRITAGDTVTWHLVGGVHTVTSADTLSNG
                     SFTYDS"
     gene            complement(402..476)
                     /locus_tag="VNA10_02175"
     tRNA            complement(402..476)
                     /locus_tag="VNA10_02175"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(438..440),aa:Pro,seq:cgg)
     gene            635..805
                     /locus_tag="VNA10_02180"
     CDS             635..805
                     /locus_tag="VNA10_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36518.1"
                     /translation="MDQLQMEPRARKKKKSSKLEFDAAQVFGTSKDTEIQMDLDSARY
                     AAQKGEGGDRRA"
     gene            951..>1599
                     /locus_tag="VNA10_02185"
     CDS             951..>1599
                     /locus_tag="VNA10_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015492109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG36519.1"
                     /translation="MQFPLREKIAGEIALSDQPGKTMRKWREELRISQTELATHMRVS
                     PSVISDYEAGRRTSPGIKTIHRLVDALLEIDQRTGQKLTKRFQEYSDVIPSMRDWAVG
                     VRAADFLRKIDGKLLTQKLNTRRIVNGYTVIDSMKAITTLDASDYLQIYGSTSERALF
                     FTGVKYGRSPMIAIKAHPLKPAMVVYVQPENIDDLAVKLAELDNILLARTELDQGE"
BASE COUNT          351 a          488 c          478 g          282 t
ORIGIN      
        1 gaatcgtatg tgaaactgcc gttcgacagg gtatcggccg acgtgaccgt atggacgccg
       61 ccgacgagat gccacgtaac cgtgtctccg gccgtgattc gaatcgtccc cggcgagaag
      121 ccgttgaacc acaccacgcc gccgggtgcg agcggggctc ccgcggtgac cccgccgatg
      181 tacacgtcgt gcgtcgtcgc ggcaaaactc cgcgacgcgg agaagacgaa cgtcatgaaa
      241 atcgcgacgg acacaattgc gatcagtctc ggccagcgag atgcggatcg attcaccttc
      301 tccacctgcg gcgagggaat catgcctcct ggtatttaac gcccgagaga aatcagactg
      361 gcagaagaga gaggagcctc gccgacagcg ggttctaaga atgggtccgt ccggatttga
      421 accggagtct agtggtcccg aaccaccaag gatagaccaa gctaccccac ggacccgcgc
      481 gacgcgcggt acgcccgggg tctctataag tgttgcgcgg ggccgcgttc ggtgagcaag
      541 cgattcggat tcttcgtctc gtcggacctc tcttgttctg cgtccggata ctcagcggcg
      601 agacttgatt agcgaaccgt ccgatcaatc ggtgatggac cagctccaaa tggagccgcg
      661 ggctcggaag aagaaaaagt cttcaaagct cgaattcgac gccgcccaag tcttcgggac
      721 ctcgaaggac accgagattc agatggacct ggactcggcc cggtacgcgg cccagaaggg
      781 cgaaggcgga gatcgccgag cgtaggtctc gcctcgcgtt ccgtcgcgat tgcgacaccc
      841 gagccggagc attcgcatat ggtatcacga aagacgattt cgaccttgtt cgtcagccgc
      901 cgatagcacc ttcgacacgc ttatatagcg ctcaaattgt cgcgtactcc atgcagttcc
      961 cgctccgcga aaaaatcgcg ggcgagatcg ccctttccga ccagccgggc aagacgatgc
     1021 gcaagtggcg ggaggaattg cggatctcac agaccgagct cgcgactcac atgcgcgtct
     1081 cgccctccgt catttccgat tacgaggcgg gccgccgaac gtccccgggg atcaagacga
     1141 ttcatcggct cgtggatgcg ctcctcgaga ttgaccagag gaccgggcag aagctcacga
     1201 agcgattcca ggaatattcc gacgtcatcc catcgatgcg agactgggcc gtcggcgttc
     1261 gcgcggcgga cttcctccgg aagatcgatg gaaagttgct cacccaaaaa ctcaacaccc
     1321 gccgcatcgt gaacggatac acggtgatcg attcgatgaa ggcgatcacc acgttggacg
     1381 cgagcgacta cctgcagatc tacggctcga cgagcgaacg ggcccttttc ttcaccgggg
     1441 tgaagtacgg gcggtctccg atgatcgcga tcaaggccca tccgttgaaa cccgccatgg
     1501 tcgtgtacgt gcagccggag aacatcgacg atctcgccgt caagttggcc gagctcgaca
     1561 acatcctcct ggcgcgcacg gagctcgatc aaggagaac
//
LOCUS       DATLMA010000175         1360 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_377478, whole genome shotgun sequence.
ACCESSION   DATLMA010000175 DATLMA010000000
VERSION     DATLMA010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377478"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..360
                     /locus_tag="VNA10_02190"
     CDS             160..360
                     /locus_tag="VNA10_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36520.1"
                     /translation="MFSRKNIGAEPQKCEKCGSDKVFFVQHSHGNYPILDYVCPKCDL
                     GGDQGVPEWYMNPTGKDDAPED"
     gene            380..595
                     /locus_tag="VNA10_02195"
     CDS             380..595
                     /locus_tag="VNA10_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36521.1"
                     /translation="MTEVVIRAFRVSGYVPGPCPKCAKEERGLVMFEDYALGWECLQC
                     GEIGRADRVEWIEGRDPALADLKDEEE"
     gene            complement(596..1186)
                     /locus_tag="VNA10_02200"
     CDS             complement(596..1186)
                     /locus_tag="VNA10_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36522.1"
                     /translation="MTSTKVAEAKAALERGEFDAAFRLSAEAQIELPEDPEARELYAV
                     IHLARAIRLSDHAREARRLDLLHREIDYDVEFQDSPEVAREYDEATAAIDDVLRVAPD
                     HWKARMLKAALVFRRDRESGRPQALEILNALAEADPTNKQIPFTIRKIERPCVRCGDT
                     GFCPHCKGRGQRRVLRMERKCERCYGRGICPACGVL"
BASE COUNT          255 a          433 c          429 g          243 t
ORIGIN      
        1 ccgcatgccg ccggaggatg tcgagtccct cgacctcttt gccctctttg aaccggaacc
       61 gcgagaatcg gaggaacatg tgcggtcgag ggctcctctt tcccaaagac cttccggaga
      121 ccggcaagtt tatgttcgcc cgccggcgtg gcgcgcataa tgttcagtcg gaagaacatc
      181 ggggcggagc ctcagaagtg cgagaagtgc ggctccgaca aggtcttctt cgtccagcac
      241 tcccacggaa actacccaat cctcgattac gtgtgtccga agtgcgacct cggcggggac
      301 cagggtgtgc ccgagtggta catgaacccg accggcaaag acgacgcccc cgaggactga
      361 gcctcgtagg gatccgtcca tgaccgaggt cgtcatccga gcgttccggg tcagcggcta
      421 tgtgcccggg ccgtgcccga aatgcgccaa ggaggagcga ggcctcgtga tgttcgaaga
      481 ctatgcgctc gggtgggagt gcctccagtg cggggagatc ggccgagcgg accgcgtcga
      541 gtggatcgag gggcgcgacc cggccctcgc ggacctgaaa gacgaagagg aatgatcaca
      601 gcacgccaca cgccgggcag atgccgcggc cataacaccg ttcgcatttt cgttccatgc
      661 gcaacacacg tcgctgaccg cgacccttgc aatgaggaca gaatcccgta tcgccgcagc
      721 ggacgcatgg acgctcgatc ttccggatcg tgaacggaat ctgcttgttt gtcggatcgg
      781 cttcggccag agcgttcagg atttcgagcg cttgcggccg tcccgactcg cgatcgcgac
      841 gaaagacgag ggcggccttc agcatgcgag ccttccagtg atccggggcg acccggagga
      901 catcgtcgat tgcggccgtg gcttcgtcgt actcgcgcgc gacttccgga ctgtcctgga
      961 actcgacgtc gtaatcgatc tcacggtgca gcaagtccaa gcgacgcgct tcgcgtgcgt
     1021 ggtccgaaag gcgaatcgcc ctcgcgagat ggatgaccgc atacaattcg cgggcctccg
     1081 gatcctcggg cagctcgatt tgcgcttccg cggagagacg gaacgcggca tcgaactcgc
     1141 cccgctcgag ggccgccttc gcctccgcca ccttcgtcga ggtcacgttt cccaggtatc
     1201 aaaggcctgg ttgccttaag gctgcctccg gtcggccgag gacgaacctt catctctcgt
     1261 gagacgttcg gccgccgaaa tgcaggacgc ggacgcgttc gatgacgtcg cattcctcgg
     1321 cacagcccgc agcgcaaagc gcgatcccta tcgattgtcc
//
LOCUS       DATLMA010000176         2090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_620108, whole genome shotgun sequence.
ACCESSION   DATLMA010000176 DATLMA010000000
VERSION     DATLMA010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620108"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VNA10_02205"
     CDS             complement(<1..350)
                     /locus_tag="VNA10_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36523.1"
                     /translation="MTSKDNFEFAHEHRHEVAWMSQNTNTLPVHPSILEAIRASVDDR
                     EFNLYPRKAGIFGLSDVIKEDLGLDEADMILTNGGIEGEYIATRALLKPGDEALSTDP
                     SFLPIHDQVAMTGAR"
     gene            462..983
                     /locus_tag="VNA10_02210"
     CDS             462..983
                     /locus_tag="VNA10_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018205019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HVG36524.1"
                     /translation="MTLGGKKVVVLTEDGYEDLELWVPYYRMLEEGADVVLAGHEKRT
                     YASKHTYPCEVDTTVASLNAKEFDAVIIPGGVAGPDRLRRHREVLDFVRTMDRDGKIV
                     AAICHAAWVPISAGIVKGRRMTSYASVKDDCINAGATWVDKECVVDGTFITSRHPDDL
                     PAFCRAIVSMMSK"
     gene            993..1622
                     /locus_tag="VNA10_02215"
     CDS             993..1622
                     /locus_tag="VNA10_02215"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HVG36525.1"
                     /translation="MVRAPADWRKILRHAEVLVRRRDLRSLYILLPALAWRSVTARNR
                     VVALFARLGPIALPSLLEKLEDARAATTRAGAAESLGRIGDSRAVSRLIRALGDSAMT
                     VRRASMVALLRLEAMNAVPRIARLLGDESGGVRVMAAVVLGGFEDPRAVPALVRALGD
                     NQWYVRQASATALGQIGDRRAVPALETATHDPRKSVARAAAAALRALRA"
     gene            1738..1810
                     /locus_tag="VNA10_02220"
     tRNA            1738..1810
                     /locus_tag="VNA10_02220"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1771..1773,aa:Val,seq:gac)
     gene            1871..2038
                     /locus_tag="VNA10_02225"
     CDS             1871..2038
                     /locus_tag="VNA10_02225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36526.1"
                     /translation="MKRPNWKAIGFLAFIALGAVSAALGCPFFRNPQNYMSAGGFVGY
                     VQHLISVHRKA"
BASE COUNT          340 a          667 c          709 g          374 t
ORIGIN      
        1 cgcgctcccg tcatcgcgac ctggtcgtgg atcggcagga acgagggatc cgtcgaaagg
       61 gcctcgtccc caggcttcag gagagcgcgg gtcgcgatgt attcgccctc gatcccgccg
      121 ttcgtcagga tcatgtcggc ctcgtccagg cccaggtcct ctttgatcac gtcggagagt
      181 ccgaagatcc ccgccttccg ggggtacagg ttgaactcgc ggtcgtcgac gctcgcgcgg
      241 atcgcttcga ggatcgatgg atgcacgggg agggtgttcg tgttctgcga catccacgcg
      301 acctcgtgtc ggtgctcgtg ggcgaactcg aagttgtcct tcgacgtcat gtcgcgtcct
      361 cggcggcgcg tcgaagccgt gacgcctcat atcgcttgcg gtgggccggt tccgagcgag
      421 tcgccgcaac gaatttggcc ccggttcgcg atggaccgtc catgacgctt ggcgggaaga
      481 aagtcgtcgt gctgacggag gacggatacg aggacctcga gctctgggtg ccctactacc
      541 gaatgctcga ggaaggcgcg gacgtcgtcc tcgcgggaca cgagaagcgg acctacgcct
      601 cgaagcacac gtatccgtgt gaggtggaca ccaccgtggc ctccctcaac gcgaaagaat
      661 tcgacgcggt catcatcccg ggcggcgtcg ccggacccga tcgacttcga cggcacaggg
      721 aagtcctcga cttcgtccgc acgatggacc gggacggcaa gatcgtcgcc gcgatctgcc
      781 acgcggcctg ggtgccgatc agcgcaggga tcgtgaaagg tcgtcgcatg acgtcgtacg
      841 cgagcgtgaa ggacgactgc atcaacgccg gcgcgacttg ggtggacaag gaatgcgtcg
      901 tcgacgggac gttcatcacg tcccgccatc cggatgattt gcctgccttc tgccgtgcga
      961 tcgtctcgat gatgtccaag tgagcgggcc cgatggtccg cgcgccggct gattggcgaa
     1021 aaatcctgcg tcacgcggag gtcctcgttc gacgacggga cctccggagc ctgtacatcc
     1081 tgcttcccgc gctagcttgg cggtccgtga cggcgaggaa tcgggtcgtt gccctctttg
     1141 cccgattggg tccgatcgcg cttccgtccc tcctcgagaa attggaagac gcgcgcgccg
     1201 caacgacgcg ggccggggct gccgaatcgc tcggccggat cggggattct cgtgccgtct
     1261 cgcgacttat ccgagcgttg ggggactccg cgatgaccgt gcggcgggct tcgatggtcg
     1321 cgctcctgcg gctcgaagcg atgaacgccg tgccaagaat cgcgcgcctc ctgggggacg
     1381 aatccggtgg agtccgcgtg atggcggcgg tcgtcctcgg aggattcgag gaccctcgag
     1441 ccgttcctgc gctcgtccgt gcgctcggcg acaatcaatg gtacgtgcgt caggcgtccg
     1501 cgaccgcgct tggacagatc ggggaccgac gggccgtacc cgcgctcgag acggcaacgc
     1561 atgatccgcg gaaatcagtt gcgcgagcag ccgccgccgc gctgcgagcg ttgcgagcat
     1621 gacagatccc gaccgctcca gggcggaccg gcagacggag cggctcgcgg tcctgtcgcc
     1681 gcccctgcac tgaaccggag aaagtcttaa gcgagccgcg gggttaggcc gcggcgcggg
     1741 ctcgtggtct agtggctatg acatcgcctt gacatggcga aggtcaccgg ttcgaatccg
     1801 gtcgagccca ctgcccttcc gaaatcgaaa cccgcaaaag atatctgccc gcgcgagctc
     1861 cgggatgccg atgaagcgtc cgaactggaa agcgatcggg ttcctcgcgt tcatcgcgct
     1921 gggggccgtg tccgctgcgc tgggatgccc gttcttccgg aacccgcaga actacatgtc
     1981 cgcggggggc ttcgtcggat acgtccagca cctgatctcg gtgcatcgca aggcctgaca
     2041 cagcgaatcc cgggctcgcc gtggcctcgg actctccggg gcggtccgat
//
LOCUS       DATLMA010000177         1320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_800720, whole genome shotgun sequence.
ACCESSION   DATLMA010000177 DATLMA010000000
VERSION     DATLMA010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800720"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1310
                     /locus_tag="VNA10_02230"
     CDS             <1..1310
                     /locus_tag="VNA10_02230"
                     /inference="COORDINATES: protein motif:HMM:NF039585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5915 domain-containing protein"
                     /protein_id="HVG36527.1"
                     /translation="VKEFVNRAFPNGGKSIQTASFGGTTVLGARGPQAFLAVTLRGKE
                     PAILPLYVMQVLKDIHDAYGPRLEGWSGDPAELPGIREAVRKILFATDVEGVSLGPLE
                     DSPVSKIPMLVKRGLLAGEGQTDFLTWARTTIEREGYGQGMVVLRQISDATVGPTEEI
                     SRQIRQTIIASKEAGTLQISDEQVNAYVEFLRLTLEAAFQAKHRAGIERYWPISRIAI
                     KTAEQIGHDAVSAFRKVIVGQIGAKELDLVAPNDMWRGMKIDVQVHMASVSAAYRLWA
                     RKIEILLRSQDAWKIKAGLDRGEYSVGIEGQKVRIDPSMVSFVESIPEYVVEEPFEGG
                     VVYLDTRMSKELIAEGYAKEIANLVREARKDMRLADDRIVEIELVAGKPFRAMLQPWK
                     DMILRDSNALDLQFVAEPDANAYVIEAGLGEETFLLGVRAAEM"
BASE COUNT          260 a          403 c          444 g          213 t
ORIGIN      
        1 aggtgaagga gttcgtgaac cgggcgttcc cgaatggcgg gaagagcatc cagacggcct
       61 cgttcggcgg cacgacggtc ctcggggccc ggggtcccca ggcgttcctg gccgtcacgt
      121 tgcgcgggaa ggaaccggcg atcctgccgc tctacgtcat gcaggtcctc aaggacatcc
      181 atgacgcata cggcccgcgg ctcgaggggt ggagcggcga ccccgccgag ctgcccggca
      241 tccgcgaggc cgtccggaag atcctgttcg cgacggacgt cgaaggcgta tcgctcggcc
      301 cgctcgaaga cagccccgtc agcaagatcc cgatgctcgt gaagcggggc ctgctcgcgg
      361 gagaggggca gaccgacttc ttgacgtggg ctcggaccac gatcgagcgc gaaggctacg
      421 gacagggcat ggtcgtcctc cgtcagatct cggatgccac cgtgggcccg accgaggaga
      481 tctcccgcca gatccgccag acgatcatcg cgtcgaagga ggccggcacc ctccagatct
      541 cggatgaaca ggtgaacgcg tacgtcgaat tcctgcggct cacgctcgag gccgccttcc
      601 aggcgaagca tcgcgcggga atcgaacgat actggccgat ctcacgcatc gcgatcaaga
      661 ccgcggaaca gatcgggcac gatgctgtga gcgccttccg caaggtcatc gtcgggcaga
      721 tcggggcgaa ggagctcgac ctcgtcgcgc ccaacgacat gtggcgcggc atgaagatcg
      781 atgtccaggt ccacatggcc tcggtcagcg ccgcgtacag actctgggcc cgcaagatcg
      841 agatcctgct gcgctcgcag gatgcttgga agatcaaggc gggcctcgac cgcggcgagt
      901 actccgtcgg aatcgaaggc cagaaagtcc ggattgatcc gtcgatggtg tcgttcgtgg
      961 agtcgatccc ggagtacgtc gtcgaagagc cgttcgaggg cggggtcgtc tacctcgata
     1021 cacggatgtc gaaggaactg atcgcggaag gttacgccaa ggaaatcgcg aacctggtcc
     1081 gtgaggcgcg gaaggacatg cgtctcgccg atgaccggat tgtcgaaatc gaacttgtcg
     1141 caggcaaacc gttccgcgcc atgctgcaac cgtggaagga catgatcttg cgcgattcga
     1201 acgccctcga cctacaattc gtggctgaac cggacgcgaa cgcgtacgtc atcgaggcgg
     1261 gcctcggtga agagacgttc cttctcggcg tccgagccgc tgagatgtag gaagcgtacg
//
LOCUS       DATLMA010000178         3002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_17459, whole genome shotgun sequence.
ACCESSION   DATLMA010000178 DATLMA010000000
VERSION     DATLMA010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17459"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VNA10_02235"
     CDS             <1..406
                     /locus_tag="VNA10_02235"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36528.1"
                     /translation="ALFLGDRDFRSFTSEPPTGPFALNRLDVARDDDAIVIDVRAGSF
                     RRGMVRRIVAAMLAFARGDVARKRIQDALKGTRHDFGVAPPGPLFLMDVSYDFPFRVV
                     RKGKALDEWGGLRVDATLRLRWLGSLESVATK"
     gene            587..>3002
                     /locus_tag="VNA10_02240"
     CDS             587..>3002
                     /locus_tag="VNA10_02240"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG36529.1"
                     /translation="MITKLLRSKHVHAVLIVYVMVAASLLFVLQAHPAAAVAGSKDTL
                     TVGLQNDMVNPNYFDTATNSVWKQYHVEFNFEGLFSHDPDFTTFNVLSDPARGGSACP
                     AGSLPSGPGYCIDSTGFAVTVYIHNNATFTNGQMLTADDVVFTFQTLPWSTYQLGIFN
                     AIWSDTQKYPLWNATSGCSGAKCVSHIGVTKIDATTVKFHLSKTYALFFYDTMEIPII
                     PSGLWKNHMGTWPQLNLSAPANRLTDTFDNSIDTTYNGLDAATGSGPFMLTSWTHNAD
                     ATIDVSPSYWGRGQTHTWRSDAYPFYPKALRHIRAVIYGSLDVISLALQRGDIDTLVW
                     PLTPGFLSQVQSNPAINIAQVTDSGFFYVSFNMRERPWGQAPWSLTLRKAFSQAIDKD
                     YIVNTLMGGFGAKGTVPIAISNPLYVNTTATPPGFDINAGHAALLAAGFHDCNGDGFL
                     EAPDCSPVKATILTPPKDYDPIRADAGIMISKNLKTMGLDIDAAPTSFDTIVAKAFSA
                     PVSFDVYVLGFSLGDFPETYICDFFCSSRDVNLNTGGSNSAGYSNPQVDSLITSALTD
                     TDTASRVQKIKDVEGILTDQLPWNVLYYRKNLNAYRNDAWVGWANYPNGGGIYNPWSI
                     PHIVPAGTVTPPTGGSLTVALSMPDQVYARQVAPFDILVSQGNAPASGAAVTLTLTYG
                     SQTIPQSGTTDAGGRVHFTWTVPVIQGNVIASVVATKGTLSGTNGKVMEVTVAPPAPI
                     STLSLSTPTPVIAPSGTATITARLVDATGAGLVGYTVNIDTTLVFGAISPASGVTDAT
                     GRTAFTY"
BASE COUNT          576 a          929 c          909 g          588 t
ORIGIN      
        1 cgctctgttc ctgggcgacc gcgactttcg gagcttcacc tcggagccgc caaccggtcc
       61 gttcgccctc aaccggctgg acgtcgcgcg ggacgatgac gcgatcgtga tcgatgtgcg
      121 cgcgggaagt tttcgccgcg gcatggtgcg ccggatcgtc gcggccatgc tcgccttcgc
      181 gcggggcgac gtcgcacgga aaaggatcca ggacgctctc aagggaacgc gtcacgattt
      241 cggtgtcgcg cctccgggac ctctattctt gatggacgtc tcatacgatt tcccgtttcg
      301 cgttgtccga aaggggaagg cgctggatga gtggggcggg ttgcgggtcg atgcaacgct
      361 ccgcttgcgg tggctgggtt cactcgagtc cgttgcgacc aagtaaggtt ctccgtcggt
      421 tttcgaggac tcgcacggcg gtgcgattcg actttcggag gctccgaggg ttcgagaaac
      481 gtaccaagaa atggttcgaa attcgagcta aaacacggtt cggacaaacg ttcttatagg
      541 ctccgccctg ttccgattta acttccggtt gagggaggag tctcgtttga ttacaaagct
      601 tctgcgctcg aaacacgtgc acgcggtctt gatcgtctac gtgatggtcg ccgcgagtct
      661 gttgttcgtg ctgcaggccc acccggccgc ggccgttgcc gggtcgaagg ataccttgac
      721 ggtgggcctt cagaacgaca tggtgaaccc gaactatttc gatactgcca cgaatagcgt
      781 ctggaaacag tatcacgtgg agttcaactt cgaagggttg ttctcccatg accctgattt
      841 tacgacgttt aacgtgttgt cagacccggc cagaggtggg tcggcttgtc cggccgggag
      901 tctgccgagc ggcccaggat attgcattga ttcaacgggc ttcgctgtga ctgtttacat
      961 tcacaacaat gcgacgttca cgaacggcca gatgctgacg gccgacgacg tcgtgttcac
     1021 gttccagacg ctgccctggt ccacgtacca gcttgggatc ttcaatgcga tctggtccga
     1081 cacgcagaag tatccgctct ggaacgcgac cagtggttgc agcggcgcga agtgcgtgtc
     1141 ccacatcggc gtcacgaaga tcgacgcaac gaccgtgaaa ttccatctct ctaagacata
     1201 tgccctgttc ttctacgata cgatggagat tccgatcatc ccatcgggcc tgtggaagaa
     1261 ccacatgggc acctggcccc agctgaacct gtctgctccg gcgaaccgct tgacggacac
     1321 gttcgacaac tcgatcgata cgacgtataa cggactcgac gcggcgaccg gctccggacc
     1381 cttcatgcta acctcgtgga cgcacaacgc ggacgccacg atcgacgtct cgccgagcta
     1441 ctggggaagg ggacagaccc acacctggag gagcgacgcg tatccgttct acccgaaggc
     1501 cctgcgccac atccgcgcgg tgatctacgg aagtctcgac gtcatcagct tggcgcttca
     1561 gcggggcgac attgacaccc tggtctggcc cctcacgccg ggcttcctga gccaggttca
     1621 gtccaacccg gcgattaaca tcgcgcaggt caccgattcc gggttcttct acgtctcgtt
     1681 caacatgcgc gagcggccgt ggggacaggc cccgtggagc ctgaccctcc ggaaggcgtt
     1741 ctcgcaggcg atcgacaagg attacatcgt gaacacgctc atgggtggat tcggcgccaa
     1801 gggaacggtc ccgatcgcga tttcgaatcc gctgtacgtg aacacgaccg cgaccccgcc
     1861 aggctttgac atcaatgcgg gtcacgcggc cttgctcgcc gcaggattcc atgactgcaa
     1921 cggcgatggg ttcctcgagg caccggactg ctcgcccgtg aaggcgacga tcctcactcc
     1981 tccgaaggac tacgatccga tccgcgcaga cgccggcatc atgatttcca agaacctgaa
     2041 gacgatgggc ttggacatcg atgcggcccc gacgagcttc gacacgatcg tggcgaaggc
     2101 gttctcggcc ccggtctcgt tcgacgtcta cgtcctaggc ttctcgttgg gcgacttccc
     2161 ggagacgtac atctgcgact tcttctgctc gagtcgagac gtgaacctca acacgggcgg
     2221 atcaaactcc gcaggctaca gcaacccgca ggtcgacagc ctgatcacca gcgcgttgac
     2281 cgatacggac actgcgagcc gcgtccagaa gatcaaggac gtggaaggga tcttgacgga
     2341 ccagctgccg tggaacgtcc tctactaccg caagaacctg aacgcgtacc ggaacgacgc
     2401 atgggtcggc tgggcgaact acccgaacgg cggcggcatc tacaacccgt ggtcgattcc
     2461 tcacatcgtc ccggcgggaa ccgtaacgcc cccgacgggt ggctcgttga cggtcgcgct
     2521 ctcgatgcct gaccaggtgt acgcgcgtca ggtcgcaccc ttcgacatcc tcgtgtcgca
     2581 ggggaacgcc ccggcgagcg gcgctgcggt cacgttgacc ttgacgtacg gttcccagac
     2641 cattcctcaa agcgggacca cggacgccgg cggtcgggtt cacttcacct ggaccgtgcc
     2701 tgtcatccag ggtaacgtga ttgcttcggt cgtggcgacg aagggcactt tgagtggaac
     2761 gaacgggaag gtgatggaag tcaccgttgc tccgcctgca ccgatatcga cgctaagcct
     2821 gagcacgccg acaccggtga tcgccccgtc agggacggcc accattacgg cgcgcctcgt
     2881 cgacgcaacg ggtgccggac ttgtgggcta cacggtcaac attgacacga cgctggtgtt
     2941 cggggccatc tcaccggcct cgggcgtcac agacgcgacc gggaggacgg ccttcacgta
     3001 ca
//
LOCUS       DATLMA010000179         2168 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_378041, whole genome shotgun sequence.
ACCESSION   DATLMA010000179 DATLMA010000000
VERSION     DATLMA010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378041"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VNA10_02245"
     CDS             complement(<1..220)
                     /locus_tag="VNA10_02245"
                     /inference="COORDINATES: protein motif:HMM:NF014693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit E
                     family protein"
                     /protein_id="HVG36530.1"
                     /translation="MQLPEELQSLQRFHGHLGVYVTLGLRMGVIGKRRFGHYKGLRAR
                     VESQPEPPMRCVLDGIQFSSGCTMGKGNI"
     gene            571..>2168
                     /locus_tag="VNA10_02250"
     CDS             571..>2168
                     /locus_tag="VNA10_02250"
                     /inference="COORDINATES: protein motif:HMM:NF012704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minichromosome maintenance protein MCM"
                     /protein_id="HVG36531.1"
                     /translation="MTIPDAAPPPSRGKDVLVEFPQDELIAKWEEFFEEMGYLSKIIA
                     VADRYPESRSLEASFLDLNRFDTDMAIYLLRHPLNVLSAGEEAIRRLVPPGEEAPQIH
                     LRINGLPRDRRIQIRDLRAKHLGQYISVEGLVRKSTEVRPKVVGALFQCLRCGTIIKE
                     EQDGQTFREPLECYEEQGGCKRSASATKFKLLTETSLYLDTQKIEVQEAPEGLRGGEE
                     PQRLTAYVEDDLTGRITPGQRVILNGVLRSVQRGRPGQRSTLFDIFVDVNSVAMERVE
                     FEEIEVTEEDAHRIREIGSSPDIFRLITASIAPSIYGMHVEKEALALQLFGGVAKVMP
                     DGRRIRGDIHLILVGDPGTGKSELLSYMIRLSPRGIYATGKAASAAGLTAAAVRDEFG
                     EGRWTLEAGALVLADLGLAAIDEIEKMNPQDRSAIHEAMEQQRISVAKAGITAVLQSR
                     CAILAAANPKFGRFDEHKYISEQIDLPPALLSRFDIIFSIIDRPQADRDRELAEHILK
                     GHKVGEIRRRREAGFAVQEAMALE"
BASE COUNT          423 a          672 c          709 g          364 t
ORIGIN      
        1 cgatgtttcc tttgcccatc gtgcacccgc tcgagaactg gatcccgtcg aggacgcagc
       61 gcatcggtgg ctcgggctgg ctctccacgc gcgcacgaag gcccttgtag tgtccgaacc
      121 ggcgcttccc gatcacgccc atccggaggc ccaacgtcac atagaccccg aggtgtccgt
      181 ggaaccgttg gagtgactgg agttcttcgg gaagctgcat gggcgatgga tggcgacacg
      241 tccgcaataa ctttcgtccg gcacgcgcac tttcggccac ctctccccgt tccccctttc
      301 aagtactcgt cctatccaag aacccgtgag aagccatggg ccccctcccg gtcgatccag
      361 aagagttggt cgtgtccctg cgaagcgtcg cggacggatg tcgagaatgc ggagcgctcc
      421 tccagcacgt tagcggttgc gttcgatgtg ccgaatgcgg gtattcgaaa tgcggatgaa
      481 cgccaacggc acgtgtccct tccagtggaa acggtctgag ctaaactcgc gcgtgaagag
      541 tggcccagtg gaaggaggac tcaaagagat atgaccattc ccgatgctgc gccgcctccg
      601 agtcggggga aggatgtgct cgtcgagttt ccgcaagatg agctgatcgc gaagtgggag
      661 gagttcttcg aggagatggg ctacctctcg aagatcatcg cggtggccga ccgctacccg
      721 gagtcgcgga gcctcgaggc gtcgttcctc gacctgaatc gcttcgacac agacatggcg
      781 atctatctcc tgcgacaccc gctcaacgtc ctgagcgcgg gggaggaggc gatccgtcgg
      841 ctggtgccgc ccggggaaga ggctccccaa attcatctcc ggatcaatgg ccttccgcgg
      901 gaccgccgga tccagattcg ggatctgcgg gcgaagcatc tcgggcaata catctccgtc
      961 gaagggctcg tccgaaagag cacggaggtc cgccccaagg tcgtcggggc gttgttccag
     1021 tgcctccggt gcgggacgat catcaaggaa gagcaagacg ggcagacgtt ccgagagccg
     1081 ctcgagtgct acgaggagca aggcggatgc aaacggtccg cgagcgcgac gaagttcaaa
     1141 ctcctgacgg agacatcgtt gtacctggac acgcagaaga tcgaggtcca ggaggcgccg
     1201 gaggggctgc gcggcgggga ggagccgcag cgcctgaccg cctacgtgga agacgatctg
     1261 accggccgga tcacaccggg acaacgggtg atcctgaatg gagtccttcg aagcgtgcaa
     1321 cggggacggc cgggacagcg ctccaccctg ttcgatattt tcgtcgacgt caactcggtc
     1381 gcgatggaac gggtcgagtt tgaagagatc gaggtcacgg aggaagatgc gcaccggatc
     1441 cgggagatcg gatcgagccc cgacattttc cgcctgatca ctgcatcgat cgcgccctcg
     1501 atctacggga tgcacgtgga gaaggaagcc ctcgccctcc agttgttcgg cggcgtcgcg
     1561 aaggtcatgc ccgacggccg ccggatccgc ggggatatcc acctgattct cgtgggcgat
     1621 ccagggacgg gcaagagcga gctcctgtcc tacatgattc ggctctcgcc gcgcgggatc
     1681 tacgcgaccg gcaaggccgc ctcggcggca ggtctgacgg cggccgcggt ccgagacgaa
     1741 ttcggcgagg gacgctggac gctcgaggcc ggagccctcg tcctcgcgga tctcgggctc
     1801 gccgccatcg acgaaatcga gaagatgaat ccgcaagacc ggtcggcgat ccacgaagcg
     1861 atggagcaac agcggatcag cgtcgcgaag gcgggcatca ccgcggtcct ccaatcgcga
     1921 tgcgcgatcc tcgcggcggc gaaccccaag ttcggtcgat tcgacgagca caagtacatc
     1981 tccgagcaaa tcgacctgcc gcccgcgctc ctcagccgct tcgacatcat tttctcgatc
     2041 atcgatcgcc cgcaggcgga tcgcgatcgc gagctcgcgg aacacatcct caagggccac
     2101 aaggtcggcg agatccgtcg gcggcgcgag gcgggcttcg ccgtccaaga ggcgatggcc
     2161 ctcgagga
//
LOCUS       DATLMA010000180         2710 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_378088, whole genome shotgun sequence.
ACCESSION   DATLMA010000180 DATLMA010000000
VERSION     DATLMA010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378088"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..845
                     /locus_tag="VNA10_02255"
     CDS             228..845
                     /locus_tag="VNA10_02255"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HVG36532.1"
                     /translation="MNPIIFRKGIGRFRVSEASLERLRKFLLPLELAEAELKAKPAAA
                     VMIILRDGPHGLEVLLGERTKREGDPWSGQVGLPGGRHRAEDPTMLATATRETREEVG
                     IDLENRAEILGHMPPRAPGNKPEVLVVPFVGLATERLEATAGPEMAAVFWVPLADLPA
                     NQGRATVTTILGELNVPSFTYDSRLIWGFTYRILEELLVFVGLSA"
     gene            complement(835..1392)
                     /locus_tag="VNA10_02260"
     CDS             complement(835..1392)
                     /locus_tag="VNA10_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36533.1"
                     /translation="MSGYRTRETRSAAREFAIVSLAGLASFLFLNHQNLYLREPFALA
                     NAPIEAYFLATIVIYLFLRMLIIAAEMRPTRSRRGEIRCPECGQRLDTLTVAGREAHH
                     RIELTPKPSEREIVSAVALRKAVDAAHFSARTSRAVSRDDVATSARDLENVSSRDLVA
                     AIDDPDLLERLRHSPNPPRDPRLKR"
     gene            1556..2287
                     /locus_tag="VNA10_02265"
     CDS             1556..2287
                     /locus_tag="VNA10_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36534.1"
                     /translation="MANAMRPRTLSIIFGAFFALVGYFAWTFAAGLPPPGWFDAAITQ
                     WIYTTYMLVAAIFLVGLGGLALSIRRSFARQIRELEGRLQRGTSNPGYNYNALPPPLP
                     DTTTGRDHVDRDIDELLESLSEVEASAARDARAMEIEPGGIPDVPTFEATDREVAVRR
                     TRLIQRQRLLGRFIIGPAAASAFILGVSGMMLPGSGPNGFAQGQYVLNTALILGISYS
                     WIGIGAYVAATIAALVSRAGGKRRK"
     gene            2396..2629
                     /locus_tag="VNA10_02270"
     CDS             2396..2629
                     /locus_tag="VNA10_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36535.1"
                     /translation="MITTVVTVTSTFLAGSFGAAAVAALILFLIMRELTSAHAEESGS
                     TKSKILSHTLLVPISPLLVVFAFIVVVKVLEVL"
BASE COUNT          466 a          868 c          906 g          470 t
ORIGIN      
        1 cggccacggg tccgagaact cggcgcagaa cgtccgggtg tcgtatcgcg tcgcggggat
       61 cgagcctgag ttcatcaccg tcgggtcggg gctcatcgcc ccggggatcg cgctggtcgg
      121 cctcgggctg tggatgcgag agcggcggcg caagcgggcc gccaacccgg cgtgaacgcg
      181 gagctcccaa acctggacac gcgcatcccg agacgctcgt cccctggatg aatcccatta
      241 tattccggaa gggcataggc cgcttccggg tgtccgaagc ctccctcgaa cgcctgcgga
      301 agttcctgct gcccctcgaa ctcgccgaag cggaactgaa ggcgaaaccc gccgccgcgg
      361 tgatgatcat cctgcgcgac ggccctcacg gcctcgaggt cctcctgggc gagcggacga
      421 aacgcgaagg cgacccctgg tccgggcagg tgggcctccc gggcggacgg catcgggcgg
      481 aggacccgac gatgctcgcg acggcgaccc gcgagacgag agaggaagtc ggcatcgatc
      541 tcgagaatcg cgccgagatc ctcggacaca tgcctccgcg ggcgcccggt aacaaaccgg
      601 aggtccttgt cgttcctttt gtggggctgg cgacggagcg attggaagcc accgccgggc
      661 ccgagatggc cgccgtgttc tgggtccccc tcgccgacct gccggcaaat caagggaggg
      721 cgacggtcac gacgatcctc ggggagttga acgtcccctc gttcacctac gatagccggc
      781 tcatctgggg attcacgtac cggatcctcg aagagctgct cgtcttcgtc gggctcagcg
      841 cttgaggcgc ggatcccgcg gcggattcgg gctgtgccgg aggcgctcga gcaggtccgg
      901 gtcgtcgatc gcggccacca ggtcgcggct cgacacgttc tccaggtcgc gcgccgaggt
      961 tgcgacgtcg tctcgagaaa cggccctgga cgtgcgggcc gagaaatgcg cggcgtcgac
     1021 ggctttgcgg agggccaccg cggagacgat ctctcgttcg gagggcttcg gcgtgagctc
     1081 gatccggtgg tgggcctcgc gtcccgcgac ggtcaaggtg tccagacgct gtccgcactc
     1141 cgggcatcgg atctcgcccc ggcgggagcg ggtcgggcgc atctccgccg cgatgatcag
     1201 catccgcaag aacagataga tcacgatggt cgcgaggaag tacgcctcga tcggggcgtt
     1261 cgccagggcg aacggctccc tcaagtagag gttctggtgg ttgaggaaca ggaacgaagc
     1321 gagtccggcc aggctgacga tggcgaattc ccgcgctgcc gaccgtgtct cgcgcgtccg
     1381 ataaccgctc aacggatccc tccgtccggg ccgactccga aggaatccgg ccctcctcgg
     1441 gaggacgcac gacccggggc gggatatacc ttttggacaa cgggcgagcg gatatcaaaa
     1501 atgagaagga ggggatgaag tatatccgac tccccggtag gagtggtgga gtcggatggc
     1561 gaatgcgatg agaccgagga cgctctcgat cattttcggc gccttcttcg cgctcgtcgg
     1621 atatttcgcc tggacgttcg cggccggtct acctccgccc ggttggttcg atgcggccat
     1681 cacgcagtgg atttacacga cgtacatgct cgtcgcggcc atcttcctcg tcgggctggg
     1741 cgggcttgcc ctcagcatcc gccgttcgtt cgcgcgacag atccgcgagc tcgagggacg
     1801 gctgcagcga ggcacttcga acccgggcta caactacaac gcgttgccgc cgccgcttcc
     1861 ggacacgaca acgggccgag accatgtcga tcgggacatc gacgagttgc tcgaaagcct
     1921 cagcgaggtc gaagcgagtg cggctcgcga cgcccgggcg atggagattg agccgggagg
     1981 catcccggat gtcccgacgt tcgaggcgac ggaccgggag gtcgcggttc gccgcacgcg
     2041 attgatccaa cgtcagagac tcctcggccg attcatcatc ggacccgcgg cggcctcggc
     2101 gttcatcctc ggcgtatcgg gcatgatgct ccccggctca ggcccgaatg ggttcgcgca
     2161 gggccaatac gtgttgaaca cggcgctcat cctgggcatc agctacagct ggatcggcat
     2221 cggcgcgtac gtcgccgcga ccatcgcggc gctcgtgagt cgcgccggcg gcaagcggag
     2281 gaaataggga cccgattaca attctcacga ttgatgttcg aaacgaacac tcgtcgggga
     2341 tgtatttata tagaccaacc ttccatcgac cttattggac agaagggagc atcacatgat
     2401 tacaactgtc gtcaccgtca cgtcgacgtt cctcgcgggg agcttcggcg ccgcggcggt
     2461 cgccgccctc attctgttcc tgatcatgcg tgagctgacg agcgcccacg cggaggaatc
     2521 gggcagtacg aagtcgaaga tcctgtccca cacgctcctc gtgccgatca gcccgctcct
     2581 cgtcgtcttc gcgttcatcg tcgtggtgaa ggtcctcgaa gtcctctagt cggattcgcc
     2641 tccgaccggt ccgtcccgcg cgatctttct caggatcgta ccgggtccga gatcatcgtg
     2701 ccctcgaggg
//
LOCUS       DATLMA010000181         1821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_562873, whole genome shotgun sequence.
ACCESSION   DATLMA010000181 DATLMA010000000
VERSION     DATLMA010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_562873"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1821)
                     /locus_tag="VNA10_02275"
     CDS             complement(<1..>1821)
                     /locus_tag="VNA10_02275"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HVG36536.1"
                     /translation="FFVNTRDTAEFLSSRMTAWYQDPKIGVHHGSLSKEVRVQMEDEF
                     KSGGLRALVCTSSLELGIDVGTADFVLQYNSPREVSRLVQRIGRSGHGVGEVSDGVIL
                     ATHEDDVAEACAIARRGLAEEIEDLVVRKDNRSVLANQLVALAVSERFASLDEAYETV
                     RRSWPFRELKRADFDEVVAQLAGLRILWSRDGRLGRSSNSLPYFFENISMIPDVKTYR
                     VIDLSSRRAIGTLDEWFVAENAKLGESFIMRGSAWRFVDFKEDHLLVEPVREIGDVPS
                     WVGEDIPVPFDVAQEVGRIRRERDLSAYPVNEHGASTFLGYLASVGDAPLATDTRITI
                     ESARDVLIVNACFGSKVNETLAQLISSLISARFGQSVGVQTDPYRIVLEVPRSVNPQQ
                     VIEILRPEDPDALEPLLRVILKNSAFLRWAFVYVAKKFGALRRDVDWESVSIPRLLKT
                     FENTPLFEEVLDKVFWERMDIPRTVEVLRRIQSGQIEIAVTRMTPIGRAGLEGGRLLV
                     TPSRADHATLLAVKARLEKETATFLCLNCKMSWREIVRDLPAKIRCPRCEAVMVAVIA
                     PYERDKIAKLDFEGKDKESRSKAKRLFTNASLVMAHGRKAV"
BASE COUNT          309 a          616 c          580 g          316 t
ORIGIN      
        1 accgccttcc tcccgtgcgc catcacgagg ctcgcgttcg tgaacaatcg cttcgccttc
       61 gagcgactct ccttgtcctt cccttcgaag tcgagcttcg cgatcttgtc cctctcgtac
      121 ggggcgatga cggcgaccat cacggcctcg caccgcgggc accggatctt cgcgggaagg
      181 tctcgaacga tctcccgcca cgacatcttg cagttcaggc agaggaacgt cgcggtctcc
      241 ttctccaggc gggctttcac cgccaagagg gtggcgtggt ccgccctcga cggcgtcacg
      301 aggagccgac cgccttcgag gccggctcgg ccgatcggcg tcatgcgcgt gacggcgatc
      361 tcgatctggc ccgactggat ccgccgtagc acctcgacgg tcctcgggat gtccattcgc
      421 tcccagaaga ctttgtcgag gacctcttcg aacagggggg tgttctcgaa cgtcttcaag
      481 agccgcggga tcgagacgct ttcccagtcc acatcgcgtc gcagggcgcc gaacttcttc
      541 gcgacgtaca cgaacgccca ccgcaggaac gccgagttct tcaggatcac gcgcaacaac
      601 ggctcgagcg catccgggtc ctccgggcga aggatctcga tgacctgctg cgggttcacg
      661 gaccgtggga cctcgaggac gatccggtac gggtccgtct ggacgccgac gctctgcccg
      721 aaccgcgcgc tgatgaggga cgagatgagt tgcgcgaggg tctcgttcac tttcgatccg
      781 aagcacgcgt tcacgatcag gacatcccgc gcggattcga tcgtgatgcg ggtgtccgtc
      841 gcgagcggcg cgtcgcccac ggatgcgagg tatccgagga acgtggaggc cccgtgttcg
      901 ttgaccggat acgccgagag atcgcgctcc ctccggatcc ggccgacctc ctgggcgacg
      961 tcgaacggga ccgggatgtc ttcgccgacc cacgacggca catcgccgat ctcgcgcacc
     1021 ggttcgacga gcaaatggtc ttctttgaaa tcgacgaacc gccacgcgga gccgcgcatg
     1081 atgaagctct ccccgagctt ggcgttctcg gcgacgaacc actcgtccaa ggtgccgatc
     1141 gcgcgccgcg acgacaggtc gatcacccgg tacgtcttca cgtccgggat catcgagatg
     1201 ttctcgaaga agtacgggag ggagttggaa ctccgaccga gccgcccatc ccgggaccag
     1261 aggatccgga ggcccgcgag ctgggcgacg acctcgtcga agtccgcccg cttcagctcc
     1321 cggaacggcc agctccgacg cacggtctcg taggcctcat cgagcgaggc gaaacgttcg
     1381 gacacggcga gggcgacgag ctggttcgcg aggaccgacc ggttgtcttt ccggacgacg
     1441 agatcctcga tctcctccgc gaggccccga cgggcgatcg cgcacgcctc cgcgacgtcg
     1501 tcctcgtggg tcgccaggat cacgccgtcg gagacttcgc cgaccccgtg gccggatcgt
     1561 ccgatccgct ggacgagtcg cgagacctcc cgcggggagt tgtactgcag gacgaagtcc
     1621 gcggtcccca cgtcgatgcc gagttccagg gacgacgtgc aaacgagcgc ccggaggcct
     1681 ccggacttga actcgtcctc catctggacg cgcacttctt tcgataggct gccgtggtgc
     1741 acgccgatct tcggatcctg gtaccaggcc gtcatgcggg aggagaggaa ctccgccgtg
     1801 tcgcgggtgt tcacgaagaa c
//
LOCUS       DATLMA010000182         1021 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_562925, whole genome shotgun sequence.
ACCESSION   DATLMA010000182 DATLMA010000000
VERSION     DATLMA010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_562925"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1021
                     /gene="prf1"
                     /locus_tag="VNA10_02280"
     CDS             <1..>1021
                     /gene="prf1"
                     /locus_tag="VNA10_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor aRF-1"
                     /protein_id="HVG36537.1"
                     /translation="RGTELVSVYIPPGRPISDVTNYLRAELSQSSNIKSASTRKHVTQ
                     AIESATQRLRSYRMPPANGLVVFTGHKQIGADQTEMVAFVLEPPEPVASFLYRCDSKF
                     YTAPLHEMLAEKDVYGLVVIDWSEATLGMLRGKRIEVIKNLQSQVPSKHRMGGQSARR
                     FERGHDIAVHEWYKKIGELMTEAFLSLPELKGIIIGGPGYSKEEFATGDYLHHELKKK
                     VLPTFLDTGYTDEYGLRELVEKSREILSGLDLMREKSLVQRLMEEIRKEDGGLAAYGE
                     DQVRHALQLGAVETLLVSEGLRKSRLQLRCANGDWEGEKTVAEDGELPTCPKDGGTLV
                     VVENRD"
BASE COUNT          209 a          307 c          351 g          154 t
ORIGIN      
        1 cgcggaacgg aactggtcag cgtctacatc ccgccgggcc gacccatctc ggacgtgacg
       61 aactacctcc gggccgagct gtcgcagtcg tcgaacatca agagcgcgag cactcgaaag
      121 cacgtgacgc aggcgatcga gtccgcgacc cagcggctgc ggtcgtaccg gatgccgccg
      181 gccaacgggc tcgtcgtctt cacgggccac aagcagatcg gggcggacca gacggaaatg
      241 gtcgcgttcg tcctcgaacc accggagccg gtcgcgtcgt tcctctatcg gtgcgactcg
      301 aaattctaca ccgcgccgct ccacgagatg ctcgccgaga aggacgtcta cggactcgtc
      361 gtgatcgact ggagcgaggc gacgctcgga atgttgcggg ggaagcggat cgaggtcatc
      421 aagaatctcc agtcccaggt gccctcgaag catcggatgg ggggtcagag cgcccgacgg
      481 ttcgagcggg gccacgacat cgcggtccac gagtggtaca agaagatcgg ggagctgatg
      541 accgaggcgt tcctgagcct gccggagctg aaagggatca tcatcggcgg tccgggctac
      601 tcgaaggaag agttcgcgac cggcgattat ctccatcacg agctgaagaa aaaggtcctg
      661 ccgacgttcc tggacaccgg ttacacggac gagtacggcc tgcgagagct cgtcgagaag
      721 tcgcgggaga tcctgagcgg cctggacctg atgcgcgaga aatcgctcgt ccaacggctc
      781 atggaagaga tccgcaagga ggacggcggc ttggcggcgt acggcgagga ccaggtgcgt
      841 cacgcgctcc aactcggcgc ggtcgaaacg ctcctcgtct ccgagggtct ccggaagtcg
      901 cggctccagc tgcgctgcgc gaacggagac tgggaaggcg agaagacggt cgcggaggac
      961 ggtgaattgc cgacctgtcc gaaggacggt ggcacgctcg tcgtcgtcga aaaccgcgac
     1021 t
//
LOCUS       DATLMA010000183         1588 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_680218, whole genome shotgun sequence.
ACCESSION   DATLMA010000183 DATLMA010000000
VERSION     DATLMA010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680218"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="VNA10_02285"
     CDS             <1..806
                     /locus_tag="VNA10_02285"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HVG36538.1"
                     /translation="SDTIIRSPRGEVGFASNVGRVRPVDEDSILAVELRMAFLSEPRT
                     RLLLMVADGMGGHNRGEVASRIAIQTVARTLLPLLTSEEDIPRATYYRGLGTAVAHAN
                     QAIFAEAERHPECQGMGTTLSLAVADGRSLHVANAGDSRVYIVNEREIFQVTRDHSLV
                     QEMVDRGELLPEEAKHHPRKNVITMALGVYEEVTPDIGCLTMEPGDTVLLCCDGLINH
                     VEDEDIHRVVVETSDPQRACEILVALANKGGGTDNISVIIARAPPLSTT"
     gene            886..1533
                     /locus_tag="VNA10_02290"
     CDS             886..1533
                     /locus_tag="VNA10_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36539.1"
                     /translation="MKRTYFLVAIASLQILLGSITLIGAAQPVRMTENVVVLQGNYYL
                     FEFGILGTGRLSGNLSELQGLSFTLFVFDDAGYASFRDGSNSVAPLYQQSGTRIVFAM
                     NLTGSGQYHVVAVDVPQRRKLQIQLDFVVLGLKTWETIVALIVLVGGLALVGATLMLS
                     VWSWRRARAAPAAPAPSADPTSDPFPDPPLEPVPDPSSDPQGAAPDPPDDNTRIY"
BASE COUNT          293 a          510 c          479 g          306 t
ORIGIN      
        1 tgtccgatac gatcatccgc tccccccgtg gggaagtggg gttcgcctcg aacgtgggga
       61 gggtccggcc ggtcgatgag gatagcatcc tcgcggtcga gctgcggatg gcgttcctgt
      121 ccgaacctcg aacccgattg ctcctgatgg tcgcagacgg catgggagga cacaatcgcg
      181 gagaggtggc gagccggatt gcgatccaga ccgtcgcacg cacgcttctc ccgctcttga
      241 cgagcgaaga ggacatcccg cgagccacgt actaccgggg tctcggaacc gccgtggccc
      301 acgcgaacca ggcgattttc gcggaggccg aacggcatcc ggaatgccag gggatgggta
      361 cgaccttgag cctcgccgtc gccgatggtc gcagccttca cgtcgcgaat gcgggcgatt
      421 cccgcgtgta catcgtcaat gagcgagaga ttttccaggt gacccgggac cattccctcg
      481 ttcaggagat ggtcgatcgc ggggagctgc tgcccgagga agcgaagcac catcccagga
      541 aaaacgtcat cacgatggcc ctcggagtct acgaggaggt cacgccggac atcggatgtc
      601 tgacgatgga gcctggtgac accgtcttgc tgtgctgcga cggtctcatc aatcacgtgg
      661 aagacgaaga cattcatcgc gtcgtggtcg aaacgagcga tccccagagg gcctgcgaga
      721 tccttgtcgc gttggcgaac aagggcggcg ggacagacaa catctcggtc atcatcgcgc
      781 gcgccccacc tctttccaca acgtgagcga catgttcatc cttcggaata tcccacgcgc
      841 gaacctctcg ctgagagacg gaggaagcga caaggagacg gattcgtgaa acgcacttac
      901 ttcctcgtcg caatcgccag cctgcaaatc ctcctcgggt cgatcaccct gatcggtgcg
      961 gcccagccgg tacggatgac cgaaaacgtc gtcgtcctcc aagggaacta ctacctcttc
     1021 gaatttggca tcttggggac ggggcgtttg agcggcaatc tctccgaact tcaaggcctg
     1081 tccttcaccc tgttcgtctt cgatgacgcc ggctacgcgt ctttccgcga tggctccaac
     1141 tccgtggctc cactctacca acagagcggg acgaggatcg tgttcgccat gaatcttacc
     1201 ggctccggtc agtatcatgt cgtcgcggtc gacgtccccc agaggcgcaa actccaaatc
     1261 cagcttgact tcgtcgtttt ggggttgaag acctgggaga cgatcgttgc gctcatcgta
     1321 ctcgtcggcg ggttggcctt ggtgggggcc acgctcatgt tgagcgtttg gtcatggcgc
     1381 cgggcccgtg cggctcccgc cgctcccgca ccgtccgccg acccgacgtc ggatccgttt
     1441 cccgacccgc ccctggaacc tgttcctgat ccgtcctccg acccgcaggg agccgcgccg
     1501 gatccgcccg acgacaatac gcgaatctac tgagcactct atcgcgccgt cgacgcattc
     1561 ggcggttcga cctcagcccg gttgtacc
//
LOCUS       DATLMA010000184         2673 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_680356, whole genome shotgun sequence.
ACCESSION   DATLMA010000184 DATLMA010000000
VERSION     DATLMA010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680356"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2091
                     /locus_tag="VNA10_02295"
     CDS             <1..2091
                     /locus_tag="VNA10_02295"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORC1-type DNA replication protein"
                     /protein_id="HVG36540.1"
                     /translation="KGERPSNVLIFGKTGTGKTAVVKYIENEFRKADGARMVQYLYLN
                     CEIVDTPYGVLQSIGNKFIENFHQRIPFTGLSTDRVYSLLLEKLDEEKRVVIVALDEI
                     DKLVQKNGDDILYQLLKINDDLSKARVSLIGISNELTFTEYLDPRVRSRLADEKMVFP
                     PYNADELYDILTERSRLAFENGTAADGVLQLIAALAAQEHGDARRALDLLRVSAELAE
                     RQGDEHITEEHVQRAKNKIELDTVIEAVKSLPTQSKLILLGILLNEEIGNTKLTTGEV
                     YTTYRDLSRKTGVTPLTQRRVTDLISELDMLGLVHARVRSFGRGGRTKEIQASVPLLD
                     VKKVLEKDEILAEARGYRLKVQTTLLWLAVPSIVRFFVRRFRFGFRRVSFRRRGLRPP
                     LPGPSDLREPRRDVLRPSAHPIFQDEREREEEEEAHEQAVPAVLRRARVAPAVRTAGV
                     RRLEGELQEAEPGELAARPADDVPLAGEPSRVIHGGIVVPHRDVSGLWRKAAEVREVE
                     RDSEIMPEPHRVDRHGVQVERARRRTRIPGRRPIRDAREVRNARRAVRVERDVHDGPM
                     DDRRRVARSPEDDHVPVVSVRRVARRPALEVRDDVRAGRRGLLEHHVPRVDHAEERLA
                     VRVLHRRALDDHEGRPHAGVEVDCGEEDDHDDRRHEEVPCKPLPEILVFFLVILVSRT
                     VAGHGPFRQGWESV"
     gene            complement(2111..>2673)
                     /locus_tag="VNA10_02300"
     CDS             complement(2111..>2673)
                     /locus_tag="VNA10_02300"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HVG36541.1"
                     /translation="IRAHVTAPVWAVFGNNEYTSDHPAYVARFADAFGIRFLQDESAV
                     FESPKGSVRIIGSVGSLDRPTWWQRRNLPRIAEEYERRVKVLDGLLAGNGTRILLTHY
                     PPTYVTMGGEKEEWRPELGSKALESVLLRRRPTLVIHGHIHKGIPSGELRPRFDRLDD
                     FEGDVAPIPVHNVAYPVRHAVSTIDV"
BASE COUNT          490 a          888 c          855 g          440 t
ORIGIN      
        1 aaaggcgagc gtccgagcaa cgtgctcatc ttcggcaaga ccggcaccgg gaagacggcc
       61 gtcgtcaagt acatcgagaa cgagttccgc aaagccgacg gcgctcggat ggtccagtac
      121 ctctacctga actgcgaaat cgtcgacacc ccgtacggcg tgctccagtc aatcggcaac
      181 aagttcatcg agaacttcca ccaacggatt ccgttcaccg gcctgtcgac ggaccgcgtg
      241 tacagcctgc tcctggagaa gctcgacgag gagaagcgcg tcgtgatcgt ggccttggac
      301 gagatcgaca agctcgtgca gaagaacggc gacgacatcc tgtaccagct cctgaagatc
      361 aatgacgacc tgtcgaaagc gcgcgtctcg ctgatcggca tctcgaacga gctgaccttc
      421 acggaatacc tcgacccgcg cgtacgctcc cggctcgcgg acgagaagat ggtgttcccg
      481 ccctataacg cggacgaact gtacgacatc ctcaccgagc gatcgcggct cgcgttcgag
      541 aacggcaccg cggcggacgg ggtcctccag ctgatcgcgg ccctcgcggc gcaggagcac
      601 ggcgacgcgc ggcgtgccct cgacctcctg cgggtgagcg cggagctcgc cgaacgccaa
      661 ggggatgagc acatcaccga ggagcatgtg cagcgggcga agaacaagat cgagctcgac
      721 acggtcatcg aggcggtgaa gagcctcccg acgcaatcca agctcatcct cctaggcatc
      781 ctcctgaacg aggagatcgg gaacacgaag ctcacgacag gcgaggtcta cacgacatac
      841 cgagacctgt ctcggaagac cggggtgacg ccgctcacgc aacgccgggt cacggacctc
      901 atctccgagc tggatatgct cggcctcgtc cacgcccgcg tccggtcgtt cggccgcggc
      961 gggcggacga aagagatcca ggcgtccgtg ccgctgctgg acgtgaagaa ggtcctggag
     1021 aaagacgaga tcctcgcgga ggcccgaggc taccgcctca aagttcagac cacgctgctc
     1081 tggctcgcgg ttccgtcaat cgttcggttc ttcgtccggc ggttccgctt cggcttccgg
     1141 cgggtctcct tccggcgccg cgggcttcgt ccgccgcttc cagggccatc ggatctccgg
     1201 gagccgcggc gagacgtact tcgtccatcc gcgcatccca tattccagga cgaacgggag
     1261 cgagaagagg aagaggaggc tcacgagcag gctgtcccag ctgttcttcg gcgcgcgcgt
     1321 gtcgccccag ccgtccgtac agcaggagtc cgtcggctgg agggtgagct tcaggaggcc
     1381 gaaccagggg agctcgccgc gcgcccggcc gatgatgtcc ccctggcggg ggagccaagt
     1441 cgtgtcatac acgggggcat tgttgtcccc catcgtgatg tatccggatt gtggcgcaaa
     1501 gccgccgaag ttcgcgaagt cgaacgtgat tccgagatca tgccggaacc ccatcgcgta
     1561 gatcgtcacg gtgtgcaagt agaacgggct cgtcgtcgga cccgtatccc cggtcgccgt
     1621 ccaattcgag atgcccgcga ggtccggaac gctcgccgtg ccgttcgcgt agagcgtgat
     1681 gtacatgatg gcccgatgga tgaccggcgt cgggttgccc gctcgccgga agatgatcac
     1741 gtccccgtag tctccgtacg tcgcgtagcc cgccgcccgg ccctcgaggt acgtgacgac
     1801 gtccgcgcgg gtcggcgcgg cctgctggaa caccatgtcc cccgtgtcga tcacgccgag
     1861 gaacgactcg ccgtccgagt gctgcatcga cgagctctcg acgaccacga ggggcggcca
     1921 cacgccggtg tagaggtaga ttgcggcgag gaagacgacc acgatgatcg ccgccacgag
     1981 gaggtcccgt gcaagcccct tccagaaatt ctcgtcttct tcctcgtcat cctcgtctcg
     2041 cggacggtcg cggggcatgg gccctttcgc caaggatggg aatccgtata aaccccacgc
     2101 gggcggcccg ctacacgtcg atcgtggaga cggcgtggcg gaccggatag gcaacgttgt
     2161 gcaccgggat cggtgcgaca tccccttcga aatcgtccaa ccggtcgaac ctcggacgga
     2221 gctcacccga ggggatcccc ttgtggatgt gcccgtggat cacgagcgtc ggtcgtcgcc
     2281 gcaagaggac cgactcgagc gccttcgagc cgagctccgg tcgccactct tccttctcgc
     2341 cgcccatcgt cacgtaggta ggcggatagt gcgtcaggag gatccgcgtg ccgttccctg
     2401 cgaggagccc gtcgaggact ttcacgcgcc gctcgtactc ctccgcgatc cggggcaggt
     2461 tcctccgctg ccaccacgtc ggccggtcca ggctgccgac gctcccgatg atgcggacgc
     2521 tccccttcgg cgattcaaac accgccgact cgtcctggag gaaccgaatg ccgaacgcgt
     2581 cggcgaatcg ggcgacgtag gccggatggt cgctcgtgta ctcgttgttc ccgaacacgg
     2641 cccacaccgg ggcggtcaca tgcgcccgga tcg
//
LOCUS       DATLMA010000185         2043 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_198203, whole genome shotgun sequence.
ACCESSION   DATLMA010000185 DATLMA010000000
VERSION     DATLMA010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198203"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1508
                     /gene="polC"
                     /locus_tag="VNA10_02305"
     CDS             <1..1508
                     /gene="polC"
                     /locus_tag="VNA10_02305"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HVG36542.1"
                     /translation="HSLFPIGHEGGAQRLLLEAASKETIEVEVGLRICASCGKRWFLP
                     KCSCGGHTVSRNGPTRQRIPLADVLRTALERTGETKPAEIKAVQGMISRTKTPEPIEK
                     GVLRAKHDVYVFKDGTTRFDMTNLPLTHFTPHEVGISVETARRLGYTRDRGGRLLERD
                     DQTVELRAQDIVVARSCGEYLVRVAGFVDDLLERLYGLGRFYGAKAPEDLLGHLVVTL
                     APHTSCGVLARIVGFTDANACFAHPYLIAARRRNCDGDEDSVILLLDCLVNFSRAFLP
                     DKRGGLMDAPLVLTSRIDPNEIDKEAHNLDVMSAYPTSLYEAAERFAHPKEIEPQIDT
                     VGKRIGSVLQYEGFAFTHETTDVAQGPLASAYGEGSMAEKIDKQLDLALRIRAVDPND
                     VVARIVVHHFLPDLIGNLKAFSSQQVRCTKCGEKYRRIPLRGKCLACGGNLTLTVHES
                     SVKKYLEISKRISQQFEVSNYLRQRIDLIEDAITSLFTNDKTQDLKLDDFF"
     gene            complement(1505..1831)
                     /locus_tag="VNA10_02310"
     CDS             complement(1505..1831)
                     /locus_tag="VNA10_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36543.1"
                     /translation="MARRCPECYAELPEDAVWVCPTCKYTLRIPAAAKAGIVFMVLGL
                     ALLGAFVYGPDQIGLRSGFVPTDVVSLTIANFPLLVVGAFGVGALLVAAAALKVRSEQ
                     ARVSAA"
BASE COUNT          394 a          678 c          644 g          327 t
ORIGIN      
        1 cccactccct cttcccgatc ggccacgaag gaggggccca gcgactcctt ctcgaagcgg
       61 catccaagga gacaatcgag gtcgaggtcg gcttgcggat ctgcgcctcg tgcggcaagc
      121 ggtggttcct tccgaagtgc tcctgtggcg gacacacggt ctcccggaac ggcccgacgc
      181 ggcaacgcat ccccttggcc gacgtcctcc ggacggcgct cgaacgcacc ggcgagacga
      241 aacccgcgga gatcaaggcc gtccagggaa tgatctcgcg tacgaagact cccgagccga
      301 tcgagaaagg cgtcctccgt gcgaagcacg acgtctacgt gttcaaggac ggcacgaccc
      361 ggttcgacat gacgaacctg ccgctcacgc acttcacgcc gcacgaagtg gggatctcgg
      421 tcgagaccgc tcgacgcctc gggtacacgc gggaccgcgg cggccgtctc ctggagcggg
      481 acgatcagac cgtcgagctg cgggcgcaag acatcgtcgt cgcgcgctca tgcggggaat
      541 accttgtccg cgtggcgggg ttcgtcgacg acctgctcga gcggctctac ggcctcggcc
      601 gattctatgg cgcgaaggcg cccgaggact tgctcggcca cctcgtcgtc acgctcgccc
      661 cgcacacgag ctgcggggtc ttggcccgca tcgtcggctt cacggacgcg aacgcgtgtt
      721 tcgcccatcc ctacctcatc gcggcacgac ggcggaactg tgacggcgac gaagattctg
      781 tgatcctgct cctcgattgc ctcgtcaact tctcccgcgc gtttctcccc gacaaacgcg
      841 gcgggctgat ggacgcgccg ctggtcttga cgtcccgcat cgatccgaac gagatcgaca
      901 aggaggccca caacctcgat gtcatgtcgg catacccgac ctcgctgtac gaggccgcgg
      961 aacgattcgc gcatccgaag gagatcgaac cgcagatcga cacggtgggc aaacggatcg
     1021 ggagcgtcct tcagtacgaa ggattcgcgt tcacgcacga gacgacggac gtcgcgcaag
     1081 gcccgctcgc gtccgcgtac ggcgagggct cgatggcgga gaagatcgac aagcaactcg
     1141 acctcgcgct ccgaatccgg gccgtcgacc cgaacgacgt cgttgcgcgg atcgtggtcc
     1201 accacttcct gccggacctg atcggaaacc tgaaggcgtt ctcgagccag caggtccgtt
     1261 gcacgaagtg cggggagaag taccgccgga tcccgctccg ggggaaatgc ctcgcctgcg
     1321 gcgggaacct cacgctgacg gtccacgaga gctcggtgaa gaagtacctc gagatctcca
     1381 agcgaatcag ccagcagttc gaagtctcga actatctgcg tcagcgcatc gatctgatcg
     1441 aggacgcaat cacgtcgtta ttcacgaacg acaagacgca agacctgaag ctcgacgatt
     1501 tcttctaggc ggccgagacc cgcgcctgct cggatcggac tttcagggcg gcggccgcga
     1561 cgaggagggc gccgacgccg aacgcgccga cgacgagcaa cggaaagttc gcgatcgtca
     1621 gactaacgac gtccgtcggc acgaagcccg acctcagacc gatctggtcc ggaccgtaca
     1681 cgaatgcacc caggagtgcc aagcccagga ccatgaaaac gatgcccgcc ttcgctgcgg
     1741 cgggaatccg cagcgtgtac ttgcacgtcg ggcacaccca taccgcgtcc tcgggaagtt
     1801 ccgcgtaaca ctccgggcag cggcgcgcca tcgcgcggga cagaaaggcc gcggagaaat
     1861 agtttgcgtc aatgttttcc ggacgcgcga ggaaccgcgg ataatccttt agtagcgggg
     1921 gccggttcgc gagcgaatga ggaagtcgac cgccatcgcg ttggcctcgg tcacgctcct
     1981 cgcgatcgcg gtgcggctct cgcctctctg gtccttctta tattggggct ccgacaccgg
     2041 gga
//
LOCUS       DATLMA010000186         4366 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_680458, whole genome shotgun sequence.
ACCESSION   DATLMA010000186 DATLMA010000000
VERSION     DATLMA010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4366
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680458"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..876
                     /locus_tag="VNA10_02315"
     CDS             <1..876
                     /locus_tag="VNA10_02315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor Spt5"
                     /protein_id="HVG36544.1"
                     /translation="PEPPAVGHYAVKLDLKEEKVSLTAGQTKEYAVVVTNTGTEDDTI
                     RIKVDLVYHSELPDPPEWTVKLYGVEDKVWDVTFTKLTEKDFRLIADGQREITLTVTC
                     PKGARYGDRLNVVVNAISKGDPGAFDAKTLSFSARQAVLAVKSSIGHERAVADAIYAR
                     AKAKDVGVFSVLVPANFRGYVYVESMNPDRLEEVVRGLRRARGVVKGEGESTGIGFSE
                     IEAYLTPKPIVSGIMEGDIVELVAGPFKGEKARVMKIDETKEEITVELFEAMVRIPVT
                     VRGDSVRVLQKEEEK"
     gene            1093..1572
                     /locus_tag="VNA10_02320"
     CDS             1093..1572
                     /locus_tag="VNA10_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012034350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HVG36545.1"
                     /translation="MVEKLNVLVDGGKATPGPPLGPALGPLGLNIVEIIKAINDKTKS
                     FEGMKVPVTLIVDPKSKAFTIEVGTPPTSALITKELKVEKGSGDPGKTRVGNLSLAQA
                     IKIANMKADAMQAKTLKARVLEVVGTCVSNGVTVEGKPAKELSKEIQAGKFDKQLAG"
     gene            complement(1575..2393)
                     /locus_tag="VNA10_02325"
     CDS             complement(1575..2393)
                     /locus_tag="VNA10_02325"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG36546.1"
                     /translation="MREEDVARALETLGLTGKESRAYLSLLQNGVATAQHVSQLLGVQ
                     YPAVYRILQSLQTKGWIEVSRERPNRYRARAPRIVAEEARQSKGDDLVAAAEMVGGLK
                     ESVPSKARENETDLWIYKGTESIGRKLREVVLSSSGQILCVSPFPVAPEILRLLFDAL
                     GRSRRVVRVVLNEANRADLAELGSLLGRNMRVQFHFPARPLSATRLAHTYVFPSDQEV
                     FILNSFYREGELAADKLQGLWVGDMDFVRIQLEAMLLDLSQPTPRERKAFPKAR"
     gene            2646..3284
                     /locus_tag="VNA10_02330"
     CDS             2646..3284
                     /locus_tag="VNA10_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012900823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HVG36547.1"
                     /translation="MADKHSVETIKKLLEAAKPRAFKESVEVAVNLRDVDLSVPKNRV
                     EEDVVLPKGRGKPIRVCVFASGELALKARNAADLVIQPQEIEEYASDKRKARTLATSY
                     DFFIAEAPLMPVIGKRLGVVLGPRGRMPRPVPPTADPTNLINSLRNTVRVRSRDKRTF
                     HAAIGTRDMPPEDLAENLDALMRRVVGKLERGRFNIQSAYVKTTMGPAVKYL"
     gene            3294..4175
                     /locus_tag="VNA10_02335"
     CDS             3294..4175
                     /locus_tag="VNA10_02335"
                     /inference="COORDINATES: protein motif:HMM:NF003098.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HVG36548.1"
                     /translation="MAHVAPYKKQLVENLAMRCAQARVVGIANIHGIPAPQFQAIRKK
                     LSGRATITVAKNNLLRLALQQASEKKPDLVKLSDTIEGQTAVVTADINPFRLFKELEA
                     TKTRAPARGGEVAPEDLWVRAGETPFKPGPVVGELQKAGIPAAIERGKVMIRQDKLMV
                     KAGQRIPREVAQQLARLEIFPLVVGLDLRGAYEAGTVFRRDALEVDDTVVRGQIAQAW
                     REALALALTIAYPTRETIRPLLAKAHAQALELAVESEFPTKESIKFLLAKAQAQMLAL
                     VARAPGAADEALRTMTG"
     gene            4201..>4366
                     /locus_tag="VNA10_02340"
     CDS             4201..>4366
                     /locus_tag="VNA10_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014733188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L12"
                     /protein_id="HVG36549.1"
                     /translation="MEYVYGALVLHAAGKPVNEENLKKVLTAAGVKVDETRVKALTAA
                     LEGVNIDEALK"
BASE COUNT          864 a         1348 c         1440 g          714 t
ORIGIN      
        1 cccgagccgc ccgcggtcgg ccactacgcc gtaaaactgg acctgaagga agagaaagtc
       61 tccctcaccg ccggacagac gaaagagtac gccgtcgtcg tcacgaacac cgggaccgag
      121 gacgacacga tccggatcaa agtggacctc gtctatcatt ccgagctccc cgatccgccg
      181 gaatggacgg tcaaactgta cggcgtcgaa gacaaggtct gggacgtcac cttcacgaag
      241 ctcacggaga aggactttcg attgatcgcg gacggccagc gtgagatcac cttgaccgtc
      301 acgtgtccga agggcgctcg gtacggggac cggttgaacg tcgtcgtgaa cgcgatctcg
      361 aagggcgacc cgggcgcctt cgacgcaaag accctgagct tcagtgcgcg gcaagcggtc
      421 ctcgcagtga agtcctcgat cggtcatgag cgcgccgtgg ccgacgccat ctacgcccgg
      481 gccaaggcaa aggacgtcgg ggtcttctcg gtcctcgtgc ccgcgaactt ccgcggctac
      541 gtctacgtcg agagcatgaa tcccgaccgc ctcgaggaag tcgtccgcgg tctgcgacgg
      601 gcccgcggtg tcgtgaaggg cgagggcgag tcgacgggga tcggcttctc ggagatcgag
      661 gcgtacctca ccccgaagcc gattgtcagc gggatcatgg aaggcgacat cgtcgaactg
      721 gtcgccggcc cgttcaaggg agaaaaggca cgcgtcatga agatcgacga gaccaaggaa
      781 gagattaccg tcgagctgtt cgaggcgatg gtccgcatcc cggtgacggt ccgcggcgac
      841 agcgtccgcg tcctccagaa ggaagaggaa aagtgattcg ggccatctga gatggttggc
      901 tccgtggcgc tccgttaacc ttgtttaagg ttgcatccat gatcttgcgg tgatcatcgc
      961 tgttgtggcc gcctccccgg gttgcacgct tcggacgtca cggctctgat ggtcgagcga
     1021 tgattcgatg agcacggtcg aaacgtttat gccggctcgc tctctcgggc cgccttaccg
     1081 aggtttcgga cgatggtgga gaagctgaat gtcctcgtcg atgggggcaa ggcgaccccc
     1141 gggcctccct tgggaccggc actcggtcct ctcggtctga acatcgtcga gatcatcaag
     1201 gcgatcaacg acaagacgaa gagtttcgaa gggatgaaag tccccgtcac gctgatcgtc
     1261 gatccgaagt cgaaagcctt cacgatcgaa gtcgggaccc ccccgacatc cgcgctcatt
     1321 acaaaagagt tgaaggtcga gaaaggctcc ggcgaccccg gcaagacgcg ggtcgggaac
     1381 ctgtcgctcg cgcaggcgat caagattgcc aacatgaaag cggacgcgat gcaggcgaaa
     1441 accctgaagg cgagggtcct cgaggtggtc ggcacctgcg tctcgaatgg cgtgaccgtc
     1501 gaaggaaagc ccgcgaaaga gctctcgaag gagatccaag cgggcaagtt tgacaagcaa
     1561 ctcgccggct gaggtcagcg ggctttcggg aacgccttgc gctctcgagg ggtcggttgc
     1621 gacaggtcga ggagcatcgc ctcgagctgg atgcggacga agtccatgtc gccgacccag
     1681 agcccctgga gtttgtccgc cgcgagttcc ccctcgcggt agaaggaatt caggatgaac
     1741 acttcctggt cgctcgggaa cacgtacgtg tgggcgagcc gcgtggcgga cagcgggcgg
     1801 gcggggaagt ggaactggac gcgcatgttc cgtccgagga ggctcccgag ttccgcaagg
     1861 tccgcgcggt tcgcctcgtt cagtacgacc cgcacgacgc ggcgggaccg gccgagggcg
     1921 tcaaacagga ggcgcaggat ctcgggggcg acggggaacg gactcacgca caggatctgt
     1981 ccgctgctgg agaggaccac ctcgcggagc ttgcgaccga tcgactccgt ccctttgtag
     2041 atccagaggt ccgtctcgtt ctcccgtgcc ttcgaaggga cgctctcctt caacccgccg
     2101 accatttcgg ccgcggcgac gagatcgtct cctttcgact gccgcgcctc ttccgcgacg
     2161 attcgaggcg cgcgggcccg atatcggttc gggcgctccc gcgacacctc gatccagcct
     2221 ttcgtctgca gggactgcaa gatccgatag accgccggat actgcacgcc gaggagctgg
     2281 ctgacgtgct gagcggtcgc gacgccgttc tggaggaggc tcaggtacgc acgcgattcc
     2341 ttgccggtga gaccgagggt ctcgagggcc cgcgcgacgt cctcctcccg cacgtatcgg
     2401 tctaggggcg atggctacaa aagggttatg cagttatcat cggccgactg ataattcctt
     2461 ggcgacgcag ctcggatggt cgaagggcgc gaccgacgat ggagagcgtc gaatcacgtc
     2521 tgtaattctc cgaagatgga cccgacgtcg cgcgtccgca aagccttatt agggccacgc
     2581 tctttggccg cctctcctct gcaggaggcc accacggctg cacgcactgc aggaggcgat
     2641 ttcccttggc ggacaagcat tcggtcgaga ccattaagaa gctgctcgag gccgccaagc
     2701 cacgggcgtt caaggagtcc gtcgaggtcg ccgtgaacct ccgcgatgtt gatctctcgg
     2761 tcccgaagaa tcgcgtcgaa gaggacgtcg tcctgcccaa aggacggggg aagccgatcc
     2821 gcgtttgcgt gttcgcgtcg ggagagctcg ccttgaaagc gcggaacgcc gcggacctcg
     2881 tgatccagcc gcaggagatc gaggagtacg cgagcgacaa gcggaaggcg aggaccctcg
     2941 cgacgtcgta cgacttcttc attgcagaag ccccgctcat gcccgttatt ggcaagcgtc
     3001 tcggtgtcgt cctcggaccg cgagggagga tgccgcgtcc ggtgccgccc accgcggatc
     3061 cgacgaacct gatcaactct ttgcggaaca cggtccgggt ccggagccgc gacaagcgga
     3121 cgttccatgc ggcgatcggg acgagggaca tgcccccaga ggatctcgcc gagaatctgg
     3181 acgccttgat gcgccgcgtc gtgggcaagc tggagcgcgg acgattcaac attcaatccg
     3241 cctacgtcaa gacgacaatg ggccccgcgg tgaagtacct ctgaggtggt cccatggcgc
     3301 acgtcgctcc ctacaaaaag caactcgtcg agaacctcgc gatgcgttgc gcgcaggccc
     3361 gcgtcgtcgg gatcgctaac atccacggaa tccccgcgcc gcagttccag gcgatccgga
     3421 agaagctctc cgggcgcgcg accatcacgg tcgcgaaaaa caacctgctg cgtctcgcgt
     3481 tgcagcaggc gagcgagaag aagccggacc tcgtcaagct cagtgacacg atcgaggggc
     3541 agacggccgt cgtgacagcg gacatcaatc cgttccgact cttcaaggaa ctcgaggcga
     3601 cgaagacacg cgcccccgcc cggggaggcg aggtcgcgcc cgaagacctc tgggtccgcg
     3661 cgggcgagac gccgttcaaa cccggcccgg tcgtcggtga actccagaag gcgggtattc
     3721 ccgccgcgat cgaacgcggc aaggtcatga tccgccaaga caagctcatg gtgaaggcgg
     3781 gtcagcggat cccgagggag gtcgcccagc agctcgcgcg actcgaaatc ttcccattgg
     3841 tcgtcggact tgatttgcgg ggtgcgtacg aagccggcac ggtgttccgg cgggacgccc
     3901 tggaagtgga cgatacggtc gtccgcggac agatcgccca ggcctggcgg gaggcgctcg
     3961 ccctcgcgct cacgatcgcg tacccgacca gggagacgat ccgcccgctc ctggcgaagg
     4021 cccacgcgca ggcgctggag ctcgccgtcg agtccgagtt cccgacgaaa gagtcgatca
     4081 agtttctcct tgccaaagca caagctcaga tgctcgccct cgtcgcgcgc gcgcccggcg
     4141 cggccgatga agcgcttcgc acgatgaccg gatgatcaaa caacaaggag gtgacgacga
     4201 atggaatatg tgtatggggc gttggtcttg cacgcggccg gcaagccggt caacgaggag
     4261 aacctgaaga aggtcctcac cgcggccggg gtgaaggtcg acgagacccg cgtgaaggcc
     4321 ctgaccgccg cgctggaagg cgtgaacatc gacgaggccc tgaagg
//
LOCUS       DATLMA010000187         3515 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_139709, whole genome shotgun sequence.
ACCESSION   DATLMA010000187 DATLMA010000000
VERSION     DATLMA010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139709"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1680)
                     /locus_tag="VNA10_02345"
     CDS             complement(67..1680)
                     /locus_tag="VNA10_02345"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HVG36550.1"
                     /translation="MTPTTADETSFGRLAELTRQLEATTKRLEKRALLAAFLRSLRRD
                     EVAPAVHLIVGRIFAESDARALNVGWATLQKALGRTKQASLVPRTLSILEVSKSFAQI
                     AETHGPDSTRVRRRLLESLLGRASEDERDVLLKNVFGEMRIGVNEGVMLDGIADASGV
                     DLDSVRTAHMFLGDLGTIAEIALFEGADGLRSRGLRLLAPMKPMLAEMSEDLDEVLAV
                     HGGTTAIEYKLDGARIQIHRKGEAVKIFSRRLSDVTSSLPEIVAIAKSLPASEFLLEG
                     EVVAVDRDGKPLPFQDLMRRFRRVHGIESAAEEVPLKLYLFDVLHLDGRTLIDAPYRE
                     RWEILERLVPAELLTARRVVQRKEEIESFLQEALVAGHEGLMAKQLESTYSVGKRGKK
                     WFKIKPADHLDLAITAAEWGSGRREGWLSNYWLAVRDDKGGGFQMIGKTFKGLTDAEF
                     QAMTERLRGLATSEERWGFHVRPETVVEVAYNEIQRSPHYPSGFALRFARIARIRDDK
                     GPQEVDTYERLKDLYAKQFERKGRGPDDL"
     gene            complement(1677..2615)
                     /locus_tag="VNA10_02350"
     CDS             complement(1677..2615)
                     /locus_tag="VNA10_02350"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HVG36551.1"
                     /translation="MVLPERTRGYLAIIVAAVLFGVWPTLSKLVLNAVSPLAIAFLIQ
                     VIPGAALLPFVRRVRIHRSDWKTILVSGVVGAVIGPLFYFYGLERTTASNSVLLSNSE
                     SLFTMLLAYAFLRERATRREYVALVGIAVGAFLVTTQLRFGDVRFVEFLIGNVMLVAA
                     AACWGASNTMSAVLLRRIPIVTLLEVQLLIGAAAFAGIVAFTGTSLAVPLDVLPLLVL
                     LSLSAVGIFSVLFFYAFRTIGAMRTGAVLPSSALWGILAALYVFPTETLSPVQLLGGA
                     LMVGSLIAFYILRGPAEAKSDGETLKPAGSDGPDSP"
     gene            2728..>3515
                     /locus_tag="VNA10_02355"
     CDS             2728..>3515
                     /locus_tag="VNA10_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HVG36552.1"
                     /translation="MVDALRVIRDDGSTDPRLDPKFSEDQAIAMYRGMSLQRILDNRM
                     LALQRQGRIGFYGPSLGQEAAIIGAAMAMGPEDWIVPQYREPGAALVRGMPLKELLCQ
                     LMGNAEDPVKGHQMPCHYVYRKGNYLSISSPVGTQLPHAVGIGWAMKLRGEKKAVLVF
                     FGDGATSTGDFHAAMNFAGVFRTPTVFLCNNNQWAISVPVAKQTASATLAEKANAYGF
                     DGIRVDGMDALAVYRATRDAARNAREGLGPMMVEAVTYRIGPHSS"
BASE COUNT          641 a         1164 c         1138 g          572 t
ORIGIN      
        1 gtatacctct acttagaggt atgaaccggc tccatcaggc actcgttgtg tcggccatcg
       61 cccggatcac agatcgtccg ggcctcggcc cttccgttcg aactgtttcg cgtagaggtc
      121 cttcagccgc tcgtacgtgt cgacctcctg cggccctttg tcgtctcgaa tccgcgcaat
      181 ccgcgcgaag cgaagcgcga acccgctcgg gtaatgcggg cttcgttgga tctcgttgta
      241 tgcgacctcg accacggtct cgggtcgcac atggaatccc cagcgctcct cggacgtcgc
      301 gaggccgcgc aaccgctccg tcatcgcctg gaactccgca tccgtgaggc ccttgaacgt
      361 cttcccgatc atctggaacc cgccgccctt gtcgtcccgc acggcgagcc agtagttcga
      421 gagccagcct tcccgccggc cgcttcccca ttcggccgcg gtgatcgcga ggtcgagatg
      481 gtccgcgggc ttgatcttga accacttctt gcctcgcttc ccgacggagt acgtcgactc
      541 gagttgcttc gccatcaagc cttcgtgtcc ggcaacgagg gcctcctgga ggaaggactc
      601 gatctcctcc ttccgctgga caacccgccg tgccgtcagc aactccgccg gcacgagccg
      661 ttcgaggatc tcccatcgtt cacgatatgg cgcgtcgatc agcgttcggc cgtcaaggtg
      721 gagcacatcg aagaggtaca gtttcagcgg aacctcttcc gcggcggatt cgatgccgtg
      781 cacgcgtcgg aagcggcgca tgaggtcctg gaacggaagc ggctttccgt cccggtccac
      841 ggcgacgacc tctccttcga gcaggaattc ggacgcgggc aacgatttcg cgatcgcgac
      901 gatctccgga aggctggacg tgacgtcgct caagcgccga ctgaagatct tcaccgcctc
      961 ccccttccga tggatctgga ttcgcgcgcc atccagcttg tattcgatgg ccgtcgtgcc
     1021 gccgtgcacc gcgagcacct cgtcgaggtc ctccgacatc tcggcgagca tcggtttcat
     1081 gggagcgagg agacgcaggc cccgggagcg aaggccgtcc gcgccttcga agagcgcaat
     1141 ctcggcgatc gtccccaagt ccccgaggaa catatgggcg gtcctcacgg agtccaggtc
     1201 cacgccggac gcatccgcga tcccgtcgag catcacgccc tcgttcacgc cgatccgcat
     1261 ttccccgaac acgtttttca agagcacgtc ccgctcgtct tcggacgccc gtcccagcag
     1321 gctctcaagg agccgtcgac gcactcgcgt cgagtcgggg ccgtgggttt ccgcgatctg
     1381 cgcgaacgac ttcgacacct cgaggatgct cagggttcgc gggacgaggc tggcttgctt
     1441 cgtccgtccg agcgcctttt gaagcgtcgc ccagccgacg ttcaaggcgc gcgcgtccga
     1501 ctcggcgaag atccggccga cgatcaggtg gaccgcgggc gcgacctcgt ccctccggag
     1561 ggagcgcagg aaagccgcga ggagcgcgcg cttctcgagc cgcttcgtcg tggcctcgag
     1621 ctgccgcgtc agctccgcga gtcgtccgaa ggacgtctcg tccgcggtcg tcggcgtcac
     1681 ggtgaatcag gaccatccga cccggcgggt ttcaaggttt cgccgtcgga ctttgcctct
     1741 gccggaccgc ggagaatgta gaacgcgatg agggagccga ccatgagcgc gccgccgagc
     1801 aattggaccg ggctgagggt ctcggtcggg aagacgtaga gggcggcgag gatcccccag
     1861 agggcggagg acgggaggac cgcgcccgtg cgcatcgctc cgatcgtccg gaacgcgtag
     1921 aagaacagga ccgagaagat ccccacggcg ctgagagaga ggaggaccaa gagcggcagg
     1981 acatccagag ggaccgcgag cgaggtaccc gtgaacgcca cgatcccggc gaacgcggcg
     2041 gcgccgatca ggagctgaac ctccaggagc gtcacgatcg gaattcggcg aaggaggacg
     2101 gcactcatcg tgttgctcgc accccagcag gccgcggcgg cgaccagcat gacgttgccg
     2161 atcaggaact ccacgaagcg gacgtccccg aaccggagct gggtcgtcac gagaaacgcc
     2221 ccgaccgcga tgccgaccag ggcgacgtat tcacgccgcg tcgcccgctc ccggaggaac
     2281 gcgtaggcca ggagcatcgt gaagagagat tcgctgttcg acaacagcac ggagttggag
     2341 gcggtcgtcc gctcgagacc gtagaagtag aacaacggcc cgatgacggc ccccacgacc
     2401 ccggacacca gaatcgtttt ccaatcggag cgatggatcc gaacgcggcg cacgaacggc
     2461 aggagcgcgg ctcccggaat cacctggatg agaaacgcaa tcgccaaggg agagaccgcg
     2521 ttcagaacca gtttcgaaag cgtaggccag accccgaaga ggacggccgc cacgatgatg
     2581 gcgaggtagc cacgtgtcct ctctgggagg accaagaatc accgcgccga aaacgccgcg
     2641 gatgatttag agattctccg gtcggaaggc ttaaggccgc acctggcgtt ttgttttccc
     2701 cgggcctcgg ggggtgcgag gaacaccgtg gtcgatgcgc tccgcgtgat tcgggacgac
     2761 ggctcgacgg acccccgtct cgacccgaaa ttctcagagg accaggccat cgccatgtat
     2821 cgcgggatga gcctccagcg gatcctcgac aaccgtatgc tcgccctgca gcgacaaggg
     2881 cggatcgggt tctacggtcc gtcgctcggc caggaggccg cgatcatcgg cgcggcgatg
     2941 gcgatgggcc cggaggactg gatcgtcccg cagtaccgcg aaccgggcgc cgccctcgtc
     3001 cgcggcatgc cgctgaaaga gctcctgtgc cagctcatgg ggaacgccga ggatccggtg
     3061 aaaggccacc agatgccatg ccactacgtc taccgcaagg ggaactatct ctcgatctcg
     3121 tcccccgtcg gcacgcagct gccgcacgcg gtcggcatcg gatgggcgat gaaactgcgc
     3181 ggcgagaaga aggcggtcct cgtcttcttc ggcgacggtg cgacgagcac cggagacttc
     3241 cacgcggcga tgaactttgc gggcgtcttc cgaacgccga ccgtcttcct atgcaacaac
     3301 aaccagtggg cgatctccgt ccccgtcgcg aagcagacgg cctcggcgac gctcgcggag
     3361 aaagcgaacg cgtacggatt cgatggcatc cgcgtggacg ggatggatgc cctggccgtc
     3421 taccgggcga cgcgggatgc ggcgcggaat gcccgcgagg ggctcgggcc catgatggtg
     3481 gaggcggtca cgtaccgcat cggtccgcac tcctc
//
LOCUS       DATLMA010000188         1465 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_139745, whole genome shotgun sequence.
ACCESSION   DATLMA010000188 DATLMA010000000
VERSION     DATLMA010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139745"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1127
                     /locus_tag="VNA10_02360"
     CDS             <1..1127
                     /locus_tag="VNA10_02360"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HVG36553.1"
                     /translation="GQMFLAEGYRMRELGWRKYYPYWTVREAILPPLAVDEALDRVGP
                     VALQEDRTKPPGRYSEGSLIQEMERLGLGTKSTRHEIIKKLYDRKFIEGKYPKPTTSG
                     RALIEALEDHAERITQPEMTAHLEADMEGIATGVRAREDVVRESQQMLSEVLETLEAN
                     REAIGQEIEAALREQNYIGKCNVCKEGNLTVLRSRRGNRFLGCDRYPECRNTHPLPQI
                     GIIQGAEENCPECGAPMIKHTDRGRTTTYCVASACPSVREKNFIGRCEKCGDGELMIR
                     HGTYGKRFVGCSSYPGCDNSYPLPQRGLIVPTEERCNACGHPVIKVIMRGRPPWVLCL
                     NMKCPTKEGKGRKKGKDGPKKATRKRKAKPVEIVADIATG"
     gene            complement(1124..>1465)
                     /locus_tag="VNA10_02365"
     CDS             complement(1124..>1465)
                     /locus_tag="VNA10_02365"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HVG36554.1"
                     /translation="DGAIVPVGELKVKVVHTPGHSPDSCCFIVAGRVFTGDCLFVGDC
                     GRVDLPGSSVGDMYDSLFNKVQKMDDDLVVCPGHHYGKTRLSTIGEEKRTNFTLRPRT
                     LAEFTRFMASP"
BASE COUNT          322 a          453 c          480 g          210 t
ORIGIN      
        1 ggggccagat gtttctggcc gaaggctatc ggatgagaga actcggatgg cgcaagtact
       61 atccctactg gaccgtgcgc gaggcgatcc tgccgccctt ggccgtcgat gaggccctcg
      121 accgagtcgg acccgtcgcg ctccaggagg accggacgaa acccccgggc cggtacagcg
      181 aagggtccct gatccaagaa atggagcgcc tcggcctcgg gacgaagtcc acccggcacg
      241 agatcatcaa gaagctctac gaccgcaagt tcatcgaggg caagtatccg aaaccgacga
      301 cgagcgggcg ggcactcatc gaggcgttgg aggaccacgc ggaacggatt acccaacccg
      361 agatgaccgc gcacctcgaa gcggacatgg agggaatcgc gaccggcgta cgggctcgcg
      421 aggacgtcgt ccgggagtcc cagcagatgc tcagcgaggt gctcgagacg ctcgaagcga
      481 accgcgaggc gattggacag gagatcgagg ccgccctgcg ggagcagaac tacatcggca
      541 agtgcaacgt ctgcaaggag gggaacctca cggtcctccg gtcccggcgg gggaaccgat
      601 tcctcgggtg cgaccgatat cccgagtgcc gaaacacgca tcccttgcca cagatcggga
      661 tcatccaagg cgcggaggag aactgtcccg aatgcggcgc accgatgatc aagcacacgg
      721 accgcggccg gacgacgacg tattgcgtcg catccgcttg tccatcggtc cgggagaaga
      781 acttcatcgg ccgctgcgaa aaatgcgggg atggagaact catgatccgc cacgggacgt
      841 acggaaagcg tttcgttggc tgctcgagct accccggctg cgataactcg tacccgctgc
      901 cccagcgcgg cctcatcgtc ccgacggagg agcgatgcaa cgcgtgcggt cacccggtca
      961 tcaaggtgat catgcggggc cggccgcctt gggtcctctg cctgaacatg aagtgcccga
     1021 cgaaagaagg caaaggtcgg aagaaaggaa aagacgggcc gaagaaagcg acgcgcaagc
     1081 gaaaggcgaa gccggtcgag atcgtcgcgg acatcgcaac cggctagggc gaggccatga
     1141 accgcgtgaa ctccgcgaga gtccgcgggc gcaaggtgaa gttcgtccgc ttttcctcgc
     1201 caatcgtcga cagtcgggtc ttgccgtagt ggtggcccgg gcacacgacc aggtcgtcat
     1261 ccatcttctg gaccttgttg aacaacgagt cgtacatgtc cccgacgctc gatccgggca
     1321 gatccacccg gccgcagtcc ccaacgaaga ggcagtcgcc cgtgaagacc cgccccgcca
     1381 cgatgaagca gcacgagtca ggcgagtggc ccggggtgtg gacgactttt actttgagct
     1441 cgccaacggg aacgatcgca ccgtc
//
LOCUS       DATLMA010000189         1805 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_563676, whole genome shotgun sequence.
ACCESSION   DATLMA010000189 DATLMA010000000
VERSION     DATLMA010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563676"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VNA10_02370"
     CDS             <1..645
                     /locus_tag="VNA10_02370"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HVG36555.1"
                     /translation="RNEMCTCVYMAAKYPGVVRLGMKPRVTRGQAPSRPAVTTPVRLS
                     PKDEHIFRDLMERFAVLSEMCFRFSQDIYLRTGSVPELEVEETVQRNVSIARRVFGDR
                     FIEILTTIYLKKAVDAQELATILGDFPKTEMSRKLRVLETAGLVERGHSFEDPDSARY
                     SLTHKGTVIARLGEPVFLYLRLAEGWTTDPAKGQAVTATEGADQTGEYEAAPRT"
     gene            complement(1385..1497)
                     /locus_tag="VNA10_02375"
     tRNA            complement(join(1385..1420,1459..1497))
                     /locus_tag="VNA10_02375"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1460..1462),aa:Tyr,seq:gta)
     gene            complement(1553..1626)
                     /locus_tag="VNA10_02380"
     tRNA            complement(1553..1626)
                     /locus_tag="VNA10_02380"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1590..1592),aa:Phe,seq:gaa)
BASE COUNT          352 a          538 c          573 g          342 t
ORIGIN      
        1 agaaacgaaa tgtgtacttg tgtgtacatg gcggccaaat acccgggggt cgttcgcctc
       61 ggcatgaagc cgcgagtgac tcgcggtcag gcaccctccc gccctgctgt gaccaccccc
      121 gtccgtctct ccccgaagga cgagcatatc ttccgggacc tgatggagcg gttcgctgtc
      181 ctctcggaaa tgtgctttcg gttctcccag gacatctacc tccgcaccgg ctcggtgccc
      241 gagctcgagg tcgaggagac cgtccagagg aacgtctcga tcgcgcgccg cgttttcggg
      301 gaccgtttca tcgaaatctt gaccacgatc tatctcaaga aggccgtcga cgcgcaggag
      361 ctcgccacga tcctggggga cttcccgaag actgaaatgt cccggaagct ccgggtactc
      421 gaaacggcgg gtctggtgga acgagggcat tcgttcgagg acccggactc agcccggtac
      481 agcctgaccc acaaagggac cgtcatcgcc cggctcgggg agccggtgtt cttgtatctc
      541 cggctggctg aaggctggac caccgacccg gcgaagggcc aggccgttac ggcgacggaa
      601 ggagccgacc aaaccggaga atacgaggcg gcccctcgga cgtaggtccg cccccttcgc
      661 gcgaccgggg gcgtccgacg cgctccgctt cggtgaagga gagtccgcct atttccatgg
      721 ccaggaccgc cggcgtgccg gttgccgact actcagcttc ttgacttccg aagtgtgtcc
      781 ccggtgtaac aatgtcggcc aacgaaaacg cccgggttcc gtcgaggctt cgcttgagag
      841 ttgacgattt atcatgggac gactactctg agtacggtgt gaacggagtc gtgcgacgtc
      901 cttttggggc tggtgcgccg attacgttcc agctcgtcat ggtggcagag acgctgagac
      961 gagctgagaa tcctcggtcc gggttgtgga ctagggacgg tgccacttct gcgttcgatt
     1021 tggtgggccg catccggagc gttcgggtcg cacgcccttc gagcaagatt ccgaacccta
     1081 tcgcaagcgt cctgattgat gctgggcttc cgatcacggt taacacgaac agcgcagtcg
     1141 ttgccaagct cgaccgacgg cgtcaccatc cggtgttcgc gacggggcct ctggcggcaa
     1201 tctgctttcg atactggtgg gtcaagcctg tggtaccgct gaagggccgg gtagatttag
     1261 tcgaaacgat ggcggaggaa gacacattcc tcgagattac cggggtgagg cgcgcgaggg
     1321 gatccccaaa aagacagcgg aaacctacag catgagctcg acgtacagga catttgagaa
     1381 ggagtcccgc ctcccggatt tgaaccgggg gcctgatgat ggcagcgggc accgcgcacg
     1441 accgtgcacg ggagcactct acagtcaccc gctctgacca ggctgagcta aggcgggacg
     1501 cgcgacgaac tcttcacccg attaaaaagg ttgtcgcggg ctcgaggaga actgccgcgg
     1561 gccgggctcg aaccggcgac ttcgagatct tcagtctcgc actctcccaa actgagttac
     1621 cgcggcgcga agcgtccgaa cgccggacgg gagaaatagt ttttgggcgt gccatgccgc
     1681 ttgattcaaa tcggcaaatc tttcacgagt tgtccgccaa tccacacctt gcggatatga
     1741 tcgggctcgg cgagaagacc gatccggtcg agcggatttt tcgcgagagc gaggaaatcc
     1801 gcgtc
//
LOCUS       DATLMA010000190         1305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_621236, whole genome shotgun sequence.
ACCESSION   DATLMA010000190 DATLMA010000000
VERSION     DATLMA010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621236"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1305)
                     /locus_tag="VNA10_02385"
     CDS             complement(<1..>1305)
                     /locus_tag="VNA10_02385"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HVG36556.1"
                     /translation="SCKFLDSNGSGYTSDAVLCFQNVKALKQGGRNIRLTSNSWGGGG
                     FSQELKNAMADVEALGVVNVCAAGNSGLNADVSPMYPAGYDNRGIISVLASDQNDIGA
                     GFTNYGLFNVDIAAPGVGTLSTVPLCSSPPAPPIAICDASGYKLLSGTSMATPHVSGV
                     LAALAHQNPALTAYEARDIVLDPGSFDALSDPRAQTTSTGGRLNFPKTLANPRLSNPI
                     VLNGFPTLTIGPDVFAAAGSLVNLTANASDPDNDPLRMSWAKTGNTGSQWLFGSMLNS
                     LFPNASGNSVSFTAPSPARTAMASYDASVADGRGGGAHGRDYVSVSPAPSPGLPPSVT
                     LTVTTTDPSTFPVTASVSFPATDPEGGPVSKDLWIGQSNGASGSCCYTSSTTSVQLNG
                     AGVYRFSTTAIDQELNLSTRPSAVVKLGGATGEPPIASANLD"
BASE COUNT          234 a          388 c          456 g          227 t
ORIGIN      
        1 tgtcgagatt ggcgctcgcg atcggcggtt cgcccgtggc gcctccgagt ttgaccaccg
       61 cgctcggcct cgtggagagg ttgagctcct gatcgatggc tgtcgtcgaa aagcggtaga
      121 cgccggcacc gttcagctgg acgctcgtcg tcgagctcgt gtagcagcag ctgccgctgg
      181 cgccattact ctgaccgatc cagagatcct tcgagaccgg acctccctcg ggatcggtcg
      241 cgggaaagct cacggaagcc gtgacgggaa aggtcgaagg atccgtggtc gtgaccgtca
      301 gcgtcaccga aggcggaagg cccggactcg gagccggtga aacagacacg tagtcgcggc
      361 cgtgggcgcc cccaccccgg ccgtccgcca cagaagcgtc gtaggacgcc atcgccgttc
      421 gcgcgggcga cggagcggtg aaggagaccg agttaccgct tgcgttcggg aagagggagt
      481 tgagcatcga gccgaagagc cactgcgatc cggtgttccc ggtcttggcc caggacatgc
      541 ggagcggatc gttgtccgga tcggaggcgt tcgccgtgag gttgaccagg cttcccgcgg
      601 cagcgaatac gtccggcccg atcgtcagag ttgggaagcc gttcagcacg atggggttgg
      661 aaagacgagg atttgcgagg gtcttcggaa agttcaagcg tccaccggtc gaagtggtct
      721 gagccctcgg atcgctcaac gcgtcgaagc ttcccgggtc gaggacgatg tcgcgtgcct
      781 cgtaagcggt gagcgcgggg ttctggtgcg cgagagccgc cagaacgccg gagacgtgcg
      841 gcgtggccat cgaagttccg gagagcagct tgtaaccgct cgcatcgcag atcgcgatcg
      901 gcggagcagg cggagacgag cagagcggga cggtcgagag agtgcccacc cccggcgccg
      961 cgatgtcgac gttgaagagt ccgtagttcg tgaagcccgc gccgatgtcg ttctggtcgg
     1021 aagcgaggac ggagatgatt ccgcggttgt cgtacccggc gggatacatc ggagagacgt
     1081 ctgcattcag tccgctgttt cccgccgcac agacgttcac gacgcccaga gcctcgacgt
     1141 ctgccatcgc gttcttgagc tcctggctga agccgccgcc gccccaggaa ttgctggtca
     1201 ggcggatgtt gcggcctccc tgcttcaacg ccttgacgtt ctggaagcag aggacggcgt
     1261 ccgacgtata gccgcttccg ttcgaatcca ggaacttgca cgaaa
//
LOCUS       DATLMA010000191         1606 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_742990, whole genome shotgun sequence.
ACCESSION   DATLMA010000191 DATLMA010000000
VERSION     DATLMA010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742990"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VNA10_02390"
     CDS             complement(<1..410)
                     /locus_tag="VNA10_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013988489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HVG36557.1"
                     /translation="MTESIRPKYPMGKVGRTFFENVIARHLGARRKDVAVGPASGVDI
                     GVVRLPDGRALLSTTDPIYIVPQYGWERAAWFAFHILASDLTTSGVAPQYITMDWNLP
                     MDIEDDQIETMLQVIDRESKKYGAAIVTGHTGRY"
     gene            complement(407..>1606)
                     /locus_tag="VNA10_02395"
     CDS             complement(407..>1606)
                     /locus_tag="VNA10_02395"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HVG36558.1"
                     /translation="PVDLALEGVVLGTVLGSIPFALLSIVGPATGYPQIAQSRSSFGR
                     RGAYLPAALNWFSTTGWSAVTFILGGLAFSLFLPIPFVVGVAIFAVIQIVVAFYGHNF
                     LHRFEQVMAVILVGVFAAMSVAAVQGATAPVYTASGGLAGFAFMTILAASIPLSWAPY
                     AADFSRYLARDTARRRVFVPAFLGMAVACIWVETIGILLTTSLGSWGDPVLVFAHAFG
                     DRLVVPLLLLLVVNLLAANAPNLYSSGLSLLALDVPVRRGTSVLVGGAIATVLAVLGG
                     TDRVSFYESWLFFVEYWIAPWAAIVLISFFVFRHRGAEPSPDMAPPWRASALAAYVSA
                     VILAVPFMNRAPRFIGPISSALGGVDLSNLVSFAAASLLFYALTSRGERRSQAAAVHP
                     PLAESEP"
BASE COUNT          359 a          490 c          526 g          231 t
ORIGIN      
        1 tcgtagcggc cggtatggcc cgtcacgatt gcggcgccgt atttcttcga ctcgcgatcg
       61 ataacctgga gcatcgtctc gatttggtcg tcttcgatgt ccatgggcag gttccagtcc
      121 atcgtgatat actgcggcgc gacgcccgac gtcgtcaggt ccgaggcgag gatgtgaaag
      181 gcgaaccatg cggcccgttc ccatccgtac tgaggcacga tgtagatcgg gtcggtcgtc
      241 gaaagcagag cgcgcccgtc cggaaggcgc acaacaccga tatccactcc gctcgccggc
      301 ccgacggcaa cgtccttgcg tctcgcgcct aagtggcgcg cgattacgtt ctcgaagaac
      361 gtacgaccca ctttgcccat cggatacttg ggtcgaattg attctgtcat ggttccgact
      421 ccgcaagagg aggatggact gccgcggctt gcgagcgtcg ctccccccgg gacgtgagag
      481 cgtagaagag aagggatgcg gcggcgaaag agacgaggtt gctcaagtcc acgccaccga
      541 gcgcggacga aatcggccca atgaagcgcg gggcccggtt catgaaggga accgcgagga
      601 tcacggcgga gacgtaggct gctagcgcag acgcgcgcca cggtggagcc atatccgggc
      661 tcggctccgc accgcgatgc ctgaaaacga agaacgagat gagtacgatt gcggcccatg
      721 gagcgatcca gtattcgacg aagaagagcc agctctcata gaacgagacc cgatcggtgc
      781 cccccaacac cgcgagcacg gtcgcgatgg ctcctccgac gaggacggac gtcccccgcc
      841 tcaccgggac gtcgagagca agaagggaga gcccgcttga atagaggttc ggggcgttcg
      901 cagccaacag gttcacgacg agcaggagaa gcagcgggac cacgagcctg tcaccaaagg
      961 catgggcgaa tacaagcacg gggtcacccc aggaaccgag ggaggtcgtc aacaggatcc
     1021 cgatcgtctc gacccagatg caggccacgg ccatcccgag aaacgcggga acgaagacgc
     1081 gtcgccgcgc tgtgtcccgt gccagataac gggagaagtc cgccgcataa ggcgcccagc
     1141 tcaatgggat cgaggcggca aggatcgtca tgaatgcgaa tccagccagt ccgccggagg
     1201 ccgtatagac cggcgcggtc gctccttgga ccgcggcgac gctcatcgcg gcgaagacgc
     1261 cgacgaggat cacggccatg acctgctcga accggtgaag gaagttgtgg ccgtagaagg
     1321 ccacgacgat ttggatgact gcaaaaatcg cgacccccac gacgaagggg attggcagga
     1381 agaggctgaa tgcaagaccg cccaagatga acgtgaccgc actccagccc gtcgtcgaga
     1441 accagttcag ggccgccggg aggtacgcac cccggcgtcc aaaggagctc cgcgattggg
     1501 caatctgcgg atagcctgtc gccggaccca cgatgctcag gagggcgaag ggaatcgacc
     1561 cgaggacagt cccgaggacc acgccttcca gcgcgaggtc caccgg
//
LOCUS       DATLMA010000192         2216 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_198474, whole genome shotgun sequence.
ACCESSION   DATLMA010000192 DATLMA010000000
VERSION     DATLMA010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198474"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VNA10_02400"
     CDS             <1..318
                     /locus_tag="VNA10_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HVG36559.1"
                     /translation="QEHEVHVVNVWAEDTVEANLMELLDRKIHMFELVVGELDLILGN
                     LDERRSFEDLMMDIWVLRQAEDRRSALRRLGDSLVRARAQYEHVKDVNEAVLGGAEEA
                     ASA"
     gene            315..1445
                     /locus_tag="VNA10_02405"
     CDS             315..1445
                     /locus_tag="VNA10_02405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36560.1"
                     /translation="MSDASPLQSFVVDALTDLGAVVSPGGSLVWVQAPESVQHDLEVP
                     ANFALTFDAERSREFEAELVAPGSYFLERLIAVVARRGQWDAARCEVAGTEWIPVAVR
                     ESGLGLETGVHSHVDGIEDGLLWLFAFRVTLLSDEKRESFHLIAVSPSDQCAWAVDPN
                     RPDRELIPHRSPGNFVDLEAGYWLAAESLRSITAGEVDRFRTRSLGLLEEEVRRIFGY
                     FDRTIEELRESDPDGSQELLRAVMAERDRRLTEAVERFDPKAGASLCSIRAIQVPTAH
                     LRLDFPNGSRTDVRLDAWSGRLRGLVCSNCGGTGGPWRWSSAEGLRCATCAPTPAGSA
                     RPRGRPPSDTPRRGTRVGEASARSPRGSRARSRGASAGRRRP"
BASE COUNT          337 a          731 c          754 g          394 t
ORIGIN      
        1 caggaacacg aagtccacgt cgtgaacgta tgggccgaag acaccgtcga ggcgaacctg
       61 atggagctcc tcgatcgcaa gatccacatg ttcgagctcg tcgtcggaga actcgatctg
      121 atcctcggga acctcgacga gcgccggtcc ttcgaagatc tgatgatgga catctgggtg
      181 ctccggcagg cagaggaccg acggtccgcg ttgcgccgcc tgggggattc cctcgtccgc
      241 gcgcgcgccc agtacgagca cgtgaaggac gtcaacgaag cggtcctggg cggtgcggag
      301 gaggcggcct ccgcgtgagc gatgcctcgc cgttgcaatc gttcgtcgtc gacgcactca
      361 ccgacctcgg agccgtcgtt tctccgggcg gatcgctcgt atgggtccag gcccccgagt
      421 cggtccagca cgatctcgag gtgcccgcga atttcgcgct gaccttcgac gcggaacgca
      481 gccgggagtt cgaggccgag ctggtcgccc caggcagcta cttcctcgag cgcctcatcg
      541 ccgtcgtcgc tcgtcggggt cagtgggatg cggcgcggtg cgaggtcgcc ggcacggaat
      601 ggattccggt cgcggtccgc gaatccggcc tgggtctgga gaccggggtg cattcgcatg
      661 tggacgggat cgaggacgga ctcctgtggc tcttcgcttt ccgcgtgacg ctcctgtcag
      721 acgagaaacg cgagagcttc catctcatcg cggtctcgcc gtccgaccag tgcgcgtggg
      781 ccgtcgaccc gaatcggccc gaccgggagc tcatcccgca tcgttccccg gggaatttcg
      841 tcgacctcga ggccgggtac tggcttgcgg ccgaatcgct tcgatcgatc accgcaggag
      901 aggtcgaccg gttccgtact cggagcctcg gcctcttgga agaggaggtg cgtcggatct
      961 tcggatactt cgaccggacg atcgaagagc tccgcgaatc cgatccggat ggatctcaag
     1021 agctgctccg cgcggtcatg gcggagcggg atcgccgcct caccgaagcc gtggagcggt
     1081 tcgatcccaa ggccggtgcc tccttgtgtt cgatccgggc catccaggtt ccgaccgctc
     1141 acctccgact cgacttcccg aacggatcga ggacggacgt gcggctcgac gcgtggtccg
     1201 gtcggttgcg ggggctcgtc tgctcgaatt gcggcgggac cggcggaccg tggcgctggt
     1261 cgtccgcgga aggattgcga tgcgcgacgt gcgcgcctac gccagccggg tccgctcgac
     1321 ctcgaggccg tccgccgtcg gatactcctc gacgaggaac gcgggtcggc gaagcttcgg
     1381 cgcgatctcc tcgaggatcc agggcgcgat ctcgaggcgc ttccgcgggc cgtcgacgcc
     1441 catgagatcg ggcgggacgt ggtaggtcgc ctcgaggacc ttccgcaacg gctccaggtc
     1501 ggatccttcg acgatcccct tcagaagggt cccgtccttg gtgatgacgt cccagggatg
     1561 agcaacggtc tccgcgcgcc gcttgatgcg tgaccgcagc tgccatccgt ctttgtagcc
     1621 gctcgtgcag tagtggaccg tcgtccgcca tttccgtccg aggatgcgca gggcggccgg
     1681 gtccgcgcct ttgacgccgt acgagagttc gtgcttcatc tcgtacccgt ggaccttcat
     1741 ccgcgggaag ttcgcctcgg agaactccag ctcgttcagg ttcacgaagg cgagcccctc
     1801 gtcccccgcc cattcgatga ggcggaccag gtcggcctcc cgctccggga ccaggggcac
     1861 ctcgatcccg acgatcaggc cgagcgaccg ggcgaggcgc gacgcggcga cgaaggcgct
     1921 cccatgggcc cgggaccaga ggccgggcgg gacgtggaag cggatctcgt cgaggccggc
     1981 ggccgcgagc atccggatct tctccgcatc cgtcgacatc gtgtacagat gggtgtggaa
     2041 ccggggtccg aactcgtgct taaggaggcg gatgtaatgg cacgtgcgct cgacggcgtc
     2101 gagcgggtct ccccccgtga tcccggcacc ggtcgcctgg atcgcgtggg cctcctccaa
     2161 gacgtcctcg tcccgcgtca cccgtttttc gtccgcgaat acgacgtcct tgtaca
//
LOCUS       DATLMA010000193         1330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_501101, whole genome shotgun sequence.
ACCESSION   DATLMA010000193 DATLMA010000000
VERSION     DATLMA010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501101"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VNA10_02410"
     CDS             <1..475
                     /locus_tag="VNA10_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36561.1"
                     /translation="ARRSDLSTIHRLYRTHTRRMLAWTERPERALEWAVIRTRDYLEK
                     YRIIQRGGNAVGYLRTRPDDGITMEEVVAPNAMDFRAAVALMEAKAEAGIATVNWITA
                     RSDAARFRSLGYTVDGPFPDTTMAISLVKEIRTNDLPRRFGGTSGKFVQYPTDDF"
     gene            637..>1330
                     /locus_tag="VNA10_02415"
     CDS             637..>1330
                     /locus_tag="VNA10_02415"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HVG36562.1"
                     /translation="MKSKVVLLGDGGVGKTSLVRRFVVDHYSDDYITTVGTKVSKRSL
                     NLGSPLAEVEMVLQIWDVLGQKGYSGVQETAIKGAQGVLLVYDATNDESRRALEDYWI
                     PAVWRLAGRIPTVFAGNKSDLVPDRVWAEEYLYFLTQKYSCPGILTSAKTGDRVELSF
                     KALGEQILQAAGHPIRRIALVTPPQEPVDRLIRVTDKIMTDFCYHMGGVETGMPIVKR
                     QLGLAGLDVRAPT"
BASE COUNT          261 a          400 c          439 g          230 t
ORIGIN      
        1 cgcgaggcgt tcggacctat cgacgatcca tcgcctctat cgaacccata cgcggcgcat
       61 gcttgcctgg accgaacgac cggagcgggc tctcgaatgg gccgtcatcc ggacccgcga
      121 ctacctcgag aaatatcgaa tcatccagcg aggcggcaat gcggtggggt accttcgcac
      181 gcgcccggac gacgggatca cgatggaaga ggtagtcgcg ccgaacgcta tggacttccg
      241 agccgcggtc gcgctgatgg aggcgaaggc ggaggcggga atcgcaacgg tcaactggat
      301 caccgcgcgc tccgatgccg cgcggttccg aagcctcgga tacacggtcg acggtccctt
      361 tcccgacacc acgatggcga tctccctcgt gaaggagatt cggacaaatg atttgccgcg
      421 gcgcttcgga ggaacttccg gcaagttcgt gcagtatccg acggacgact tctgatcatg
      481 ggtcgaatga cggcgccgtg gaaggcaagg gaatcgagcg cgccatcgcg tgtgtgtgtc
      541 cctatcggca ttaagtgctc tcgatgagaa ccacagggaa cggttcaaga agggggctcg
      601 gggattagcc ttcgtccttc gatgccgcga gagccgatga agtcgaaggt cgtcctcctg
      661 ggcgatggcg gcgtggggaa gacctcgctc gtccgtcgat tcgtcgtcga ccactattcg
      721 gacgactaca tcacgaccgt tgggacgaaa gtctcgaagc ggagcctgaa cctcggatcg
      781 ccgctcgccg aggtcgagat ggtcctgcag atctgggacg tcctcgggca gaaagggtac
      841 agcggggtgc aggagaccgc gatcaaaggc gcccaggggg tcttgctcgt gtacgacgcc
      901 acgaacgacg agagccgccg ggccctcgag gactattgga tccccgccgt gtggcggctc
      961 gcaggtcgaa tcccaacggt cttcgcaggg aacaagtccg acctcgtccc ggatcgggtc
     1021 tgggccgagg agtacctcta cttcttgact cagaagtact catgccccgg aatcctgacg
     1081 agcgcgaaga cgggggaccg ggtcgagttg tccttcaagg cgctcgggga gcagatcctg
     1141 caggcagccg gccatccgat ccgacggatc gcgctcgtga cgccccccca ggagcccgtc
     1201 gatcgcctga ttcgtgtaac ggacaagatc atgacggact tttgctacca catgggtggc
     1261 gtggagacgg gcatgccgat cgtaaagcgt cagctcggtc tcgccggcct cgatgtccgt
     1321 gcgccaacga
//
LOCUS       DATLMA010000194         1719 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_564520, whole genome shotgun sequence.
ACCESSION   DATLMA010000194 DATLMA010000000
VERSION     DATLMA010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_564520"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..200
                     /locus_tag="VNA10_02420"
     CDS             51..200
                     /locus_tag="VNA10_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015504367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L40e"
                     /protein_id="HVG36563.1"
                     /translation="MARFPEAERRRLHKMICMQCYARNAMRATRCRKCGSRELRPKAK
                     EARKE"
     gene            279..1256
                     /locus_tag="VNA10_02425"
     CDS             279..1256
                     /locus_tag="VNA10_02425"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HVG36564.1"
                     /translation="MAGEQVVRVDELSRHFGDKVAVDRVSFDIARSEVFGFLGPNGAG
                     KTTTIKMLTTLLPPTSGRATVLGHDLKTEGRKIRTQIGVVQQQDSFDQGLNVETSMDI
                     YGLIWNVPKAERRRRIDELIGHFEMEEFRKMPTVDLSAGQRRRLQVAREFIHDMDLLF
                     LDEPTVGLDPIVRRSVLDYLKQRVREGLTIFFTTHILEEAEYLCNRIAVINQGRIVQI
                     DTPENLKRRFGSAKAVEFKLLQGTSPEMASALSSSPSVSRFGRDEGSGAYRVTTTRPE
                     SVIPEIYRLADRLSLTVSSIYISETTLEDAFINLVTEDEKAVANGGRSA"
     gene            1253..>1719
                     /locus_tag="VNA10_02430"
     CDS             1253..>1719
                     /locus_tag="VNA10_02430"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36565.1"
                     /translation="MNIYLRLVYRNIRANLDRASLFFELIFPLFFIFVQGFGLNGIVP
                     PFDVGNGRVISYSLFLAAGAVTLTVINGGTNAGTQLWFDRKNGMFEQILMSPFTRAQY
                     ILSIILATMILGLGASSLVFLIAFPIIGSSLSVTPFGGALIFLAIFLGTVFFGT"
BASE COUNT          329 a          536 c          526 g          328 t
ORIGIN      
        1 ccgatcgtcc cggcgaagcc ttcataagcc gccggcggtt cgcggccatg atggcccgct
       61 tcccggaggc cgagcgacgg cgactgcaca agatgatctg catgcagtgc tacgcccgca
      121 acgcgatgcg cgcgacccgg tgtcggaagt gcggcagccg ggagctgcgc ccgaaggcta
      181 aagaggcacg gaaggagtag gcgcccgctc aggaatggaa tcccggtagc gagggggtct
      241 tcgaatccgg gtttcgatcg acgagaggtt caacggtcat ggcaggtgag caggtcgtcc
      301 gcgtcgatga attgtcgcgg cacttcggcg acaaggtcgc ggtcgatcgc gtctcattcg
      361 acatcgcgcg ttcggaggtg ttcggattcc tcggcccgaa cggagccggg aagaccacga
      421 cgatcaagat gctcacgacc ctcctccctc cgacgtcggg ccgcgccacc gtgctcggac
      481 atgacctgaa gaccgaaggt cgcaagattc ggacgcagat cggagtcgtc cagcaacagg
      541 acagcttcga tcagggcttg aacgtcgaga ccagcatgga tatttacggt ctcatctgga
      601 acgtcccgaa ggccgagcgc cgccgccgga tcgacgagct gatcggccac ttcgagatgg
      661 aggagttccg aaagatgccc acggtggacc tgtccgccgg ccagcgtcgc aggctccaag
      721 tcgctcgaga gttcatccac gacatggacc tcctgttcct cgacgagccc acggtcggat
      781 tggatccgat cgtgcgtcga agcgtcctgg actatctgaa gcaacgcgtg cgagagggcc
      841 tcacgatttt cttcacgacc cacatcctcg aagaggccga gtacctctgc aaccggatcg
      901 cggtgatcaa ccagggtcgg attgtgcaga tcgacacccc ggaaaacctg aagcggcgat
      961 tcgggagcgc gaaggccgtc gaattcaagc tcctccaagg gacctcgccg gagatggcct
     1021 cggcgctgtc gtcctcgccg tccgtcagcc ggttcggacg ggatgaggga tccggcgcat
     1081 accgggtgac gacgacgcgg ccggagtccg tgattccgga gatctaccgc ctcgcagacc
     1141 gactcagcct gacggtgtcg tcgatctaca tctcggagac cacgctcgag gacgcgttca
     1201 ttaacctggt gaccgaggac gaaaaggcgg ttgcgaacgg aggtcgatcc gcatgaacat
     1261 ctacttgcgt ctggtctacc ggaacatccg agcgaacctc gaccgcgctt ccctgttctt
     1321 cgagctgatc tttccgttgt tcttcatctt cgtccaggga ttcgggctga atggaatcgt
     1381 cccacccttc gatgtcggga acggacgggt gatcagctac tcactattcc tcgcggcggg
     1441 cgccgtgacg ctgaccgtca tcaacggggg tacgaacgcg gggacgcagc tctggttcga
     1501 ccggaagaac ggaatgttcg aacagattct gatgagtcct ttcaccaggg cccagtacat
     1561 cctcagcatc atcctcgcaa ccatgatcct cggccttggc gcctcttctc ttgtcttcct
     1621 gattgccttt ccaatcatcg ggagcagcct gtcggtcacc cccttcgggg gggccctgat
     1681 cttcctcgcc attttcctcg gcactgtctt cttcgggac
//
LOCUS       DATLMA010000195         1245 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_262075, whole genome shotgun sequence.
ACCESSION   DATLMA010000195 DATLMA010000000
VERSION     DATLMA010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262075"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..970
                     /locus_tag="VNA10_02435"
     CDS             <1..970
                     /locus_tag="VNA10_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG36566.1"
                     /translation="VAGVLIEELMKHHVTCVILDPHGEYASLKEKGKHGEGSGRFHVE
                     PRAYADIIQVFSPDTKINPGSRPLKFTLSNLDARDILSLTGSAKVRTHLTALRKALDL
                     LRQATKDYTIRDIIRVLEREEDPQNASLIDELEYLSEVEIFAKEGTRIDELVIKSKTT
                     IINLKGVPPDIQELVVNRLATAMFELRKVGRIPPMMLVVEESHNFCPQVGQAASSKVF
                     RTLASEGRKFGLGLVVITQRAAKVDKNVLSQCNTQIILKVTNPNDLKAIIASVEGLTT
                     AMAEEISRLPIGVAIMTGGGLQMPLMVEVRPRETRHGGESVKVIED"
     gene            1032..>1245
                     /locus_tag="VNA10_02440"
     CDS             1032..>1245
                     /locus_tag="VNA10_02440"
                     /inference="COORDINATES: protein motif:HMM:NF015943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF357 domain-containing protein"
                     /protein_id="HVG36567.1"
                     /translation="MDLRALVDKDVTLTERALAKIKVAPPPRSHLRKVAEDFLGMARA
                     YFDDAKHFRERGELEKALANVNYAHGW"
BASE COUNT          262 a          378 c          405 g          200 t
ORIGIN      
        1 cgtcgccggc gtgttgatcg aggagctgat gaagcatcac gtgacttgcg tgatcctcga
       61 tccgcacggc gaatacgcgt ccttgaagga gaaggggaag cacggggagg gctccggtcg
      121 cttccacgtc gagccccgcg cctacgccga catcatccag gtgttctccc cggacacgaa
      181 gatcaatccc ggaagccgcc cgctcaagtt cacgttgagc aacctcgatg cgagggacat
      241 cctttcgctc actgggtccg cgaaggtccg gacgcacctc accgcgctcc gaaaggccct
      301 cgatctgctc cgccaagcga cgaaggatta cacgatccga gatatcatcc gcgtcctgga
      361 gcgggaagaa gacccgcaga atgcatcgtt gatcgacgag ttggaatatc tgagcgaggt
      421 cgagatcttc gcgaaggaag gcacgcggat cgacgaactc gtaatcaaga gcaagacgac
      481 gatcatcaac ctgaaaggtg tcccgccgga catccaggag ctcgtcgtga accggctcgc
      541 gacggcgatg ttcgagctgc ggaaggtcgg acggatcccg ccgatgatgc tcgtcgtcga
      601 ggagtcccac aacttctgtc cccaggtcgg ccaggcggcg tcgtcgaagg tattccgaac
      661 gctcgcctcg gaaggccgga agttcggtct cgggctcgtc gtcatcacgc agcgggccgc
      721 gaaggtcgac aagaacgtcc tgagccagtg caacacgcaa atcatcctga aagtcacgaa
      781 cccgaacgac ctgaaggcga tcatcgcgag cgtcgagggg ctgacgaccg cgatggccga
      841 ggaaatctcc cgcctcccga tcggcgtggc gatcatgacc ggtggcggac tccagatgcc
      901 gctcatggtc gaagtgcgtc cgcgggagac ccgtcacggt ggagagagtg tcaaggtcat
      961 cgaggattga ccgacggggg cgcgcaggcc gggagcggga aaggttttag cgcggcgccc
     1021 gttggacagg tgtggacctt cgcgcgttgg tcgacaagga tgtcaccctc acggagcggg
     1081 cactcgcgaa gatcaaggtg gccccgcctc cgcgctccca cctccggaag gtggcggagg
     1141 acttcctcgg aatggcccgc gcctatttcg atgacgcgaa acacttccgc gagcgaggcg
     1201 aactcgagaa ggccctggcg aacgtgaatt acgcccatgg gtggc
//
LOCUS       DATLMA010000196         1631 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_743678, whole genome shotgun sequence.
ACCESSION   DATLMA010000196 DATLMA010000000
VERSION     DATLMA010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743678"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1465
                     /locus_tag="VNA10_02445"
     CDS             <1..1465
                     /locus_tag="VNA10_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014121878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HVG36568.1"
                     /translation="FIPDAALTGPLLGRIVMEDETDLANFALEYAMKKGVSYAEARYE
                     HQEQENFILKNGVLDALYVGQDRGVGVRVLVNGALGFAATNLRTKSDVRAIVDDAIKG
                     AKASRRKTKITFAHEDAITMNWSIPEQRKLADVSVEEKIAEVQSVDRDLMALGLKIPA
                     RYFQFSDNRIVKFFANSEGSRIRSYSPRLRVFYFLTVTQGGQVEQTYRNYGWSGGWEG
                     IAEWDLRKRVIDEAKSMQRSLVEGKKSPEGKMDLVAGPQVAGIASHESCGHPTEADRV
                     LGREASQAGKSFIPPDGIGMRVGSEVVNVVDDPTVEHSIAYYRTDDEGVKARRRYLYK
                     EGRVTEFLQNRETAAAMHTRSNGAARAVNYNVEAIVRMANTFVEPKDYSVDELLEGVK
                     FGVYMKSFMEWNIDDKRYNAKYAGREAYLVENGEVKHPVRNTIIELTTPAFWSAVDAV
                     GKDLDFEAGFCGKSDPGQALDASLGGPTIRLRNVYLR"
BASE COUNT          332 a          503 c          537 g          259 t
ORIGIN      
        1 cttcattccc gacgccgctc tcacggggcc gcttttgggg cggatcgtca tggaagacga
       61 aacggatctc gcgaattttg cgctcgagta tgcgatgaag aagggcgtgt cgtacgccga
      121 agcccgatat gaacaccagg agcaagagaa cttcatcctg aagaacggag tcctcgacgc
      181 gctctacgtc ggccaggacc gcggcgtggg cgtgcgggtc ctcgtcaacg gtgccctcgg
      241 gttcgcggcc acgaacctgc gtacgaagtc cgacgttcgt gccatcgtag acgacgcgat
      301 caagggcgcc aaggcctcgc ggcgcaagac gaagatcacc ttcgcgcacg aggacgcgat
      361 caccatgaac tggtcgatcc cggaacagcg aaaactcgcc gacgtctccg tggaggagaa
      421 gatcgcggag gtccagtcgg tcgaccggga cctcatggcg ctcggactca agatccccgc
      481 gcgatacttc caattcagcg acaaccgcat cgttaaattt ttcgcgaact cggaaggctc
      541 ccgcatccgc tcgtacagtc cgcgcctccg ggtgttctac ttcctcaccg tcacgcaagg
      601 cggccaggtc gagcagacgt accgcaacta cgggtggtcc ggcggctggg aaggaatcgc
      661 ggagtgggat ctccggaagc gcgtcatcga tgaagccaag tcgatgcaac gatccctcgt
      721 ggaaggcaag aagtccccgg aggggaagat ggacctcgtc gcgggaccgc aagtggccgg
      781 catcgcctcg cacgaatcgt gcggccaccc gaccgaggcc gaccgcgtcc tcggacggga
      841 agcgagccag gccggcaagt ccttcatccc gccggacggg atcggcatgc gggtgggttc
      901 ggaggtcgtg aacgtcgtcg acgatccgac ggtcgagcat tcgatcgcct actatcgtac
      961 ggacgatgag ggcgtcaagg cccgccgccg gtacctgtac aaagagggcc gcgtcacgga
     1021 gttcctccag aaccgcgaga cggccgcggc gatgcacacg cgcagcaacg gcgctgcgcg
     1081 cgcggtgaac tacaatgtcg aggcgatcgt gcggatggcc aacacgttcg tcgagccgaa
     1141 agactactcc gtggacgagc tcctcgaggg cgtgaagttc ggcgtctaca tgaagagctt
     1201 catggagtgg aacatcgacg acaaacgcta caacgcgaag tacgcgggcc gcgaggcgta
     1261 tctcgtcgag aacggggagg tcaagcaccc ggtccgaaac acgatcatcg agctcacgac
     1321 gcccgccttc tggtccgcgg tcgatgcggt cgggaaagat ctcgacttcg aggcgggctt
     1381 ctgcggcaag tcggatccgg gacaggcgct cgatgcgagc ctcggcgggc cgacgatccg
     1441 cctccggaac gtgtacctga ggtgatccga tggaagacgt ctcctcccga atcgtcgaga
     1501 aggcgatcgg cctcggctgc caggacgcga tcgccgacgt cgtcgcgaat cgctcgtacc
     1561 agatccggtt cgcgcagaac gaggcggtga tcagcaaccg gtggcgggag tcgaccgcgt
     1621 ccgtgttctt t
//
LOCUS       DATLMA010000197         2391 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_743845, whole genome shotgun sequence.
ACCESSION   DATLMA010000197 DATLMA010000000
VERSION     DATLMA010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743845"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VNA10_02450"
     CDS             <1..267
                     /locus_tag="VNA10_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008441501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HVG36569.1"
                     /translation="FADEFRSPGHVPLLNAVDPLLVDRRGHTELTTALMVMAGLAPTA
                     TICEMMADDGRALSKQDAKAYARARNLVFLEGQDIVRAWRSWSV"
     gene            267..755
                     /locus_tag="VNA10_02455"
     CDS             267..755
                     /locus_tag="VNA10_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HVG36570.1"
                     /translation="MATGVFDLLHPGHVYFLREARALGDELWVVVARDSTARKFKHEP
                     IMPEAARFQMVEALKPVDRAVLGHEGNIYDILDEIRPDIIAIGYDQVHSEERILAECR
                     KRGLATKVLRLPKFEGDLVGTRKIVRKVAEWLALQERLTKVERGTARRAADPPRRRKR
                     NA"
     gene            752..1225
                     /gene="ribC"
                     /locus_tag="VNA10_02460"
     CDS             752..1225
                     /gene="ribC"
                     /locus_tag="VNA10_02460"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014585867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004746 - riboflavin synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HVG36571.1"
                     /translation="MKRIGIVDTSFSRYDMASAAIDELRKQGGGFTVERYTVPGIKDL
                     AAGARILFDRGCDLVLALGMVGRQPVDKDCALAADFGLQAVQAQVGKHILGVMVHEEE
                     TADEAELAGLFDRRTREHALNAYDLLLRPDAIRARAGTGQREGFADAGPLKVTRT"
     gene            1222..1629
                     /gene="ribH"
                     /locus_tag="VNA10_02465"
     CDS             1222..1629
                     /gene="ribH"
                     /locus_tag="VNA10_02465"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:TIGR00114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HVG36572.1"
                     /translation="MRLAIVASEFNREITDVMVKRALARADARGVRVTSVVRVPGVFE
                     IPLAIERLLERADVDAAVAIGAVIKGETLHDEALMAAVPKALLDIERATRKPVGLGIT
                     GPGMTDDQAMARVDKGAEAVDVALAMHELLQGL"
     gene            1708..2067
                     /locus_tag="VNA10_02470"
     CDS             1708..2067
                     /locus_tag="VNA10_02470"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HVG36573.1"
                     /translation="MVDTTALESLLREVEQNEGVQEAMLVSLAGTYLAGSFPRGVHVD
                     TFGSMFAVLVGSAETVTAEAKDSLESVVIHSKANKYLIIHAGRKALLVMRLPPSADPL
                     KTKAVVEKYIPRIEEHL"
     gene            complement(2068..>2391)
                     /locus_tag="VNA10_02475"
     CDS             complement(2068..>2391)
                     /locus_tag="VNA10_02475"
                     /inference="COORDINATES: protein motif:HMM:NF024660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP-associated domain-containing protein"
                     /protein_id="HVG36574.1"
                     /translation="PAAVAQAAFPAYETCNGRTLRRGNVRARALARERKLGETGGSDS
                     HFLDEVAKAVTAVDTGALRVDDLLQVLAQGHTSAQGLDRGPAATARYVTKAVGEWMLR
                     GMRRI"
BASE COUNT          420 a          791 c          799 g          381 t
ORIGIN      
        1 ttcgccgacg aattccggtc gccaggccac gtgccgctct tgaacgcggt ggatccgctc
       61 ctcgtcgatc gacggggcca cacggaactc accacggccc tcatggtcat ggccggactc
      121 gcgcccaccg cgaccatctg cgaaatgatg gcggacgacg gacgagctct ctcgaagcaa
      181 gatgcaaagg catatgctcg ggcgaggaat ctcgtgttcc tggaagggca ggacatcgtc
      241 cgagcgtggc gttcgtggtc cgtgtaatgg cgacgggggt cttcgatctc ctccatcccg
      301 gtcatgtgta tttcctccgc gaggcccgag cgctcggcga cgaactctgg gtcgtcgtcg
      361 cgagggacag caccgcgcgg aagttcaagc acgagccgat tatgcccgag gcggcccggt
      421 tccagatggt cgaggccctc aagccggtcg accgcgcggt cctgggccat gagggcaaca
      481 tctacgacat cctcgacgag atccggccgg acatcatcgc gatcggatac gaccaggtgc
      541 acagcgagga acggatcctc gcggaatgcc gcaagcgcgg cctcgcgacg aaggtcctcc
      601 ggctcccgaa gttcgaaggc gacctcgtcg gcacccggaa gatcgtgagg aaggtggccg
      661 aatggctcgc gctccaagaa agactcacca aggtcgaacg gggaaccgct cggcgcgccg
      721 cggatccgcc tcggcggcga aagcggaacg cttgaaacgg atcgggatcg tcgacacatc
      781 gttctcccga tacgacatgg cgtccgccgc gatcgacgaa ctccggaagc agggcggcgg
      841 cttcacggtc gagcggtata cggtccccgg catcaaggac ctcgcggccg gtgcgcggat
      901 cctcttcgac cgcggttgtg atctcgtcct tgcgctcggc atggtcggac gacagccggt
      961 cgacaaggat tgcgccctcg cggccgactt cggcctccaa gcggtgcagg cccaggtggg
     1021 caagcacatc ctcggcgtca tggtgcacga ggaggagacc gcggacgagg ccgagctcgc
     1081 gggcctgttc gaccgacgaa cccgcgagca cgcgctgaac gcgtacgatc tcctgctccg
     1141 accggacgcg attcgggcgc gagccgggac cggtcagcgg gaaggattcg ccgacgcagg
     1201 cccactcaag gtgacgcgga cgtgagactc gcgatcgtcg cctcggaatt caaccgcgag
     1261 atcacggatg tgatggtgaa gcgagccctg gcccgggccg acgcgcgcgg cgtccgcgtg
     1321 acgtcggtcg tgcgcgtgcc cggcgtcttc gagattccgc tcgccatcga gcggcttctg
     1381 gagcgtgcgg acgtcgatgc ggcggtcgcg atcggcgcgg tgatcaaagg cgagacgctg
     1441 cacgacgagg ccctcatggc cgcggtgccg aaggcgctcc tcgacatcga gcgtgcgacg
     1501 cgcaagccgg tcggcctcgg catcacgggt ccggggatga ccgacgatca ggcaatggcc
     1561 cgcgtcgaca agggcgccga ggccgtcgac gtggccctcg cgatgcacga gttgctccag
     1621 ggtctgtgac gattttcacc ttgagaccca ggccggaaag gtttaatccg gcaaccgttc
     1681 catccgggcc gagtcggagc gtacgccatg gtcgacacga ccgccctcga gtcccttctc
     1741 cgcgaagtcg agcagaacga gggcgtgcaa gaggcgatgc tcgtttcgtt ggcgggcacg
     1801 taccttgcgg gcagcttccc ccgcggtgtc cacgtggaca cattcggatc gatgttcgcg
     1861 gtcctcgttg gctccgccga gacggtgacc gcggaggcca aggactcgct tgagtccgtc
     1921 gtgatccatt cgaaggcgaa caagtacctc atcatccacg cgggccgcaa ggccctgctc
     1981 gtgatgcgtc tcccgccgtc cgcggatccg ctgaagacga aagccgtggt cgagaagtac
     2041 atcccccgga tcgaggaaca tctctgacta gatccgtcgc atcccgcgga gcatccactc
     2101 gccgactgcc ttcgtgacat atcgggcggt cgccgcggga ccgcgatcga gtccctgcgc
     2161 cgatgtatgg ccctgagcga gaacctggag caaatcgtcg acccgcaagg ccccggtatc
     2221 gacggccgtt acggccttcg cgacctcatc gaggaagtgg ctgtcgctcc ctcccgtttc
     2281 cccgagctta cgttccctgg ccaacgcacg ggcacggaca ttcccccgtc ggagcgtccg
     2341 gccgttgcag gtctcgtacg ccgggaacgc ggcctgagcg accgccgcgg g
//
LOCUS       DATLMA010000198         1356 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_501721, whole genome shotgun sequence.
ACCESSION   DATLMA010000198 DATLMA010000000
VERSION     DATLMA010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501721"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..632
                     /locus_tag="VNA10_02480"
     CDS             201..632
                     /locus_tag="VNA10_02480"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HVG36575.1"
                     /translation="MRASFHQLKWTLFAVIIVFILGFVFFSGSNGGGSTSSQVVAKVG
                     GDQVSAVEFDRVYQNQVKRYRELYKGSFSPELARALDLPRQVLDGMIERKLRLEAAKR
                     LKLTVTDEELARAIASIPELQENGQFIGAQRYSERLRLAGM"
     gene            654..>1356
                     /locus_tag="VNA10_02485"
     CDS             654..>1356
                     /locus_tag="VNA10_02485"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HVG36576.1"
                     /translation="MREDLLVEKYRALVKASVAIPEADVRKEFSAKNDKATIEYILIP
                     SSRLESSVEPSEGDLKAYYEKNRERYRSPEQRRANYLLVDKLKVRAKVPISDAEIRAE
                     YEAKKASFAVPEQVNASHILVSVDPKGGPEGDAKARAKAEALTARAKAGEDFAKLATE
                     NTDDPNGKENGGQLPPFGHGQMVPEFEKAAFDMKPGEIRGPVKTSYGYHVIKLTAKTA
                     AGTRTLDEVRSKISGD"
BASE COUNT          294 a          399 c          441 g          222 t
ORIGIN      
        1 ggcgacaacc acgatcagga tgccccaggt cgcgatcttt cggatcggga tgatgaacca
       61 gtcgaggtcc gctcctacga gcttccgtct ccgcataact ttcgtgattg gcgagactta
      121 ccctgtctgc ttatagcaca ttcgccggat gccctgttat agtcgccggt tccaaaaagg
      181 agcctcgaat gctcaaaacc atgcgcgcca gcttccacca gctgaagtgg acgctgttcg
      241 ccgtgatcat cgttttcatc ctcggattcg tcttcttttc cggctcgaac gggggaggga
      301 gcacctcgag ccaggtcgtc gccaaagtgg gcggcgatca ggtctcggcg gtcgagttcg
      361 accgcgttta ccagaaccag gtcaagagat accgtgagct ttacaaaggc agtttttcgc
      421 cggagctcgc gcgggcgctc gacctgccgc ggcaggtcct ggacgggatg atcgagcgga
      481 aactgcggct cgaagcggcg aagcggctga agctcacggt caccgacgaa gagctcgccc
      541 gcgcgattgc gtcgattccg gaactccagg agaacggcca gttcatcgga gcgcagcgtt
      601 acagcgaacg gctgcggctg gcggggatgt agccggagac gttcgaggaa ggggtgcgcg
      661 aggacctgct ggtcgagaag taccgagctc tcgtcaaggc gagcgtcgcc atcccggagg
      721 cggatgtccg aaaggaattc tcggcgaaga acgacaaggc gacgatcgag tacatcctga
      781 ttccgtcgag ccggctcgag agctcggtcg agccgtcgga aggcgatctg aaggcgtact
      841 acgaaaagaa ccgcgagcga tatcggtccc ccgagcagcg gcgcgccaac tacctgctcg
      901 tcgacaagct gaaggtccgc gcgaaggtgc cgatctccga cgccgagatt cgcgcggagt
      961 acgaagccaa gaaggcgtcc ttcgcggtcc ccgagcaggt gaacgcttcc cacatcctgg
     1021 tctcggtcga tccgaaggga ggaccggagg gagacgcgaa ggccagagcg aaagccgagg
     1081 cgctcaccgc gcgcgcgaaa gcgggcgagg acttcgcgaa gctcgccacc gaaaacaccg
     1141 acgacccgaa cggcaaggaa aatgggggcc agctccctcc gttcggtcac ggtcagatgg
     1201 ttcccgaatt cgagaaagcc gctttcgaca tgaagccggg tgagatccgc ggacccgtga
     1261 aaacgagcta cgggtaccac gtgatcaagc tgaccgcgaa gacggccgcc gggacgcgaa
     1321 ctctcgacga ggtgcgttcg aaaatttcgg gagatc
//
LOCUS       DATLMA010000199         1720 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_862547, whole genome shotgun sequence.
ACCESSION   DATLMA010000199 DATLMA010000000
VERSION     DATLMA010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_862547"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..637
                     /locus_tag="VNA10_02490"
     CDS             266..637
                     /locus_tag="VNA10_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HVG36577.1"
                     /translation="MVLESYVPVVIFALVALLFPLGTFFATRLFRPDHPTPLKDLTYE
                     CGEVPEGVAQIQFHFQYYMFALIFVIFDVAAIFLLLWAFAWGGLLNSVSPVAKFSIFL
                     FLGIMFVATQYALKKEEVIQI"
     gene            634..1170
                     /locus_tag="VNA10_02495"
     CDS             634..1170
                     /locus_tag="VNA10_02495"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HVG36578.1"
                     /translation="MSAIVTSSPAITGRSVPGAEKEVLAQLKVAFGAKLKDAKVVRER
                     LVEIVIDRAEIVPVCTYLKDTLGFEHLSCVTAVDWKDHFESIYHIENYYNGCMVQVNA
                     QIPYDDPKIASLTGLWHAADFLEREMWDLMGVEYTGHPNLTRILLPEDFKFHPLRKEF
                     AQEVDRQYITRRKLRGGK"
     gene            1170..>1720
                     /locus_tag="VNA10_02500"
     CDS             1170..>1720
                     /locus_tag="VNA10_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HVG36579.1"
                     /translation="MPEFWINMGPQHPMTHGLWNMKVKVDGETVTDAKPEIGYLHRGY
                     EKIMEVREFQKNVVLTDRLCYVSSITWSHAYCLAVEKMMGIETPERGQWIRVVALELQ
                     RIASHLMWLAAYGPDLGLLTGLLWALRERELFLDLIQLMSGARMNQNYPRVGGVRNDL
                     PDNFEAMCRRSIEHFLEKVDNEY"
BASE COUNT          325 a          522 c          544 g          329 t
ORIGIN      
        1 acccgcacgc cgagtggaga aaaggagggc acgtttcgct cgcgaagaat tgcccgaatc
       61 gaaggggcgg cgagttggag cagcaactcc gcgactcgaa ggcggagaag gacttcggaa
      121 ctgggggctg acgcgctagc ggacggtgcc cagctccagc ggtttctatc cggcagaggg
      181 gtccgttttc ggatatttct cggattggtg cgtctcgggt catagcgaga ggtttaatag
      241 cccgaccaat tttccagcgt tggacatggt gctggaaagc tacgtgcccg tcgtgatttt
      301 tgctctcgtt gccctgctgt ttccgctcgg cacgttcttc gccacccggc tgttccgacc
      361 tgaccatccg acgccgctga aggacctcac gtatgagtgc ggcgaggttc cggaaggggt
      421 ggcgcagatc cagtttcact tccagtatta catgttcgcg ctgatcttcg tgatcttcga
      481 cgtcgccgcg atcttcctcc tcctctgggc cttcgcgtgg ggcggcctcc tgaactcggt
      541 atcgccggtg gccaagttct cgatcttcct gttcctcggg atcatgttcg tcgccacgca
      601 atacgcgctc aagaaggagg aggtcatcca gatatgagcg cgatcgtcac gtcctcaccg
      661 gcgatcacgg gtcggtcggt gcccggggcc gagaaggagg tcctcgccca gctgaaggtc
      721 gccttcggtg cgaagctgaa ggacgcgaag gtcgtccgcg agcgcctcgt cgagatcgtg
      781 atcgaccggg ccgagatcgt cccggtgtgc acgtacctga aggacacgct cggcttcgag
      841 catctctcgt gcgtcaccgc ggtcgattgg aaggaccatt tcgagagcat ctaccacatc
      901 gagaactact acaacggctg catggtccag gtgaacgcgc agattccgta cgacgacccg
      961 aagatcgcca gcctgacggg cctctggcac gccgcggact tcctcgagcg ggagatgtgg
     1021 gacctgatgg gcgtcgaata cacgggccat ccgaacctca cgcgcatcct gttgccggag
     1081 gacttcaagt tccatccgct ccggaaggag ttcgctcagg aggtcgaccg ccagtacatc
     1141 acgcggcgca aactccgagg gggcaagtga tgccggagtt ctggatcaac atggggccgc
     1201 aacaccccat gacccacggc ctctggaaca tgaaggtcaa ggtcgacggg gagacggtca
     1261 ccgacgcaaa gccggagatt ggctacctcc accgcggcta cgagaagatc atggaggtcc
     1321 gcgagttcca gaagaacgtc gtcttgacgg accgcctctg ctacgtctct tcgatcacgt
     1381 ggtcccacgc gtactgcctc gcggtcgaga agatgatggg gatcgagacc ccggagcggg
     1441 gccagtggat ccgcgtcgtc gcgctcgaac tccaacggat cgcgtcacac ctgatgtggc
     1501 tcgccgcgta cggcccggac ctcgggctgc tcacgggcct cctctgggcc ctgcgggagc
     1561 gggagttgtt cctcgacctc atccagttga tgtccggcgc gcgaatgaac cagaactatc
     1621 ctcgggttgg cggcgtgcgc aacgacctgc cggacaactt cgaggcgatg tgccgacgga
     1681 gcatcgagca cttcctcgag aaagtggaca acgagtacca
//
LOCUS       DATLMA010000200         1123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_622515, whole genome shotgun sequence.
ACCESSION   DATLMA010000200 DATLMA010000000
VERSION     DATLMA010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622515"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VNA10_02505"
     CDS             <1..344
                     /locus_tag="VNA10_02505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017877211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HVG36580.1"
                     /translation="GWGIIRVAHVLGDRRDHFTATTDVWQTFQRILDERKRREVDPTL
                     EILNACVAELDEKDSRDEYVRQHLLDLLDFFATMVSLYDEVRRLPSDRLRQIVKLRGK
                     MRKLLTMGRSD"
     gene            368..826
                     /locus_tag="VNA10_02510"
     CDS             368..826
                     /locus_tag="VNA10_02510"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HVG36581.1"
                     /translation="MTTTFLCVALAAIPLATPAGAEPDRVERALRKLRQEIVSAVNAG
                     DLERALACWSADARIMIEGRPPIEGSAALESARQRLASSRVVRFAMETERIDHSGNLA
                     YELGRITMTLRDPDDTLVEKRGKYLDVWKKHGRSDWRIIVHSPSGDGDSR"
BASE COUNT          215 a          354 c          374 g          180 t
ORIGIN      
        1 aggggtgggg gatcatcagg gtcgcccacg tgctcggcga ccggcgcgac cacttcaccg
       61 cgacgacgga cgtgtggcag accttccaga ggatcctgga cgagcgcaag cgtcgcgagg
      121 tcgatccgac tctcgagatc ctgaacgcgt gcgtggcgga gctcgacgag aaggactcgc
      181 gggacgaata cgttcggcag cacctgctcg acctgctcga cttcttcgcg accatggtct
      241 cgctttacga cgaggttcgg agactcccga gcgaccgcct gcgccagatc gtcaagctcc
      301 gcggaaagat gcggaagctg ctcaccatgg gccgatcgga ttgagtgaca catcacggag
      361 ggctccaatg acaacgacct ttctttgcgt ggctctggct gccattcctc tcgcaacgcc
      421 ggcgggcgcg gaaccggatc gcgtcgagcg ggccctgcga aagctccggc aggaaatcgt
      481 gtcggcggtt aacgccggag atctggagcg cgcgctggcg tgctggtccg cggatgcacg
      541 catcatgatc gagggacggc cgcccatcga gggttccgcg gccctggagt ccgcgcgaca
      601 gaggctcgcc tcgagccggg ttgtgcgctt cgcgatggaa acggagcgga tcgatcattc
      661 cgggaaccta gcgtacgagc tcggccggat cacgatgacg ctccgcgacc ccgacgacac
      721 gctggtcgag aagcgcggca agtatctcga cgtgtggaag aagcacggcc gctcggactg
      781 gaggatcatc gtgcactcgc cgtcgggcga cggagattcg cgctagacga gacgtgcgtc
      841 gccagacctc agtccgctcg tggctgtctc cagatccatc atgagatcga ggtcccggcc
      901 gagaaagcat cctagcaagt caccgagcaa cggcaactac cagttggaac accagccccg
      961 cgccttgctt tccggtaggt gcccccgccc cggggcgcta cgggtggtcc aaggccagaa
     1021 cgtgcctagc aagccacccg cttggtaaaa aattggtcca cgggtcatgc tgggagggac
     1081 cgatcctgag cttaggctcg ggtcgaggcc ccggaccacg aaa
//
LOCUS       DATLMA010000201         1036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_199472, whole genome shotgun sequence.
ACCESSION   DATLMA010000201 DATLMA010000000
VERSION     DATLMA010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199472"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VNA10_02515"
     CDS             complement(<1..619)
                     /locus_tag="VNA10_02515"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HVG36582.1"
                     /translation="MSAAPLSLQGIHKSFGAKQVLRGLDAEVQAGEIFSIVGPSGVGK
                     TTALRLLDLLDSPDAGRITFHGKSYPIRSPESLAQRRRMALVMQNPTVFRATAFENVA
                     YGLWLRGVPDAELRGRVFAGLDFVGLLEAAKDPAEKLSGGEQQRIAFARAAVLNPEIL
                     LLDEFTANLDPFNVRLLEQSILRYRHETGCTVVIVTHNLFQAKRLA"
     gene            complement(616..>1036)
                     /locus_tag="VNA10_02520"
     CDS             complement(616..>1036)
                     /locus_tag="VNA10_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36583.1"
                     /translation="LLGFLFTPIGMILAQSVIVMPIVMGITISAMMTVEKRLHDTALA
                     LGANERQWRTTALHDARVGVFTAVMVGFGRAISEVGTVLIVGGNIRGQTRVLTTAIVL
                     EISQAHYLEATIFGVILFVIAFAVFAFLQRLQAKGVV"
BASE COUNT          193 a          334 c          339 g          170 t
ORIGIN      
        1 ccgcgaggcg cttggcctgg aacaagttgt gcgtcacgat cacgaccgtg catcccgtct
       61 catgccgata ccgcaggatc gactgttcca ggagccgcac gttgaatggg tcgaggttcg
      121 cggtgaactc gtcgagcagg agaatctccg ggttcaggac cgccgctcgg gcgaaggcga
      181 tgcgctgttg ctcgccgccg ctgagcttct cggccgggtc cttcgcggct tccaagagtc
      241 cgacgaagtc gaggcccgcg aacacgcgcc cgcggagctc ggcgtcgggg acgcctcgca
      301 gccacaggcc atacgcgacg ttctcgaagg ccgtcgcgcg gaagacggtc gggttctgca
      361 tcaccaacgc catgcggcgc cgttgcgcga gcgactcggg cgaacggatc ggatacgact
      421 ttccgtggaa cgtgatcctg cccgcgtccg gcgaatcgag cagatccagg agacgaagcg
      481 cggtcgtctt cccgactccg ctgggaccaa cgatcgaaaa gatttccccg gcctggacct
      541 ccgcgtccag gcctcggagg acctgcttcg ccccgaacga cttgtggatt ccttgcaagg
      601 agagcggggc tgcgctcata cgaccccttt cgcctgcaag cgctggagga aggcgaacac
      661 ggcaaatgcg atcacgaaca ggatgacccc gaagatcgtg gcctcgaggt aatgggcctg
      721 cgatatttcg aggacgatcg ccgtcgtcag gacgcgcgtc tgtccgcgga tgttcccgcc
      781 gacgatgagg acggtcccga cctcggagat cgcgcggccg aaaccgacca tgacggccgt
      841 gaatacgccg acccgggcgt cgtgcaaagc cgtggtccgc cactgccgct cgttcgcgcc
      901 caaggcgagg gccgtgtcgt ggagccgttt ctccaccgtc atcatcgccg agatcgtgat
      961 gcccatcaca atcggcatga cgatgaccga ctgagcgagg atcatcccga ttggcgtgaa
     1021 gaggaacccg aggagt
//
LOCUS       DATLMA010000202         1332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_744467, whole genome shotgun sequence.
ACCESSION   DATLMA010000202 DATLMA010000000
VERSION     DATLMA010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744467"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..>1332
                     /locus_tag="VNA10_02525"
     CDS             170..>1332
                     /locus_tag="VNA10_02525"
                     /inference="COORDINATES: protein motif:HMM:NF044564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HVG36584.1"
                     /translation="MEAVAQEIAERLRPAPLVRIVTHIDTDGITGGAIASEALDRAGI
                     SHEVAFVKKLDEVVLTELKRKGTPLVWFIDLGAGMLHALHGIDAVITDHHVPTEREVP
                     KALRSDLVRFTESQDRVLMLNPHLEGEGSDVASGAGCAYAVARALSPKNVDLASIAVV
                     GAVGDVQDQEFRRLSGYNRTILADGIAAGVLEAQIDLRLFGRETRPAYKLLQYATDPW
                     IPRLSGNEEACIAFLLEQGVDLKIEDHWRSWSDLDRGEKQRVVSALVSHMLERGCGIK
                     EVERLAGETYTLPREPAGSPTRDAKEFGTLMNACGRYDQPEVGYRVCRGDRDEYLAQA
                     LRLLRGHREYLMDSMETIAEAGITQMKAVQYFHAADRIRDTVVGIAASMVLNR"
BASE COUNT          240 a          424 c          450 g          218 t
ORIGIN      
        1 cttccccagc aggacctgac cgtcgcgagc gacgagacct gtcgccgtga cgtgaagcac
       61 gtcgccgtca aggtgctcct cggatatccg ttctcctcgg gatcgcggac gagcgtgtgc
      121 gcggctccct cccaaagatt catgcgtttg actcccggtg gctggggcga tggaggccgt
      181 cgctcaggag atcgcggagc gtctgcgccc cgcgcccttg gtccggatcg tcacgcacat
      241 cgacacggac ggcatcacgg ggggagcgat tgcctcggag gccctggatc gggccggcat
      301 ctcccacgag gtagcgttcg tcaagaagct ggacgaagtc gtgctcacgg aactgaaacg
      361 gaaagggacg cctctcgtct ggttcatcga cctgggagcc gggatgttgc acgcgttgca
      421 cggtatcgat gccgtcatca cggaccacca tgtcccgacc gaacgggagg tcccgaaggc
      481 cctgaggagc gatctcgtcc gtttcacgga atcccaggat cgggtcttga tgttgaatcc
      541 gcatctcgag ggcgaaggct ccgacgtcgc gagcggcgcg ggatgcgcgt acgcggtggc
      601 gagagcgctt tccccgaaga acgtggatct cgcctcgatc gcggtcgtcg gcgccgtggg
      661 cgacgtccag gatcaggagt tccgacggct ctccggctac aaccgcacga tcctcgccga
      721 tgggatcgcg gccggcgtcc tcgaggccca gatcgatctc cgtctcttcg gacgagagac
      781 ccggcccgcg tacaagttgc tccagtacgc gacggaccca tggatccccc gcctcagcgg
      841 gaacgaggaa gcctgcatcg cgtttctcct cgagcaggga gtcgacttga agatcgagga
      901 ccactggcgg agctggtcgg acctcgaccg aggtgagaag cagcgcgtcg tctccgcgct
      961 cgtctcgcac atgctggaac gcgggtgcgg aatcaaggag gtcgagcgac tcgcgggaga
     1021 aacgtacacc ctgccacgcg aacccgctgg cagtccgacc cgcgatgcaa aggagttcgg
     1081 gacgctgatg aacgcctgcg gacggtacga ccagccagag gtcgggtatc gcgtgtgccg
     1141 cggcgatcgg gacgagtacc tcgcgcaggc cctccggctc ctccgcggcc accgggagta
     1201 cctgatggac tcgatggaga ccattgcgga agccggcatc acgcagatga aagcggtcca
     1261 gtacttccac gcggcggatc gcattcgcga cacggtggtc gggattgccg cgagcatggt
     1321 cctcaaccgg ga
//
LOCUS       DATLMA010000203         1953 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_565226, whole genome shotgun sequence.
ACCESSION   DATLMA010000203 DATLMA010000000
VERSION     DATLMA010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_565226"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VNA10_02530"
     CDS             <1..249
                     /locus_tag="VNA10_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36585.1"
                     /translation="MSFNEAMQVISYMVVTIVQGVVDHLTKSYLTTLAEEVENAAKEI
                     EEQNNHAIHVEVQPPETVQAAWDVGPVAFNDDGFIGLR"
     gene            509..1396
                     /gene="mptA"
                     /locus_tag="VNA10_02535"
     CDS             509..1396
                     /gene="mptA"
                     /locus_tag="VNA10_02535"
                     /EC_number="3.5.4.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004558302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase MptA"
                     /protein_id="HVG36586.1"
                     /translation="MPKDVQSERVANGFRLNKVGVTGVVKPVQIRRPNRAVTLTTTLD
                     LFVDLPQDQKGSHLSRNLEAINEVVDRSVREPVGSLEELTEIIAQILLKRHDYATTSE
                     VWATAEYFLERTSPWGRTSLEPYRLVARANARRGEREVVRSIGVEVVGMTACPCAMET
                     VRDDVLKEHPELARWPEGVPIITHNQRNRTTLILQEPPSHDIEADELIDIVEDSLSAP
                     TYGLLKRPDEGRLVEMAHRNPKFVEDVVRDVLDRLLKRYPKMPDTTWVRVKSEAEESI
                     HKHNALAERSTTFGELRAL"
     gene            1608..1940
                     /locus_tag="VNA10_02540"
     CDS             1608..1940
                     /locus_tag="VNA10_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36587.1"
                     /translation="MAPTEAPFESTTPLILLSYDVSTTHRSAVSRVAHLIFGRKDMPE
                     ASPRPYIRRPGVVWIGQSVFVLPQPLAAELAEKLHGLGATVRMACVTIPPAEIEAFRR
                     SSRDRSAV"
BASE COUNT          372 a          621 c          616 g          344 t
ORIGIN      
        1 atgtccttca acgaagcgat gcaagtcatc agttacatgg tcgtcacgat cgtccaaggc
       61 gtcgtcgacc atctgacgaa gtcgtacctc acgaccctcg ccgaggaagt ggagaacgcg
      121 gcgaaggaga tcgaggaaca gaacaaccac gcgatccacg tcgaggtgca gccgcccgag
      181 acggtccagg ccgcctggga tgtcgggcca gtcgccttca acgacgacgg cttcatcggc
      241 ctccggtgag acgctcaaca atcctccccc caaccaacgc ccacccgcga gggcttcggg
      301 cgatctccgc cgcaaggcgg ggagcggccc tcgcgacctc tttctttacg tctctcagca
      361 gggcggattg ccgcatatgg tttgaccaag tgccgctgta accgcggccc cgcctcgcat
      421 gggacctggc ggccgacgat gcggttcgcc gcactgacgc cggcaagttt taagtgtacg
      481 ggccggtaga ccccgccggg ttgagtcaat cccgaaggac gtccagagcg agcgggtcgc
      541 gaacggattt cgattgaata aggtcggagt gacgggggtc gtcaagcccg tccagatccg
      601 tcggccgaat cgcgcggtga cactgacgac gaccctcgac ttgttcgtcg atctcccgca
      661 agatcagaag ggatcgcacc tctctcggaa tctcgaggcg attaacgagg tcgtcgaccg
      721 ttctgtccga gagccggtcg ggagcctcga agaactcacc gagatcatcg cgcaaatcct
      781 cctgaagcga cacgattacg cgacgacctc ggaagtctgg gcgacggcgg agtacttcct
      841 cgagcgaacg tcgccgtggg gccggacctc tctcgagccg tatcggctcg tcgcccgcgc
      901 gaacgcgcga cggggggagc gggaggtcgt gcgatcgatc ggcgtcgagg tcgtgggcat
      961 gaccgcgtgc ccgtgcgcga tggagaccgt gcgcgacgac gtcctgaagg agcacccgga
     1021 actcgcgcgg tggccggagg gcgtgccgat catcacgcac aaccagcgga atcggacgac
     1081 gctgattttg caggagcccc ccagccacga catcgaggcg gacgagctga tcgacatcgt
     1141 cgaggattcg ctgtccgcgc cgacgtatgg tctgctgaag cgacccgatg agggtcgcct
     1201 cgtcgagatg gcgcaccgca acccgaagtt cgtcgaggac gtcgtgcgcg acgtgttgga
     1261 ccggctcctg aagcggtatc ctaagatgcc cgacaccacc tgggtgcggg tgaaatccga
     1321 ggccgaagag tccatccaca aacacaacgc attggcggaa cggtcgacca cgttcggcga
     1381 actgcgcgcg ctgtgaggcc gacacccaga ttgtcgggcg gtcgccgctc tgtcaacatg
     1441 tttacgctgt ggcaaggccg cgacggacct gctgcggcct gcagttcagc ctgtaaacat
     1501 gtttacggga cgaggcgaac gcattccttg accggcacgt tctcggcgaa tactttcact
     1561 aatccctccc tgatatagtt atattatagc ttcatgatgg ggtcttcatg gcccctaccg
     1621 aagcgccgtt cgagtcgacg actccactga tcctgctctc gtatgacgtg tccacgacgc
     1681 atcgttcggc ggtctcgcgg gtcgcccacc tgatcttcgg tcgcaaggac atgccggagg
     1741 cctcgccccg gccctacatc cgccgccccg gggtcgtctg gatcgggcaa tccgtcttcg
     1801 tcctcccgca acccctcgcg gcggaactgg cggagaaact ccatgggctc ggtgccacgg
     1861 tgaggatggc atgcgtgacg attcctccgg cggagattga agcgttccga cgtagctcgc
     1921 gggaccgatc cgccgtgtaa gcatgtttac gga
//
LOCUS       DATLMA010000204         1328 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_682015, whole genome shotgun sequence.
ACCESSION   DATLMA010000204 DATLMA010000000
VERSION     DATLMA010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_682015"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..415
                     /locus_tag="VNA10_02545"
                     /pseudo
     CDS             215..415
                     /locus_tag="VNA10_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002649131.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            555..1232
                     /locus_tag="VNA10_02550"
     CDS             555..1232
                     /locus_tag="VNA10_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013919026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HVG36588.1"
                     /translation="MTSIYQRVLGSDFGRLHPQIQRRFGFASTDNLASIGRGLMEEVW
                     KGRFYTVPFLNVGTWRRIMFPETGRNIPFTVENYAFVDRFGRETVSWIRTFESRRTRR
                     FDAYMIYSEARGRVVDYLGSHEHLAVDIDLSVDQQGGVRLRSGAQRFYEGPVGFNFPK
                     LFSGIADVREWYDEKAQRFRITVDVRNPTWGPLFGYRGSFDVEWRKVRAGEVPIHILP
                     RRQERRE"
BASE COUNT          224 a          416 c          425 g          263 t
ORIGIN      
        1 tggccgcgcc tctcgaggct agattgcctg gatggtagca ggattcccgg cgaacgccca
       61 cccatccgcg ccggcactcc cagattgcga agcggggaag ggtaggctac cgttcgccaa
      121 gcgtggtcgc gatgtcgctg acgctcgcgc cgatggagcc tacgggcagg cggctggagg
      181 tgtggctgag gggatccgac tctccggaat cggaatgagt atctacgtcg agattctcat
      241 ccgcgccccg atggacgcac tctgggcgca cacacagacg ccagagctcc acgagcggtg
      301 ggatctccgc ttttctgaaa ttgcgtacgt ccccaggagc atcgagaccg aacctcagcg
      361 tttccgctac gccacacgca tcgggtttgg actcgaggtc gccggcgaag gcgagctccc
      421 cgattcctcg gtgccgcgtt caatccggtt tcgttgaatc tggcggtcgc gtgtctcgcc
      481 gcgatcgatc tgatggtgct tagcggactt ccctcggcgg cccgctgtcg tcgatgaccg
      541 gtctccgagg cagcatgacc tccatctacc agcgcgtcct cggctcggac tttggccgtt
      601 tgcatccgca gatccagcgg cggtttggct tcgcaagcac cgacaacctc gcttcgatcg
      661 gccgtggcct catggaagag gtctggaagg gccggttcta cacggtgccg ttcctcaacg
      721 tcggcacgtg gcgccgcatc atgttccccg aaacgggacg caatatcccg ttcacggttg
      781 agaattatgc gtttgtcgac cggttcggtc gtgagacggt ttcctggatt cgcacgttcg
      841 agtctcgtcg cacgcgccgg ttcgacgcgt acatgatcta cagcgaagca cgcggccgcg
      901 tcgtcgacta tctcggatcg cacgagcact tggctgtcga catcgatctg tcagtggatc
      961 agcagggtgg ggttcgcctc cgttcgggtg cacaacgctt ctacgagggg cccgtgggct
     1021 tcaactttcc aaagctcttc agtggtatcg cggacgtgcg cgagtggtac gacgagaagg
     1081 cgcagcgctt tcgcattacc gtcgacgtcc gcaacccgac ttgggggcca ctgttcggct
     1141 atcgtggaag cttcgacgtg gagtggcgga aggtccgagc cggagaagtc cccattcaca
     1201 tcctgccgcg ccgccaggag cgtcgcgagt aaacgcaatc gctgagccat gccgccgcgc
     1261 ggcaacatgg gtctcggctc accgctaggc cgagcgggtg catgcacggg cacggtccag
     1321 gacgtcag
//
LOCUS       DATLMA010000205         1007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_19595, whole genome shotgun sequence.
ACCESSION   DATLMA010000205 DATLMA010000000
VERSION     DATLMA010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19595"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VNA10_02555"
     CDS             complement(<1..991)
                     /locus_tag="VNA10_02555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36589.1"
                     /translation="MPFLDQFRIEALPKKWADEGRLWQETYFPEMPEVFDAPKWSRHY
                     PETPMPRLSVIMAKPDGFAGFAQKVVGATAATGNLTNRLWTADKMPDAQFMTALKIIR
                     AQASTELGSIQQHRMVYEQLDSGSLTGLDKEIVEGIHRTDPDGDRLESISFSKKRVCV
                     EELRHHMQMAGVLTLDSTFDKARWGRHWATETMEELFAMKPGEHVLDAFNIEFKSLMD
                     SATFMSFIDRVGKFQLEMQHHFLYGPMALSMPWMRFLEESYHLAAGETLMKAIAVAGI
                     LDGGNFGIEDLQQTLNMWYPRGLEMFGSELGGDLVKGVFKTLKNREAQVIYIDE"
BASE COUNT          163 a          327 c          309 g          208 t
ORIGIN      
        1 cctcgtcgat gtaaatcacc tgggcctcgc ggttcttcag cgtcttgaac acgcccttca
       61 cgaggtctcc gcccagctcg gacccgaaca tctccagacc gcgcgggtac cacatgttga
      121 gcgtctgctg gagatcctca atcccaaagt ttccgccgtc caggatgccc gcgaccgcga
      181 tcgccttcat gagggtctcc cccgcggcga ggtggtacga ctcctcgagg aaccgcatcc
      241 acggcatcga gagcgccatc ggcccgtaca ggaagtggtg ctgcatctcg agctggaact
      301 tcccgacgcg gtcgatgaac gacatgaacg tcgcggagtc catgaggctc ttgaactcga
      361 tgttgaacgc atcgaggacg tgttctccgg gtttcatcgc gaagagctct tccatcgtct
      421 ccgtcgccca gtggcgtccc cagcgggcct tgtcgaacgt cgaatcgagc gtcaggacgc
      481 cggccatctg catgtggtgt cgcagctcct cgacgcagac gcgcttcttc gagaacgaga
      541 tcgactcgag gcggtccccg tctgggtccg tgcgatggat cccctcgacg atttccttgt
      601 cgagtccggt gagcgatccg ctgtcgagct gctcgtacac catccggtgc tgctggatcg
      661 agccgagttc cgtcgaggcc tgcgcgcgga tgatcttcaa cgcggtcatg aactgcgcgt
      721 cgggcatctt gtccgcggtc cacagacggt tggtcaggtt gccggtcgct gccgtcgccc
      781 cgacgacctt ttgcgcgaac ccggcgaagc cgtccggttt cgccatgatg acgctgaggc
      841 ggggcatcgg cgtctccgga tagtgccggg accacttcgg cgcgtcgaag acctcgggca
      901 tctccgggaa gtacgtctct tgccagagcc tcccttcatc cgcccacttc tttggcaggg
      961 cctcgatgcg gaactggtcg aggaagggca tggtgttcgg ttcgatg
//
LOCUS       DATLMA010000206         1307 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_263055, whole genome shotgun sequence.
ACCESSION   DATLMA010000206 DATLMA010000000
VERSION     DATLMA010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263055"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..1035)
                     /locus_tag="VNA10_02560"
     CDS             complement(52..1035)
                     /locus_tag="VNA10_02560"
                     /inference="COORDINATES: protein motif:HMM:NF036733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyquinol 1,2-dioxygenase"
                     /protein_id="HVG36590.1"
                     /translation="MVTQQKALVESGRANDLGYKTFRLGGYEFERNAYFTIIRYPGGE
                     YHIPVGEFMRAVQRDIGWNFFYGMVKFDEVFGTFNFYEKGVDMFLGKYNDAWQKSGKH
                     YSEMFPNEKISATFKAILEDWVPPDFNPWAAPRETGSPFGRKRGGPHPAIFRKRIVTT
                     TMIKTQRTDDTHPVNEAFQDLRGKDGEMKIKPEYAERFGLLNLYEYLARNDVTWNPEI
                     VSAVEYSLFCPTTEEYILPITHGNDRVEWFLLLNGQISMEVRDRDTGILLAYLHMKPG
                     DCTAMPADISHNLWAPERSMLLVWENGNPQLPELLRLGKTPTAPLEEFGLK"
     gene            complement(1038..>1307)
                     /locus_tag="VNA10_02565"
     CDS             complement(1038..>1307)
                     /locus_tag="VNA10_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyquinol 1,2-dioxygenase"
                     /protein_id="HVG36591.1"
                     /translation="MPHDEYLLLVEGEVRVDYIEPRDQLKPGPHKNVTGTDMGHMVLR
                     DGSLASLPARVAYRMRAARKSLVLLQTKHSEWLTYAWEEICLTEE"
BASE COUNT          219 a          407 c          407 g          274 t
ORIGIN      
        1 gattcacgag ggggctgggc atggacccgg ctcgaaacgt tcgaggcgac gctacttgag
       61 cccgaactcc tccaacggcg cggtgggagt ctttccgagg cggaggagct cggggagctg
      121 cggattcccg ttttcccaga cgagcagcat ggaccgctcg ggggcccaca ggttgtggga
      181 gatgtccgcg ggcatcgcgg tgcagtcgcc cggtttcatg tgaaggtatg ctagcaggat
      241 acccgtgtcc cggtcgcgga cttccatcga gatctgcccg ttcaacaaga ggaaccactc
      301 gacgcggtcg ttgccgtggg tgatcggcag gatgtattcc tccgtcgtcg ggcagaacag
      361 gctgtactcg acggcggaaa cgatctccgg gttccacgtc acgtcgttcc gcgcgaggta
      421 ctcgtacagg ttgagcaggc cgaaccgctc cgcgtattcc ggcttgatct tcatctcgcc
      481 gtccttccca cgaaggtcct ggaacgcctc gttgaccgga tgcgtgtcgt cggttcgctg
      541 ggtcttgatc atcgtcgtcg tcacgatccg ctttcgaaag atcgcagggt ggggaccgcc
      601 gcgcttgcgg ccgaaggggc tcccggtctc ccgcggcgcg gcccacggat tgaaatccgg
      661 tgggacccag tcctcgagga tcgccttgaa cgtggcgctg atcttctcgt tcgggaacat
      721 ctcgctgtag tgcttcccgg acttctgcca cgcgtcgttg tacttgccga ggaacatgtc
      781 gacgcctttc tcgtagaagt tgaacgtccc gaagacctcg tcgaacttca ccatgccata
      841 gaagaagttc caaccgatgt cccgctggac ggcacgcatg aattctccca cggggatgtg
      901 gtactcccct ccggggtacc ggatgatcgt gaagtatgcg ttccgttcga actcgtagcc
      961 gccgaggcgg aaggtcttgt acccgaggtc gttcgcccgg ccggactcca ctaacgcttt
     1021 ctgttgcgtg accatcgtca ctcctccgta agacagatct cttcccatgc gtacgtcagc
     1081 cactcgctgt gcttcgtttg caagaggacc aaggacttcc tcgcggcgcg catccggtac
     1141 gcgacgcgag cgggcaagga cgccaagctg ccgtcgcgca ggaccatgtg acccatgtcc
     1201 gtgcccgtga cgttcttgtg cggccccggc ttcagctggt cgcgcggctc gatgtagtcg
     1261 acgcgcacct cgccctcgac gagcaagagg tattcgtcat gcggcat
//
LOCUS       DATLMA010000207         1069 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_199992, whole genome shotgun sequence.
ACCESSION   DATLMA010000207 DATLMA010000000
VERSION     DATLMA010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199992"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..>1069
                     /locus_tag="VNA10_02570"
     CDS             14..>1069
                     /locus_tag="VNA10_02570"
                     /inference="COORDINATES: protein motif:HMM:NF013255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HVG36592.1"
                     /translation="MNPSKILLTGGTGFIGSRLCERLALDYKLPYRVLVRNFTHAPRI
                     ARLGAEMVGGDLDDSRSLDRALVGCDTVVHLAYSEGPQTRTLVRACRKAEIKRLVHIS
                     SIAVHGADPGPEAAHEATARIGRYPGQEYSNLKAQAELVIQHAIGDGLPAVILRPTIV
                     YGPYGPFVISIVEAARDRGVFTMLDEGRGICNAVYVDDVCDAILTAIQSNEGIGSAFF
                     ITADNAVTWREFNLAFAQMVVPVPRIISLSSEEVQRYWASQRPTFKSDIAALSRLATS
                     AEFHRHLSSVAMLRTLITGGKRLVTSVLPRDRLTALKDRRGGPPTRDGETARSGVSWP
                     DPGRVTRECMRIAFSNER"
BASE COUNT          189 a          344 c          340 g          196 t
ORIGIN      
        1 tcgacccggc gcgatgaacc cgtcgaagat cttgttgacc ggaggcaccg gcttcatcgg
       61 ctcccgctta tgcgagcgac tcgcgctcga ctacaagctc ccttatcgcg tgctggtgcg
      121 taacttcact cacgcgcccc gaatcgcgag acttggcgcg gagatggtgg gtggtgacct
      181 cgacgactcc cgcagcctcg accgggctct ggtcggctgc gatacggtgg tgcatcttgc
      241 gtactcggaa ggcccgcaaa cgcggacctt ggttcgagcc tgccgcaagg cggagatcaa
      301 acgtctcgtt cacatcagct cgatcgccgt gcacggcgcg gatcccggtc cggaagccgc
      361 gcacgaagcg actgcccgga tcggacggta cccgggacaa gaatactcga acttgaaggc
      421 gcaagccgag ttggtgattc agcacgcgat cggagacggc ctccccgctg tcattcttcg
      481 gcctaccatc gtgtacgggc cgtacggacc gttcgtaatc tccatcgtcg aggccgcccg
      541 cgatcggggt gtgttcacca tgctcgacga ggggcggggc atctgcaatg ccgtctatgt
      601 cgatgacgtg tgcgacgcga tccttacggc gatccagagc aacgagggca tcgggtccgc
      661 atttttcatc accgccgata acgcggtcac ctggcgggag ttcaatctcg ccttcgcgca
      721 aatggtggta ccggtgccgc gcatcatcag cctcagctcg gaagaagtcc agcggtactg
      781 ggcgtcccag cggccgacgt tcaagagcga catcgcggcg ctcagtcgac tcgctacgtc
      841 agccgagttc caccgccacc tctcctcggt ggccatgctc cgtaccctca tcacgggcgg
      901 gaagcgactc gtgacgagtg ttctaccgcg cgatcgtctg actgcgttga aggatcgcag
      961 ggggggaccg cctacgcgtg acggagaaac agcacgttcc ggggtgtcct ggccagaccc
     1021 gggccgcgtg acgcgggagt gcatgcggat cgcgttctcc aacgagcgt
//
LOCUS       DATLMA010000208         1538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_263354, whole genome shotgun sequence.
ACCESSION   DATLMA010000208 DATLMA010000000
VERSION     DATLMA010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263354"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VNA10_02575"
     CDS             <1..812
                     /locus_tag="VNA10_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36593.1"
                     /translation="SPSQLQEIHEAVRGLTGLTIVNQGPKFVTIENFVEPTRFPIDGL
                     LRRLHYLTSRMEKLALGVISGDAKGNIEEVARMELEVDRLYWLVVRQLLLAAQNRTIS
                     GRIGVTEPRHLLGDRVVTVGLENVGDLWEELAAGVAPFLKPNRRIPRDFAKTIGNLKG
                     KLEEVIELTMTAFFANDLAKANEALDRQAVLTRDIRAAAGPGSKPRRGQAGGPSRSNG
                     LFQIVLRPLEHVAKYYASIAQITINRALERPVRARTPAVAPPPPGEPTDRP"
     gene            complement(825..>1538)
                     /locus_tag="VNA10_02580"
     CDS             complement(825..>1538)
                     /locus_tag="VNA10_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HVG36594.1"
                     /translation="EMLYLMFLARYRPIVEYCGGTEIGGGYITGTVVQPCAPSMFTTP
                     ALGLDLEILDGGRPAARGEVFLVPPSIGLSTELLNYDNDEEYYNDVPKGVHGEVLRRH
                     GDQIERLGGGYYRHLGRIDDMININGVKTSSEEIRSVLKNELVYDSKPIAVDIDRSGQ
                     DRLVVYAVLRDPGLLGSDELRAQLRRDFQRAIKENLNPLLAHVEDVVLVSELPQAGPG
                     KTRTMKELRNDYAARTARA"
BASE COUNT          278 a          501 c          489 g          270 t
ORIGIN      
        1 tctccccgag ccagttgcaa gagatccacg aagcggtccg aggcctcacg ggcctcacga
       61 tcgtcaacca gggccccaag ttcgtgacga tcgagaactt cgtcgagccg acgcgcttcc
      121 ccattgacgg gctcctccga cggctgcact atctgacgtc gcgcatggag aaactcgcgc
      181 tcggcgtgat ctccggtgac gcgaaaggaa acatcgagga agtcgcgcgg atggagctcg
      241 aggtcgaccg cctgtattgg ctcgtcgtcc ggcagctgct gctcgcggcc cagaaccgaa
      301 cgatctccgg acggatcggg gtgacggagc cgcgacacct cctcggagac cgggtcgtca
      361 ccgtcggcct ggagaacgtg ggcgacctct gggaggaact cgcggccggg gtcgctccat
      421 tcctgaagcc gaatcgacgg atcccgaggg acttcgcgaa gaccattggc aacctcaagg
      481 ggaaactcga ggaggtaatc gagctcacga tgacggcgtt cttcgccaac gacctcgcga
      541 aggccaacga ggcactcgac cgccaagccg tgttgacccg ggacattcgc gcggccgccg
      601 gccccggttc caagccgcgt cgtgggcagg ctggcgggcc atcgcggtcg aacgggttat
      661 ttcagatcgt ccttcgaccg ctcgagcacg tcgcgaagta ttacgccagc atcgcgcaaa
      721 tcacgatcaa tcgggcgctc gaacgcccgg tgcgcgctcg gactcccgcg gtcgcgcccc
      781 ctccgccggg agagccaacg gaccgccctt gattccgatg aagctcaggc gcgcgcggtc
      841 cgggccgcgt agtcgtttcg aagctccttc atggtccgcg tctttccagg gccggcttgc
      901 gggagttccg acacgaggac cacgtcctcc acgtgagcca ggagcggatt gaggttctcc
      961 ttgatggctc gttgaaagtc acggcggagc tgcgcccgga gttcatccga gccgaggagc
     1021 cctggatcgc ggaggacggc atacacgacc aaccggtcct gtccagaccg gtcgatgtcc
     1081 accgcgatcg gtttcgagtc gtacaccagt tcgttcttca gaacactccg gatctcctcg
     1141 gagctcgtct tcacaccgtt gatgttgatc atgtcgtcga tccgtcccag gtgacgatag
     1201 tagccgccgc cgaggcgttc gatctggtct ccgtgtcgcc ggagcacctc tccgtgcacg
     1261 cctttcggga cgtcgttgta atactcttcg tcgttgtcgt aattgaggag ctcggtcgag
     1321 agaccaatgg agggggggac gaggaagacc tctccgcggg cggccggccg gcccccatcg
     1381 aggatctcca gatcgaggcc gagcgccggg gtcgtgaaca tcgacggagc gcagggctgc
     1441 accacggtcc cggtgatata tccgccaccg atctccgtgc cgccgcagta ttcgacgatc
     1501 ggccggtacc tcgcgaggaa catgagatac agcatctc
//
LOCUS       DATLMA010000209         1623 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_200180, whole genome shotgun sequence.
ACCESSION   DATLMA010000209 DATLMA010000000
VERSION     DATLMA010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200180"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..752)
                     /locus_tag="VNA10_02585"
     CDS             complement(192..752)
                     /locus_tag="VNA10_02585"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HVG36595.1"
                     /translation="MMPDLEEVPRLRKALGLTQTALARLSNVSQSTIVKIEKRQMNPS
                     YDVVRRVMASLQAELKRQEKKALVEQIQTRKVQYVEAKIPLATAVDEMRHWKFSQMPV
                     MHNGHPVGSISDKVINNLILSGKDPKDLARIRVDEVMEPAFPQVDAKAPVELAASLLR
                     HYNAVLVTAKGDVTGIVTKSDLMKLL"
     gene            934..>1623
                     /locus_tag="VNA10_02590"
     CDS             934..>1623
                     /locus_tag="VNA10_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008082938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HVG36596.1"
                     /translation="MARNIYVEELIHTPIEQQGTEIVERKGIGHPDSVADGLAEIVSR
                     ALSKMYLQRFGRILHHNTDQVEVVGGQSAPKFGGGVFLEPAYILLVGRATTMVNGERL
                     PYRTVAIQAAHDYLTTNCTNLNVDADVTLDCKIGQGSVDLRGLYDTQKHLANDTSFGV
                     GFAPFSELETVVMETEHLINGPLKKDLKEVGQDIKVMGVRHDDAMRLTVAAAFVDKYV
                     PDKDHYRSVVEE"
BASE COUNT          318 a          513 c          503 g          289 t
ORIGIN      
        1 cgacctgctg tctccgcccg ccacgatgct cgtaatgcca gaaatacaag taacgccggc
       61 gccgaaccgt cttcacgcaa taaccacagc caatcatcaa ggggatcacg ttcagcccgc
      121 cgtaagtgtt atcgttattt aacgataaca agggggtggg cgaatcggtt gcacacgccg
      181 gactccggac gtcacaggag tttcatcagg tccgacttcg tgacgatgcc cgtgacgtcg
      241 cctttcgcgg tcacgaggac ggcgttgtag tgtcgcagca ggctcgcggc gagctcgacc
      301 ggggccttgg cgtcgacctg cgggaaggcc ggctccatga cctcgtccac ccggatccgc
      361 gcgagatcct tcgggtcttt tccggacagg atgaggttgt tgatcacctt gtccgagatc
      421 gagccgaccg gatggccgtt gtgcatgacg ggcatctgag agaatttcca gtggcgcatc
      481 tcgtccacgg cggtggcgag cgggatcttc gcctcgacgt actggacctt ccgcgtctgg
      541 atctgctcga cgagcgcctt cttctcctgc cgcttcagct ccgcctggag cgacgccatg
      601 acccgccgga cgacgtcgta cgaggggttc atctgccgct tctcaatctt cacgatcgtc
      661 gactggctga cgttcgagag gcgcgccagg gcggtctgcg tgagcccgag ggccttccgc
      721 agccgcggga cctcttccag atcgggcatc atctctggcg gcaatgggcc gagggtacat
      781 attcctgtcg gaattttcag ggcgattgca tattattggc cgatgagccg ggctcgagac
      841 ccgatcgcac ccgttccgga ttggagcgag gccgcgacaa aaagccatat atgcaccgcc
      901 gcatccacgc cgcacagccg tcgggggact tccgtggcgc gaaatatcta cgtcgaggaa
      961 ctcatccaca cgccgatcga acagcaggga accgaaatcg tcgagcgcaa ggggatcggt
     1021 cacccggaca gcgtcgccga cggactcgcg gagatcgtct cgcgggctct ttcgaagatg
     1081 tacctccagc ggttcgggcg catcctccat cacaacacgg accaggtcga ggtcgtcggg
     1141 ggacagagcg cgccgaagtt cggcggcggg gtgttcctcg agcccgcgta cattctcttg
     1201 gtcggccggg cgacgacgat ggtcaacggc gagcgcctcc cgtatcgcac ggtcgcgatc
     1261 caggcggccc acgactacct cacgacgaac tgcacgaacc tgaacgtcga cgcggacgtc
     1321 accctcgact gcaagatcgg ccagggttcc gtcgacctcc gcggattgta cgacacccag
     1381 aagcacctgg cgaacgacac atcgttcggc gtcggattcg caccgttctc cgaactcgag
     1441 acggtcgtca tggagacgga gcacctgatc aacggaccgc tgaagaagga cctgaaagag
     1501 gtcgggcagg acatcaaggt catgggggtc cggcacgacg acgcgatgcg actcacggtc
     1561 gccgccgcct tcgtggacaa atacgtcccg gacaaagacc actaccgaag cgtggtcgaa
     1621 gag
//
LOCUS       DATLMA010000210         1607 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_565883, whole genome shotgun sequence.
ACCESSION   DATLMA010000210 DATLMA010000000
VERSION     DATLMA010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_565883"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VNA10_02595"
     CDS             <1..473
                     /locus_tag="VNA10_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36597.1"
                     /translation="IDGLAAGTNVRLEPVLLWATFAFSVASCSAIAAQTWIVRSRFRE
                     FLGPGFGRVFILSAIPTTAVIFALVSMLLLLGHMDSTLAGGQMPSDSALAGAISSFQA
                     FAVGTIAFPAAAGFSNRVRDLSQRGFLRAVRILEVGELPVLVGLVLVFLALRAL"
     gene            518..621
                     /locus_tag="VNA10_02600"
     tRNA            join(518..553,587..621)
                     /locus_tag="VNA10_02600"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:550..552,aa:Gly,seq:ccc)
     gene            complement(634..>1607)
                     /locus_tag="VNA10_02605"
     CDS             complement(634..>1607)
                     /locus_tag="VNA10_02605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36598.1"
                     /translation="YWDIWRHVVVGRESFFTPPHLVLYAGFGSVALAGIVGSVAGASA
                     PRWAGPRVRIVGLLVPIEFLLIGAGALFQALAFPWDEAWHRLVAEGLVTETFWSPPHV
                     MAIAGGIVSTFGFLVAVVLERTRWNGARSGLGLMAVGIGVGLLLFGLQVLLGPMDFAT
                     TFNGQILRDAIAYPTAVSLATPAVLILALLAGRRAGLATLAAAVYTGLRSLMIVGQFA
                     LPPPVLFLAPVVDLAFRVLRPQRFGLTAATLTGSAWAVLFYVVYLMLRGFAMDPLFVG
                     LFSFTVFIAGGVSGGIGFGVGRMVQKLESTAAASPPADIPVAAIPAS"
BASE COUNT          298 a          508 c          513 g          288 t
ORIGIN      
        1 tcatcgacgg cctcgccgct ggaaccaatg tgcgcctgga gcctgtcctg ctctgggcca
       61 cgttcgcctt ttcggtcgcc tcgtgctcgg ccatcgccgc gcaaacctgg attgtacgaa
      121 gtcgatttcg ggaattccta ggacctggtt tcggccgagt gttcatactt tctgctattc
      181 cgacgactgc ggtaatcttc gcgcttgtct cgatgttact gctcctcgga cacatggact
      241 cgactctcgc gggcggccag atgccttcgg attctgctct ggcgggcgcc atcagcagct
      301 tccaggcttt tgccgtcggc acgatcgcgt ttccggctgc ggcaggattt tcgaatcgtg
      361 tccgcgatct cagtcagcgc ggttttctgc gcgcagtccg aatcctggag gttggcgagc
      421 ttcctgtctt ggttggattg gtcctggtct tccttgcgct tcgcgctctt tgaccatccg
      481 aattcaaaaa atactcccgc gcttctgtcg ccgtcgagcg gggctagtct aatggtagga
      541 cagaagcttc ccacggtctc gtgacctccg gatccgggcc ggaatgagct tctaacgcgg
      601 gttcgattcc cgcgccccgc acctcgttgc accttagctc gcggggatcg cggctactgg
      661 gatgtccgca ggcggcgagg cagccgcggt gctctccagc ttctgcacca tgcgtccgac
      721 tccgaatccg atgcctccgc taacgcctcc cgcgatgaag accgtgaacg agaagaggcc
      781 gacgaagagg ggatccatcg cgaatccacg aagcattaga tagacaacgt aaaacaggac
      841 cgcccaggcg cttcccgtca atgtcgccgc ggtgagtccg aatctctggg gtcgaaggac
      901 gcggaatgcg agatccacca caggcgcaag gaaaagaact gggggcggga gggcgaactg
      961 gcccacgatc atcagggaac gcaggcctgt gtacaccgcc gccgcaaggg tcgcgagacc
     1021 ggcgcgacgt ccggcgagca gggcgaggat gaggacggcg ggggtcgcaa gggacacggc
     1081 ggtcgggtag gcgattgcgt ctctcaggat ttggccgttg aacgtagtcg cgaaatccat
     1141 cggcccgagg aggacctgca gtccgaagag gagcaggcca acgccgatcc cgacggccat
     1201 gagccccaag cccgatctcg ccccgttcca tcgagtgcgc tccaagacga cggcgacgag
     1261 gaacccgaat gtgctgacaa tcccgcccgc aatcgccatc acgtggggcg ggctccagaa
     1321 ggtttccgtg accaggcctt cggccacgag gcggtgccac gcttcgtccc acgggaacgc
     1381 gagcgcctgg aagagcgcgc cggccccgat gagcaagaat tcgattggca cgaggaggcc
     1441 gacgatgcgg acccgaggac cggcccaccg cggtgcgctc gccccggcga cggatccgac
     1501 gattcccgcg agggcgacgg agccgaatcc tgcgtagagg acgagatgcg gcggggtgaa
     1561 aaagctctcc cggcccacga cgacatggcg ccagatgtcc caataca
//
LOCUS       DATLMA010000211         1261 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_864461, whole genome shotgun sequence.
ACCESSION   DATLMA010000211 DATLMA010000000
VERSION     DATLMA010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864461"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VNA10_02610"
     CDS             <1..799
                     /locus_tag="VNA10_02610"
                     /inference="COORDINATES: protein motif:HMM:NF013614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HVG36599.1"
                     /translation="EIRADYAKVEPFERNLIVADRGSDVTYIEGCTAPVYTPDQLHVS
                     GIEVIAMPGSHVLYIALQNFAREVDNLVTKRALVHEAAAVEWIDANLGSRRTWKIPRA
                     DLLGPGASAEFVGVALAGKDQYQDVGAEMIHTAPRTRSRIVNRGIVRGGGRTTLRTAV
                     RVAPGATGVESSVEWSSLMLDTESRSETVPAIELDEADAEIVQAGNVRKVSDEMLFYM
                     ASRGVTKEEALRMVVLGTAEVVTKRIPVEYAVEIDRLIELELGGGVG"
     gene            855..>1261
                     /locus_tag="VNA10_02615"
     CDS             855..>1261
                     /locus_tag="VNA10_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018196563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HVG36600.1"
                     /translation="MAKPAKVLLNVPAIKADFPILQRTVRDKRLVYLDSAATSQKPKQ
                     VIDATSDFYSRYNANVHRAIYELGEEATREYEGAREKVAAFIQAKSPMEIAFTKSTTE
                     SINLVAYGYGIKGKIQKGDEILGTVMEHHSNHVP"
BASE COUNT          250 a          390 c          425 g          196 t
ORIGIN      
        1 ggagatccgt gcggattacg caaaggtcga accgttcgag cggaacctca tcgtcgcgga
       61 tcggggctcc gacgtcacat acatcgaggg atgcaccgcg ccggtgtata cgccggacca
      121 gctgcacgtg tccggcatcg aggtcatcgc gatgcccgga tcccacgtgc tgtacatcgc
      181 cctgcagaac ttcgcgcgcg aggtggacaa cttggtgacg aagcgcgcgc tcgtccacga
      241 ggccgccgcg gtcgaatgga tcgacgcgaa cctgggttcc cgtcggacct ggaagattcc
      301 ccgggcggat ctcctcgggc ccggggcctc cgcggaattc gtcggggtgg ccctcgcggg
      361 gaaagatcaa taccaggacg tcggcgcgga gatgatccac acggccccgc ggacccgatc
      421 gaggatcgtc aaccgcggca tcgtccgcgg cggcggtcgg accacgttgc gtaccgcggt
      481 ccgcgtggcg ccgggggcca ccggcgtcga atcgagcgtc gaatggtcct cgttgatgct
      541 cgatacggag tcgcggtctg agaccgtccc ggcgatagaa ctcgacgagg cggacgccga
      601 gatcgtccag gccgggaacg tccgcaaggt gagcgacgag atgctcttct acatggcgtc
      661 tcgcggggtg acgaaggagg aggcccttcg gatggtcgtc ctcgggaccg ccgaggtcgt
      721 gacgaagcga atccccgtcg agtacgcggt cgaaatcgat cgcctcatcg aactggaact
      781 gggtggcggg gtcgggtgac gctcgttcgc aagaagactc aagtattgag ccggtcatgg
      841 taagggggca ccgcatggcg aaacccgcga aggtcctgtt gaacgtgccc gccatcaagg
      901 cggacttccc gatcctccag cggaccgtcc gggataagcg actcgtctat ctcgacagtg
      961 cggccacctc ccagaaaccg aagcaggtca tcgacgccac gtcggatttc tattcgcggt
     1021 acaacgcgaa cgtccaccgc gcgatctacg agctggggga agaggcgacg cgggagtacg
     1081 agggcgcgcg cgagaaggtc gccgccttca tccaggcgaa gtcgccgatg gagatcgcgt
     1141 tcacaaagtc cacgacggag tccatcaacc tcgtagccta cggctacgga atcaagggga
     1201 agatccagaa aggggacgag atcctcggga ccgtcatgga gcaccactct aaccacgtcc
     1261 c
//
LOCUS       DATLMA010000212         1556 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_263807, whole genome shotgun sequence.
ACCESSION   DATLMA010000212 DATLMA010000000
VERSION     DATLMA010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263807"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            140..658
                     /locus_tag="VNA10_02620"
     CDS             140..658
                     /locus_tag="VNA10_02620"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HVG36601.1"
                     /translation="MEVLEAIKSVKSVSKYKPDPIPEQKVQAVVNAARFALSADNLQP
                     WKFIVVSDEDAKRKLAGACTNGKHMADAPLVVVACARLDEAVAMIGGYMNSYPVDVGM
                     ALANVTVAATSEGLGTSWIFTFNEEKVKSLLKIPADAHVVGLTPLGIPEAYEAPAGRK
                     HLSEILAYNAYE"
     gene            695..>1556
                     /locus_tag="VNA10_02625"
     CDS             695..>1556
                     /locus_tag="VNA10_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36602.1"
                     /translation="MAQRALTPGNAAYCSECGAETPPDAKSCARCGEPFEGSMQAVLC
                     PICNSINPAAATECLNCNAKFPDPGLDETPAPAGLDPPEEEYLRRILQLSREKARRRG
                     ANGTDPGTEPASLLESDRAEGETEESLWKLAEPFDRMLERRKRRLEQMEALIDRAQGR
                     IKALESSADPAEVQEREELKQQIETLLLEKEDILKLEEGLVDMETTYRNILRMQKDEL
                     KAREASLRGRIAAFRHELESREKAFGQLKERESDFVRREDEFRTVMNRVHEREREIEK
                     REELMREKARL"
BASE COUNT          324 a          474 c          529 g          229 t
ORIGIN      
        1 atcgaaaacc ctagtcgtgc cgcagagccg cgcaggacct ggtggcggga aggatctgac
       61 cgcgagagac ggttgtgccc ctgatttcgt ggccgtaacg cttattatca ccacgccaaa
      121 tcggacggct cgggactaaa tggaggtcct tgaggccatt aagtcggtga agagcgtgag
      181 caagtacaag cccgatccga tccccgagca gaaagtccag gcggtggtga acgccgcgcg
      241 cttcgcgctg tccgcggaca acctccagcc ttggaagttc atcgtcgtct cggacgagga
      301 cgcgaagcgg aaactcgcgg gcgcctgcac gaacgggaag cacatggccg acgcgccctt
      361 ggtggtcgtc gcctgtgccc ggctcgacga ggcggtcgcg atgatcggcg gatacatgaa
      421 ctcgtatccg gtcgatgtgg gcatggccct tgcgaacgtc accgtggcgg caacgagtga
      481 ggggttgggg acctcctgga tcttcacctt caacgaggag aaggtgaaat ccctcctgaa
      541 aatcccggcc gacgcccacg tggtggggtt gacaccgttg ggcatcccgg aggcctacga
      601 ggccccggcg ggcaggaagc atctgtcgga aatcctcgcg tacaacgcgt acgaatgagc
      661 gatccggcat cccatcctcc tcgagcaggc atcgatggcc cagcgcgccc tcactcccgg
      721 caacgccgcc tactgcagcg aatgcggagc ggaaacgccg cccgacgcca aatcgtgcgc
      781 ccggtgcggc gagccgttcg aaggctcgat gcaggccgtc ctgtgcccga tctgcaattc
      841 gatcaatccc gccgccgcaa cggagtgcct gaactgcaac gcgaagttcc ctgatccggg
      901 actcgacgag accccggcgc ccgccggtct cgatcctccg gaggaggaat accttcggcg
      961 gatcttgcag ctgagccgcg agaaggcgcg gaggcgaggc gcgaacggaa ccgatccggg
     1021 gaccgagccc gcgtcactcc tcgaatccga tcgggccgag ggagaaacgg aggagtccct
     1081 gtggaagctc gcggagccgt tcgaccggat gctcgaacga cgcaagcgcc ggctggaaca
     1141 gatggaggca ttaatcgatc gggcccaggg acgcatcaag gcccttgagt cgtccgccga
     1201 cccggccgag gtgcaggagc gcgaggaact caaacagcag atcgagacgc tgctcctgga
     1261 gaaggaggac atcctgaagc tcgaggaagg tctcgtcgac atggagacga cctaccgcaa
     1321 catcttgcgg atgcagaagg acgagctgaa ggcgcgcgag gcgtccctcc gcggtcggat
     1381 cgccgcgttt cggcacgagc tggagtcgcg cgagaaggcg ttcggccagc tcaaggaacg
     1441 ggaatcggac ttcgtccggc gggaagacga gttccggacc gtcatgaatc gcgttcacga
     1501 gcgggagcgg gagatcgaga agcgggagga gctcatgcgg gaaaaggccc ggctca
//
LOCUS       DATLMA010000213         1254 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_864565, whole genome shotgun sequence.
ACCESSION   DATLMA010000213 DATLMA010000000
VERSION     DATLMA010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864565"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VNA10_02630"
     CDS             <1..489
                     /locus_tag="VNA10_02630"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HVG36603.1"
                     /translation="RLPFRSKSFDVATTNHVLHLIPDWRDALREIARVTRDMYFTVIE
                     RSDRVDTIKREYDALVKGAGYDWTHPGLHEKDLPGLLKPDFIMPVGPFRETLLADSTL
                     DELDRRTYSSQWDVPEEIHRKAMEPLRAKWRGKEFQLSYTLEVTFWRSEMLREIVKDQ
                     RS"
     gene            complement(477..>1254)
                     /gene="dph5"
                     /locus_tag="VNA10_02635"
     CDS             complement(477..>1254)
                     /gene="dph5"
                     /locus_tag="VNA10_02635"
                     /EC_number="2.1.1.98"
                     /inference="COORDINATES: protein motif:HMM:TIGR00522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004164 - diphthine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="diphthine synthase"
                     /protein_id="HVG36604.1"
                     /translation="GELVFIGLGLDDEKGITLRGLDEARSADVVFAELYTSALPGASL
                     EAVEKLIDRKVRRLTRQEVEDGQVLLAAAAKGAVAFLVPGDPMTATTHVDLRLRAAAA
                     RIRTRIVHGVSILTSAAGALGLQAYKFGRTTTVPFPSEGFAPTSPLEAILANRTAGLH
                     TLVLLDLREDGTFLAPRDALVSLLRMGSSIGTTEFGPHTLACVLSRVGSPEVLAFAGP
                     IAKLADRDLGPPPHCLVIPGTLHFLEKEALVAFAGAPHDL"
BASE COUNT          241 a          413 c          402 g          198 t
ORIGIN      
        1 cgccttccgt tccgctcgaa atccttcgat gtcgcaacca cgaaccatgt cctccatctc
       61 atcccggact ggcgggacgc gctgagggaa atcgcccgcg tcacccgcga catgtacttc
      121 acggtcattg agcgctcgga ccgcgtcgac acgatcaaac gggagtacga cgcgctcgtc
      181 aagggagccg gctacgattg gacccatccc gggctccacg agaaggactt gcccggactc
      241 ctcaaaccgg acttcatcat gccggtcggg ccgttccggg agaccctcct cgcagactcc
      301 accttggacg aactcgatcg gcggacctat tcgtcgcaat gggatgttcc ggaggagatt
      361 caccgcaagg caatggagcc tctccgtgcc aaatggaggg ggaaggaatt ccaattgtcg
      421 tacaccctcg aagtcacgtt ctggcgttcg gaaatgctgc gggaaatcgt gaaggatcag
      481 aggtcgtgag gcgcgcccgc gaacgcgacc agcgcctctt tctcgaggaa gtgaagcgtc
      541 cccgggatca cgagacaatg gggcggcggc ccgaggtcgc ggtccgcgag tttggcgatg
      601 ggtcccgcga acgcgagcac ctcgggtgag ccgactcggc tcaggacgca ggcaagggtg
      661 tgcgggccga actcggtcgt gccgatggaa gagcccatcc gcaacagcga cacaagcgca
      721 tcccgcggcg caaggaacgt cccgtcctcc cggaggtcta aaagaaccag cgtatggagt
      781 cccgcggtcc gattcgcgag gatcgcctcg agtgggctcg ttggagcgaa cccctcagaa
      841 gggaacggga ccgtcgtcgt ccgaccgaac ttgtacgctt ggaggcctag cgcccccgcg
      901 gccgacgtca gaatcgagac tccgtgcacg atgcgagtgc gaatcctcgc tgccgcggcc
      961 cgcaggcgca gatcgacgtg ggtcgtggcg gtcatcggat cgcccgggac gaggaacgca
     1021 accgcgccct tcgcggccgc ggcgaggagg acctggccgt cctccacctc ctggcgggta
     1081 agccgacgga ccttccggtc gatgagcttc tccaccgctt cgagcgatgc accgggcaag
     1141 gccgacgtgt agagctcggc gaacacgacg tcggccgacc gagcctcgtc gagcccgcgg
     1201 agggtaatcc ctttctcgtc gtccaatccc agtccgatga agacgagctc cccc
//
LOCUS       DATLMA010000214         1422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_806779, whole genome shotgun sequence.
ACCESSION   DATLMA010000214 DATLMA010000000
VERSION     DATLMA010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806779"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1117)
                     /locus_tag="VNA10_02640"
     CDS             complement(38..1117)
                     /locus_tag="VNA10_02640"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007222721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HVG36605.1"
                     /translation="MELNFGPQHPSTHGVLRVVLKVDGEKILEAKPDVGFLHRGTEKL
                     FETETYPMGIPHTDRMDYVAAATNNHAFCLTIEKLLAVEIPRRAQLIRVILDELQRLS
                     SHLVWLGTSGLDLGAVTPFWYAFREREQILDFFEEYCGARLTLNCMRIGGLPFDLTAG
                     WIERLMEFLDDLPSRIDDYEQLLTDNRIWKKRTVGIGVISGQECIEWGVTGPVLRASG
                     VEWDLRRAQPYECYDELDFAIPTRVNGDTYDRYIVRVQEMRQSVRILKQCIDLLEPGE
                     FRGKVPRVIKPIAEEVYASIESPKGELGFYCVSNGTNRPYRMHVRPPSFINLQALPRL
                     AKGHLVSDLVALIGTIDIVLGEVDR"
BASE COUNT          230 a          472 c          471 g          249 t
ORIGIN      
        1 acgaccttca ggtaggtcca gaactcgggc gtcagtctca ccggtcgacc tcgcccagca
       61 cgatgtcgat cgtgccgatc agggcgacca gatccgaaac cagatggccc ttcgccaggc
      121 gcgggagcgc ctgcaggttg atgaaggacg gcggccgcac gtgcatccgg taaggccggt
      181 tcgttccgtt ggagacgcag tagaacccga gctccccttt cggggactcg atcgacgcgt
      241 acacctcttc ggcgatcggc ttgatgacac gcgggacctt gccgcgaaac tcacccggct
      301 cgaggaggtc gatgcactgc ttcaggatgc ggacgctctg gcgcatctcc tgcacgcgga
      361 cgatgtatcg gtcgtacgtg tcgccgttca cccgcgtcgg gatcgcgaag tcgagctcgt
      421 cgtagcactc gtacggctgg gcgcgccgaa ggtcccattc cacgccggag gcgcggagca
      481 ccgggccggt gactccccac tcgatgcatt cctgcccgga gatgacgccg attccgaccg
      541 tccgcttctt ccagatccga ttgtccgtca ggagctgctc gtagtcgtcg atgcgcgacg
      601 gcaggtcgtc gaggaactcc atcaggcgct cgatccagcc ggcggtcaag tcgaacggca
      661 gcccgccgat ccgcatgcag ttcagggtga gccgtgcgcc gcagtactcc tcgaaaaagt
      721 cgaggatctg ctcccgctcc cggaaggcgt accagaacgg ggtgaccgct ccgaggtcga
      781 ggcccgaggt cccgagccag acgaggtggg aagagagccg ctggagctcg tccaggatga
      841 ctcggatcaa ctgggcccgg cgcgggatct cgacggcgag gagcttctcg atcgtcaggc
      901 aaaaggcgtg gttgttcgtc gccgccgcga cgtagtccat ccggtcggtg tgcgggatcc
      961 ccatcgggta ggtctcggtc tcgaagagct tctcggtgcc gcggtggagg aagcccacgt
     1021 ccggcttcgc ctcgaggatc ttctcgccgt ccaccttcag cacgacgcgc aacacgccgt
     1081 gcgtcgaggg gtgctggggg ccgaagttca actccatctc ctggacttcg aagagagtcg
     1141 gggcgtgagg tgtctccgca accccttcga gcggtcgggc caccccgccc tccgtcgcgc
     1201 gacgcgcgaa gtaggcggcc tcgtcccttt ccgcctgcgt cagccgcttc tcgtcggtca
     1261 cgaaaccgcc ttccgattcg gatcgtctgg cgaagggccg cccccttcgg gccattcctc
     1321 cgggtagatc gcggcgccgg tgtcgatccc ctcgacgggg aagtccttgc gcagcggata
     1381 gccgtggaag ccttcccagg tcaggatccg gcgcaggtcg gg
//
LOCUS       DATLMA010000215         1587 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_746822, whole genome shotgun sequence.
ACCESSION   DATLMA010000215 DATLMA010000000
VERSION     DATLMA010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_746822"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VNA10_02645"
     CDS             <1..347
                     /locus_tag="VNA10_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36606.1"
                     /translation="PIAPAPAFDLEQNLETFRRLLALKPRGLLFSHYGPHTKPKAAIE
                     AMMAAYPAWDRIVQDKLASIGEDGVVRELYDMSCRAAKRYPRDFLERRIRVSITGLAA
                     YHERMEHAARTS"
     gene            328..1188
                     /locus_tag="VNA10_02650"
     CDS             328..1188
                     /locus_tag="VNA10_02650"
                     /inference="COORDINATES: protein motif:HMM:NF013197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36607.1"
                     /translation="MLPAPVEETIRSIAEDRTSGASKLARLALDAMGLAVVEAKGHPD
                     PKELAEVARRLSDAQPAMAIVHNVAHLVARLISEGLDPRSVLGEVRTELDHARDRIAR
                     TFLKVVPPHATIITLSHSDNVLEAIKMAHGRGHVNRAYVLESGPLFEGRTLASALSDA
                     GVPSMAVPDAEGASLMPRASCALVGADSVLRDGAVVNKVGTLALARAAVDRKKPFYVA
                     CETLKFDARYDAATWPGLRIPTMSSTFEVTPPELITTTVTERGTYTPEIIRTMLSPGR
                     DGRRPGVAES"
     gene            1215..>1587
                     /locus_tag="VNA10_02655"
     CDS             1215..>1587
                     /locus_tag="VNA10_02655"
                     /inference="COORDINATES: protein motif:HMM:NF015690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HVG36608.1"
                     /translation="MVEPEPPAGLDPVDQGIRLFNEEYFFEAHEVLEDLWKREHGKPK
                     LFLQGLIQICAAYHHFQNRNLIGAETLLERGAQKMRAYPADYLGIDAAKLLAHVDQDR
                     ERIGRMQRGEEENKVLEFPRME"
BASE COUNT          302 a          523 c          521 g          241 t
ORIGIN      
        1 tgccgatcgc cccggccccc gccttcgact tggagcaaaa cctcgagacg ttccgacggc
       61 tgctcgccct caagccgcgc ggtctcctct tcagtcacta cggaccccac acgaaaccga
      121 aggccgcgat cgaggcgatg atggcggcat acccggcctg ggaccgaatc gtccaggaca
      181 agctggcgtc aatcggcgag gacggcgtcg tccgcgagtt gtacgacatg agctgccgcg
      241 ccgcgaaacg ttacccgcgg gatttcctcg agcgtcggat ccgcgtgagc atcaccggcc
      301 tcgcggcgta tcacgagcgg atggagcatg ctgcccgcac cagttgagga gacgatccgc
      361 tccatcgcgg aggaccggac gagcggtgcg tcgaagctcg cgcgcctcgc cctcgacgcg
      421 atggggctcg ccgtcgtcga ggcgaaaggc catccggacc cgaaggagct ggcggaagtc
      481 gcaaggcgtc tctcggacgc gcaaccggcg atggccatcg tccacaacgt ggcacacctc
      541 gtcgcgcgac tcatctccga gggactcgat ccgcggtccg tcttggggga ggtccggacc
      601 gagctcgatc atgcacgaga tcggattgcg cggacgttcc tgaaggtcgt gccgcctcac
      661 gcgacgatca tcacactcag ccacagcgac aatgtgctcg aggcgatcaa gatggcccac
      721 ggccgcggac acgtgaaccg cgcatatgtc ctggagtccg ggcccctgtt cgagggaagg
      781 acgctggcaa gtgccctctc ggatgccgga gtcccctcca tggcggtccc ggatgcggaa
      841 ggcgcctcgc tcatgccccg ggcgtcgtgc gccctggtgg gggcggacag cgtgctccga
      901 gacggagccg tcgtcaacaa ggtcggcacg ctcgcgttgg cccgcgccgc ggtagaccgc
      961 aagaaaccgt tctatgtcgc atgcgagacg ctgaaattcg acgcccgata cgacgcggcc
     1021 acctggccgg gcttgcgcat ccctacgatg agttcgacgt tcgaggtcac gccgccagaa
     1081 ctcatcacca cgacggtgac ggaacgggga acgtacacgc ccgagatcat ccggacgatg
     1141 ctctcccccg gacgagacgg ccgccgaccc ggcgtggcgg aaagttgatt gtcgcgatgg
     1201 tcttccgttc gctgatggtg gaaccggaac cgccggcggg cctggacccc gtcgaccagg
     1261 ggatccgcct gttcaacgag gaatacttct tcgaggccca cgaggtcctg gaggacctct
     1321 ggaagcgaga gcacggcaag ccgaagctgt tcctccaggg gctcatccaa atctgtgcgg
     1381 cataccacca tttccagaac aggaatttga tcggagccga gacgttgctc gaacgggggg
     1441 ctcaaaagat gcgagcgtat cccgcggact acctcggcat cgacgccgcc aagctgctcg
     1501 cccatgtgga ccaggaccga gagcggatcg ggaggatgca gcgcggcgag gaggagaaca
     1561 aggtcctcga gttcccgcgc atggaac
//
LOCUS       DATLMA010000216         1629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_865018, whole genome shotgun sequence.
ACCESSION   DATLMA010000216 DATLMA010000000
VERSION     DATLMA010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865018"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VNA10_02660"
     CDS             complement(<1..710)
                     /locus_tag="VNA10_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007044428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HVG36609.1"
                     /translation="MAIEEQIKAVEDEIQKTPYNKATQHHIGRLKAKLARLKDEQETR
                     RLKGGGGGPSYAVKKSGNATVGLVGFPSVGKSTLLNQITDATSEVAAYDFTTLDVIPG
                     LMEHRGAKIQVLDMPGLIRGASKGRGRGKEVLSVARACDLILLMIDVFETHVDVLADE
                     LHLAGIRLNERPADVTLTKANRGGLTVNPTVKLTKLDAEMVADICREWGYLNGTVVVR
                     QDITEDQLIDVLAGNRVYL"
     gene            complement(749..1129)
                     /locus_tag="VNA10_02665"
     CDS             complement(749..1129)
                     /locus_tag="VNA10_02665"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG36610.1"
                     /translation="MTKSTSGPLTDARLATVFLWVRDFKRMRAFYHETLGLPIDYENP
                     HFADFRAGGCSIALHSEREPHARGDSWHMEFLVEDIDAVVTELSHRGVDVAPIRSESF
                     GRITTFRDPEGNEIGLEEPAKRGR"
     gene            complement(1177..>1629)
                     /locus_tag="VNA10_02670"
     CDS             complement(1177..>1629)
                     /locus_tag="VNA10_02670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36611.1"
                     /translation="AAVSMFTSFGYFDRPEEDRQVLRGIARALRPRGKFLMELFNRDS
                     LVARLPSQSWQARDDSTVVLEDASFDLLRGRFETRQIIIDKKGTREFTASVRAYTLAE
                     LKEMLDAEGLFVHRVLGGLDSSPYAARSQRMVLYAVKGLEPEGIRTMW"
BASE COUNT          267 a          549 c          509 g          304 t
ORIGIN      
        1 aggtagacgc ggttccccgc gaggacgtcg atgagctggt cctccgtgat gtcctgccgc
       61 acgacgacgg tgccgttcag gtagccccac tcccggcaga tgtccgcgac catttcggcg
      121 tcgagcttcg tcagcttgac cgtcggattc acggtgagcc cgccgcggtt ggctttcgtc
      181 agcgtgacgt ccgcgggccg ctcgttcagg cgaatccccg cgagatgcag ttcgtccgcg
      241 aggacatcga cgtgagtctc gaagacgtcg atcatcagga ggatcaggtc gcatgcgcgg
      301 gccacggaca ggacctcctt cccgcgaccg cggcccttcg acgcgcctcg gatgagcccg
      361 ggcatgtcga gcacctggat cttcgccccg cggtgctcca tgaggccggg gatcacgtcc
      421 agcgtcgtga agtcgtacgc ggcgacctcg ctcgtcgcgt ccgtgatctg attcaggagg
      481 gtcgactttc cgacgctcgg gaagccgacg agcccgaccg tcgcgttgcc gctcttcttg
      541 accgcgtagc tcggaccacc gccgcccccc ttgagacgcc tcgtctcctg ctcgtccttg
      601 aggcgcgcca gcttcgcctt cagccgcccg atgtgatgct gggtcgcctt gttgtacggc
      661 gtcttctgga tctcgtcctc gaccgccttg atctgttcct caatcgccat cgatgtgaat
      721 gcgagcgggt cggaccacta aaaacctttc aacgcccgcg cttcgcgggt tcctcgagcc
      781 cgatctcgtt cccctccgga tcccggaagg tggtgatccg accgaaactc tcggatcgaa
      841 tcggggccac atccaccccg cgatgcgaga gttcggtcac cacggcgtcg atatcttcca
      901 cgaggaattc catgtgccag ctgtcgcccc gggcatgcgg ttcgcgttcc gagtggagcg
      961 caatcgaaca gccgcccgcg cggaagtcgg cgaagtgcgg gttctcgtag tcgattggga
     1021 ggccgagcgt ctcgtgatag aaggcccgca tccgcttgaa atcgcggacc cacaggaaca
     1081 ccgtcgcgag cctcgcatcg gtcaacggtc cggacgtcga tttcgtcatc gcgtcaccac
     1141 ggggacatgg ggccacgacg agaaaagcgt cttcccctac cacatggtgc gaatgccttc
     1201 gggctccagg cccttgaccg cgtacaggac catccgctgg gagcgggccg cgtacggcga
     1261 cgagtcgagg cctccgagga cgcgatggac gaagaggcct tcggcgtcga gcatctcctt
     1321 gagctccgcg agggtgtacg cgcggacgga cgccgtgaat tcccgtgtcc ctttcttgtc
     1381 gatgatgatt tggcgcgtct cgaaccgccc ccggaggagg tcgaacgagg catcctcgag
     1441 gacgacggtg ctatcgtccc gggcctgcca gctctgcgac ggcaacctcg ccacgaggct
     1501 atcgcggttg aacagttcca tcaggaattt tccccgcggc cgcaacgccc gggcgatccc
     1561 gcgcaagacc tgacggtcct cttccggccg atcgaagtat ccgaacgagg tgaacatcga
     1621 gacggccgc
//
LOCUS       DATLMA010000217         1095 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_142267, whole genome shotgun sequence.
ACCESSION   DATLMA010000217 DATLMA010000000
VERSION     DATLMA010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142267"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VNA10_02675"
     CDS             complement(<1..196)
                     /locus_tag="VNA10_02675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36612.1"
                     /translation="MRQSIDSCLAGTDFSAESPGRAYNGDRANGLQSRQLGLQGMDFL
                     GPFPQEFRAGCFVILGQLFVG"
     gene            complement(285..884)
                     /gene="trmY"
                     /locus_tag="VNA10_02680"
     CDS             complement(285..884)
                     /gene="trmY"
                     /locus_tag="VNA10_02680"
                     /inference="COORDINATES: protein motif:HMM:NF002560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (pseudouridine(54)-N(1))-methyltransferase
                     TrmY"
                     /protein_id="HVG36613.1"
                     /translation="MGHPIVVRRFLIVGHRASTDPAFSLDDLAGAAGRMDILLNAANA
                     ALLLAHDLRRDVEVGLLLLGPPDPPRLVRLEAFRLRSYQPDIRSNAALVRRALQDASR
                     IERETSPGVFGSKTTFEEALDRLGPSFVYAKEGGKDVREANLPADATFVFSDNQDLAA
                     AEERTLTDRGALVIGLGPLTLHTDHAIAVLQNELDRRHV"
     gene            complement(912..>1095)
                     /locus_tag="VNA10_02685"
     CDS             complement(912..>1095)
                     /locus_tag="VNA10_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36614.1"
                     /translation="WSGSIYRCSPIRRPNETESVRWIPRAEALRLPLVPFHRDAIEAL
                     AGIESFESTDNIQMGE"
BASE COUNT          210 a          346 c          346 g          193 t
ORIGIN      
        1 ggcccacgaa gagttgcccg agaattacga agcagcccgc gcggaactcc tgagggaacg
       61 gaccgaggaa atccatgcct tgcaagccaa gttggcgaga ttgcagtccg ttcgcccgat
      121 ccccgttgta cgctcttcca ggcgactccg ccgagaagtc cgtacctgcg agacacgaat
      181 caatcgactg acgcacgagc tttccgccct cgagtcctaa tccgtcgtct aggcgcggga
      241 ttagagcttt tggcggcggc ttgcgcggcg ccccggtggc ctggtcacac gtgtctccga
      301 tccagttcgt tctgaaggac cgcgattgcg tgatccgtat gcagtgtcaa cggaccaagc
      361 ccgatgacca aggcgccacg atccgttagg gttcgttcct cggccgccgc caaatcctgg
      421 ttgtccgaga atacgaacgt cgcgtcggca gggaggttcg cctcccggac gtctttgccg
      481 ccctccttgg cgtacacgaa cgatggaccg aggcgatcga gcgcctcctc gaacgtcgtc
      541 ttcgaaccga acacgcccgg agaggtctcc cgttcgatcc gagaggcatc ctgcaacgcg
      601 cggcgcacga gtgcggcgtt gctccggatg tccggttggt agctccgaag ccggaacgct
      661 tcgaggcgaa cgagtcgcgg cgggtccggt ggacccaaga ggaggagacc gacttccacg
      721 tcgcgacgga gatcatgggc gaggaggagc gccgcgtttg ccgcgttcag gagtatgtcc
      781 atccggcctg ccgcaccggc caagtcatcg agcgaaaagg ccggatccgt ggaggcccga
      841 tggccgacga tcaggaaacg tcgcacgaca atcggatggc ccatttccgc ttaagggttc
      901 gggggcgata tttattctcc catctggata ttatcggtgc tctcgaacga ctcgatcccc
      961 gcgagcgcct cgatcgcgtc ccggtgaaac ggcacgaggg gaagccgcaa cgcctccgct
     1021 cgaggaatcc agcggaccga ctcggtctcg ttcggacgtc gaatcggcga gcagcggtag
     1081 atcgatccgg accac
//
LOCUS       DATLMA010000218         1352 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_142279, whole genome shotgun sequence.
ACCESSION   DATLMA010000218 DATLMA010000000
VERSION     DATLMA010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142279"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VNA10_02690"
     CDS             <1..347
                     /locus_tag="VNA10_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015412533.1"
                     /note="negatively supercoils closed circular
                     double-stranded DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HVG36615.1"
                     /translation="LLDSGFVYIAQPPLYKVKKGKELHYAYTEKQREDLAKKLGDKGV
                     VYQRFKGLGEMNAEELWETTMDPARRQLKQVMIEDAATADALFSILMGEAVEPRRQYI
                     QEHAKEVVNLDI"
     gene            355..>1352
                     /locus_tag="VNA10_02695"
     CDS             355..>1352
                     /locus_tag="VNA10_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012157892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HVG36616.1"
                     /translation="MPEEAQESRPHVSPQPIEDELHRSYIDYAMSVIVGRALPDVRDG
                     LKPVQRRILFAMNELGMSSGSQHKKAARVVGETLGKLHPHGDLSIYDALARMVQPFSL
                     RYPLIDGQGNWGSTEDEPAAMRYTECRLAKTAEAMLEDLEKDTVDWMDNFDGTLKEPL
                     VLPSKFPNLLVNGSSGIAVGMATNIPPHNLREIVDALIVLIEKPNAELIDLYNPETGP
                     IRGPDFPTGGILYGAEGVADAYRVGRGLIRIRAKAKYEEAGHDRVRIVITEIPYMVSK
                     AALVESIALLVKSKKIEGVTDLRDESDREGMRIVLELKRDAIEDVVLNQLYHHTQM"
BASE COUNT          319 a          393 c          408 g          232 t
ORIGIN      
        1 cgctcctcga tagcgggttc gtgtacatcg cgcagccgcc cttgtacaag gtcaagaagg
       61 gcaaggaact ccactacgcg tacacggaga agcagcgcga agacctcgcg aagaagctcg
      121 gtgataaagg tgtcgtgtac cagcggttca agggcctcgg ggagatgaac gccgaggaac
      181 tttgggagac gacaatggat cccgcccgac gtcaactgaa gcaagtaatg atcgaggacg
      241 ccgcgaccgc ggatgcgctt ttctcgatcc tcatggggga ggcggtcgag cctcgccggc
      301 aatacatcca ggaacacgcg aaggaagtcg tgaacctgga catctaggag gaccatgccg
      361 gaagaagccc aagagtctcg tccccacgtc tccccgcaac caatcgaaga tgaactccac
      421 cgatcgtaca tcgactacgc gatgagtgta atcgtcgggc gagcactgcc cgacgttcgc
      481 gacggtctga aacccgttca acgccgcatc ttgtttgcaa tgaacgagtt agggatgagt
      541 tcaggctccc agcacaagaa ggcagcccgt gtagtcgggg agacattggg aaaactccac
      601 ccgcatggag acctctccat ctatgatgcg ttagcccgaa tggtccaacc gttttccctt
      661 cgctatccgc tgatcgacgg tcaggggaac tgggggagca ccgaagacga gcccgccgcc
      721 atgcggtaca cggagtgccg cctcgcgaag acggccgagg cgatgctcga ggacctcgag
      781 aaggacacgg tggactggat ggacaatttt gatgggactc tgaaggagcc tctcgtcctt
      841 ccatcgaaat ttccgaatct cctcgtgaac ggatcgagcg ggatcgcggt cggaatggcg
      901 acgaacatcc ccccgcacaa tctccgggaa atcgttgatg ccctcatcgt cctcatcgaa
      961 aaaccgaacg ccgagctaat tgacctgtac aacccggaga cgggtccgat ccgcggtccg
     1021 gactttccca ccggcgggat cctctacggt gccgaagggg tcgcggatgc ctaccgggtc
     1081 ggacgcggcc tcattcggat ccgggcgaag gcgaaatacg aggaggcggg ccacgatcgt
     1141 gtacgaatcg tcatcacgga aatcccctac atggtgagca aggctgccct cgtggaatca
     1201 atcgctttgc tcgtcaagtc gaaaaagatc gagggcgtga cggacctccg cgatgagagc
     1261 gaccgtgaag gcatgcggat cgtcctcgaa ctcaagcgcg atgcgatcga ggacgtcgtc
     1321 ctgaaccagc tgtaccatca cacgcagatg ga
//
LOCUS       DATLMA010000219         1292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_322156, whole genome shotgun sequence.
ACCESSION   DATLMA010000219 DATLMA010000000
VERSION     DATLMA010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322156"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            309..620
                     /locus_tag="VNA10_02700"
     CDS             309..620
                     /locus_tag="VNA10_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36617.1"
                     /translation="MVRRSTIKWVREGKANGRESGFIVTWDVNSTDRAVAHRLQRFVY
                     GDTARSNGRQYRYAGFIEKTGVRYLGQSVIFVRPHLLGELVDFLSRTRIEHEVTAAAV
                     G"
     gene            809..>1292
                     /locus_tag="VNA10_02705"
     CDS             809..>1292
                     /locus_tag="VNA10_02705"
                     /inference="COORDINATES: protein motif:HMM:NF040197.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5781 family protein"
                     /protein_id="HVG36618.1"
                     /translation="MLTAVVDRSGRGGTRQVKAAFEDVAARYAEHGLRVSWPVSAEIV
                     SMAIMGATKSKDSSHTLFVSARAVESGVLDGLIAHEMGHMLRTESGHASHSAEVFRAL
                     TREVRIPRAAEGAFSNAFNHIQDIYADDLAFLVFSTDGDDRAYEFFSQWIEGNASMRG
                     R"
BASE COUNT          236 a          392 c          392 g          272 t
ORIGIN      
        1 gatggtactt cgcggactgc tccttcggga ggttcgcccg cttcaggttc tcttccactt
       61 ccttgggagt cggcgctttc acgcctttgt cgcccacgcg cttcttcgtg gccaccatgg
      121 aagcaccaag agaggacgcg aagagagttc cgggctcgct taaacctttg gaccgatcgc
      181 ttcgcccgga gtaacagacc ccgattcact cggaccatgg ccgattttca ctttcggtca
      241 tctctcccgc acgaaggaag atggactcag gcactcttcg gacatctatc cgaagaaagg
      301 cgaggattat ggtccggaga tctacgatca aatgggtgcg cgagggcaag gccaatggac
      361 gagaatccgg gttcatcgtg acatgggacg tgaacagcac cgatcgggca gtggcccacc
      421 gcctccagcg attcgtgtac ggcgacacgg cccgatccaa cgggagacag taccggtatg
      481 ccggattcat cgagaagaca ggtgttcgct atcttggtca gtcggtcatc ttcgtgcgcc
      541 cgcatctgct gggtgaactc gtcgacttct tgtcgaggac tcggatcgag cacgaggtga
      601 ccgctgccgc cgttgggtag gttcgggcat ctacccgaaa acgcacggtc cacaggagag
      661 ggccaccctg gtcgacttcg ggcttttgtc cgaaactcct agccagtccc gcgttcgcat
      721 ccttccttgc ctctgctggt ctgatatttt cgggcacatg tccgaagacc cgcaaaggtt
      781 tttccggatc cctcgcgtgg cccggcacgt gcttacagcg gtggtggatc gttccggtcg
      841 gggtggcact cggcaagtga aggccgcctt cgaggacgtg gctgctagat atgccgaaca
      901 tggccttcgc gtgtcttggc ccgtgtccgc cgaaattgtt tcgatggcga tcatgggggc
      961 aacgaagtcg aaggattcct cgcacacgtt gttcgtgtcc gcccgcgccg tcgaatccgg
     1021 cgtcctcgac ggcctcatcg cgcatgagat gggccacatg ctccggaccg aatcggggca
     1081 cgcgtcccac agcgccgagg tgtttcgagc gttgacccgc gaagtgcgga tcccgcgggc
     1141 ggccgaaggc gccttctcga acgccttcaa ccacatccaa gacatctacg ccgatgatct
     1201 cgcgttcctc gtgttctcga cggacgggga cgaccgcgca tacgagttct tctcgcaatg
     1261 gattgagggc aacgcctcga tgcggggacg ga
//
LOCUS       DATLMA010000220         1596 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_383840, whole genome shotgun sequence.
ACCESSION   DATLMA010000220 DATLMA010000000
VERSION     DATLMA010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383840"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..966)
                     /locus_tag="VNA10_02710"
     CDS             complement(124..966)
                     /locus_tag="VNA10_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011959189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HVG36619.1"
                     /translation="MSDPLRTVLVRRPDAAFGAADPKQWGYTAKPNLVAAQREHGRLI
                     DLLKQSSVDVRYHEDPQPGKADSIFVHDPAIVTDRGAVILRMGKELRRGEEESMARTF
                     KALQVPILARLHGNATAEGGDLLWVNHDLLAVGQGFRTNADGLSQIQETMRGIGVGVE
                     AVPLPYFQGPDACLHLMSLISLIDDDLAVIYPRLFPVPFWKWLREHGFEFVEVPDEEF
                     NTMAPNVLAVGPRDCIVLEGNPITRKRLEASGCRVRTYRGKEISLKAEGGATCLTRPV
                     LRSK"
     gene            1190..>1596
                     /locus_tag="VNA10_02715"
     CDS             1190..>1596
                     /locus_tag="VNA10_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010524389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein T"
                     /protein_id="HVG36620.1"
                     /translation="MIPGHVRDGVMTEATNDYAGPILPGFRETAWIQKSPYFHRAAKH
                     GVRAYDLYNHMLMPGLYTDPVEEYWHLVNHVTLWDVGVERQVEIDGPDGFEFMQMLTP
                     RDMEKCAVGECKYVLLTTPDGGIINDPVLLRLG"
BASE COUNT          291 a          499 c          504 g          302 t
ORIGIN      
        1 cggctcacga tcgcgacttc tgcgggggag cgcgacgcca tcgtcgtcaa gaagccgttc
       61 gtcgatccga agaagtcgat cccgaaatcg tagcgcgcga acggccctgg cgtcggttcg
      121 agatcacttc gaccgaagga cgggtcgcgt caagcaggtc gcgccgcctt cggccttgag
      181 ggagatttcc ttcccgcgat aagtccggac gcgacacccg gaggcctcga ggcgcttgcg
      241 ggtgatcggg tttccttcga ggacgatgca atcccggggc ccgaccgcga gcacgttcgg
      301 cgccatcgtg ttgaactcct cgtccgggac ttcgacgaat tcgaacccat gctcccggag
      361 ccacttccag aatgggaccg ggaagaggcg tgggtagatt accgcgaggt cgtcatcgat
      421 gaggctgatg agggacatca ggtggaggca cgcgtccggg ccttggaaat acggcagcgg
      481 gacggcctcc accccgacgc cgatgcctct catggtctcc tggatctggc tcaggccgtc
      541 ggcgttcgtt cggaatcctt ggccgaccgc caacaagtcg tgattcaccc agaggagatc
      601 gccgccttcc gccgtcgcat tgccatggag ccgcgcgagg atcggcactt gaagcgcctt
      661 gaacgttcgg gccatcgatt cttcttcgcc tcgccggagt tcctttccca tccggaggat
      721 gaccgccccg cggtcggtga cgatggcggg atcgtgcacg aagatcgaat ccgccttccc
      781 cggctgcggg tcctcgtgat atcggacgtc gaccgaggat tgcttcaaca ggtcgatgag
      841 ccggccgtgc tctctctgag ccgcaacgag gttgggtttc gcggtgtacc cccattgctt
      901 cgggtcggcc gcgccgaatg ccgcgtcggg tcgccgcaca agaaccgtgc ggagcggatc
      961 cgacatgctc tggcttccat agttccgtgt caggctggtc ctccgagttt ggaaagggtc
     1021 ccgccttctt acggtttccc cccacggatc gtcgtcaaga agccattcat cgatccgagg
     1081 aaggaaacgc cgaaggcgtg attccacctt ggatggacga ttgattccgc gcttcgccaa
     1141 aacgctcatc tagctttcca gcttccgggt cccaaaatca ggaggtggta tgatccccgg
     1201 ccacgtgcgc gacggcgtga tgacggaagc gacgaacgac tacgcgggac cgatcctccc
     1261 gggattccgg gagacggcat ggatccagaa atcgccgtac ttccatcgcg ccgcgaagca
     1321 tggcgttcgg gcgtacgacc tctataatca catgctcatg cccggcctct acacggaccc
     1381 ggtcgaagag tactggcatc tcgtgaatca cgtgacccta tgggacgtcg gcgtggagcg
     1441 gcaagtcgag attgacggcc cggacggatt cgagttcatg caaatgctga cgccgcgtga
     1501 catggagaag tgcgccgtcg gggagtgcaa gtacgtgctc ctcacgactc cggacggcgg
     1561 gatcatcaac gacccggtcc tcctccgcct cgggga
//
LOCUS       DATLMA010000221         1006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_808369, whole genome shotgun sequence.
ACCESSION   DATLMA010000221 DATLMA010000000
VERSION     DATLMA010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808369"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1006
                     /locus_tag="VNA10_02720"
     CDS             <1..>1006
                     /locus_tag="VNA10_02720"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36621.1"
                     /translation="TVARPADKALWYMRGFAEERAGEFDAAVGSYDEALRLDARDKVT
                     WNSKGLALVHLKRFDEALRAFDAALALDPAYEPAQSGKKTAEDRIHIAKIEGFAENVV
                     RFEKHLARPATRDEIFRYCSVPLEDLDEVIAYVNEPAPLAPDRIEADDLRKYEAVGAA
                     VLRTVENAKNLNTLRLTDVSAVLPHVDLEEARTIWGYIDWVRDAPLEPTPEWHNDELI
                     RQAMDLPKEEWNLVDLAKELHLGPFEAKKLEVSLKIFEGGGYKISTRIAPELKRKKPK
                     PEAVPETAGEDDHEAPVAKKPPTPKAVGKVADDAPPAKCAPHHAPGVERHACGAWLCK
                     G"
BASE COUNT          217 a          335 c          322 g          132 t
ORIGIN      
        1 acggtcgcgc ggccggccga caaggcgctg tggtacatgc gaggattcgc ggaagagcgg
       61 gccggcgagt tcgatgccgc ggtcgggtcg tacgacgagg cgctccgcct cgacgcccgc
      121 gacaaggtca cctggaacag caaaggctta gcgctcgtgc acctgaagcg cttcgacgaa
      181 gcgctccgcg cgttcgatgc ggcgctcgcc ctcgatcccg cgtacgaacc cgcgcaatcc
      241 ggcaagaaga ccgcggaaga ccggatccac attgcgaaga tcgaaggttt cgcggaaaac
      301 gtcgtgcgat tcgaaaaaca cctcgcccgc ccggcgacgc gcgacgaaat cttccggtat
      361 tgttccgtcc cgctcgaaga cctcgacgag gtcatcgcct acgtcaacga gcccgctccc
      421 ttggcccccg atcggatcga ggcggacgac ctgcgcaaat acgaagccgt aggggccgcc
      481 gtcctccgga ctgtggagaa tgccaagaac ctcaacacgc tgcgcctcac cgacgtcagt
      541 gcggtcctgc cccacgtcga cctggaagag gcccgaacga tctggggcta catcgactgg
      601 gtccgcgacg cgcccctgga gccgacgccg gaatggcaca atgacgaact gatccggcag
      661 gcgatggacc tccccaagga agaatggaac ctcgtcgacc tcgcgaaaga gctccacctc
      721 gggcccttcg aagcgaagaa gctcgaggta tccctgaaga tcttcgaggg cggcggctac
      781 aagatctcga cgcgcatcgc gccggagctc aagcgaaaga aaccgaaacc ggaggcggtg
      841 ccagaaaccg cgggcgaaga cgaccacgag gcaccggtgg cgaagaagcc gcccacaccg
      901 aaggcagtcg ggaaagttgc ggacgatgct ccccccgcga agtgcgctcc gcaccatgca
      961 cccggagtcg agcgccacgc gtgtggagcc tggctgtgca agggct
//
LOCUS       DATLMA010000222         1199 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_865806, whole genome shotgun sequence.
ACCESSION   DATLMA010000222 DATLMA010000000
VERSION     DATLMA010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865806"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VNA10_02725"
     CDS             complement(<1..208)
                     /locus_tag="VNA10_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36622.1"
                     /translation="MAAPEFGRIWGGIGTYLGQLLPGIAPRHEVTILCGQTPSADTGY
                     RTVALANGGGVMANYYRFQRALQRR"
     gene            complement(416..1144)
                     /locus_tag="VNA10_02730"
     CDS             complement(416..1144)
                     /locus_tag="VNA10_02730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36623.1"
                     /translation="MANLRSEADGPKPPNLTAASEPLRRWTPRVYAIVGPDGAGKTTI
                     ARGIVHRLAQRGIKTRIVWMRSPRIVTLGVLGVLRMSRLAKTVRMGDHDDVHVDLRGH
                     PRLLHLYAWSVTFDYFLGYFGKVTLSKWILRRTVLSDRFAWDTLVDLGLASGVDEGFL
                     DLPPGRILLDLAKKHRTVLVTASGEELIRRKPILSLDPRLARRLRLYAWLADRFGFGQ
                     VDSGTTSEAESVSQVSEYLGIGPE"
BASE COUNT          223 a          386 c          368 g          222 t
ORIGIN      
        1 atcgtcgttg gagcgcccgc tggaaccggt agtagttcgc catgacgccg ccgccgtttg
       61 cgagtgccac cgtgcggtat ccggtgtccg ccgaaggagt ctggccgcag aggatcgtca
      121 cctcgtgtcg aggcgcgatg cccgggagga gttgcccgag gtacgtcccg atcccgcccc
      181 agattcgccc gaactccggg gcggccaccg cgatcttcgt ttccgaatcc ctcccattcc
      241 cgattttcca tcaactgcga ggagcttagg acctcgcgtc ccggacatcg cggaacccga
      301 acctagtgtc cggcgcgcct caatgagccg cgtcgccctc ctctgctgga agatatttat
      361 cgggcctcta tttgagtgtt cagtaacaca gccatcggat tttggtcgga gccggtcact
      421 cgggaccgat gccgaggtat tccgaaactt gggaaacact ctccgcctcc gaggtcgtcc
      481 cgctgtcgac ttgaccgaat ccgaatcggt ctgcgagcca ggcatagagg cggagccgcc
      541 gcgcgagccg cgggtccagc gaaaggatcg gctttcgtcg gatgagttcc tcgcccgacg
      601 cagtcacgag cacggtccgg tgcttcttcg ccagatccag caagatccgg ccgggtggga
      661 gatcgaggaa cccttcatcg accccggagg cgagcccgag gtccacgagc gtatcccagg
      721 cgaaccgatc cgacaagacg gtgcggcgca ggatccattt tgacagcgtg acttttccga
      781 agtagccaag gaagtaatcg aacgtcacag accacgcgta cagatgcagc aaccggggat
      841 gaccacgcaa gtcgacatgg acgtcatcgt ggtcgcccat ccggacggtc ttcgcaagcc
      901 gggacatacg gaggaccccg aggactccaa gtgtgacgat ccgaggcgac cgcatccaca
      961 cgattcgcgt cttgatcccg cgctgagcca gacggtgtac gatcccccgg gcgatcgtcg
     1021 tcttccccgc tccgtccgga cccacgattg cgtagacgcg gggggtccat cgacgaagcg
     1081 gctcgcttgc ggcggtgaga ttcggcggtt tcgggccatc ggcctcgctc cgaagattcg
     1141 ccatgggaag ttgtcaacgt aatttcggtg gtccttcaaa accgtgccgg agttccgtc
//
LOCUS       DATLMA010000223         3577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_21693, whole genome shotgun sequence.
ACCESSION   DATLMA010000223 DATLMA010000000
VERSION     DATLMA010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3577
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21693"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3058)
                     /locus_tag="VNA10_02735"
     CDS             complement(<1..3058)
                     /locus_tag="VNA10_02735"
                     /inference="COORDINATES: protein motif:HMM:NF019407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HVG36624.1"
                     /translation="MKVVLREDESGISEVIGTILILAMTVVLFSTIIIWVSSIPTPVS
                     QGRLDIASQMNPMYNGAGSEIGVNVTLTHQGGEALYPVPTIIYVTSQRGSNPATTDVQ
                     RLHLFNKLLATPSGIIDGTDIVWNVGERWGYKNFTLRSTDSITITIVDTLKSVVLWSA
                     AMSPPAGSRPPVFVDKWADRVPSTPTIDTPESGLPFYIMAQVADPDGDLNTASVYATL
                     TYYYGQPSCAQPFRMYDDGTSGGHGDQTPNDGIFTLYVTACMSNPSLAMAGSIVLFNA
                     TDLKGHTTSTRMTLNLVQGPPGGGGGGGNGGSGRPPNLRWNGNQGYNIFNATQWDQLG
                     YSAVDTRTFKQNETVVLVIGSLSVENVFGIDTFNLGDPFSGTPQQSVVYGATKAVTQA
                     SVPSTTQAFSFFQFVNGYYVYTYRFQLNAVSVGTNFYTTPPSYPRYYWFAKYPLSVLL
                     SSSTGNKFATTDSINVTSDTGSLRSFPVLQTFKDTQFLQPSATFVSTDIVYVQVSMLT
                     VDLNTSMGSVVFGNVIIQDFAGGSPLWRAPAGGTGANLPVCPIIGASCSGQAIWSVQG
                     KNVYRFAIQLARTNQDPWVAGKQNYALSISGIRDFDETYGTVSAQLVVTAPLYKMDIL
                     AGVQEATSNAWGTKNYAFWFQNFNGFDAWKPLRVDYCSGGISTSGVSGSGSTCPSTVN
                     VVVVYADINGDGTLDAAQSFIGTNSASPNSMFVIYRRGIDASGNIVYLPVYFDNTGST
                     ACTALASGDVTGDGAPEIVCGASNGWIWYYKNDGSWTKVYVDQPNSGQQINRVAVADF
                     NGDGKNDIAVGGSAGYLKWYPNLDGLGRFQNSGISDNWFAVAEQTGSGTVPSGSYLQT
                     YVKDATYEQVQEALVNVPLYSGATVNSGFNTSAANWTNGRISGTGSQTYVSSGGNPAG
                     YAQVVNNFVGNTVVAGYWEQSFTVTGSQPFTAFLSLDWRLISTGASSSTFYAFVDTTS
                     AAPPQNPAAGSYVWTSGSQSSAGGWTSAVNVPITKITVPGTYYLKIS"
     gene            3201..>3577
                     /locus_tag="VNA10_02740"
     CDS             3201..>3577
                     /locus_tag="VNA10_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36625.1"
                     /translation="MELTAAERVLLHLHAFWNVREPGREGTQTGIAEGARLLRSHVPR
                     TLKALEREGFIESKDARLLGRTRKVRIYALTESGVRRARQILGQVDATRVEIEGRATT
                     LGDARRDLGLPPLPALAAVDARGR"
BASE COUNT          683 a         1065 c         1151 g          678 t
ORIGIN      
        1 tcgaaatctt gagatagtag gtgccgggaa ccgtaatctt cgtgatcggg acattcaccg
       61 cggaggtcca gccccctgca ctggactgcg atccggaggt ccatacatat gagccagcgg
      121 ccggattctg cggcggcgcc gccgacgttg tgtccacaaa agcatagaac gtactcgagg
      181 aggcgccggt cgagatgagt cgccagtcaa ggcttaggaa tgccgtgaac ggctgcgaac
      241 cggtgaccgt gaaagattgc tcccaatagc ccgcgacgac cgtgttgccg acgaagttgt
      301 tgacgacttg ggcgtatccg gcaggattgc caccgctcga cacataggtc tggcttccgg
      361 ttccggagat ccgcccgttt gtccagttcg ccgcgctcgt gttgaagccg ctgttcaccg
      421 tggcgcccga gtagagcggg acgttcacaa gcgcttcctg gacttgctcg taggtcgcgt
      481 ccttaacgta cgtctgaagg taactgcctg acgggacggt gcccgagccg gtctgctcgg
      541 ccaccgcgaa ccagttgtca ctaatgccgc tgttctggaa tcggcccagg ccgtcgaggt
      601 tcgggtacca cttgagatac cccgcgctcc cgccgaccgc aatgtcgttc ttgccgtctc
      661 cgttgaagtc ggccacggca acgcggttga tctgttgccc gctgttcggc tggtcgacat
      721 acaccttggt ccaacttccg tcgttcttgt aataccaaat ccaaccgttc gaagcgccac
      781 aaacgatctc tggggcgccg tcgccggtga catcgccgga ggcgagcgcc gtgcacgcgg
      841 tgctgcccgt gttatcgaag tacaccggaa gatagacaat atttcccgaa gcgtcgatgc
      901 cgcgacggta gattacgaac atcgagttcg ggcttgcgga gttcgtgccg atgaaactct
      961 gtgcggcatc gagcgtgccg tccccattga tgtcggcata gaccacgacg acgttgacgg
     1021 tgctcggaca cgtggagccc gagccgctaa cgccggacgt ggagatgccg ccggagcagt
     1081 agtcgacccg aaggggcttc cacgcgtcga atccgttgaa gttctggaac caaaacgcgt
     1141 agttcttcgt tccccaagcg ttgctcgtgg cttcctgaac gcccgcgagg atgtccatct
     1201 tgtagagcgg ggccgtgacg acaagctgcg ccgacacggt cccgtaggtc tcatcgaagt
     1261 cccggatccc cgagatggac agggcatagt tttgtttgcc ggcaacccat ggatcctgat
     1321 tcgtccgcgc cagctgaatc gcgaaccgat acacattttt cccttggacg ctccagatcg
     1381 cttggcccga gcaagatgct ccgataatcg gacagacagg caggttcgcg cccgtaccgc
     1441 ccgcgggcgc acgccacaac ggggagccac ccgcaaaatc ctggatgatg acgttcccga
     1501 agaccacgct gcccatgcta gtgttgaggt caacggtcag catgctcacc tgcacgtaga
     1561 caatgtccgt cgagacgaag gtcgcggacg gttgcaggaa ctgcgtgtcc ttgaacgtct
     1621 gcaggacggg aaacgaccgc aggctcccgg tgtcgctcgt gacattgatg gagtccgtgg
     1681 tcgcgaactt gttaccggtg ctcgaactca acaggaccga caacggatac ttcgcgaacc
     1741 agtagtaccg agggtacgag ggtggcgtcg tgtagaagtt cgtgccgacg gagacggcgt
     1801 tgagctggaa gcgatatgtg tagacatagt aaccgttcac gaattggaag aagctgaagg
     1861 cctgggtcgt ggagggcacg gaggcctgcg tgaccgcttt cgtcgcgccg tacacgacgg
     1921 actgctgtgg agtgccgctg aatgggtccc ctagattgaa ggtgtcgatc ccgaacacgt
     1981 tctccaccga gagactcccg atgacgagca cgaccgtctc gttctgcttg aacgtccgag
     2041 tgtcgaccgc ggaatagccg agctggtccc actgggtcgc gttgaagatg ttgtagcctt
     2101 ggttcccgtt ccaccggagg ttcggcggcc gacccgagcc cccgttgcca cccccgccgc
     2161 cgcctcccgg gggaccctga acgaggttga gggtcattcg ggtggacgtc gtgtggcctt
     2221 tcaagtctgt cgcgttaaag aggacgatcg agcccgccat cgcgagagat ggattggaca
     2281 tacacgcggt cacgtagagg gtgaagatgc cgtcgttcgg cgtctggtcc ccgtggccgc
     2341 cgctcgttcc gtcatcgtac atccggaaag gttgcgcgca ggagggttgt ccgtagtagt
     2401 atgtcagcgt ggcgtagacc gaggcggtgt tcagatcccc gtccgggtcc gcgacctgag
     2461 ccatgatgta gaagggcagt ccagactccg gtgtgtcgat cgtcggcgtc gagggcacgc
     2521 ggtccgccca cttgtcgacg aacaccggcg gacgggaacc cgcgggggga ctcatcgcgg
     2581 ccgaccagag gacgacgctt ttcaaggtgt ctacgatcgt aatcgtaatc gagtcggtcg
     2641 accgaagggt gaagttcttg tacccccacc gctcgccgac gttccacacg atgtccgtgc
     2701 catcgatgat tccgctcggg gtcgcgagga gcttgttgaa gagatgcaat cgctggacgt
     2761 ccgtcgtcgc cgggttcgag ccccgttgcg atgtgacgta gatgatcgtg ggcacggggt
     2821 acagcgcctc gccgccctgg tgcgtgagcg tcacgttcac gccgatctcc gaaccggcgc
     2881 cgttgtacat cggattcatc tgggacgcga tgtcgaggcg gccctgcgag accggcgtgg
     2941 ggatgctgga gacccagatg atgatcgtcg agaacaacac gaccgtcatg gcgaggatca
     3001 ggatcgtgcc gatgacttcg gagattcccg attcatcttc gcgcaagacg actttcatcg
     3061 aggggcctcc cggtgggcag gagagaatta tgtttggagc cgagccgacg atatataaag
     3121 tgttcgcggt agttaccacg gagcgaaagc ctgagaatca caggctgcag tcttaagtaa
     3181 acgcgaccgc atcggaacgc gtggagctca ccgcggcgga acgagtcctc ctgcatctcc
     3241 acgcgttctg gaacgtccgg gaaccgggtc gcgagggaac gcagacgggc atcgcggagg
     3301 gtgcccggct cctccgcagt cacgtcccgc ggacgctgaa agccctcgaa cgcgaaggat
     3361 tcatcgagtc gaaggatgcg cggctcctcg gtcggacccg gaaggtccgc atctacgcgc
     3421 tgaccgagtc cggggtccgg cgcgcccgac aaatcctcgg ccaggtcgac gcgacgcgcg
     3481 tcgaaatcga gggacgggcg acgaccctgg gagacgcgcg gagggacctc ggacttcccc
     3541 cgttgcccgc gctggccgcc gtcgacgcac ggggccg
//
LOCUS       DATLMA010000224         1251 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_265880, whole genome shotgun sequence.
ACCESSION   DATLMA010000224 DATLMA010000000
VERSION     DATLMA010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265880"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..297
                     /gene="rpmG"
                     /locus_tag="VNA10_02745"
     CDS             145..297
                     /gene="rpmG"
                     /locus_tag="VNA10_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018285995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HVG36626.1"
                     /translation="MQENISLACSECKRRNYTSTKNKKTNTEKLERAKYCRFCRKHTV
                     HKEGKV"
     gene            302..378
                     /locus_tag="VNA10_02750"
     tRNA            302..378
                     /locus_tag="VNA10_02750"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:336..338,aa:Trp,seq:cca)
     gene            403..627
                     /gene="secE"
                     /locus_tag="VNA10_02755"
     CDS             403..627
                     /gene="secE"
                     /locus_tag="VNA10_02755"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HVG36627.1"
                     /translation="MKPIREWWPTTRDFFRDVWVEMKKVSWPGRNEVIGTTVVVIVAC
                     FIFGFYLFVVDQGLAWLIERLFVAAGVAPA"
     gene            624..1220
                     /gene="nusG"
                     /locus_tag="VNA10_02760"
     CDS             624..1220
                     /gene="nusG"
                     /locus_tag="VNA10_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011340391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HVG36628.1"
                     /translation="MTTETRTKNWYIVHTYSGFEERVRQNLKQRVEAMGMADAFGDVR
                     IPTETLVEMKGGKRREIQRKFFPGYIIVEMEMSDEAWHLVKNTPKVTGFVGSGKEPTP
                     LTAEEVEQILHRVTSTKEKPKPKHTFEKGEHVRITDGPFTNFTGVVEDINFDRSTLKV
                     MVTIFGRSTPVELDFLQVNRYDAGADEQGGGSGGDKKR"
BASE COUNT          293 a          333 c          407 g          218 t
ORIGIN      
        1 gccatccgcg aaggcggtcg aaccgtcgga gccggcacca ttacggagat tttggagtaa
       61 cgatgcgaac gctttccgcc atgggatgtt gcgtaacggc cgtttactct ctaccggccg
      121 cgtcgagcgg ccgctaagga agtcatgcag gagaacatca gtctggcgtg ctcggagtgc
      181 aagcgtcgca actacacgtc gacgaagaac aagaaaacga acaccgaaaa gctcgagcgg
      241 gcgaagtact gtcgcttctg ccgcaagcac acggtgcaca aggaagggaa agtctgagct
      301 taggggtgta gctctaattg gtagagcggc ggtctccaaa accgtaggtt gggggttcga
      361 atccctccac ccctgccata ggaacgagcg agcggaaaga ggatgaaacc aattcgagag
      421 tggtggccga cgacgcgcga tttcttccgc gacgtctggg tcgagatgaa gaaggtgagc
      481 tggcccggga ggaacgaggt catcggcacg accgtcgtcg tgatcgtggc ctgcttcatt
      541 ttcgggttct acctcttcgt cgtcgaccag ggccttgcct ggttgatcga aagactcttc
      601 gtggccgcgg gggtggcgcc ggcatgacga cagaaaccag gacgaagaac tggtacatcg
      661 ttcacacgta ctccgggttc gaggaacgcg tccggcagaa cctgaagcag cgcgtggagg
      721 cgatggggat ggccgacgcg ttcggcgacg tccgcattcc gaccgagacc ctcgtcgaga
      781 tgaaaggcgg gaagcgtcgg gagatccagc gaaagttctt tcccggctac atcatcgtcg
      841 agatggagat gtccgacgag gcatggcatc tcgtcaagaa cacccccaag gtgacgggct
      901 tcgtcggctc cggcaaggag cccacgccgc tgacggcgga agaagtcgaa cagatcctcc
      961 accgcgtgac atcgaccaag gagaagccga aaccgaagca cacgttcgag aagggggagc
     1021 acgtccggat cacggacggt cctttcacga atttcaccgg agtcgtcgaa gacatcaact
     1081 tcgaccgttc gacactgaag gtcatggtca cgatcttcgg gcggtccacg ccggtcgagc
     1141 tggattttct ccaggtcaac cgatacgacg cgggagcgga cgagcagggt gggggctctg
     1201 ggggcgacaa gaagagatag aaccgaaatg ttgaatgttc aatgttgaat g
//
LOCUS       DATLMA010000225         2859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_384262, whole genome shotgun sequence.
ACCESSION   DATLMA010000225 DATLMA010000000
VERSION     DATLMA010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2859
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384262"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VNA10_02765"
     CDS             complement(<1..199)
                     /locus_tag="VNA10_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36629.1"
                     /translation="MLDLVGTIAKSPGRNVILSSHLLPDVETICQYVVILDGGHQIAA
                     GELSQLLSGATDRLRIDVRGDR"
     gene            complement(200..706)
                     /locus_tag="VNA10_02770"
     CDS             complement(200..706)
                     /locus_tag="VNA10_02770"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36630.1"
                     /translation="MLVETAGLTKVFGDVRAVDDLSVKIPDGAIGLVGPNGAGKTTFL
                     RLLLSLLRPTAGTAKVLGRDIEDGIPVRERIGYMPEHDCLIPDMTGVGLVSYMGRISG
                     LDRDTAMSRSHDVLQFVGVEEERYRKIAEYSTGMKQKVKLAQAMVHDPQLYIFDEPTT
                     GLDPRGRS"
     gene            complement(696..1760)
                     /locus_tag="VNA10_02775"
     CDS             complement(696..1760)
                     /locus_tag="VNA10_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36631.1"
                     /translation="MTVKRSIRGISGIVSILVVFAIVFSLPPADGALRKPTYAAGDKW
                     SYVLSGSLGGFPGFNTSQGTFRLGLIGFAYVNVIGSATVQANNASVSAVRVDSRATGF
                     LNGTFSVPGGGNGQISGSFTSTSTEFWEAQAYLPIESLGTTSYNADVTLGITTPLVFD
                     LRANATTSFASIPPFDLDVGQNASAAFASHVELNSTFTAFFQTRTSHNVTDLSSTWHR
                     DVLSRENVSVEAGTFSAYKLNQTLGSFPGIPSGLSGGGNETAYFSNDVGFYVKRVAYE
                     NGTPAAEMRLRSYSYGAGPPTGISATQILLFIVLPIAVAVLVAVLLWRRRKARIQGRA
                     SPPAPPAAEGQELGGKDRAR"
     gene            2024..2407
                     /locus_tag="VNA10_02780"
     CDS             2024..2407
                     /locus_tag="VNA10_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36632.1"
                     /translation="MALSERPVAGDEGRARPLGLHVPIDQRAGEERAPGSGVPVGTQY
                     HWYILAHQRVRKIDADSYTTLMSGVKYKIAHKRPHWRKWSSEYPDQPSETEKLMHVLE
                     ETLARLRESAPEPSLASGMLMAARP"
     gene            complement(2404..>2859)
                     /locus_tag="VNA10_02785"
     CDS             complement(2404..>2859)
                     /locus_tag="VNA10_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36633.1"
                     /translation="VVDHIFLVDRGGVPMVHLSRGLPTGADPDLIASMFTAIIEFMNQ
                     SFHSMGHGDVRSIELEDYQVVFGRGRHILMFLLYHGWESNRLERRVSREVKALERRHA
                     AVLEHWDGDTDRLIEVRRELERVWRLRERQDVVEVLRTKPAVDAPPVVR"
BASE COUNT          525 a          920 c          931 g          483 t
ORIGIN      
        1 cgcggtcgcc gcggacgtcg atccgcaggc gatccgtcgc gccgctcagg agctgactca
       61 gttctcccgc ggcaatctgg tgaccgccat ccaggatgac gacgtactgg cagatcgtct
      121 cgacgtcggg gaggaggtgg ctcgacagga tcacgttgcg accgggcgac ttcgcgatcg
      181 tcccgacgag atcgagcatc tacgaccgac cccgcgggtc caggccggtc gtgggctcgt
      241 cgaagatata caactgcggg tcgtggacca tcgcctgggc cagcttgacc ttctgcttca
      301 tgcccgtcga atactccgcg atcttgcggt acctctcctc ctcgacgccg acgaactgaa
      361 gcacgtcgtg cgagcggctc atcgcggtgt ctcgatcgag gccgctgatg cgccccatgt
      421 acgagacgag gccgaccccg gtcatgtcgg ggatgaggca gtcgtgctcc ggcatgtacc
      481 cgatccgctc ccgcaccggg atgccgtcct cgatgtccct tccgaggacc tttgccgtgc
      541 cggccgtggg ccgcagcagg ctgagtagca gccgcaggaa cgtcgtcttg cctgcgccgt
      601 tggggccgac gaggccgatg gcgccgtccg ggatcttgac gctcaggtcg tccaccgccc
      661 ggacgtcgcc gaagaccttc gtcagtccgg cggtctcaac gagcacgatc tttccctccg
      721 agttcttggc cttccgcggc gggcggagcg ggcggcgatg cccgtccttg gattcgagct
      781 ttgcggcgtc gccagaggag gaccgccacg agtacggcga ccgcgatggg cagcacgatg
      841 aacagcagaa tctgcgtcgc gctgatcccg gtcggcgggc ccgcgccgta cgagtacgac
      901 cggaggcgca tctcggccgc cggcgtgccg ttctcgtacg ccacgcgttt cacatagaat
      961 ccgacgtcgt tcgagaagta cgccgtttca ttgccgccgc cggagaggcc gctcggaatc
     1021 ccggggaagc tcccgagggt ctgattgagc ttgtacgcgg agaaggtacc cgcctcgacg
     1081 ctgacgttct cccgggagag gacatcgcga tgccacgtgg acgagaggtc cgtcacgttg
     1141 tgcgacgtcc tcgtctggaa gaacgcggtg aaggtggagt tcagctcgac gtgcgaggcg
     1201 aaggccgccg aggcgttctg gcctacatcg aggtcgaatg gcgggatgga tgcgaacgag
     1261 gtcgtcgcat tcgcgcgaag gtcgaagacg agaggcgtcg tgatgcccaa ggtgacgtcc
     1321 gcgttgtacg aggtcgtgcc gagcgattcg atcggaaggt acgcctgcgc ctcccagaat
     1381 tcggtggatg tgctcgtgaa cgagcccgaa atctgaccgt tccccccgcc tggcaccgag
     1441 aacgtcccgt tgaggaatcc ggtcgcacga ctatcgacgc gaacggccga cacggatgcg
     1501 ttgttggcct gcacggtcgc ggacccgatc acgttgacgt acgcgaatcc gatgagcccg
     1561 agacggaagg ttccttggct cgtgttgaaa ccagggaagc cgcccagcga cccactcagg
     1621 acgtagctcc acttatcccc ggccgcgtac gtcggcttcc ggagcgcccc gtccgctggc
     1681 ggcaggctga agacgatcgc gaagaccacg aggatcgaca cgatgccaga aatgccgcga
     1741 atcgaccgtt tcaccgtcac acgccgccgg cacgatacaa ccgagtgata aatcgtttcg
     1801 ccgggaggtc ctcgtttcgt ggagtgccgc gagaggacaa accgccgagc gagtggacga
     1861 tcttcctccg ggagagggag ttgggagata ctttcaccca cctctctccg catcgaagac
     1921 ctttacggcg gcatcgtttc gcgaatctga tcatggccta cgatgacctg aaggagttcg
     1981 aaggcgagac gtacacgggc gtggcggtcg gcggagagca cacgtggctc tatccgaacg
     2041 gcctgtggcg ggagacgaag gtcgcgcccg accgctggga cttcacgttc caatcgatca
     2101 aagagcggga gaggagcgcg cccccggttc gggcgtcccg gtggggacgc agtatcactg
     2161 gtacatcctg gcgcaccaac gcgtgcggaa gatcgacgcg gacagctaca cgaccctcat
     2221 gtcgggcgtg aagtacaaga tcgctcacaa acgaccccac tggcggaaat ggagctcgga
     2281 gtatccggac cagccctcgg agaccgagaa gctcatgcac gtcctcgagg aaacattggc
     2341 ccgcctccgt gaatccgcac ccgagccttc gctcgcgtca ggaatgctga tggccgcacg
     2401 gccctagcgc acgaccggtg gtgcatcaac ggccggcttc gtgcggagga cctcgactac
     2461 atcctgccgt tcccgcaggc gccacacgcg ctcgagctcg cgtcgcacct cgatcaatcg
     2521 gtccgtgtct ccgtcccaat gttcgagcac ggccgcgtgg cgacgctcca gcgccttcac
     2581 ctcccgcgac acccgccgtt ccagacgatt cgattcccaa ccgtggtaga ggaggaacat
     2641 caagatgtgg cggccgcggc cgaacacgac ctggtagtcc tcgagctcga tgctccggac
     2701 gtccccgtgg cccatcgaat ggaacgattg gttcataaac tcgataatcg cggtgaacat
     2761 cgacgcgatg agatccggat ccgcgccggt cgggaggccg cgggagaggt gcaccatcgg
     2821 gacgccccct cggtcgacga ggaagatgtg gtccacgac
//
LOCUS       DATLMA010000226         1309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_442778, whole genome shotgun sequence.
ACCESSION   DATLMA010000226 DATLMA010000000
VERSION     DATLMA010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442778"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(248..934)
                     /locus_tag="VNA10_02790"
     CDS             complement(248..934)
                     /locus_tag="VNA10_02790"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG36634.1"
                     /translation="MLTPDETTTGVWRILSLPAVYETFDALIGTRDVRRRFVEEYIRP
                     VPGAHILDLGCGPGTMLEHLPNIRYTGIDFNESYIVAAQKRYGNRGTFILGDVAEVDW
                     GPDESFDVVVTFGLLHHVSDATAREVIPRVESALKPEGRFVTLDPCFVKNQNIVARYL
                     HKMDRGNHVRDVEGYLRLVNPAFRGITHKVAHDLHVVPSTTLMMTCLPWQSSPVLSRR
                     PAHRELGCEE"
     gene            complement(928..>1309)
                     /locus_tag="VNA10_02795"
     CDS             complement(928..>1309)
                     /locus_tag="VNA10_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36635.1"
                     /translation="LRTLVPRDETIFLFAQPMVPYLAGVNAPIQQLMSPWATLAPAQS
                     DERLISKSGVWGTRELERWLGCDLQYAVISPSLLQTVESLRPEAVRRIRELLEERFIL
                     VGQVGDTPLLTVGVYRRTDDRHTC"
BASE COUNT          280 a          390 c          405 g          234 t
ORIGIN      
        1 acgatgcaca gggccgtgaa cgctcgcccc aatgaacggc gaaccatcgt gagccgtcct
       61 ccagaggggt gacggatgag ccgagattct cgatgggggc ccacggccgc cccctcgtca
      121 gcgccacacg agtcgaaatc actggacaac cggcttggcc gcctccgtgc cgggacggga
      181 cacggagcgg catgcgggac catgtcttcg gaagatggac attggccaca cttttcccga
      241 atcacggtca ctcctcacaa cctagctcac gatgagcggg ccgtcggctc aataccggag
      301 aggactgcca cggcaggcat gtcatcatca aagtggttga gggaacaacg tgtaagtcgt
      361 gagccacctt gtgcgtgatt ccacgaaaag cagggttgac gagacgcaga tagccctcga
      421 cgtcgcgaac atgatttcct cgatccatct tgtgaagata gcgcgccacg atgttctggt
      481 ttttcacgaa acacggatcg agggtcacga atcgcccctc tggcttgagg gcggactcga
      541 cacgagggat cacctctcgt gcggtcgcgt cgctcacatg atgaaggagg ccaaaggtca
      601 ccaccacatc aaacgactcg tccggtcccc aatcgacctc ggcgacatca ccaagaataa
      661 acgtgccgcg gttgccgtag cgcttctgtg cggcaacaat atagctctcg ttgaagtcga
      721 tgccggtgta ccgaatgttc gggagatgtt ctaacatggt ccccgggccg cagccgaggt
      781 cgaggatgtg ggcgcccgga actgggcgaa tgtactcctc gacgaaccgg cgacgcacat
      841 cgcgtgtccc gatgagagca tcaaaggtct cgtacacggc cgggagactc aggatccgcc
      901 atactccagt cgtcgtttca tccggggtca acatgtgtgt cgatcgtccg tgcgacgata
      961 gacgcctacg gtgagcaacg gggtgtcccc gacctgcccg accaggatga agcgctcctc
     1021 gagaagctca cgaatgcggc gcaccgcttc gggccggaga ctctcgacgg tctgaagaag
     1081 ggatggggag atgaccgcat actggaggtc acatccgagc cagcgttcga gttctcgcgt
     1141 cccccacacg ccgcttttcg agatcaatcg ctcgtcactc tgggcaggcg cgagggtcgc
     1201 ccagggcgac atgagttgtt ggatgggagc gttgacgccc gcgaggtagg ggaccatcgg
     1261 ctgtgcaaag aggaagatcg tctcgtcccg cggcaccaag gttcgtagg
//
LOCUS       DATLMA010000227         2332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_809475, whole genome shotgun sequence.
ACCESSION   DATLMA010000227 DATLMA010000000
VERSION     DATLMA010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809475"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VNA10_02800"
     CDS             complement(<1..237)
                     /locus_tag="VNA10_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36636.1"
                     /translation="MKGEVVFYRLFDLGASVDLDEIQGTVDMPFLAGRMLSERATPRY
                     ARFAAPLLVHVDQRTIETNLGSLVASIAVKLYGVG"
     gene            complement(286..1071)
                     /gene="uppS"
                     /locus_tag="VNA10_02805"
     CDS             complement(286..1071)
                     /gene="uppS"
                     /locus_tag="VNA10_02805"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018034969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HVG36637.1"
                     /translation="MPTDISKIISDAAYQAYERRLLHQVRQAAIPHHVAIIMDGNRRF
                     AREIGLGNVLDGHVKGRDKLEEVLEWCLEVGVRILTVFAFSTENLRRPSEEIQHLMHL
                     FAENFRKVGDDDRVHRHKIRINVFGDRELLPAEVIEAIEYAEARTKEYDSYRFNLAVA
                     YGGREEILQAIRDVVRDAQAGKVDPHDIDEKFFSKRLYTADMPDPDLVLRTSGEERIS
                     NFLLWQLAYSELYFVDVYWPGFRKIDFLRALRSYQMRARRYGE"
     gene            1266..2102
                     /locus_tag="VNA10_02810"
     CDS             1266..2102
                     /locus_tag="VNA10_02810"
                     /inference="COORDINATES: protein motif:HMM:NF026161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C15orf41 family protein"
                     /protein_id="HVG36638.1"
                     /translation="MKLSEYQDLYRRLSTAEDIDFLAENFGLDKELLLVIYTQRVVRE
                     TTKKFYRVKAQARRLAFMWQNGESLLGIARKFEFPPILTALMVLEQRKISRKQFWKMI
                     NELDGVKDRRLRRELAEVNRADIVYSPEGSARQYARGRWGEAKLQTWLDARTLQYETE
                     KDLRAKYDKTPDILLHKPIEMNGSRKYWIESKATFGDPYEIRRHLRKQLQPYSDMFGD
                     GAVVYWFGHVDDQKYELPEGVDIVSPTFFETPPLPFPYVPVGEGRLEEPTMESDGFGL
                     RE"
     gene            2147..>2332
                     /locus_tag="VNA10_02815"
     CDS             2147..>2332
                     /locus_tag="VNA10_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015791543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor 1A"
                     /protein_id="HVG36639.1"
                     /translation="MAEQEEVVRVRMPRAKDAEILGIADQLLGASRIRVMCQDGKSRL
                     GRIPGKLKKRMWIREGDL"
BASE COUNT          460 a          702 c          740 g          430 t
ORIGIN      
        1 gccgacgccg tagagcttca ccgcgatgga ggcgaccaac gatccgaggt tcgtctcgat
       61 cgttcgttgg tccacatgga cgaggagggg tgccgcgaac cgggcgtatc gcggcgtggc
      121 ccgttcggaa agcatccgtc cggcgaggaa gggcatgtcg accgtgccct ggatctcgtc
      181 gaggtcgacc gaggctccga ggtcgaagag ccgatagaag acgacctccc ccttcatcgg
      241 cgccgcgcaa gttggcgaag ggacttaagg gctccggtgg acgcctcact cgccgtaccg
      301 ccgcgcccgc atctgatacg accgcaacgc ccgcagaaaa tcgattttgc ggaagccggg
      361 ccagtagacg tccacgaaat acaattcgga ataggcgagt tgccagagga ggaagttcga
      421 gattcgctcc tcgccactgg tgcgcaagac caaatccgga tccggcatgt cggcggtgta
      481 cagacgcttc gagaagaact tctcgtcgat gtcgtgcggg tccaccttcc cggcctgggc
      541 gtcgcgcacg acgtctcgaa tcgcctggag gatttcctcg cggcccccgt aggcgacggc
      601 gaggttgaag cgatagctgt cgtactcctt cgtccgggcc tccgcgtact cgatcgcttc
      661 gatgacctcc gcgggcagga gttcgcggtc cccgaacacg ttgatccgga tcttgtgccg
      721 gtggacacgg tcgtcgtcgc cgacctttcg gaaattctcg gcgaagaggt gcatcagatg
      781 ctggatctcc tcgctcggtc gccgcagatt ctcggtggag aacgcgaaca cggtgaggat
      841 gcggacgccg acctcgagac accattcgag gacttcctcg agtttgtccc ggcccttcac
      901 gtggccgtcg aggacgttcc cgaggccgat ctcccgcgcg aaccggcggt tcccatccat
      961 gatgatggcc acgtgatggg ggatggcggc ctgtcggacc tggtggagga gccgacgttc
     1021 gtacgcctgg tatgcggcgt cactaatgat cttcgaaatg tccgtcggca tcgacggatt
     1081 ctcacgagtg ggcccgacct atttatccat tcgcggcccc gttcaccggg agcgtccgcg
     1141 gtccggtccg gcgctccggt catcgtgcga tcggttcggc ggacccaccc gcaaaccttt
     1201 aagtatcgtc ctcaaattgg tgcaaccagt tcttcatccg acagcgtggt ttagtggcct
     1261 tatcgatgaa attgagtgag tatcaggacc tttaccgaag gctctcgacc gcggaggaca
     1321 ttgattttct ggccgaaaac ttcggactcg acaaggagct cctcctggtc atctacacac
     1381 agcgcgtcgt gcgcgagacg acgaaaaagt tctaccgggt gaaggcgcaa gctcgccgcc
     1441 tcgcgttcat gtggcagaac ggggagagcc tcttggggat tgcccgcaag ttcgagttcc
     1501 cgccgatctt gaccgccctg atggtcctcg agcaacggaa gatttcgcgg aaacagttct
     1561 ggaaaatgat caacgaactg gacggcgtga aggaccgccg cttgcgccgc gagctcgcgg
     1621 aggtaaaccg cgccgacatc gtgtattcgc cggagggcag cgcccgccag tatgcccgcg
     1681 gacggtgggg cgaggcgaag ctccagacat ggctcgacgc acgcaccctg cagtacgaga
     1741 cggagaaaga cctgcgcgcg aaatacgaca agacgcccga tatcttgctc cacaagccga
     1801 tcgaaatgaa cggctcgcgg aagtattgga ttgagtccaa ggcgacattt ggtgacccgt
     1861 acgaaatccg acgccacctg aggaaacagc ttcagccgta cagcgacatg ttcggcgatg
     1921 gcgccgtcgt gtactggttc ggccacgtcg atgaccagaa gtacgagctg ccggagggcg
     1981 tcgacatcgt gagcccgacg ttcttcgaga cgccgcccct cccgtttccg tacgtgcctg
     2041 tgggcgaagg gcgactcgag gaacccacca tggaatcaga cggcttcggc cttcgagaat
     2101 gacggagccg gaaatgttta agtcctccct caccttggtc acgagagtgg ctgaacaaga
     2161 agaggttgtc cgcgtccgca tgccccgggc gaaagacgcg gagatcctcg ggatcgcgga
     2221 ccaacttctc ggggcctcgc ggattcgcgt gatgtgccag gacgggaaga gccgcctcgg
     2281 tcgcatcccg gggaagctga agaagcgcat gtggattcgc gagggcgacc tc
//
LOCUS       DATLMA010000228         2425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_266791, whole genome shotgun sequence.
ACCESSION   DATLMA010000228 DATLMA010000000
VERSION     DATLMA010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266791"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VNA10_02820"
     CDS             <1..252
                     /locus_tag="VNA10_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36640.1"
                     /translation="LRVRLLRPVHEVRYSFFWPPGGVNYDKTVTYFLAEPIGGRIDPE
                     PGFDEVRWVSREEAMRLLHWKNDKEVVDRAFQAMRTFRR"
     gene            complement(249..2090)
                     /gene="polX"
                     /locus_tag="VNA10_02825"
     CDS             complement(249..2090)
                     /gene="polX"
                     /locus_tag="VNA10_02825"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HVG36641.1"
                     /translation="MTSACRRPNPHVPVQITLRMKAPRNYKDGREASPPDVKNEEIAA
                     RFSEIADMLDIRGGEDTFRVLSYQRAARQLESLTENVEDLVRAGRVDQIPGIGPALAE
                     KITEYVTTGRIAYHEELRAKFPPGVLDLLKVRGLGPKKVKILWQQLGITDLDTLKTAA
                     EKHLLRRVKGFGEKTEENLVRAIELVKEGQARAFLVDAARIVDAITEGMKASKTVERI
                     EAAGSFRRMRETVGDVDILAVAKDRAAAAAAFERLPGVVEVLASGETKVVIRLAYHDY
                     EGSPRTIQVDLRILDPDSWGAGLQYFTGSKDHNIRLRTMAERRGVKMNEYGAFRDEKR
                     IAGDTEESMYSCLDLAWIPPEMREDQGEIDLAATGRLPKLVELSDIRGDFHVHTDATD
                     GTEPLEAMVEAARRRGYSFVGISDHSVSATVAGGMTADQALARRDRVRELNRDSKGFT
                     VLLGTECDILDGGEMDYPDEVLKELDFVIASVHSRFTLPRETQTARIVAAAENPHVDI
                     LGHPTTRQIGWRGPIELDLDAVFKASARAGTAIELDADPRRMDLNSPQGRAAKNAGCT
                     LSVDTDAHASGNLAWMRFGVGTARRAWLTPTDVLNTWPLEKMREFLR"
     gene            2089..>2425
                     /locus_tag="VNA10_02830"
     CDS             2089..>2425
                     /locus_tag="VNA10_02830"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HVG36642.1"
                     /translation="MQQLDAVEIQETFYRPIAVERALKWRRLAPPDFRFCVKASQFIT
                     HATTSPTFRRSGRVVPDSEKSNYGSFQDTPQVLEGWEATRSIAEAVRATAIVFQTPAS
                     FGPTDANRNA"
BASE COUNT          383 a          820 c          765 g          457 t
ORIGIN      
        1 ctccgcgtgc ggctcctccg gccggtccac gaagttcggt attcgttctt ctggcctccg
       61 ggcggagtga actacgacaa gacggtgacg tactttctgg cggaaccgat cggcggacgg
      121 atcgatccgg agcccgggtt cgatgaggtg cgctgggtgt cccgcgaaga agcgatgcgc
      181 ctcctgcact ggaagaacga caaagaggtc gtcgaccgtg cattccaggc tatgcggacg
      241 ttccgccgct agcgaaggaa ctcacgcatt ttctcgagcg gccaggtatt cagcacgtcc
      301 gtcggagtga gccacgcccg ccgggccgtg ccgactccga accgcatcca agccaagttg
      361 ccgctcgcat gggcgtcggt gtcaacggag agagtgcaac cggcgttctt cgcggcccgc
      421 ccctgcggcg aattcaggtc catgcgccgc ggatccgcat cgagctcgat cgccgtcccg
      481 gctcgcgcgg atgccttgaa caccgcgtcg agatccaatt caatcggtcc gcgccagccg
      541 atctgccgag tcgtcggatg tccaaggatg tccacatgcg gattctcggc tgccgcgacg
      601 atcctcgcgg tctgcgtctc ccgcggcagc gtgaagcggg agtggacgga cgcgatcacg
      661 aagtcgagtt ccttcaagac ctcgtcggga tagtccatct cgccgccgtc gaggatgtcg
      721 cactcggtcc ccaggaggac cgtgaagcct ttcgaatccc ggttcagctc ccgaacgcga
      781 tcgcgccgcg cgagcgcttg gtccgcggtc attcctcccg cgacggtcgc ggagacggag
      841 tgatcggaga tcccgacaaa cgagtagccg cgacggcggg ccgcctcgac catcgcctcg
      901 agcggctcgg tgccgtcggt cgcatccgta tgcacgtgga agtcgccgcg gatatcggag
      961 agctcgacga gcttcggcag gcgaccggtc gccgcgaggt cgatctcgcc ctggtcctcg
     1021 cgcatctccg gagggatcca cgcgaggtcg aggcacgaat acatgctctc ctccgtgtcc
     1081 cccgcgatcc gcttctcgtc gcggaacgcg ccgtactcgt tcatcttcac gccgcgccgc
     1141 tcggccattg tccgcaagcg gatgttgtga tctttcgaac cggtgaagta ttgcaacccg
     1201 gcgccccagc tgtccggatc gaggatgcgc aggtccacct ggatcgtgcg gggcgagcct
     1261 tcgtaatcgt ggtacgcgag tcggatcacg accttggtct ccccggatgc gaggacttcg
     1321 acgacgccgg gaagacgctc gaaggccgcc gcggcggccg cgcggtcctt cgcgaccgcc
     1381 aggatgtcga cgtcgccgac cgtttcccgc atccgtcgga atgatccggc ggcctcgatc
     1441 cgttcgacgg tcttgctggc cttcatcccc tccgtgatcg cgtccacaat acgagccgcg
     1501 tcgacgagga acgcccgggc ctggccttcc ttgaccagct cgatcgcccg cacgaggttc
     1561 tcttccgtct tctctccgaa ccctttgacg cggcgcagca gatgtttctc ggccgccgtc
     1621 ttgagcgtgt ccagatccgt gatcccgagc tgctgccaca ggatcttgac cttcttcggt
     1681 ccgaggccgc ggaccttgag caggtcgagg acgcccggcg ggaacttcgc ccggagctcc
     1741 tcgtggtacg cgatccgacc ggtggtcacg tactccgtga tcttttcggc caaggcaggc
     1801 ccgatgccgg ggatctgatc gacccgcccc gcccgtacga ggtcctccac gttctccgtg
     1861 agcgattcga gttgtcgcgc ggcccgttgg tacgacagga cgcggaacgt gtcctccccc
     1921 ccgcggatgt cgagcatgtc cgcgatctcg ctgaatcggg cggcgatctc ctcgttcttc
     1981 acgtcgggcg gcgatgcctc gcggccgtct ttatagtttc ttggagcctt catccgcaac
     2041 gtgatttgga ccgggacatg cgggttcggc cgtcggcagg ccgacgtcat gcaacaactt
     2101 gacgccgtcg agattcagga aacgttctac cggcccatcg cggtcgaacg ggctctgaaa
     2161 tggcgccggt tggcaccgcc agatttccgg ttctgcgtga aggcgtcgca gttcatcact
     2221 cacgcgacga cctcacctac cttccgaaga tcgggccgcg tcgtccccga ttcggagaag
     2281 tccaattacg gatcgtttca ggacacacct caggtcctcg agggctggga ggccacccgg
     2341 tcgattgcgg aggccgtccg cgcgaccgcg atcgtgtttc agacgccggc gtcgttcggt
     2401 ccgacggacg cgaaccgcaa cgcgc
//
LOCUS       DATLMA010000229         2316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_323162, whole genome shotgun sequence.
ACCESSION   DATLMA010000229 DATLMA010000000
VERSION     DATLMA010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323162"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VNA10_02835"
     CDS             <1..554
                     /locus_tag="VNA10_02835"
                     /inference="COORDINATES: protein motif:HMM:NF015922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HVG36643.1"
                     /translation="TTDEVVVVKSGGRAVRFPVMHVRDVSRNSIGVKGVKLREGDQVI
                     GMVVASDDRHLLTVSANGYAKRTTMRYDPETSNGFRTRSRAGLGVIAMKVTTKTGPLV
                     DALTVASGDELLASTKKGMAIRCQADSVSEQGRNASGVLLIRLDEGDEVVAVAHLAKE
                     DTTAAASSEASNAPPDEPRPPSS"
     gene            complement(561..1613)
                     /locus_tag="VNA10_02840"
     CDS             complement(561..1613)
                     /locus_tag="VNA10_02840"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HVG36644.1"
                     /translation="MRIDFLEYSAMDLPRKEPFAIAKGTSTVAQNVFVIVHAGSLSGL
                     GSAAPTDVTQETVRSAMDAVKSMARALERFPFERPREVADKMDKVLPGNPSAKAAIDI
                     AVHDLAAQQAGVPLHRYLGSTRDRMVTDMTIGIMDTRSAVERAQRWVQAGFRALKVKI
                     GRDPKSDLDRVRAIRGAVGPGIELRIDGNQGYSWSQALSFARAAKDLNISMFEQPVAV
                     TDLEGMRVLTESSPIPIMADEMVLTADDAKKIRWANAAKAVNLKLMKHGGICRAIDVN
                     TICESAGYPTMVGCMGEPQISIAAALAFALGQKNVRWLDLDSHFNLAEDPSNGLGFEN
                     GELIAPAGPGLGVTLS"
     gene            complement(1650..>2316)
                     /gene="nth"
                     /locus_tag="VNA10_02845"
     CDS             complement(1650..>2316)
                     /gene="nth"
                     /locus_tag="VNA10_02845"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HVG36645.1"
                     /translation="PEGDLHTGETALAKIVVEIRTLNGSSVSAILSQRTRDEMTEIAS
                     RQLFSKYDTPAELAAADAGDVERLIKPVGFYRQKALQIVNVSQTLLDRYEGVVPRTYE
                     ELIELPQVGPKTANCVLVYGFGVPRIPTDTHVHRVSNRLGLVRTKTPEATEQRLMRTV
                     PKEYWLHINELFIRFGKDLCRPIGPRCPQCSFTSFCRFYPKTKWSREARRGRRRTTRR
                     RAG"
BASE COUNT          422 a          717 c          742 g          435 t
ORIGIN      
        1 agaccaccga cgaagtcgtg gtcgtcaaga gcggtggccg tgccgttcga tttcccgtca
       61 tgcacgttcg tgacgtgagt cggaattcca ttggcgtgaa aggcgtcaag ctgcgggaag
      121 gagatcaagt gatcggtatg gtcgtcgcga gcgacgatcg ccatctcctg acggtgagtg
      181 cgaatggcta tgcgaagcgg acaaccatgc gatacgaccc ggaaacgagc aatggattcc
      241 gcacccgttc gcgagccggg ctgggagtga tcgcgatgaa ggtcacgacg aaaacagggc
      301 ctctggtcga tgccttgacg gtagcatcgg gagatgaact gcttgcgtcg acgaagaaag
      361 gaatggcaat ccgatgtcag gctgactcgg tgagcgagca ggggaggaac gcaagtggcg
      421 tgctgctcat ccgtctggat gagggggacg aggtcgttgc cgtcgcccac ctcgccaaag
      481 aggacacgac ggcagcggcg tcgagcgaag ccagtaacgc ccctcccgac gaacctcgtc
      541 ccccaagttc gtagacgctc ctacgatagg gtgacaccga gcccgggccc tgcgggggcg
      601 atcagctcgc cgttctcgaa ccctagcccg ttcgatggat cctcagcgag gttgaagtgc
      661 gaatccaagt cgagccaacg aacgttcttc tggccaaggg cgaaggcgag cgcggcggcg
      721 atcgagatct gcggttcccc catgcaaccg accatcgtgg ggtagccggc ggattcacag
      781 atcgtgttca catcgatcgc gcggcagatg ccgccatgtt tcatcagctt gagattcacg
      841 gccttcgcgg cgttcgccca ccggatcttc ttcgcatcgt ctgccgtgag caccatctca
      901 tcggccatga tcgggatcgg cgaggactcc gtcaagacgc gcatcccctc caggtccgtg
      961 acggccaccg gctgctcgaa catcgaaatg ttcaggtcct tcgcggctcg ggcgaagctg
     1021 agcgcctggc tccagctgta cccttgattc ccgtcaatcc gaagctcgat tcccgggccg
     1081 acggcgcctc gaatggcgcg cacccgatcc aagtccgatt tcggatcgcg gccgatcttc
     1141 accttcaagg cacggaatcc ggcttggacc caccgctggg cccgttcgac tgcgctccga
     1201 gtgtccatga ttccgatcgt catgtccgtg accatccgat cccgggtcga gccgagataa
     1261 cgatgcagtg gtacgcccgc ttgttgggca gcgaggtcgt ggacggcgat gtcgatcgcg
     1321 gctttggcgg atgggttgcc tggcaggacc ttgtccatct tgtcggccac ctcccggggg
     1381 cgctcgaacg ggaatcgttc cagcgcccgt gccatggatt tgaccgcatc catcgcggac
     1441 cggaccgtct cctgagtcac atccgtcggg gcggcacttc cgagtccgga gagcgaaccg
     1501 gcgtgcacga tgacgaagac gttctgtgcg accgttgagg tccctttcgc gatggcgaac
     1561 ggttccttcc gaggaagatc catcgcggag tactcgagga aatcgatccg catcggaatc
     1621 ggacaccgcc acggaacgat atcaaggtgt cagccggctc tgcgtcgtgt ggtccttcgt
     1681 cggccgcgac gcgcttcgcg ggaccacttc gtcttcggat agaaccgaca gaacgaggtg
     1741 aacgagcatt gcgggcaacg cggcccgatc ggtcgacaga gatccttccc gaaccggatg
     1801 aacaattcat tgatgtggag ccagtactcc ttcggcacgg tccgcatcag gcgctgttcg
     1861 gtggcttccg gcgtcttcgt ccgcacgagg ccgagccggt tgctgacccg atggacgtgg
     1921 gtgtccgtcg ggatgcgcgg aacgccgaac ccgtacacga ggacgcagtt cgccgtcttc
     1981 gggccgacct ggggcagctc gatcagttcc tcgtaggtcc gcggcacgac gccttcgtac
     2041 cgatcgagga gggtctggct cacgttcacg atctgcagag ccttctggcg gtagaacccg
     2101 accggcttga tcaggcgttc cacgtcgccc gcgtccgcgg ctgccagttc ggccggggta
     2161 tcgtatttcg agaacagctg cctcgacgcg atctccgtca tctcatcgcg ggtccgctgg
     2221 gacaggatcg cggagacgga ggacccgttc aaggtcctga tctccacgac gatcttcgcc
     2281 agggccgtct cgcccgtgtg gaggtcgccc tcgggc
//
LOCUS       DATLMA010000230         1380 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_266849, whole genome shotgun sequence.
ACCESSION   DATLMA010000230 DATLMA010000000
VERSION     DATLMA010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1380
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266849"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VNA10_02850"
     CDS             complement(<1..317)
                     /locus_tag="VNA10_02850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleic acid-binding protein"
                     /protein_id="HVG36646.1"
                     /translation="MTFLDRTTDARKFRHWEGSVEADYIYTSGVAGERFFVALRDEGK
                     MLASRCTACHLDYLPPRMFCEDCFAELTEYVDVPRTGRVAAITAAHVDRTGAPLSRPQ
                     VWA"
     gene            complement(314..835)
                     /locus_tag="VNA10_02855"
     CDS             complement(314..835)
                     /locus_tag="VNA10_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015589806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HVG36647.1"
                     /translation="MTARISRWPGVELSAADLYGRKVTQTRFRPDAKYAWSAGEAMSR
                     FLAELQNGRLIARSCHRCERILFPPRMFCEECFRPTDEWTFIQDTGTIETFSVSYLDT
                     DAKRIVEPILVGVVSLDGATAKMGMMHFFGEMTKDEIRIGMRVKAEWKPARERQGSVL
                     DIRYFRPLREGER"
     gene            complement(832..>1380)
                     /locus_tag="VNA10_02860"
     CDS             complement(832..>1380)
                     /locus_tag="VNA10_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018031238.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HVG36648.1"
                     /translation="DISPPSDGASAVVLASEDFIRKRRIKDRAWISGVGWCIDSTMWT
                     DRDLVFPEYVARAAKHAYKMAKIDEPRRQIDFAEPYDPFDYKELHHLEGLLLADKGEA
                     PILTREGVTERDGKMPVCPSGGLLGVGNPIAATMGMKIGELFWQLTGQAGKRQIPHEV
                     HTGVSQAWGDLMQYGSVVVMKG"
BASE COUNT          229 a          489 c          417 g          245 t
ORIGIN      
        1 aacgcccata cctgcgggcg cgacagcggc gcaccggtcc ggtccacgtg tgcggcggtg
       61 atcgccgcga cccgacccgt tctcggcacg tcgacgtatt cggtcagctc ggcgaaacag
      121 tcctcgcaga acatccgcgg cgggagatag tcgagatggc atgcggtgca ccgcgaggcc
      181 agcatcttgc cctcgtcgcg cagcgcgaca aagaaccgtt cgcccgcgac ccccgaagtg
      241 tagatgtagt ccgcctcgac gctcccctcc cagtggcgga acttccgcgc gtctgtcgtc
      301 cgatccaaga acgtcatcgc tccccctccc ggagtgggcg gaagtagcgg atgtcgagga
      361 cgctcccctg ccgctcccgg gccggcttcc attcggcctt gacccgcatt ccgatccgga
      421 tctcgtcctt cgtcatctcg ccgaagaaat gcatcatccc catcttggcc gtcgccccat
      481 cgaggctcac gaccccgacg aggatcggtt ccacaatccg cttggcatcc gtgtcgaggt
      541 aggagaccga aaaggtctcg atcgttcccg tgtcctgaat gaaggtccac tcgtccgtgg
      601 gccggaagca ctcctcgcag aacatgcgcg gcgggaagag gatccgctcg catcggtggc
      661 acgatcgcgc gatgagccga ccgttttgga gttccgcgag gaaccgcgac atcgcttcgc
      721 cggcggacca cgcgtacttg gcgtccggac ggaatcgagt ctgtgtcacc ttccgcccgt
      781 acagatcggc cgcgctgagc tcgaccccgg gccaccgcga gatccgcgcg gtcatccctt
      841 catcaccacc acggacccgt actgcatcag gtccccccat gcctgcgata cgccggtgtg
      901 cacctcgtgc gggatctgtc gcttgcccgc ctgaccggtg agctgccaga agagttcgcc
      961 gatcttcatc cccatcgtcg cggcgatcgg attgccgacg ccgaggaggc cgccagacgg
     1021 gcagaccggc atcttcccgt cgcgctcggt gacgccctcc cgcgtcaaga tcggcgcctc
     1081 gcccttgtcc gcgaggagca gtccctcgag gtggtgcagt tccttgtagt cgaacggatc
     1141 gtacggctcg gcgaaatcga tctgtcggcg gggctcgtcg atcttcgcca tcttgtaggc
     1201 gtgcttcgcc gcccgagcga cgtactctgg gaagacgaga tcccgatcgg tccacatcgt
     1261 cgaatcgatg caccatccga ccccggagat ccaggcacgg tccttgatcc gccgcttccg
     1321 gatgaagtcc tccgaagcca ggacgacggc ggacgcgcca tcgctcggcg gactgatgtc
//
LOCUS       DATLMA010000231         2266 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_685102, whole genome shotgun sequence.
ACCESSION   DATLMA010000231 DATLMA010000000
VERSION     DATLMA010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685102"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VNA10_02865"
     CDS             complement(<1..651)
                     /locus_tag="VNA10_02865"
                     /inference="COORDINATES: protein motif:HMM:NF020078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1743 domain-containing protein"
                     /protein_id="HVG36649.1"
                     /translation="MVLWIGVDDTDTLQGMCTTFLLTEIVRDLTQDLDLIRYPRLVRL
                     NPNIPWKTRGNAALCARFGHGQGPPRRVGEIDGRPVLAFPRSRLTPDIDDARQRVASL
                     VERWACFEDRTTNPGFVVLHAPAPPSLYWNAVRKVVTRRQVLRAAAGLGHIAGYKNGR
                     GIIGALASTAWRPQDRTYEILAYRRPSRWGTPREIDPASVVEMDQRFPSTFNNYDYQ"
     gene            735..1175
                     /locus_tag="VNA10_02870"
     CDS             735..1175
                     /locus_tag="VNA10_02870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36650.1"
                     /translation="MVVKTFEFSSVDGRRFVKPTDRWVNLRVDHNSTVTLISELGDRQ
                     ASVDFRFTANYHASEAVVGLIQIEGNLLWEGDARALAKSWSVGGQMPPEVAQEIHTVI
                     MSNCIPEAVILARELRLPPPVPIPQVNVPQQPAKPSKGRSPEIA"
     gene            complement(1176..>2266)
                     /locus_tag="VNA10_02875"
     CDS             complement(1176..>2266)
                     /locus_tag="VNA10_02875"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG36651.1"
                     /translation="RLQADLQAKEDEIKKVKEPLTYKEEELLRREEDLVYREKVIQAE
                     QRKMEEAKAQGGSVEELDMKSRLEELKGQINTKEEEVRTKERYLQQKMEELRLREQGL
                     IAEDIEAREQDLQVEVKQQKVKLGIARLDDLLFGGIPFGTNASVYGPAYVGKEVLVSL
                     FMAEGLKKGVPVLWILTDKGPAEVREEMAFALPGYEEYEKLGLVQYIDTYSKSMGMSA
                     EASDAHTTYIDDPTDHQAILKAVDARAAEWKKKYPTYRMAFRSVSTLIAYLDPTTTFK
                     FLQPFVGRRKRDKAVAFYVIEKGMHEEQEIQMLGSLMDGSIEFKVEQLKSFLCIKGIC
                     DVQSRGWIRYTYTKSSLSIGSFSLDHIK"
BASE COUNT          398 a          749 c          655 g          464 t
ORIGIN      
        1 ctggtaatcg taattgttga aagtcgaggg gaatcgctga tccatctcga cgaccgacgc
       61 gggatcaatc tcccgcggcg ttccccaccg ggaaggacgt cggtaggcga ggatctcata
      121 ggtccggtcc tgaggtctcc acgccgtcga cgcgagcgcg ccgatgattc cccgtccgtt
      181 cttgtaccca gcaatgtgac cgaggcccgc ggcggcccgg agcacctgac gcctcgtcac
      241 gaccttccgg acggcgttcc aatagaggga aggaggcgcg ggggcgtgca acacgacgaa
      301 tccggggttc gtggtgcggt cctcgaaaca agcccaccgt tcaaccagcg aggcgactcg
      361 ttggcgggcg tcgtcgatat ccggggtgag ccgggagcgc ggaaatgcga gtaccggtct
      421 cccgtcaatc tccccgaccc gtcggggcgg cccttgtcca tgaccgaacc gcgcacaaag
      481 cgcggcgttg ccccgggtct tccacggaat gtttggattg agtcgaacca agcggggata
      541 tcggatcaga tcgagatctt gcgtcaggtc gcggacaatc tccgtcaaga gaaacgtcgt
      601 gcacatgccc tggagagtgt ctgtgtcgtc gacgccgatc cagaggacca tcgccgcctc
      661 gaacgctcag cgaggctaaa acccgccgtt cccgcgaacc ttcaaataga ctcggtccgt
      721 tcgaagcgaa gtccatggtc gtcaagacct tcgagttctc cagcgtcgat gggcgccgat
      781 tcgtcaagcc gacggaccgc tgggtgaacc tgcgggtcga ccacaacagc acggtcacct
      841 tgatctccga actgggagac cgccaggcgt ccgtcgactt ccgcttcacc gcgaattacc
      901 atgcgtccga ggcggtcgtc ggccttatcc agatcgaagg gaacctcctc tgggaaggcg
      961 acgcacgcgc gctcgcgaag agttggtcgg tcgggggcca gatgccgcct gaagtcgccc
     1021 aggagattca cacggtcatc atgtcgaact gcattccgga ggccgtcatc ctcgctcgcg
     1081 aactccgact tccaccaccg gtaccgatcc cccaggtcaa tgtcccgcaa caaccggcca
     1141 agccctcgaa gggccgctcg ccggagatcg cctgatcact tgatgtggtc cagagagaac
     1201 gacccgatcg acaagctcga cttcgtgtac gtgtaccgga tccagccgcg actttgcacg
     1261 tcgcagatgc ccttgataca caggaatgac ttcagctgct cgaccttgaa ctcgatgctt
     1321 ccgtccatga gcgaaccgag catctggatc tcctgctcct cgtgcatccc cttctcgatc
     1381 acgtagaagg ccacggcctt gtcccgcttc cgccgaccga cgaatggctg gaggaacttg
     1441 aaggtcgtcg tcgggtccag gtaggcgatg agcgtcgaca cgctgcggaa ggccatacgg
     1501 tacgtcgggt acttcttctt ccactccgcg gcccgagcgt cgacggcctt caggatcgcc
     1561 tgatggtccg tcgggtcgtc gatgtaggtc gtgtgcgcat ccgacgcctc cgcgctcatg
     1621 cccatcgact tcgagtacgt gtcaatgtat tggaccagcc cgagcttctc gtactcctcg
     1681 tatccgggaa gggcgaacgc catctcctcc cggacctcgg ccggcccttt gtccgtgagg
     1741 atccacagga ccgggacccc tttcttgaga ccctcggcca tgaacaagct cacaaggacc
     1801 tccttcccga cgtacgcggg gccgtacacg gaggcgttcg tcccgaatgg gatgccgccg
     1861 aatagcaggt cgtcgagccg ggcgattccc agcttgacct tctgctgctt cacctcaacc
     1921 tggagatcct gttcccgagc ctcgatgtcc tccgcgatga ggccttgctc ccgcagccgg
     1981 agttcttcca tcttctgctg caggtaccgc tctttcgtgc ggacctcttc ttccttcgtg
     2041 ttgatctgtc ccttcagttc ctcgaggcgc gacttcatgt ccaattcctc gacggagccg
     2101 ccctgggcct tcgcctcctc catcttgcgt tgctccgctt ggatgacctt ttcgcggtag
     2161 acgaggtctt cttctcgccg gagcagctct tcctccttgt aggtgagcgg ctccttcacc
     2221 ttcttaatct cgtcctcctt ggcttgcagg tccgcctgga ggcgct
//
LOCUS       DATLMA010000232         1025 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_504800, whole genome shotgun sequence.
ACCESSION   DATLMA010000232 DATLMA010000000
VERSION     DATLMA010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_504800"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VNA10_02880"
     CDS             complement(<1..778)
                     /locus_tag="VNA10_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012037073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HVG36652.1"
                     /translation="MAKIIGIDLGTTNSEAAYMEGGTPRIIPSAEGSAYGGKMFPSVV
                     AFTKDGILVGEPAKRQAVLNPDRTVMQIKRKMGTDYKVRIEGKDYTPQEISAMILRKI
                     KTDAEAFLGQPINQAVITVPAYFNDNQRQATKDAGKIAGLDVLRLVNEPTAAALAYGL
                     DKKGEGKIAVLDLGGGTFDVTLMEMGEGVFEVIATAGDTQLGGMDMDNGIVQWLVAEF
                     RAEHGVDISSDNQAMQRLRDAGEKAKIELTSATETTINLPF"
     gene            complement(771..>1025)
                     /gene="grpE"
                     /locus_tag="VNA10_02885"
     CDS             complement(771..>1025)
                     /gene="grpE"
                     /locus_tag="VNA10_02885"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HVG36653.1"
                     /translation="KTGEGVRMVRDNLVKVLQEIGLQEIPAKGRVFDPYEMDCIEQMP
                     DPEMKDGTVKTVVRKGYRLHDRILRPAQVIVVKNRGETDG"
BASE COUNT          143 a          347 c          302 g          233 t
ORIGIN      
        1 tgaacggcaa gttgatcgtc gtctcggtcg cgctcgtcag ctcgatcttg gccttttcgc
       61 ccgcgtcgcg gagccgctgc atcgcctggt tgtcgctcga gatgtccacg ccgtgctcgg
      121 cgcggaactc ggccacgagc cactggacga tcccgttgtc catgtccatg ccgccgagct
      181 gggtgtcccc tgccgtcgcg atgacctcga agaccccctc gcccatctcc atcagcgtca
      241 cgtcgaaggt gccgccgccg aggtcgagga cggcgatctt gccctcccct ttcttgtcga
      301 ggccgtaggc cagggccgcc gccgtcggct cgttgaccag acggaggacg tcgaggcccg
      361 cgatcttgcc cgcatccttc gtggcctgtc gctggttgtc gttgaagtac gccgggaccg
      421 tgatcacggc ctggttgatc ggctggccaa ggaaggcctc ggcgtccgtc ttgatcttcc
      481 ggagaatcat cgcagagatc tcctgcggcg tgtaatcctt cccctcgatc cggaccttgt
      541 agtccgtccc catcttccgc ttgatttgca tcacggtccg atcggggttc aggaccgctt
      601 ggcgcttcgc cggttcaccg acgaggatcc cgtccttcgt gaaggccacg acggacggga
      661 acatcttccc tccgtacgcg ctgccctcgg cgctcgggat gattcgcggc gttccccctt
      721 ccatgtacgc ggcctcggag ttggtcgtgc cgaggtcgat tccgatgatc ttagccatct
      781 gtttcacctc tgttcttgac gacgatgact tgagcgggac gcaagatgcg atcgtggaga
      841 cggtagccct tccgcacgac cgttttcacg gtgccgtctt tcatctcggg atcgggcatc
      901 tgctcgatgc aatccatctc gtacgggtcg aagacccgtc ccttcgcggg aatctcctgc
      961 aggccgatct cctggaggac tttcaccagg ttgtcacgga ccatccggac gccttccccg
     1021 gtctt
//
LOCUS       DATLMA010000233         2932 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_866867, whole genome shotgun sequence.
ACCESSION   DATLMA010000233 DATLMA010000000
VERSION     DATLMA010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_866867"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..436)
                     /locus_tag="VNA10_02890"
     CDS             complement(164..436)
                     /locus_tag="VNA10_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36654.1"
                     /translation="MIDLALAAGSIAVLLGLLYIYVGNFRGLRSPLSAGLIVFASLFL
                     LENFAAIYFYLAMSNWTGSASYAIPMLVLNGAELVGFATLLYVSWR"
     gene            complement(492..839)
                     /locus_tag="VNA10_02895"
     CDS             complement(492..839)
                     /locus_tag="VNA10_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008513260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HVG36655.1"
                     /translation="MDVPQPRYPQDGWGRRFMDKRLWYLIAGTRGGINRARILWTLHD
                     RPYNANDLATRLALDYKTIRHHLDVLRENDCVMTLGDESYGTLYSLSPRLQVHFEDFL
                     EIWRRIEARLGEK"
     gene            892..1947
                     /locus_tag="VNA10_02900"
     CDS             892..1947
                     /locus_tag="VNA10_02900"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase"
                     /protein_id="HVG36656.1"
                     /translation="MAAIPPRSSWAGKAKGWFLEFRLIPVLLWSYTAVVLGTAVAYFA
                     VGSVNLLWFLVALALGSLIQGWETHAINEIYDWRSGTDQIGGRALSGGSHVRNLGLLG
                     ERDLWWIFALSSVAVAALTVWVVLERVAWLAVLIVAGYVLGLAYTAPPVSTSYRPFAG
                     EWIGGFPGVLLSGLGAYAIQTLSISLVVTTALVAHALVCMAMLVVHHYLDAPMDASAK
                     PQKRTTVVALGFTKAKRYAGIMAAIAAVLYGILGATVHAAFFLGAAFTVPAVWIHFRI
                     EPTDLKSVTRGELRVIQLGVAAGLSTAVGLAPPLWPLLPIAAVGYLAHLAVAAPPAEL
                     ARAWRKVRTADSGSRRP"
     gene            1990..>2932
                     /locus_tag="VNA10_02905"
     CDS             1990..>2932
                     /locus_tag="VNA10_02905"
                     /inference="COORDINATES: protein motif:HMM:NF013663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-NAD kinase family protein"
                     /protein_id="HVG36657.1"
                     /translation="MHQVGFVVNPIAGMGGRVGLKGTDGVANEAQAAGAEPIAGPRAR
                     LFARTFLELSKHDQSLRVRWLTCGGAMGAIPLREAAVGEETIDVVHTPGERTTAADTR
                     RAVDACVERGAELLLFCGGDGTARDVAEAAKDRIPILGIPAGVKMHSGLFAVSPPAAA
                     HLLVGCLRGQLRIGTAEILDLDEEAYRKGEWRVRLFATAKTLVEPNLVAGGKVMIDEV
                     SEEAIRGELAVHFSELFENEPDTLFLLGPGSTLNSIATAIGIDKTLLGVDAVVGGKAV
                     AKDLNEKGILDLLGRHPKAKLVVSPIGAQGFILGRGNL"
BASE COUNT          517 a          934 c          949 g          532 t
ORIGIN      
        1 atcgtcggtg aaggaacccc agcgacccga tgcgagcgtc cagacgccaa agccgacctc
       61 cgacacctcg agttcggact tgcccagcgg ccgatagttc accacgccgt tcctccgcgt
      121 ccgcaaagga ggcggggata tttgaccgca acgcccacgg tcgctagcgc caggaaacgt
      181 aaagcagcgt cgcgaacccg accagctccg cgccgttgag caccaacatc gggatcgcgt
      241 agcttgctga accggtccaa ttgctcatgg ccaggtagaa gtagattgcc gcgaagttct
      301 cgagcaggaa caggctggcg aagacgatga ggccggccga gagcggagaa cggagcccgc
      361 gaaagttacc gacgtaaatg tagaggaggc cgaggagcac cgcgatgctg cccgcggcca
      421 gggccaagtc gatcatccaa aatgtgccga gcgccaaaac gatcaccgta agacgcgggt
      481 ccagtccata tctacttttc ccccagtcgc gcctcaatgc gtcgccagat ctcgaggaag
      541 tcctcgaagt ggacctggag gcgcggcgac agcgaataga gcgtcccgta gctctcgtcc
      601 cccaaggtca tcacgcaatc gttttcgcgc aagacgtcaa ggtgatggcg aatcgtcttg
      661 tagtccagcg cgagtcgggt agccaggtcg ttcgcgttgt acggacggtc gtggagcgtc
      721 cacagaatcc gcgcgcggtt gatgccgccg cgggtccccg cgatgaggta ccacaaccgc
      781 ttgtccatga agcggcgtcc ccaaccgtct tgcgggtatc taggttgcgg gacgtccatc
      841 gaaaacccca tccgcgaacg ttctaatatt actatcccaa tagtcaaatt cttggcggcc
      901 atccctccgc gatccagctg ggcgggcaaa gcgaaaggat ggttcctcga gttccgtctc
      961 atcccggtcc tcttgtggtc gtacaccgcg gtggtcctcg ggaccgcggt ggcgtacttt
     1021 gccgtgggct cggtgaacct cctgtggttt ctcgtcgcct tggcccttgg gtccctgatc
     1081 cagggatggg aaacgcacgc gatcaacgaa atctacgatt ggcggagcgg gaccgatcag
     1141 atcggcggtc gcgcattatc gggcggcagc cacgttcgga acttgggcct cctcggagag
     1201 cgcgaccttt ggtggatctt cgccctgtcg agcgtcgcag tcgccgcgct caccgtgtgg
     1261 gtcgtcctcg agcgggttgc gtggctcgcc gtcctcatcg tcgcggggta cgttctcggg
     1321 ttggcgtaca cggcaccacc ggtgtcgacg tcgtaccgtc cgttcgccgg cgagtggata
     1381 ggcggttttc cgggcgttct cctctctgga ctcggagcct acgcgatcca gacgctctcg
     1441 atttccctcg tggtgacgac ggcgctcgtc gctcacgccc tcgtctgtat ggcgatgctc
     1501 gtggtgcatc actatctcga tgcgccgatg gatgcgagcg cgaagccgca gaagcggacc
     1561 acggtcgtgg ccctcggctt cacgaaggcg aaacgatacg ccggcatcat ggccgcgatc
     1621 gcggcggtgc tttacggcat cctcggcgcg acggtgcacg cggcgttctt cctcggggct
     1681 gcgttcacgg tgcccgcggt gtggatccac ttccgcatcg agcccacgga cctgaaatcg
     1741 gtcacacggg gtgaactccg cgtcatccag ctcggcgtcg cggcaggtct ctcgaccgcg
     1801 gtcggccttg cgccgccgtt gtggcctctc cttccgatcg cggcggtggg ctacctggcg
     1861 caccttgccg tcgccgcgcc ccccgcagag cttgctcgag cctggcgaaa ggttcgcacc
     1921 gccgattcgg gctcgcggcg cccctagccg cgcggaagac ggaaatacgt ccggcccggt
     1981 caagacgcgg tgcatcaggt cggcttcgtc gtgaacccga tcgcggggat gggcggccgc
     2041 gtgggcctta aggggacgga cggagttgcg aacgaagctc aagctgccgg cgcggagccg
     2101 atcgcgggcc cccgagcacg gctcttcgcg cgaacgtttc ttgagctctc gaaacacgac
     2161 cagagcctcc gcgtccgatg gctgacttgc ggtggggcga tgggagcaat tccgcttcga
     2221 gaggccgctg ttggagagga gacgatcgac gtggttcaca cgccagggga acgaacgacc
     2281 gcagctgata cgcgaagagc ggtcgacgcc tgtgtcgagc gaggcgccga gctcctcctg
     2341 ttttgcggcg gcgacggaac ggctcgggac gtcgccgaag ccgccaaaga tcggatcccg
     2401 atcctcggga ttcctgcagg cgtcaagatg cactccggtc tcttcgcggt ttcgcccccg
     2461 gcagcggcgc atctcctggt cggctgcctc cgcggacagc ttcgcatcgg caccgcggaa
     2521 atcctcgacc tcgatgaaga ggcctatcgg aagggtgaat ggcgcgtccg gctgttcgcg
     2581 accgcgaaaa cgctggtcga accgaacctc gtcgcggggg gcaaagtcat gatcgacgaa
     2641 gtgagcgagg aggcgatccg cggagagctc gcggtgcact tctccgaact cttcgagaac
     2701 gaaccggata ccctctttct cctgggtccc ggttctacgt tgaactcgat cgcgaccgcg
     2761 attggaatcg acaagaccct tctcggcgtg gacgcggtcg tcgggggaaa ggccgtcgcg
     2821 aaggatctca acgaaaaagg aatcctcgat ctcttgggtc gtcaccccaa ggcgaagctc
     2881 gtggtgagcc cgattggcgc ccagggtttc atcctcggcc gcggcaacct cc
//
LOCUS       DATLMA010000234         1476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_144058, whole genome shotgun sequence.
ACCESSION   DATLMA010000234 DATLMA010000000
VERSION     DATLMA010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144058"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1226
                     /locus_tag="VNA10_02910"
     CDS             <1..1226
                     /locus_tag="VNA10_02910"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HVG36658.1"
                     /translation="PPPAGPFLMWKTLRGRQLIDRLARPKRFWRVFGDIAIVLVALTM
                     LGTTALLAWEATLVQNAAIRNNPPSPETLLGLPGINPIIPLGYGILGLAVAIILHEFS
                     HGILSRVANIKIRSLGLIFLIFPIGAFVEPDEDELRALPRRERGRLYAVGPATNVLLA
                     VLFATLFSMLILTSVAPVHDGVGIVGFTTTSPAGTAGMQANTVITSINNTPVHTYNEF
                     VAALAAVQPNATVPIQAYDPATRTFSNYSVATQWNPTTKRAMLGIYAFDVSTDYYHPL
                     TNPDKFGGATRAILAYISLPFSGYSPIDEPATHFYQIRGPAALIPAPLFWLFANALYW
                     LFWLNLMLGATNALPAVPLDGGYLFKDGIEGLVSRLRKGIPTEQRDRIVRGVSYTFAF
                     LILGLVLWQLIGPRI"
     gene            complement(1230..>1476)
                     /locus_tag="VNA10_02915"
     CDS             complement(1230..>1476)
                     /locus_tag="VNA10_02915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36659.1"
                     /translation="LEIGRGTFDLNRLLNVGIAALLGIAILVGSLLIYRGKYSSGGII
                     NIILGIVALILSISTTGGILAIVSGVLGLVATEASHP"
BASE COUNT          254 a          500 c          435 g          287 t
ORIGIN      
        1 ctcccccgcc cgcgggtccg ttcctcatgt ggaagaccct tcggggccgc cagttgatcg
       61 accgactcgc gcggccgaaa cggttctggc gggtgttcgg cgacatcgcg atcgtcctgg
      121 tggccctgac gatgctcggc acgacggccc tcctggcctg ggaggcgacg ctcgtccaga
      181 acgcggcgat ccggaacaac ccgccgtccc ccgagacgct gctcggcctg cctggtatca
      241 acccgatcat tcccctcggg tacggcatcc tcggcctggc cgttgccatc atcctccacg
      301 agttctcgca cgggatcctg tctcgcgtcg cgaacattaa gatccgctcc ctcgggctga
      361 tcttcctgat cttcccgatc ggggcgttcg tcgaaccgga cgaggatgag ctccgcgcac
      421 ttccgcgtcg ggaacgcggg cgcctctacg cggtcgggcc ggcgacgaac gtcttgctgg
      481 cggtcctgtt cgccacgctc ttctcgatgc tcatcttgac ctcggtcgcg ccagtccacg
      541 atggagtggg gatcgtcgga ttcacgacga cctctcccgc gggcaccgcg ggaatgcagg
      601 ccaacaccgt gatcacgtcg atcaacaaca cgccggtgca cacgtacaac gagttcgtcg
      661 cggcgctcgc ggcggtccaa ccgaacgcta cggttccgat tcaggcgtac gatcccgcca
      721 cgcgcacctt ctcgaactac agcgtcgcca cgcaatggaa cccgacgacg aagcgggcca
      781 tgctaggaat ctacgcattc gacgtgagta ccgactacta tcatccgctc acgaacccgg
      841 acaagttcgg cggcgcgacg agggcgattc tcgcctacat ctcgttgccc ttctccggct
      901 actcgccaat cgacgagccc gcgacgcact tctatcaaat ccgaggaccc gcagccctaa
      961 ttccggcacc gctcttctgg ctcttcgcga acgcattgta ttggctcttc tggctgaact
     1021 tgatgctcgg tgcaacgaac gccctgcccg cggtcccgct cgatgggggc tatctcttca
     1081 aagacggcat cgaaggcctt gtctcccgct tgcgaaaagg gattcccacg gagcagcggg
     1141 atcgcatcgt gcggggcgtg agctacacgt ttgccttctt gatcctcggg ctcgtcctct
     1201 ggcagttgat tgggccgaga atctgatcct cacggatgac tcgcttcggt cgccacgagt
     1261 ccgaggacgc cgctgacgat tgccaggatg ccgccggtcg tgctgatcga gagaatgagc
     1321 gcgacgattc cgaggatgat attgatgatc ccgcccgagc tgtacttgcc gcggtagatg
     1381 aggaggctcc cgacgaggat tgcaatcccg agaagggcgg cgattcccac attcaacagg
     1441 cggttcaggt cgaaggttcc tcgcccgatc tcgagg
//
LOCUS       DATLMA010000235         1077 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_626011, whole genome shotgun sequence.
ACCESSION   DATLMA010000235 DATLMA010000000
VERSION     DATLMA010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626011"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1077)
                     /locus_tag="VNA10_02920"
     CDS             complement(<1..>1077)
                     /locus_tag="VNA10_02920"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HVG36660.1"
                     /translation="GDIWEGPITRLHKGVDYPRVYPDGRLRSNYNILYRVAARLRDPE
                     TQAVAERLRGFGQSNHEEYWTLIWRDPTLEAAPMSRIPLRHHFEDSGVAYIRTSWDKG
                     AMVLAFKAGPPEGHRALALLPRVPEWNQSDGHAHPDANSFIFYAAGRYLTGDTGYSGM
                     SRARTHNTITVGGIGQGVEGKFDVWAGMPRESLDRIRIVEATGRRIIGEAAAAYPKEA
                     ALERYRREVIFDPKGTLQIRDRIETREPKKVEWYLNADTPFQKTSSGFATDGMEVVIH
                     PPSGATLETRPTLVKVPGRPGSLTEGPTEERGDQVVVTAPPATKFESEMILHVKESRG
                     LAVSGLRGCSAKLEPRDRETPRPRV"
BASE COUNT          178 a          356 c          321 g          222 t
ORIGIN      
        1 acccggggtc tcggggtctc gcggtctcgg ggttccagct tggccgagca acctcgtaac
       61 cccgagaccg cgagacctcg agactccttt acatgaagaa tcatctcgga ttcaaacttg
      121 gtggccggcg gcgcggtgac caccacctga tctccccgct cctccgtcgg cccctcggtc
      181 agcgaaccgg gacgaccggg aactttgacg agcgttggac gcgtctcgag tgtcgccccg
      241 ctgggcgggt gaatgacaac ttccatcccg tccgtcgcaa acccacttga ggttttctgg
      301 aacggagtat ccgcattcag ataccactcg accttcttcg gctcgcgcgt ctcgatccgg
      361 tcgcgaatct gcagcgtgcc tttcggatcg aagatgactt ctcgccggta gcgttcgagt
      421 gcggcctctt tcggatacgc tgcagcggcc tcaccgatga tgcgtctccc cgtcgcctcg
      481 acgatgcgga ttcggtcgag cgactcgcgc ggcatcccag cccacacatc gaattttccc
      541 tcgacgcctt gcccgatgcc gcccaccgtg atcgtgttgt gagtccgcgc ccgtgacatg
      601 cccgagtatc cggtgtctcc ggtcaggtaa cgcccggcgg cataaaagat gaagctgttc
      661 gcatcgggat gggcgtgacc gtcgctctga ttccattccg ggaccctcgg tagcagggcc
      721 agcgcacgat gcccttccgg cggacctgcc ttgaatgcca gcaccatcgc gcctttgtcc
      781 cacgacgttc ggatatacgc cacgccggag tcttcgaaat gatgtcgcag cggaattcga
      841 ctcatcggtg cggcttccag tgtcggatcg cgccagatca gcgtccagta ctcctcgtga
      901 ttgctctgtc cgaatccgcg gaggcgctcc gcaacggcct gcgtttccgg atcgcgcaag
      961 cgagcggcga cgcgatagag gatgttgtag ttgctgcgca gccggccgtc aggatagacg
     1021 cgcgggtagt caacaccttt gtggaggcgc gtgatcggtc cctcccagat gtcgccg
//
LOCUS       DATLMA010000236         1390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_626036, whole genome shotgun sequence.
ACCESSION   DATLMA010000236 DATLMA010000000
VERSION     DATLMA010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626036"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..654
                     /locus_tag="VNA10_02925"
     CDS             <1..654
                     /locus_tag="VNA10_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36661.1"
                     /translation="TYIARFEAGTWKPLPPLMVGVPQHVLTIAPSRPNELWFTLTNTA
                     QPDVLRVYDLDTNKITQIKVSDVHDAYFTPDESEVWSSSSGFLDKPSDRMIIYDPTTK
                     TVKGEIHLPGTYPFHTEKVDQDGVFFMADRSLMVLSDHLGPGLLWVDWKQRRVLSETK
                     LGKQPFHTTYDPEGDRLLTTTNVDGMVNVIDVKTRAVVQKLSVPKAHGIGAVPIAGP"
     gene            721..1203
                     /locus_tag="VNA10_02930"
     CDS             721..1203
                     /locus_tag="VNA10_02930"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HVG36662.1"
                     /translation="MLFRLLAVFYNSLPVRWQRRILNRTQSRFLVGVVGLGVDPRGHV
                     ILARHRFGAPEWRFLGGFLSPRERLEDALAREVREETGIEIEVGPILEANQGYRWQRI
                     ELVYAYRPLGGTERLSEELVEVRAFDPSDLPDVRADQRGIIERRAREAAEWASRQQSS
                     "
     gene            1200..>1390
                     /locus_tag="VNA10_02935"
     CDS             1200..>1390
                     /locus_tag="VNA10_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36663.1"
                     /translation="MRRAGAAVLLVLVVAWLVAPIARAYQLVAGHSSDPLAPRDLVVE
                     EVRFKTGADNALTEAGVELA"
BASE COUNT          239 a          461 c          432 g          258 t
ORIGIN      
        1 acatacatcg cgcgcttcga agccgggacg tggaagccgc tcccgccgct catggttggc
       61 gtgccgcagc acgtgctgac gatcgcaccg agtcggccga acgagctttg gttcaccctc
      121 acgaacacgg cgcagcccga cgtccttcgc gtgtacgacc tcgatacgaa caagatcact
      181 cagatcaagg tcagcgacgt gcacgacgcg tacttcacgc ccgatgagag cgaggtctgg
      241 tcgagctcct caggcttcct cgacaagccc tcggatcgga tgatcatcta cgaccccacg
      301 acgaagaccg tgaagggcga gatccatctt cccgggacct acccgttcca tacggagaag
      361 gtcgaccagg acggcgtctt cttcatggcc gaccgctcgc tcatggtcct ctcggaccat
      421 ctcggccccg ggcttctgtg ggtcgattgg aagcagcgcc gtgtgctctc ggagaccaag
      481 ctcggcaagc aaccctttca cacgacctac gaccctgagg gcgatcgcct actcacgacg
      541 acgaacgtcg atggcatggt gaacgtgatc gacgtgaaga cacgcgccgt cgtgcagaag
      601 ctatctgtac ccaaggcgca cggaatagga gcagtgccga tcgctgggcc ctaacgggcc
      661 caagcgatcg ggtctctaac gctccgcgtt ccgctccata gacacatacc ctttgtaccc
      721 gtgctttttc gactgctcgc ggtcttctac aactcgcttc ccgttcgctg gcagcggcgc
      781 atcctcaatc gcacccagtc gcgtttcctc gtcggcgtcg tcggacttgg cgtcgatccg
      841 cgcggccacg tgatcttggc gcgccatcgt ttcggcgctc cggagtggcg cttcctcggc
      901 ggcttcctct ctccccgtga gcgtctggag gacgcgctcg cccgcgaagt ccgcgaggag
      961 accgggatcg agatcgaagt tggtccgatc ctcgaggcga atcaggggta ccgctggcag
     1021 cgcatcgagc tcgtgtatgc gtaccgaccg ctcggcggca ccgagcggct ttccgaggag
     1081 ctcgtcgagg tcagggcgtt cgatccgtcc gatcttccgg acgtacgcgc tgatcagcgc
     1141 ggcatcatcg agcggcgcgc gcgcgaggcc gcggagtggg catcaagaca gcagagttca
     1201 tgaggcgcgc aggagcggcg gtcctcctcg tcctcgttgt cgcgtggctc gtcgcgccga
     1261 tcgcccgcgc atatcagctc gttgctgggc actcgagcga tccgctggct ccgcgggatc
     1321 tcgtggtcga agaggtccgc ttcaagacgg gtgcggataa cgccttgacc gaggcgggcg
     1381 tagagctcgc
//
LOCUS       DATLMA010000237         1471 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_685755, whole genome shotgun sequence.
ACCESSION   DATLMA010000237 DATLMA010000000
VERSION     DATLMA010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685755"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VNA10_02940"
     CDS             <1..495
                     /locus_tag="VNA10_02940"
                     /inference="COORDINATES: protein motif:HMM:NF013095.4"
                     /note="the function of this ribosomal subunit is unknown;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4e"
                     /protein_id="HVG36664.1"
                     /translation="VTDPKFPVGLMDVLSFAVTKAHYRMLVDTRGRMALVPIDEGDAK
                     WKLCRVEDKTTVRRGKTQVNLHDGRNVLLEKDAYKTGATLKLHVPEQKVVEHYELGKG
                     APVLVTGGQHVGEIAHVLEIQRTRNPRANIVTFTEGFSTDAGKVFVVGKEAPSIRTPE
                     VSAI"
     gene            504..1013
                     /locus_tag="VNA10_02945"
     CDS             504..1013
                     /locus_tag="VNA10_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020448352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HVG36665.1"
                     /translation="MAGMRDIRIEKVVVNVGVGEAGEKLVKAQKVLELVTKQKSVQTL
                     SHQAVRDWGVRRNMPIGTRVTLRGGPAEAFLAEALSIRNNRLPGYSFDSNGNFSFGIQ
                     DYTDFKGMKYDPEIGVFGMDVSVSLQRPGWRVARRSNKARRIPRRHRVSRDEGMQFMK
                     DRFKVEVVT"
     gene            1010..1156
                     /locus_tag="VNA10_02950"
     CDS             1010..1156
                     /locus_tag="VNA10_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HVG36666.1"
                     /translation="MKRTKDFGRKRGCLRCGRKRGIVRRYGLHLCRQCFREIAYELGF
                     RKYS"
     gene            1166..>1471
                     /locus_tag="VNA10_02955"
     CDS             1166..>1471
                     /locus_tag="VNA10_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HVG36667.1"
                     /translation="MLQDALNDAMVTMRNAEAAGKTDCVIRPASKLIGRVLKVMQEHE
                     YIRSFELIEDGRGNLFRVALVGSINSCGVIKPRFAVKRTELEKWEARYLPAQDFGVLI
                     "
BASE COUNT          289 a          431 c          513 g          238 t
ORIGIN      
        1 gtcacggatc cgaaattccc ggtcggcctc atggatgtcc tctcgttcgc ggtgacgaag
       61 gcccattacc ggatgctcgt cgacacgcgc ggccggatgg ccctcgtgcc gatcgacgag
      121 ggtgatgcga agtggaagct ctgccgcgtc gaggacaaga caacggtccg ccggggcaag
      181 acgcaggtga atctccatga cgggcggaac gtcctcctgg agaaggacgc gtacaagacc
      241 ggggccacgc tgaagctcca cgtcccggag cagaaggtcg tcgagcatta cgaactcggg
      301 aaaggcgcgc cggtcctggt gacgggcggc caacacgtcg gcgagattgc gcacgtcctc
      361 gagatccagc ggacccgcaa cccgcgggcg aacatcgtga ccttcacgga aggcttctcg
      421 acggacgccg gcaaggtctt cgtcgtcggc aaggaggccc cgtcgatccg aacgccggag
      481 gtctcggcga tctaggtggg accatggcgg gcatgcgcga catccggatt gagaaagtcg
      541 tcgtcaatgt cggcgtcggc gaggcgggcg agaagctcgt caaagcgcag aaggtcctcg
      601 agctcgtgac gaagcagaag tccgtgcaga ccctgagcca ccaggccgtg cgggactggg
      661 gcgtccgccg gaacatgccg atcgggacgc gcgtcacctt gcggggcggt cccgccgagg
      721 cgttcctcgc ggaagcgctc tcgatccgga acaatcgact cccggggtac agtttcgact
      781 cgaacgggaa cttctcgttc gggattcagg actacaccga tttcaagggg atgaagtacg
      841 acccggagat tggcgtgttc gggatggacg tcagcgtgag tttgcagcgg cccggatggc
      901 gggtcgcgcg acggtcgaac aaggcgcgcc gaatcccgcg gcgacatcgg gtctcccggg
      961 atgaggggat gcaattcatg aaggatcgct tcaaggtcga ggtggtcacc tgaagcggac
     1021 gaaggacttt ggtcggaagc gcggctgcct gcgttgcgga cgcaagcgcg gcatcgtgcg
     1081 ccggtatggg ctccacctgt gccggcaatg cttccgcgag attgcctatg agctcggctt
     1141 ccggaagtac agctgagggg acaccatgct gcaagacgct ctcaacgacg ccatggtgac
     1201 gatgcgaaac gccgaggccg ccggcaagac ggactgcgtg atccgtcccg catcgaagtt
     1261 gatcggccgc gtgctgaagg tgatgcagga gcacgaatac atccggtcgt tcgaactcat
     1321 cgaggacggt cgcgggaatc tgttccgcgt ggcgctggtc ggcagcatca acagttgcgg
     1381 cgtgatcaag ccgaggtttg cggtcaaacg aaccgagctc gagaagtggg aggcccggta
     1441 cctgcccgcc caagacttcg gcgtcctgat c
//
LOCUS       DATLMA010000238         1331 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_749566, whole genome shotgun sequence.
ACCESSION   DATLMA010000238 DATLMA010000000
VERSION     DATLMA010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_749566"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VNA10_02960"
     CDS             complement(<1..195)
                     /locus_tag="VNA10_02960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36668.1"
                     /translation="MDAPIRVIWYTDPHNIWCWGFEPTIRRLEVRYPEMVQIETRQGG
                     LFEDFSPVREQWARMSGGRWK"
     gene            288..878
                     /locus_tag="VNA10_02965"
     CDS             288..878
                     /locus_tag="VNA10_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012619051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HVG36669.1"
                     /translation="MRLDDRQWAGLLLFVGIAQFAVIGLTVAESVYPNYSVSQNFISD
                     LGVGPAALIFDPSIILVGLVVLATAWFLFRAFRDRILSVVVALAGVGAIAVGVFTEDF
                     GVIHPLVSLWTFVFIALSAILAMRVVRPPFQYISVILGVLSLIALGLYISKTYAGLGP
                     GGMERMIVWPILVWGLAFGGYLFAPSPSSAEASAPS"
     gene            891..>1331
                     /locus_tag="VNA10_02970"
     CDS             891..>1331
                     /locus_tag="VNA10_02970"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HVG36670.1"
                     /translation="MDRLDLAAIESARKRIEGLVFRTPLVRLNVDDTPAEIYLKLENL
                     QPTGSFKVRGAGNSIARLTPEQRSHGVFTCSAGNMAQALAWHARRLGIPCTAIVPDTA
                     PATKLAAIRRFGATIVQLSWDEVWEIGITRTYAQLKGWTFVHPFA"
BASE COUNT          196 a          438 c          420 g          277 t
ORIGIN      
        1 cttccagcgg ccgccggaca tccgcgccca ctgctcccgg acggggctga aatcctcgaa
       61 gagtccgcct tggcgcgtct cgatctggac catttccggg tagcgcacct cgaggcggcg
      121 gatcgtcggc tcgaaccccc aacaccagat gttgtgcgga tcggtgtacc agatgactcg
      181 gattggtgcg tccatgcaag acccggcccg cgtaggcggc ggtttgctaa gaagtcctcg
      241 gtccgccggt cggaatcctt atggtcccgg attcgcgtcg ccgacgcatg cgcctcgacg
      301 accgtcagtg ggcgggcttg cttctgttcg tggggatcgc gcagttcgcg gtcatcggcc
      361 tcaccgtcgc ggagtccgtg tatccgaatt acagtgtgtc gcagaacttc atcagcgatc
      421 tcggggtcgg ccccgccgcg ctgatctttg acccatcgat tatcctcgtc ggcctcgtcg
      481 tcctcgcgac cgcgtggttc ctgtttcggg cgttccgaga tcgaatccta tcggttgttg
      541 tggccctcgc gggagttgga gcgattgccg tcggggtttt cacggaagat ttcggcgtga
      601 ttcacccgct cgtctcgctg tggacgttcg tgttcatcgc cctctccgcg atcctcgcga
      661 tgcgcgtcgt gcggccgccg ttccagtata tctccgtcat cctcggcgtc ctctccttaa
      721 tcgctttggg tctgtacatc tcgaagacct acgcgggact cgggcccggc gggatggagc
      781 gaatgatcgt gtggccgatc ctcgtctggg gcctggcctt cggaggatac ctgttcgccc
      841 cgtcgccatc ctccgcggaa gcgtccgccc cgagctaatg gaggattcgg ttggaccgcc
      901 tcgacctcgc ggcgatcgag tccgcacgca aacggatcga aggcctcgtc ttccggacac
      961 cgctcgtccg cttgaatgtc gacgatacgc cggcggagat ctacctgaaa ctggagaacc
     1021 tgcagccgac tgggtcgttc aaggtccggg gcgcaggcaa ttcgatcgcc cgcctgaccc
     1081 cggaacaacg aagtcacggc gtgttcacgt gcagcgcggg caacatggcc caggccctcg
     1141 cgtggcatgc gcggcgtctc ggaatcccgt gcaccgcgat tgtcccggac accgcgcccg
     1201 ccacgaagct cgccgcgatt cggcggttcg gggcgacgat cgttcagctc tcgtgggatg
     1261 aggtctggga gatcggcatc acccggacgt acgcgcagct caaagggtgg acgttcgtcc
     1321 atccgttcgc c
//
LOCUS       DATLMA010000239         1272 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_444485, whole genome shotgun sequence.
ACCESSION   DATLMA010000239 DATLMA010000000
VERSION     DATLMA010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444485"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..449)
                     /locus_tag="VNA10_02975"
     CDS             complement(57..449)
                     /locus_tag="VNA10_02975"
                     /inference="COORDINATES: protein motif:HMM:NF023010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 domain-containing protein"
                     /protein_id="HVG36671.1"
                     /translation="MTLRLNTAPTQNVGAGPHGTRVTFPITGGSFEGDRLRGKVLPGG
                     DDWTVKRSDGVVELDLRITMETDDGALIHMTFEGIRDDGAPGAPYFRTVPRFETAEAK
                     YSFLNRLLAVGTGEIRADGPVHVIEELL"
     gene            complement(589..1038)
                     /locus_tag="VNA10_02980"
     CDS             complement(589..1038)
                     /locus_tag="VNA10_02980"
                     /inference="COORDINATES: protein motif:HMM:NF023010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 domain-containing protein"
                     /protein_id="HVG36672.1"
                     /translation="MNSRLLMTLQVAVVGAQKIGAVPHGTRVTAPIASGHFEGPRLRG
                     KVLPGGGDWTLLRGDGVLELDLRLTLETDDGALIHMTSFGLRHGPPEVIAALARGESV
                     DPSTYYFRTTPRFETGHPKYAFLNRLLAVSSGDRRAEGPIYTIDEIL"
BASE COUNT          214 a          388 c          440 g          230 t
ORIGIN      
        1 ggcgggaccg cataagcgtg ctcgaccgcg gcccggtgcg tctcgacgag cgtccatcag
       61 aggagctctt cgatcacatg aaccggcccg tcggcgcgaa tctccccggt gccaacggcg
      121 agcagccggt tcaagaagga gtatttcgct tcagcagtct cgaagcgcgg caccgtacga
      181 aagtagggag ctcctggcgc cccgtcgtca cggatgccct cgaacgtcat gtggatgagg
      241 gcgccgtcgt cggtctccat cgtgatgcgt aggtcgagct cgacgacgcc gtccgagcgt
      301 ttgaccgtcc aatcatcgcc gcccggcagc accttgccgc gaagcctgtc gccttcgaac
      361 gaaccaccgg tgatcggaaa cgtgacgcgc gtgccgtgag gtccggcgcc gacgttttgc
      421 gtgggtgccg tgttcagacg aagtgtcatc aggggacgcg atcgcatggc agttttcctg
      481 tcggcgggtg gtggagagga agccgcgagg ggcacgtgtg cgcatccagc gagcgtcgcg
      541 accgcggcaa gcttgagaac gtctcttcgt cgagcgtcca tgggggcctc ataggatctc
      601 gtcgatcgtg tagatggggc cctcggcgcg ccgatcgccg ctcgatacgg cgaggaggcg
      661 attcaagaat gcgtacttcg ggtgcccggt ctcgaaccgg ggcgtggtcc ggaagtaata
      721 ggtcgagggg tcgacgctct cgccacgcgc gagtgctgcg atcacttccg gcggcccgtg
      781 acgaagcccg aacgacgtca tgtggatgag ggcgccgtcg tcggtctcga gtgtgaggcg
      841 caggtcgagc tcgaggacgc cgtctccccg gaggagcgtc caatcaccgc caccgggcag
      901 cacctttccg cgcagccgcg ggccctcgaa gtggccgctc gctatcggtg cggtgacgcg
      961 ggtaccgtga ggcactgcgc cgatcttctg tgcgccgact actgcgacct gcaaggtcat
     1021 caacaaacgg gaattcattc gtccatctcc cttcgctctc ttttggttgg atgccttgcg
     1081 ggagaatccg ctcaccgggg cggcagagcc gcgacatctt gcggtcgcgc tcgctgccgc
     1141 cgtctgaccg gtgaagcggg tcgcgcccgt agacgattgt ctgatgcgaa atcgggccgg
     1201 taatcgggcc gatggctgcc aagttaggga cattaaaagc ggaggggggg agattcgaac
     1261 tcccgagggc tt
//
LOCUS       DATLMA010000240         2513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_749898, whole genome shotgun sequence.
ACCESSION   DATLMA010000240 DATLMA010000000
VERSION     DATLMA010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_749898"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..529)
                     /locus_tag="VNA10_02985"
     CDS             complement(<1..529)
                     /locus_tag="VNA10_02985"
                     /inference="COORDINATES: protein motif:HMM:NF019544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase family protein"
                     /protein_id="HVG36673.1"
                     /translation="MILVIGGPPGSGKTTVAERWAATRGAVLVSAGTRFRAMAKERGL
                     NLEAFGRAAERDPSLDRALDKAVLSEIRSHVAKGLDVVVDGRIQAYLLAKEKIPCLKV
                     LIDAPLALRGKRIAGREGTTVEEAKREILARERSEGIRYKSIYGIDLGDTRIFDLLID
                     SRDRTPDEIVTMIAAR"
     gene            complement(539..1279)
                     /locus_tag="VNA10_02990"
     CDS             complement(539..1279)
                     /locus_tag="VNA10_02990"
                     /inference="COORDINATES: protein motif:HMM:NF014061.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EMC3/TMCO1 family protein"
                     /protein_id="HVG36674.1"
                     /translation="MADDSGSADVEEDAETAPTARPPAPFSRPSLTRFLMIFLFLLAL
                     YAIIDPAVGAGFAGYADKVLSPMFGFGGTLPVLTILLAGLLTTTIGSIIRDHYTNWVK
                     MARTSKVMGAWRKEQMEALRKGQQTRLAQLKEAQQGFMKDQMEVQTAPMKSMAWTMFM
                     FIVIFTWLRLFVDVVLQGLGNQWIAVPWSTHVFVNAVYVFPSWVLLYSLLALPFGQIV
                     VRVLKYFRFRRRLQAMGVPLRAGPDETA"
     gene            complement(1335..1703)
                     /locus_tag="VNA10_02995"
     CDS             complement(1335..1703)
                     /locus_tag="VNA10_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015491848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit beta"
                     /protein_id="HVG36675.1"
                     /translation="MKEISPQLQNQIAQYQQLQNQLQVLGSQRVQLEAKLREIEGTLE
                     ELVKIKDDTPVYKSIGMLLVKQDDREALKKELEEHKETLTIRVKSLQKQEKALTQRYE
                     DLANKIQSALGTTPTPQDSG"
     gene            complement(1700..1939)
                     /locus_tag="VNA10_03000"
     CDS             complement(1700..1939)
                     /locus_tag="VNA10_03000"
                     /inference="COORDINATES: protein motif:HMM:NF011470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex subunit Pcc1"
                     /protein_id="HVG36676.1"
                     /translation="MIMPRATIVLSGPEAGVVYKSLRPETGRDVPKARVSMRSERNRL
                     TLTIDADDTGALRAAVNSYLRWADVAARVRREVTS"
     gene            complement(1936..2070)
                     /locus_tag="VNA10_03005"
     CDS             complement(1936..2070)
                     /locus_tag="VNA10_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit P"
                     /protein_id="HVG36677.1"
                     /translation="MYKCAKCLEPIRANINTVGIQCERCGSKMFYKERPNVKKVVKAR
                     "
     gene            complement(2072..2359)
                     /locus_tag="VNA10_03010"
     CDS             complement(2072..2359)
                     /locus_tag="VNA10_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018034750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L37ae"
                     /protein_id="HVG36678.1"
                     /translation="MARRTRKAGSVARFGPRYGVRIRRRVQEIEEGLKGRHTCPRCAA
                     ISVRRKSSGVWACRRCGYVFAGGAYRPIVTTSFKREVTEASAKPETKAEEA"
     gene            complement(2368..2508)
                     /locus_tag="VNA10_03015"
     CDS             complement(2368..2508)
                     /locus_tag="VNA10_03015"
                     /inference="COORDINATES: protein motif:HMM:NF015670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36679.1"
                     /translation="MTTDENGDIRAMQKGLSGSFTYEEVKRIIETAQRVGRDIRPLLQ
                     SS"
BASE COUNT          413 a          830 c          781 g          489 t
ORIGIN      
        1 cccgcgcggc gatcatcgtc acgatctcgt ccggggtccg atcccgggaa tcgataagga
       61 ggtcgaagat ccgcgtgtcc ccgagatcga ttccgtagat cgatttgtat cggatccctt
      121 ccgaccgctc gcgcgccagg atctcgcgtt tcgcctcttc cacggtcgta ccctcccgtc
      181 ccgcgatccg cttcccgcgc agcgccagcg gcgcgtcgat cagcaccttc aggcacggga
      241 tcttctcttt cgcgagcagg tacgcttgga tgcgtccgtc gaccacgacg tcaaggccct
      301 tcgccacgtg cgatcgaatc tcggagagga cggccttgtc caaggcgcga tcgaggctcg
      361 gatcgcgttc cgcggcgcgc ccgaacgctt cgaggttcaa cccgcgctct ttcgccatgg
      421 cccggaatcg cgtgcccgcg gagacgagga cggcaccgcg agtagcggcc catcgttccg
      481 cgaccgtcgt cttgccgctg ccgggcgggc ctccaatcac gaggatcatc gacgtccctc
      541 aggcggtctc atccggtccc gcgcggagcg ggacgcccat cgcctgaagc cggcgtcgga
      601 aacggaagta cttgaggacc cggacgacga tctgcccgaa cgggagcgcg agcagcgaat
      661 agaggaggac ccaagacggg aacacgtaga cggcgttcac gaacacgtgg gtcgaccagg
      721 ggaccgcgat ccactggttc ccgaggccct ggaggacgac atcgacgaag aggcggagcc
      781 atgtgaagat cacgatgaac atgaacatcg tccaggccat cgatttcatc ggcgcggtct
      841 ggacttccat ctggtctttc atgaaacctt gttgggcttc cttgagctgc gcgagccggg
      901 tctgctggcc tttccgcagc gcctccatct gctccttgcg ccaggcgccc atgacctttg
      961 acgtgcgagc catcttcacc cagttcgtgt agtggtctcg gatgatcgag ccgatcgtgg
     1021 tcgtcaagag gccggcgagg aggatcgtga ggaccgggag cgtccccccg aagccgaaca
     1081 tcggggagag gaccttgtcc gcgtatcccg cgaaccccgc ccccacggcc ggatcgatga
     1141 tcgcgtagag ggccagcagg aacaggaaga tcatgaggaa tcgggtcagg ctcggacggc
     1201 tgaacggcgc cggaggccgg gcggtcgggg ccgtttccgc gtcttcctcg acgtccgcgg
     1261 agccggaatc atcggccacg gattcgccaa tggacctgcc gatataagga tttgcaactc
     1321 gcatcaggag agaatcagcc gctgtcttgc ggcgtgggcg tcgtcccgag cgcggactga
     1381 atcttgttcg ccagatcctc gtagcgctgg gtcaaggcct tctcttgctt ctgcagggac
     1441 ttcacccgaa tcgtgagggt ctccttgtgc tcctcgagct ccttcttcaa cgcctcacga
     1501 tcgtcctgtt tgacgagcag catcccgatg cttttgtaca ccggcgtatc gtccttgatc
     1561 ttcacgagct cttccagggt cccttcgatc tcgcgcagtt tcgcttcgag ctggacccgc
     1621 tggctcccga ggacctggag ctggttctgg agctgctggt attgggcgat ctggttctgg
     1681 agctgcggtg aaatctcctt cacgaagtca cctcgcgtcg cacgcgggcc gcgacgtcgg
     1741 cccaccggag gtacgagttc acggcggcac gcaacgcgcc cgtgtcgtcc gcgtcgatcg
     1801 tgagggtcag acggttccgc tccgaacgca tcgagacccg ggcctttggt acgtcgcgtc
     1861 cggtctccgg ccgcaatgac ttgtagacca cgccggcctc gggaccggag aggacgatcg
     1921 tcgcgcgcgg catgatcatc gcgccttgac gaccttcttc acgttcggcc gctctttgta
     1981 gaacatcttc gagccgcagc gctcgcactg aatcccgacc gtgttgatgt tcgcccggat
     2041 cggttccagg cacttcgcgc acttgtacat gtcaggcctc ctccgccttg gtctccggct
     2101 tcgcgctcgc ctcggtgacc tcccgcttga acgacgtggt cacgatcggc cggtaggcgc
     2161 cgcccgcgaa gacgtagccg catcggcggc acgcccagac cccgctcgat ttccgccgaa
     2221 cggagatcgc ggcgcatcgc ggacacgtgt gccgcccttt caggccttcc tcgatctctt
     2281 gcacccggcg gcgaatgcgc acgccatagc gggggccgaa acgggcgacg ctgcctgcct
     2341 ttctcgtgcg acgggccatg gaggacctca ggaagattga aggagcgggc ggatgtcgcg
     2401 gccgacgcgc tgggccgtct cgataatccg cttcacttct tcgtaagtaa agcttccact
     2461 taagcctttt tgcatcgcgc gaatgtcgcc gttctcgtcc gtcgtcacgg tga
//
LOCUS       DATLMA010000241         1018 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_144571, whole genome shotgun sequence.
ACCESSION   DATLMA010000241 DATLMA010000000
VERSION     DATLMA010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144571"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..>1018)
                     /locus_tag="VNA10_03020"
     CDS             complement(210..>1018)
                     /locus_tag="VNA10_03020"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HVG36680.1"
                     /translation="EDDADRRLVGLEKAGLLDRLEWAGAGFWTARKIALDKLPLEVVK
                     ISHVPPEARIEIVTDLTPIVTTAVQNLYTEVAREPGKAYHFPLGLEALRFVGYPDEDL
                     KKLPKTAVESFAGVGYPFATKSIRPGDTVLDVGSGSGTDALYASLFVGPRGRVIGLDF
                     TPAMIVKARANIERMGLKYVTIVEGNATKIPLPDGGVDVVTSNGVLNLVPDKQAAFHE
                     IFRVLRPGGLLQLADIVVQDDVGAVCGLNPQLWADCIGGAAVEADYLRTI"
BASE COUNT          182 a          331 c          299 g          206 t
ORIGIN      
        1 tgcccaccca cacccgcccg aaaggtcggg cacctttccg tcacttcgcg cgttcggtcc
       61 taggcgggcc tttgagtccc gggtttccgg gccgagatca cgacgctttc cgcaccgaag
      121 ctctttgtaa ttcgtttcgt actttccgat ccgctcttgg agaagtagtc aatccggttg
      181 acgatatgga gatcctcgaa cccggcctct cagatggtcc tcagataatc ggcctcgact
      241 gcggcccccc cgatgcaatc ggcccacagc tgcggattga gaccgcacac ggccccgacg
      301 tcgtcctgga cgacgatgtc cgcgagctgg aggagacctc cgggtctcag gacgcggaag
      361 atctcgtgga aggcggcttg cttgtccggg acgaggttga gcacaccgtt gctcgtcacg
      421 acgtccacac cgccgtccgg aagaggaatc ttggtcgcat tcccttccac gattgtgacg
      481 tactttaggc ccatcctctc gatattcgct ctcgccttca caatcatcgc cggcgtgaaa
      541 tccaagccga tcacgcggcc tcggggcccg acaaagagcg acgcgtagag ggcatctgta
      601 cccgatccgg aaccgacatc gagaactgtg tccccgggtc ggatcgactt tgtggcgaac
      661 ggatagccga cgccggcgaa ggattcgact gccgttttcg gaagtttctt caggtcctca
      721 tccgggtacc caacgaaccg gagggcttcg aggcccagcg gaaagtggta tgccttgccg
      781 ggctctcggg cgacctctgt gtacagattc tggaccgccg tcgtgacgat cggcgtgagg
      841 tccgtcacga tttcgatccg cgcctcggga gggacgtggg agatcttcac gacttccaga
      901 ggaagcttgt ccagtgcaat ctttcgggcc gtccagaacc ccgcgcccgc ccattcaagt
      961 cggtccagga ggccggcctt ctccagaccg acgaggcgtc gatccgcgtc gtcctcgc
//
LOCUS       DATLMA010000242         1822 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_387293, whole genome shotgun sequence.
ACCESSION   DATLMA010000242 DATLMA010000000
VERSION     DATLMA010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387293"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..394)
                     /locus_tag="VNA10_03025"
     CDS             complement(41..394)
                     /locus_tag="VNA10_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012244830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HVG36681.1"
                     /translation="MRTIVTTNVFLAISDPTRRAVLDLLATGSRKAGDIAARFRHLTQ
                     PAVSRHLKVLREAGLVNVEVNAQQRIYELKPEGLAELYEWVAKYQAMWPDTLEALERY
                     LDAKAVDQKAKGKKR"
     gene            complement(391..810)
                     /locus_tag="VNA10_03030"
     CDS             complement(391..810)
                     /locus_tag="VNA10_03030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36682.1"
                     /translation="MKKYSRDYIAACRARVEADLRAYRNQVGKSPSKEFEARFFNDQV
                     LLLDYMFVHRLSGIEGKDGNPLNEVRVLCNSILLNRGRLQVDRLPGWPNSAVAGIKLP
                     PEKSVLRLKPSDDVRLSGADFERLSKAFFADLEKKFG"
     gene            complement(824..1261)
                     /locus_tag="VNA10_03035"
     CDS             complement(824..1261)
                     /locus_tag="VNA10_03035"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG36683.1"
                     /translation="MPETEAMIEKLTHVPIVVSDQEKALKFYTEVLGFEKRTDYRNPG
                     SPRWLTVAPKGTDVELILFEGTYKLDPRAPPEAGSGGNHLVFRTNDCRKDFEILKARG
                     LKFKDPAPVEANYGIAAYFTDPDGNHLTLLQPGPVPAQSQRKA"
     gene            1526..>1822
                     /locus_tag="VNA10_03040"
     CDS             1526..>1822
                     /locus_tag="VNA10_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017620955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36684.1"
                     /translation="MREMSARLLRERTGKGVDAWNRRIRRERLDDEGALRAWLTKQGV
                     TGYAQSLLVMERFGYPDFLLATADELIDAQYVDRPNLRPIFDAIIDAASGLGKVT"
BASE COUNT          312 a          533 c          580 g          397 t
ORIGIN      
        1 ccgcgcggga tccttgcctc catttggagg atgccgctcg tcatcgcttc ttccccttcg
       61 ccttttgatc gacggccttc gcgtcgaggt aacgttcgag ggcctcgagg gtgtccggcc
      121 acatcgcttg gtacttcgcg acccactcgt agagttccgc gagtccctcc ggtttcaact
      181 cgtagatcct ctgctgcgca ttgacctcga cattcacgag ccccgcttcg cggaggactt
      241 tgagatggcg ggacacggca ggctgtgtga ggtgccggaa cctggcggcg atatcgcctg
      301 ccttccggct gccggttgca agaaggtcga ggaccgctcg gcgcgtcgga tcggagatcg
      361 cgaggaagac gttcgtcgtc acgatggtcc tcacccgaac ttcttctcga gatcggcgaa
      421 aaaggctttg gagaggcgct cgaagtcggc tccgctcagc cggacgtcgt cactcggttt
      481 gagcctcagt acggacttct ccgggggaag cttgattcca gcgacggcag agttcggcca
      541 ccctgggagt ctgtcgacct gcagcctgcc ccggttgagc aggatcgagt tgcacaggac
      601 gcggacttcg ttcagcggat tgccgtcctt gccctcgatg cctgagagcc ggtgaacgaa
      661 catgtagtcc aggaggagga cttggtcgtt gaagaagcga gcctcaaact ccttggaggg
      721 cgacttgccg acctggtttc ggtatgcacg gaggtcggcc tcgaccctcg cacgacacgc
      781 cgcgatgtag tccctcgaat atttcttcat cccgagcacg ggatcatgcc ttccgttggc
      841 tctgggccgg cacgggccct ggctggagca gcgtgagatg gttgccgtcc gggtctgtga
      901 agtaggccgc gatgccgtag ttcgcttcga cgggagcagg gtccttgaac ttcagaccgc
      961 gcgccttgag gatctcgaag tccttgcggc aatcgttcgt cctgaaaacg aggtgattgc
     1021 ctccgctccc cgcttcgggc ggcgcgcgag gatccagctt gtatgtgcct tcgaagagga
     1081 tcagctcgac gtccgtgccc ttgggcgcga cggtgagcca gcggggactg cccggattcc
     1141 ggtagtccgt gcgcttctcg aacccgagca cctcggtgta gaacttcagg gctttctcct
     1201 ggtcgctcac gacgattggt acgtgcgtca gtttctcgat catggcttcc gtctccggca
     1261 ctgcataaca cacttgttat ttaacactta gatcatttac actcgctcgg cgtcaggtcc
     1321 cgccgggctt cggattctct cggggcagga ccgagttgat tccgcgaaaa cctcaagtcc
     1381 aaacacgcgc ttttctagcg attatctgac cctcggcgac cgcgaaagtt cttttggtga
     1441 ctcctgcgat tcatcacccg gcggcggccg cggggacgga gatttgacgg agatttcgat
     1501 ggcccaaacg agtgcctggc aaaggatgag agagatgtcg gctcgtctcc tgcgggagcg
     1561 cacgggaaag ggagtggatg cttggaatcg gcggatccgg cgggagaggc tggacgatga
     1621 aggggccctc cgggcgtggc tcacgaagca aggcgtgacc ggatatgccc agtcgcttct
     1681 ggtgatggag cggtttgggt acccggactt tctgctcgct accgcggacg aactgattga
     1741 tgcacagtac gtggatcggc cgaacttgcg accgattttc gatgcgatca tcgacgctgc
     1801 ctcgggtctt ggcaaggtca cg
//
LOCUS       DATLMA010000243         1049 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_387426, whole genome shotgun sequence.
ACCESSION   DATLMA010000243 DATLMA010000000
VERSION     DATLMA010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387426"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..434
                     /locus_tag="VNA10_03045"
     CDS             147..434
                     /locus_tag="VNA10_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010886007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L44e"
                     /protein_id="HVG36685.1"
                     /translation="MKMPQRIRGYCPFCNAHRELEVERVKNRPRSELRAGQRRFRRVT
                     AGYGGFPRPKPEGREKPTKKIHLRFRCRECHKAHQRPGIRAKKFELVEVHK"
     gene            431..610
                     /locus_tag="VNA10_03050"
     CDS             431..610
                     /locus_tag="VNA10_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011011331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S27e"
                     /protein_id="HVG36686.1"
                     /translation="MIPKPTSRFLRVKCEDCGNEQIVFDRAASTVLCQVCGATVAKPT
                     GGKAVVRGEILGVLE"
     gene            610..>1049
                     /locus_tag="VNA10_03055"
     CDS             610..>1049
                     /locus_tag="VNA10_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HVG36687.1"
                     /translation="MAEAKTARQAYEWPDEGELVVCTVANVKNFGAFTTLDEYENKEG
                     FIHIAEVSSGWIKYIRDYVREGQKVVCKVLKVDQDKGHIDLSLKAVNEHQRREKIQEW
                     KNEQKAENLLGIVATRIGKAIEACWVEFGYGLLDSFGSLYRAFE"
BASE COUNT          214 a          335 c          344 g          156 t
ORIGIN      
        1 cacgcagacc gcatgagtgc tcgcgtttca ggctcgaaca gaccgatgtt cggcacgcgc
       61 caacgtctct ttgtcgagat gtccgcggcg acccaggaac cctcaaatag cagttctcct
      121 ctgtatcgat gctcggtcgc ccctccatga agatgcccca gcgtatccgc ggttactgtc
      181 cgttctgcaa cgcgcaccgg gagctcgaag tcgagcgggt gaagaaccgc ccgcggtccg
      241 agctccgggc cgggcagcgg cggttccgac gcgtgacggc cgggtacggc ggcttccccc
      301 gcccgaagcc cgagggtcgc gagaaaccga ccaaaaagat ccatctccgc ttccgctgcc
      361 gggaatgcca caaggcccac cagcggcccg gcatccgcgc gaagaagttc gagctcgtgg
      421 aggtgcacaa gtgatcccga aacccacgag ccggttcctc cgggtcaagt gcgaggattg
      481 cggcaacgag cagatcgtct tcgaccgcgc cgcgagcacc gtgctgtgcc aggtctgcgg
      541 cgcgacggtc gcgaagccga cgggcggcaa ggccgtggtc cgaggcgaga tcctgggggt
      601 cctcgagtaa tggccgaggc gaagacggcc cgccaggcgt acgagtggcc cgacgagggc
      661 gaactcgtcg tgtgcaccgt ggcgaacgtg aagaacttcg gggccttcac gaccctggac
      721 gagtacgaga acaaggaggg cttcatccac attgccgagg tcagctcggg ctggatcaag
      781 tacatccgcg actacgtccg cgaaggccag aaggtcgtct gcaaggtcct caaggtcgac
      841 caggacaaag gccacatcga cctctcgctg aaggcggtca acgagcacca gcgccgcgag
      901 aaaatccagg aatggaagaa cgaacagaag gccgagaacc tcctgggaat cgtcgcgacg
      961 cgcatcggca aggccatcga ggcgtgctgg gtagagttcg gctacggcct gctcgactcg
     1021 ttcggctcgc tctaccgcgc gttcgagga
//
LOCUS       DATLMA010000244         1303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_750125, whole genome shotgun sequence.
ACCESSION   DATLMA010000244 DATLMA010000000
VERSION     DATLMA010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_750125"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VNA10_03060"
     CDS             <1..488
                     /locus_tag="VNA10_03060"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HVG36688.1"
                     /translation="QPLIIGFAVAVTMGGYFAGEIGAYLVSLFAMQWYLLFNLIAGVR
                     SIPGDLDEAARAFGLRGRTYWRRLLLPALVPSLATGSITAWGAGWNALIVAEYLQFGR
                     SVYSVTGLGASLFQATVVTGDYVMGYLTVLTMTVVVLTLNKLLWRPIYKRAAVKYRMD
                     V"
     gene            488..1249
                     /locus_tag="VNA10_03065"
     CDS             488..1249
                     /locus_tag="VNA10_03065"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012544632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36689.1"
                     /translation="MGSAQPLLQVKDVSKSYFDNGKESKILDLIRFELAERDFVCLVG
                     PSGCGKSTLLRIIVGLDTPTSGQVLFEGHPIRADNPQVAMVFQSFALFPWLTVAQNVE
                     LGLEALHEDPAKRRAVAKKFIDAVGLTGFENAYPRELSGGMKQRVGIARALTIEPFLL
                     CMDEPFSSLDALTAQNLRDEILQLWSNPDLPPEAVLMVTHSIEEAVYLADRVIVLSSR
                     PGRMVAELEIDLPRPRNRKDPEFYGWVDEIYSLIV"
BASE COUNT          220 a          390 c          418 g          275 t
ORIGIN      
        1 ttcagcccct gattattggc ttcgccgtcg cggtcaccat gggcggctac ttcgccggag
       61 agatcggagc ctaccttgta tcccttttcg cgatgcagtg gtatctcctg ttcaacttga
      121 tcgcgggggt gcggtcgatc ccgggggacc tcgacgaagc agcccgggcg ttcgggttgc
      181 ggggtcgaac ctattggcgt cgacttcttc tgccggcgct ggtcccctcg ctcgccaccg
      241 gcagcattac ggcgtggggc gccggatgga acgcactcat cgtggccgag tatcttcagt
      301 tcggccggtc ggtctattcg gtgaccggcc tcggagcctc cctgtttcaa gcgaccgtcg
      361 tgaccgggga ttatgtcatg ggctacctca cggtcctcac gatgaccgtt gtcgtcctga
      421 cgctaaacaa actcctctgg cgcccgatat acaagcgtgc cgccgtgaag tacaggatgg
      481 atgtgtgatg ggcagcgccc aaccgctgct tcaggtgaag gacgtttcga agtcctactt
      541 cgacaacggc aaggagtcca agattctcga cctgatccga tttgagcttg cggagcgcga
      601 cttcgtctgc ctcgtcggtc cgtcgggctg tgggaagtcg acgctcctga gaatcattgt
      661 cggcctcgat acgcccacct ccggtcaggt cttgttcgaa gggcatccga tccgcgcgga
      721 caatccgcag gtcgcgatgg tgttccagtc ctttgccctg ttcccgtggc tgacggtcgc
      781 gcagaacgtc gagctcgggt tagaggccct gcatgaggac cccgcgaaac gccgcgccgt
      841 cgcaaagaag ttcatcgacg cggttgggtt gacggggttc gaaaacgcgt acccgcggga
      901 actcagcggg gggatgaagc agcgggtcgg aattgcccgg gccctcacga ttgagccctt
      961 cctgttgtgc atggatgagc cgttctcgtc cctcgacgcc ttgacggccc agaacctgcg
     1021 cgacgagatc cttcagttgt ggtcgaatcc tgatttgccg ccggaggccg tgctgatggt
     1081 cacgcactcg atcgaggagg ccgtgtacct cgcggaccgc gtgatcgtgc tctcgagccg
     1141 acccgggcgc atggtcgccg agctcgagat cgacctgccg cgaccgcgaa accggaagga
     1201 cccggagttc tacggctggg tcgatgaaat ctattcgctg atcgtgtgag gggtaggtca
     1261 agtgtcaaat atgggcgacg atgatggacc gaagaccccc gtg
//
LOCUS       DATLMA010000245         2025 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_203588, whole genome shotgun sequence.
ACCESSION   DATLMA010000245 DATLMA010000000
VERSION     DATLMA010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203588"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..580)
                     /locus_tag="VNA10_03070"
     CDS             complement(59..580)
                     /locus_tag="VNA10_03070"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class IV adenylate cyclase"
                     /protein_id="HVG36690.1"
                     /translation="MDSGARNLVELKARYEDLGKARALLSGAERLGTFVQIDVYFSLG
                     ERRLKLRVVEGMKGGQLIYYERQDRSGVKESRVLLASVPDVATVREILLQVLPMKAEV
                     RKTREVYRLQGVQVHLDVVTGLGKFLEFEKVLADESDREQGQKQLEALRRYFQIPDED
                     LMASSYSDLLESG"
     gene            complement(620..1873)
                     /locus_tag="VNA10_03075"
     CDS             complement(620..1873)
                     /locus_tag="VNA10_03075"
                     /inference="COORDINATES: protein motif:HMM:NF016765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36691.1"
                     /translation="MARAEDGIRATLAEVRREIACRVCHGDIKRCRLAICPYLARVRD
                     WFEERRDLQTTNLFGASPPSAFVGSWGYPKVLVGPLVPPVRDEDTSILDASESWLSYE
                     LPEILRFRLTLVRGKAPRRVAEARTPDSILSTVQEAAMASKPIDTEMWFTKKPTLVSP
                     FSSRAPPSGPSAEIAKVDLTANPSVPRRVDDLVSDTDLRAGEAVTDLYEHGISQSQIT
                     RVFSVGLLGTKDRRRLVPTEWSITAIDDILAKSLVREVRSFPWISDFEVASASGLANN
                     VAVLMFPQAFMFEGLEAWNLEARPTPAHDHEFAGGRTTYPGQIAGAYHATRLPVLEHL
                     ASRRRQAGAIVFMEVYDDWVPLGVWRYRELARAALKTKPGRFESLDEAEAELGRRLRL
                     PLENWWRSSVLRAYLRGQRRITAYV"
BASE COUNT          359 a          665 c          661 g          340 t
ORIGIN      
        1 gctcctcgag gccctccgag cgaacgagaa gatccggaag ttcgagatcg agtgacgcct
       61 acccggactc gaggaggtcg ctgtaggacg aggccatcag gtcctcgtcg gggatctgga
      121 agtaacggcg caaggcctcc aattgtttct ggccctgctc ccgatccgat tcgtccgcga
      181 ggaccttctc gaattccagg aatttaccca gtcccgtgac cacgtcgaga tggacctgga
      241 cgccttggag gcggtagacc tcacgtgtct tgcggacttc cgccttcatc gggaggacct
      301 gcaagagaat ctcacggacg gtcgcaacat cggggacgga cgcgaggagg acccggctct
      361 ccttcacgcc gctccggtcc tgccgttcgt agtagatgag ctgccctccc ttcatgccct
      421 cgaccacgcg gagtttgagc ctccgctcgc cgagggagaa gtacacgtcg atttggacga
      481 acgtgccgag gcgctctgca cccgacagga gggcgcgcgc cttgccgagg tcctcatacc
      541 gcgccttcag ctcgacgaga ttcctcgcgc ccgagtccac gcggggcgag aacgcgggat
      601 ggacaagaag attgctggcc taaacgtagg ccgtgatccg gcgctggccg cgaagatacg
      661 cccgcaggac gctcgatcgc caccagttct ccagcggaag gcgcagacgc cgtcccagtt
      721 cggcttccgc ctcgtcgagg ctctcgaacc gcccaggttt cgttttgagg gccgcccgcg
      781 cgagctcgcg atagcgccag acaccgaggg gcacccagtc gtcgtagacc tccatgaaga
      841 cgatggcgcc tgcttgacgg cggcgtgacg ccagatgctc gagcaccggc aggcgggtcg
      901 cgtggtacgc ccccgcaatc tggcccggat aggtcgtccg gcctccggcg aactcatggt
      961 cgtgagctgg cgtcggcctc gcctccaggt tccaggcttc gagcccctcg aacatgaacg
     1021 cctgcgggaa catcaggacg gcgacgttgt tcgcgagtcc gctcgcgctc gccacctcga
     1081 aatcggagat ccatgggaac gatcggacct cccgaacgag gctcttcgcg aggatgtcgt
     1141 cgattgcggt gatcgaccac tcggtcggga cgagccgccg ccggtccttc gtcccgagca
     1201 agcccacgga aaagacgcgc gtgatctggc tctgggagat cccgtgctcg tagagatcgg
     1261 tgaccgcctc acccgctcgc aaatccgtgt cggagacgag gtcgtccact cgccggggca
     1321 cggacggatt cgcggtgagg tcgaccttcg caatctccgc gctcggtccg ctcgggggcg
     1381 cacgactcga gaacgggctc acgagggtcg gtttcttcgt gaaccacatc tcggtgtcga
     1441 tcggctttga ggccatggcg gcctcctgca ccgtcgagag gatcgagtcc ggcgtgcggg
     1501 cttccgcgac ccgacgaggc gccttcccgc ggaccagggt gagtcggaat cgcaagatct
     1561 cgggaagttc gtacgacagc catgattccg aggcgtcgag gatcgatgtg tcctcatctc
     1621 ggaccggcgg gacgagcggt cccacgagga ccttcgggta tccccacgaa ccgacgaacg
     1681 cactcggggg cgatgccccg aacaaattcg tcgtctgcag atcccgccgc tcctcgaacc
     1741 aatcgcggac ccgcgccagg tatggacaga tggcgagccg acaccgtttg atgtccccgt
     1801 ggcagacccg acacgcgatc tcgcggcgga cttccgccag cgtcgcccga attccgtcct
     1861 ccgctcgggc caatccgaaa gaggagggaa tggtcatagt cacgcggacg gggtgggcgc
     1921 cacgggtttc gggggcgccg gcgcggggga cggtttgtcc tcggggatga cctcgtccca
     1981 gcgcgaatag caaagtggac acacgtggat gatgccgccc gaagc
//
LOCUS       DATLMA010000246         2081 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_686368, whole genome shotgun sequence.
ACCESSION   DATLMA010000246 DATLMA010000000
VERSION     DATLMA010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686368"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VNA10_03080"
     CDS             complement(<1..719)
                     /locus_tag="VNA10_03080"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36692.1"
                     /translation="MSVPSAAEVELADWPTLQGMCKSLGLNPKGRSGVVRIRVLDHVR
                     RRGRPEWRAGRDQMAALLTRLGFPNLSEDLWESVIRLDAPAPWVGLGQAQVASGSLSE
                     AARSFDQAVQMGDASALLHRADALGTGGDYDQAIGACDSFLADHPGDLRALGMKADFL
                     ARSGFKEEAARVLLVAADSHPELPLLRAVAGTAFLRAGRPEVALEAFGSRMAADVIGI
                     EGTLNHGSALLLVGRTREAVE"
     gene            complement(716..1624)
                     /locus_tag="VNA10_03085"
     CDS             complement(716..1624)
                     /locus_tag="VNA10_03085"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36693.1"
                     /translation="MPDTTQRFLPSVDRLESALHSARRAFERGDTEAALGQLGAALRL
                     KPEYDAAWFLKGAVLQKAGDREGALDAFMQALRCNGDSKEAWMGLASVLHELGRLKEE
                     AEAYDRLLAFDPRSLDAWIDKGAALHELQDYSAAIKCYEEVLAVRPEYAPAWNNKGAA
                     LLRLGQEAEAARCFEEALHFDPDYVDAMANRTYLYEKQGYHGEAVLWADRALRIREAP
                     GLWYAKGLAHLGLLESTLAIRSFDRTLALDPTLKEAKAALRRATAMRENSDFYRGPYE
                     CFGTHLAGDPGCEECEIRPRCREVTP"
     gene            complement(1630..>2081)
                     /locus_tag="VNA10_03090"
     CDS             complement(1630..>2081)
                     /locus_tag="VNA10_03090"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36694.1"
                     /translation="EAIAQMTGPVTEVSEAPVPITDFSSLAKAFEAIEDEVEPPAPSV
                     PSDFQSFVESIEPEKEDTHVLLQLAELAMEGGDPQMGLLRYEQAIERDLRNADAWTGK
                     GVALQQLERFREALEAYDRALSLKPNHELARKWRETCARHVASEANE"
BASE COUNT          347 a          723 c          654 g          357 t
ORIGIN      
        1 aactcaaccg cctcgcgcgt tcgtccaacg agtagaagcg cggacccgtg attcagcgtt
       61 ccttcgatac caatgacgtc ggctgccatc ctcgatccaa acgcctcgag agccacttcg
      121 ggacgcccgg ctctcagaaa cgcggtcccg gccaccgcgc gcagcaaggg aagttcagga
      181 tgggagtctg cagcgacgag gagaacgcgg gccgcttcct ccttgaagcc cgaccgcgca
      241 aggaaatccg ctttcatgcc gagcgctcgg aggtccccgg gatggtccgc aaggaacgaa
      301 tcgcacgcgc cgatggcctg atcgtaatcc cctcccgtcc cgagcgcatc cgctcgatga
      361 aggagcgcgg acgcatcgcc catctgaacg gcttggtcga acgacctagc cgcttcgctg
      421 agagacccac tggcaacttg cgcctgcccg agaccgaccc atggagcggg tgcatcgagc
      481 cgaatcacgg actcccacaa gtcctcggag agattcggga atccgagtcg tgtgagcagg
      541 gccgccattt ggtcccgccc tgcccgccac tccggccggc cgcgtcggcg gacgtggtcg
      601 aggacccgta tccggacgac cccgcttcgg cctttcgggt tcagcccgag agatttgcac
      661 atcccctgaa gcgtcggcca gtccgcgagc tcgacttccg cagcggaggg aacgctcacg
      721 gagtcacctc gcggcagcgc ggacggatct cgcactcctc gcagccggga tctccggcga
      781 ggtgggtgcc gaaacactcg tacgggccgc ggtagaagtc cgagttctcc cgcatcgccg
      841 ttgcccgtcg gagcgcggcc ttcgcttcct tgagcgtggg atcgagcgcg agcgttcggt
      901 cgaacgatcg gatcgcgagc gtggattcaa ggagcccgag atgagcgagg cctttcgcgt
      961 accagagccc cggcgcctcc cggatccgca aagcgcggtc ggcccagagg accgcctcgc
     1021 cgtgatagcc ctgtttttcg tagaggtacg tccggttcgc catcgcatcg acgtaatccg
     1081 gatcgaagtg caatgcctcc tcgaagcagc gggcggcttc ggcctcctga ccgagtcgga
     1141 gcagggcggc gcccttgttg ttccacgccg gggcgtactc cggccgaacg gcgaggacct
     1201 cctcgtagca cttgattgct gcagagtaat cctgcaattc atggagcgcg gcacccttgt
     1261 cgatccatgc gtcaagcgac cgcgggtcga acgccagcag ccgatcgtac gcttcggcct
     1321 cctccttcaa ccggccgagt tcgtgcaaca cggacgcaag gcccatccag gcttccttcg
     1381 agtccccgtt gcacctcagc gcctgcatga aggcgtcaag ggcaccttcc cgatcgcccg
     1441 ccttctggag gacggcgcct ttgaggaacc acgctgcgtc gtactccggc ttgagcctga
     1501 gggcggcgcc gagctgaccc aaggcggctt ccgtgtctcc tcgctcaaac gcgcgccgcg
     1561 cggaatgcaa cgcggactcg aggcgatcca cgctcggcag gaaccgctgc gtcgtgtcgg
     1621 gcaccggcgt cactcgttcg cctccgacgc aacgtgccgc gcacacgtct cgcgccactt
     1681 ccttgcgagc tcgtggttcg gcttcaggga gagcgcgcga tcgtacgctt cgagcgcctc
     1741 ccgaaaccgt tcgagttgct ggagggcgac gcctttcccg gtccacgcgt ccgcgtttcg
     1801 gagatcgcgc tcaatcgcct gttcgtaccg gaggagcccc atctgcgggt ccccgccctc
     1861 catggcgagt tccgcgagtt gcaggagcac gtgcgtgtcc tctttctcgg gttcgatcga
     1921 ctcgacgaac gactggaagt cggacggcac ggacggcgcc gggggctcga cctcgtcttc
     1981 aatcgcctcg aatgccttcg cgagcgatga gaagtccgtg atgggcaccg gggcctccga
     2041 aacctccgtg accggcccgg tcatctgggc gatcgcctcg c
//
LOCUS       DATLMA010000247         1248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_23340, whole genome shotgun sequence.
ACCESSION   DATLMA010000247 DATLMA010000000
VERSION     DATLMA010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23340"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..>1248
                     /locus_tag="VNA10_03095"
     CDS             17..>1248
                     /locus_tag="VNA10_03095"
                     /inference="COORDINATES: protein motif:HMM:NF026240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36695.1"
                     /translation="MGPGDVVGTVQEAKNVQHRIMVPPNFRGGKVAQIREGTFKVDEV
                     VAQLDNGEQVKMYQTWPVRRARPVKDRLMPTIPLVTGQRVLDFLFPIAKGGTAAIPGG
                     FGTGKCVVGTTPVFLSEGRLVPIEQLFKETGGGRSGAAEETVRLSEPLGVLTFDGERI
                     RSGRATAVYKGRTSLLTEVRLRSGRSVRLTPVHRLLRFDGRGIVETPASELEEGDAVL
                     VPRRLPLAPARIALPLPAQARVADPRARHEIEVRLAMEGKRLGASKAATLLGLTIDSY
                     WNHRLGRTAPTVRLAERLGVAVHAIRAERASRAIRVPLEISPDLAEFLGLQLSEGMIK
                     GGRVVEFYNNNRDLRHRYLSLAKKLFGLEGMERHDPTVSAISFSSRALALLLERWGVP
                     LRLKSRTLALTRSLAGAS"
BASE COUNT          241 a          374 c          395 g          238 t
ORIGIN      
        1 gcaaccgggt caggccgtgg gcccgggcga cgtcgtgggg acggtccagg aagcgaagaa
       61 cgtccagcat cggatcatgg tccccccgaa cttccgcggt gggaaggtcg cacagattcg
      121 cgagggcacg ttcaaagtgg acgaggtcgt cgcgcagctc gacaacgggg aacaggtgaa
      181 gatgtaccag acctggcccg ttcgccgggc ccggccggtg aaggatcggc tcatgcccac
      241 catcccgctc gtcacgggcc agcgggtcct cgatttcctc ttcccgatcg cgaagggcgg
      301 gaccgccgcg atcccgggcg ggttcgggac ggggaagtgt gtcgtgggta caacccctgt
      361 tttcctctca gagggaaggc tggtcccaat cgagcaactg ttcaaggaaa ccggaggagg
      421 tcgaagtggg gctgcggaag aaaccgtccg attgagtgag ccgcttgggg tcctaacgtt
      481 cgatggcgag cgcattcgga gtggccgtgc aaccgcagtc tataagggtc gcaccagcct
      541 gttgactgag gtccgcctta ggagcgggag gtccgtccgc ctaactcccg tccaccgttt
      601 gcttcgattc gatggaagag gcatcgtcga aacacccgct tcagaacttg aggaaggcga
      661 tgctgtcctc gtgcctcgac ggttgcccct cgctcccgct cgcattgcgc tcccgctgcc
      721 agctcaagca cgggtagcgg atcccagggc tcgacatgag attgaagtcc ggttggcgat
      781 ggaaggaaag aggctgggcg catcgaaagc agcgacattg ctcggtctca cgatcgattc
      841 gtattggaac caccgacttg gccgaacagc accgaccgtg cgactcgcag aacgtctcgg
      901 agtcgcggtt catgccattc gtgccgagcg agccagtcgc gcaatccgcg tgcccctaga
      961 aatctcccca gacttggcag agttccttgg tctccaacta agcgagggaa tgatcaaggg
     1021 cggtcgcgtc gtcgagttct acaacaataa tcgggatctc cgtcatcgct acctctccct
     1081 cgcgaagaag ctcttcggac tcgaagggat ggagcggcac gatccaactg tctctgctat
     1141 ttcctttagc tcccgagctc tcgcgcttct cctcgagagg tggggcgttc cgttgcgact
     1201 gaaatcgcga accctcgcat taacacgttc tttggcgggg gcctcaga
//
LOCUS       DATLMA010000248         1065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_505815, whole genome shotgun sequence.
ACCESSION   DATLMA010000248 DATLMA010000000
VERSION     DATLMA010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505815"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VNA10_03100"
     CDS             complement(<1..903)
                     /locus_tag="VNA10_03100"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HVG36696.1"
                     /translation="MPGRFGPSDFAACGRCGSGQVHPKLLVMGPIAGVDSDSRSYVCH
                     ACGHEGLPIFFDTESARAQFEREKKGVWAPEPASSKKGPMSIPILPIQTDPLVDMKLL
                     DLLPGRVAAVTGVRWEAGALTPTAHRVSFQEYWDAIGGPRYNASRIYMLDLAGINRAN
                     PNFDVTRHLGKRCDVWLDSGGREPEEVMDGYMLDVERVVAGSKTLASADSFAALYALS
                     SEVLPCLDWDGHVVWREPRETQVELPDVAKALRGIGFSTICVMDMRRLGSELGPDPAL
                     LSIVEGLDLEVFVGGGLQESDVLRL"
     gene            complement(914..1060)
                     /locus_tag="VNA10_03105"
     CDS             complement(914..1060)
                     /locus_tag="VNA10_03105"
                     /inference="COORDINATES: protein motif:HMM:NF033496.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2080 family transposase-associated protein"
                     /protein_id="HVG36697.1"
                     /translation="MARVRRESKFEVFGQEMVEKVVAKSGSSGRVYLPPDWIGKRVKV
                     IRVE"
BASE COUNT          193 a          387 c          315 g          170 t
ORIGIN      
        1 cagccggagg acgtccgact cctgcaagcc cccgccgacg aagacctcga ggtcgagccc
       61 ctcgacaatg gataggagcg cgggatccgg tccgagttcg gatccgaggc gccgcatatc
      121 catcacgcag atcgtcgaga agccaatccc gcgcaacgcc ttcgcgacat ccgggagctc
      181 gacctgcgtc tccctgggtt ctcgccagac cacgtgaccg tcccaatcga ggcacgggag
      241 gacctcggat gacagcgcgt acagggccgc gaaagagtcc gcggaggcta aggtcttcga
      301 ccctgcgacc acccgctcca cgtcgagcat gtagccgtcc atgacctcct ccggttcacg
      361 gcccccggag tcgagccaca cgtcgcatcg cttccccaga tgccgcgtga cgtcgaagtt
      421 cgggttcgcg cggttgatgc ccgcgaggtc gagcatgtag atgcgggacg cattgtaccg
      481 cggtccaccg atcgcatccc aatattcctg gaacgagacc cggtgtgcgg tcggcgtcag
      541 cgcgccggcc tcccaccgca cgcccgtgac cgccgcgaca cggcccggga ggagatccaa
      601 cagtttcatg tcgaccaacg gatccgtctg gatcgggagg atcggaatcg acatgggacc
      661 tttcttcgag gacgctggct ccggcgccca cacgcccttc ttctcccgct cgaattgggc
      721 gcgcgccgat tccgtgtcga agaagatcgg gaggccctcg tggccacatg cgtggcacac
      781 gtacgaacgg ctgtcgctgt cgacgcccgc gatcgggccc atcaccagga gcttcggatg
      841 gacctgaccg ctcccgcacc gcccgcacgc ggcgaaatcc gacggcccga aacgccccgg
      901 catcggacgc gcctcactcg acgcgaatga ccttcacccg tttgccgatc cagtccggcg
      961 ggaggtacac acggcccgag ctcccgctct tcgcgacgac cttctcgacc atttcctgac
     1021 cgaagacttc gaacttcgat tctctccgga cacgagccat ctccg
//
LOCUS       DATLMA010000249         1619 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_268455, whole genome shotgun sequence.
ACCESSION   DATLMA010000249 DATLMA010000000
VERSION     DATLMA010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268455"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VNA10_03110"
     CDS             complement(<1..200)
                     /locus_tag="VNA10_03110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36698.1"
                     /translation="MAKRVWRPATLDITALVVCLLGFIGLIFVVWRMKTGAGGTPRAL
                     FVFLLGAICAPFYLAFVKTPKLP"
     gene            complement(360..947)
                     /locus_tag="VNA10_03115"
     CDS             complement(360..947)
                     /locus_tag="VNA10_03115"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HVG36699.1"
                     /translation="MNDGVPVLMEGWRTRDYAYASTVGAISMLVWATSRTSGRDLPYG
                     GSSLLIGLGLLAGLKHPVRRQIYDHLRLLPGDHFRSVARSLRLAVGTARYHLNALVQD
                     GLIYKQGMNGRTRYYVSGGEAEMNRLYARHWEYRDVRMRVLLTLKQMDSAQPAAIAKV
                     LGISRQLASYHLRCLEKAGRVRRHGASYRIVTGRR"
     gene            complement(1013..1447)
                     /locus_tag="VNA10_03120"
     CDS             complement(1013..1447)
                     /locus_tag="VNA10_03120"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HVG36700.1"
                     /translation="MGRKSLSALENASLSFLSAIDTDGGLDAVLFLRRTGSVLASWTR
                     DGIRLDVVSVMAATMLASVDTIVEALGGPSSRSISVASGDRQIIATKVGSQAFLFVVA
                     PKSVSQRYVRKAVRELVARLTAASAITLPRVEADSSKVEARR"
BASE COUNT          330 a          534 c          490 g          265 t
ORIGIN      
        1 gggagcttcg gcgttttcac gaacgccaga tagaacgggg cgcagatggc gcccagcagg
       61 aagacgaaga gagctctcgg ggtcccgccg gctcccgtct tcatcctcca gaccacgaag
      121 atgagcccga tgaaccccaa gagacagacg accagggcgg tgatgtccag ggttgccggg
      181 cgccagacgc gcttagccaa caactcgtcg gagcgcacac ctcatcttaa gcgttagcgc
      241 accgagctct cgatcgctcg gtgctggccc gacggtgacc ttgccgacca agattgaaaa
      301 cggtcttcgg gcgtatcgga cacgaaaccc ggaacgaaga agaccttccg tggaccaagt
      361 caccgtcggc cggtgacgat tcgataagaa gcgccatggc gccggacgcg cccagccttc
      421 tcgaggcatc ggagatgata ggacgcaagc tgtcggctga tccccaggac cttggcgatc
      481 gcggcaggct gcgcgctgtc catctgtttc aacgtgagca agacccgcat gcggacgtcg
      541 cggtactccc agtgccgcgc gtacagccgg ttcatttccg cctctccccc ggacacgtag
      601 taccgagtgc ggccgttcat cccttgtttg tagatcagcc cgtcttggac cagggcgttc
      661 agatggtaac gcgccgtgcc gaccgcgagc cgcaacgacc tcgcgacgga tcggaaatgg
      721 tcccccggaa ggaggcgcag gtgatcgtag atctgccgac gaacggggtg cttgagtccg
      781 gccaacaggc cgaggccgat caacagcgag cttcccccgt acggcaggtc gcggccgctc
      841 gtccgggacg tcgcccaaac gagcatgctg atcgccccga cggtgctcgc ataggcgtaa
      901 tcgcgcgtcc tccacccctc catgagaacc ggaaccccgt cattcattca acacgacgta
      961 tttcaattct ctggtgacaa agatggtccg acccgcgccg gcgcatccgc gttcagcgtc
     1021 gcgcttcgac cttcgacgag tcggcttcca cgcgcggcaa agtgattgcc gatgcggccg
     1081 tcaaacgagc gacgagttct cggaccgcct ttcggacgta gcgttggctc acggacttcg
     1141 gcgcgacgac gaagagaaac gcctgcgagc cgaccttcgt cgcgatgatc tgtcgatcgc
     1201 cgctcgcgac cgagatcgag cgagagctgg gcccgccgag cgcctcgacg atcgtgtcga
     1261 cggaggccaa catcgtcgcc gccatcacgc tcacgacatc caaccggatg ccgtcacgcg
     1321 tccaggaggc cagcacggac ccggtccttc ggaggaagag gaccgcgtcg aggccgccat
     1381 ccgtgtcaat cgcggagagg aacgacagcg aggcgttctc tagtgcggac agcgactttc
     1441 gacccacgcc gaccccttcc actcccggag agatggaccc attggtctat cccctcaaaa
     1501 aggtagccat ccttgcgccg aaaacggcag gcgcgaagcg acggacgaga acccgcgcga
     1561 tggctcttcg cgcagtttga ttttcgcgca attcgtcgac attccaacga acgataatg
//
LOCUS       DATLMA010000250         1562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_627143, whole genome shotgun sequence.
ACCESSION   DATLMA010000250 DATLMA010000000
VERSION     DATLMA010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627143"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1562
                     /locus_tag="VNA10_03125"
     CDS             <1..>1562
                     /locus_tag="VNA10_03125"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HVG36701.1"
                     /translation="QKDRFIESFWRRRSIDSQGLRTDYQAVHTHRVEMAKEQFKNLYN
                     DRAKMLIINGPPDAVVAIDCPEVYVPIQIWYYDRLEVLKSKVYLIFYEPYGIGDYKLW
                     LPLDGEGVLQVGGGFGSSSGMRSPTSRRIDTDRCLEARTLRQAIAYSTAVLGSGAAGL
                     AGSGKLFQPPTIETEGVDQILTMTTELATGSVPLGVVKLVRFPEMRANKIGVDLSLLV
                     SKSDLKSRDLGEEKFYNVDVIGEVVKGERLIDNFKYRFDIPTQEIGGEKIPLTVRRYL
                     YPGNYNLVLKVSDGNQSAEGRITDKLTVPEQPDAPPPEVAAARAEGRATVVKARDLGL
                     LPSAISLLPVAKEIATGLQRFETKVADGVKAVEFYLNGSKVMTKTRPPFDADLNLGPL
                     PRRHTVRVVAYGSAGRAIGEDEYIVNEGREIFRVRVMSPEKGAKVSGPTKVVAAVAVP
                     EGKTLQKLEIYSNERRVATLYQPPFEQTVNIQEGKSLGYVRIVGTLEDGTVAEDLRYV
                     NAPAYISEVSVD"
BASE COUNT          291 a          510 c          521 g          240 t
ORIGIN      
        1 ccagaaggac cgcttcatcg agagcttctg gcggcggcgg tcgatcgact cccagggcct
       61 ccgcacggac taccaggccg tccacacgca tcgcgtcgag atggcgaagg agcagttcaa
      121 gaacctctac aacgatcgcg ccaagatgct catcatcaac gggcctcccg acgcggtcgt
      181 cgccatcgac tgccccgagg tctacgtccc catccagatc tggtactacg accggctcga
      241 ggtcctgaag agcaaggtct acctgatctt ctacgagccg tacggcatcg gcgactacaa
      301 gctctggctg ccgctcgacg gcgagggggt tcttcaggtg ggcgggggat tcggcagctc
      361 gtcgggaatg cgctcgccga ccagccgtcg catcgacacc gatcggtgcc tcgaggcgcg
      421 cacgctccgc caggcgatcg cgtactcgac cgccgtgctc ggttccggcg cggcgggtct
      481 ggccggatcg ggcaagctct tccagccgcc gacgatcgaa acggaaggcg tcgaccagat
      541 cctgacgatg acgaccgagc tcgcgaccgg gtcggtgccg ctcggcgtgg tgaagctcgt
      601 acggttcccg gagatgcgcg cgaacaagat cggcgtcgat ctctcgctgc tcgtctcgaa
      661 gagtgacctg aagtcgcggg acctgggcga ggaaaagttc tacaacgtcg acgtcatcgg
      721 cgaagtggtc aagggcgagc ggctgatcga caacttcaag tatcggttcg acatcccgac
      781 ccaggagatc ggcggcgaaa agatcccgct gaccgtgcgg cgttacctct atccgggcaa
      841 ctacaacctg gtcctgaagg tctccgacgg gaaccagagc gcggaagggc ggatcaccga
      901 caagctgacg gtgccggagc agccggacgc cccgccgccc gaggtcgccg cggcgcgcgc
      961 cgaaggccgc gcgacggtcg tgaaggcgcg ggacctgggg cttctgccgt ccgcgatctc
     1021 gctcctcccg gtcgcaaagg agatcgcgac cggactccag cgcttcgaga cgaaggtcgc
     1081 cgacggggtc aaggcggtcg agttctatct gaacggctcg aaggtcatga ccaagacccg
     1141 cccgccgttc gacgcggacc tgaacctcgg gccgctcccc cgccgtcaca cggtccgggt
     1201 ggtcgcctac gggtcggcgg ggcgcgcgat cggcgaggac gagtacatcg tcaacgaggg
     1261 tcgcgagatc ttccgcgtgc gggtcatgtc tcccgaaaag ggtgccaagg tctccgggcc
     1321 gacgaaagtc gtggctgcgg tcgccgtccc ggaaggcaag actctccaga agctcgagat
     1381 ctactcgaac gaacgccgcg tcgcgactct ctaccagccg cccttcgagc agacggtcaa
     1441 catccaggag ggcaagtcgc tcggctacgt gcggatcgtg ggaacgctgg aagacgggac
     1501 cgtcgcggaa gacctccgtt acgtgaatgc gcccgcgtac atctcggagg tgagcgtcga
     1561 cg
//
LOCUS       DATLMA010000251         1599 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_687447, whole genome shotgun sequence.
ACCESSION   DATLMA010000251 DATLMA010000000
VERSION     DATLMA010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687447"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VNA10_03130"
     CDS             <1..690
                     /locus_tag="VNA10_03130"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003386377.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HVG36702.1"
                     /translation="NFDIVHFNLHKTFTTPHGGGGPGAGPVGVKKPLEPFLPVPVIGL
                     NGRGYHLNYDRPKSIGKVRAWYGNFALLVRAYAYILRMGGDGLKEVSERAVLNANYIR
                     HRLTGVLDVPFGGLRKHEFVASAAKLAAEKGVRTVDLAKRLMDFGYHPPTVYFPHLVE
                     EALMVEPTETETKETLDGFVDALAKIVKEDPETLHSAPHNTSVARVDEVQAAREPVLS
                     WRTAKARKPVS"
     gene            complement(685..1332)
                     /locus_tag="VNA10_03135"
     CDS             complement(685..1332)
                     /locus_tag="VNA10_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011498356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /protein_id="HVG36703.1"
                     /translation="MDFETWQPFYEQILKEFGFSREKDEAVAAELDKLLGGNRVSDSS
                     LRKIIRGKEVTVAGNGPNVAEEIGEARGLLLTADEATSVALEKGLLPAILVTDLDGTV
                     TDQVKANAEGTIAVIHGHGDNGPAVGQWAPRFSGATVATTQSRPTGGLRNFGGFTDGD
                     RAVFLADHFGAARIHLVGFDFEHPNAKDLDRRTKQRKLDWAYILLGALNRDELEL"
     gene            complement(1350..>1599)
                     /locus_tag="VNA10_03140"
     CDS             complement(1350..>1599)
                     /locus_tag="VNA10_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36704.1"
                     /translation="ISAYLRHGRAPRHAVAVAVTFVALGLLVLGMTQILQTILGEYNP
                     AASLPLIYLSMGLALFLVAITGLSYRTRGERSDTPDQS"
BASE COUNT          289 a          522 c          513 g          275 t
ORIGIN      
        1 aacttcgaca tcgtccattt caatctgcac aagaccttca cgacgcccca tggcggcggc
       61 ggaccgggag ccggacccgt cggcgtgaag aaaccgctcg agccgttcct gccggtcccg
      121 gtcatcggcc tcaacggccg cggctaccat ctgaactacg accggccgaa atcgatcggg
      181 aaggtgcgcg cgtggtacgg gaacttcgcc ctcctggtgc gagcgtacgc gtacatcctc
      241 cggatgggcg gcgacggact gaaggaagtc tccgagcgtg cagtgctgaa cgcgaattac
      301 atccgtcacc ggctgaccgg cgtcctcgat gtgccgttcg gcggtctccg gaaacacgag
      361 ttcgtcgcga gtgccgcgaa gctcgcggca gaaaaaggcg tccgcacggt cgacctcgcg
      421 aagcgcctca tggatttcgg ataccatccg ccgaccgtgt acttcccgca cctggtcgaa
      481 gaggcactca tggtcgaacc gacggagacg gagacgaagg aaacgctcga tggcttcgtc
      541 gacgctcttg cgaagatcgt gaaagaagat cccgagacgt tgcactccgc cccgcacaac
      601 acgtcagtgg cgcgcgtcga tgaggtccag gcggcccgcg aaccggtcct cagctggcga
      661 accgcgaagg cccgcaagcc cgtgtcatag ttcgagctcg tcccgattga gagcgccgag
      721 gaggatgtac gcccagtcga gcttccgctg cttcgtgcgg cggtcgaggt ctttcgcatt
      781 cggatgctcg aagtcgaaac cgaccagatg gatgcgcgcg gcgccgaaat gatccgcgag
      841 gaacaccgcc cgatctccgt ccgtgaagcc gccgaaattc cggagccctc cggttggccg
      901 ggattgcgtc gtcgcgacgg tggcacccga gaaccgcggg gcccattgcc ccacggccgg
      961 tccgttgtcg ccatggccgt ggatcaccgc gatcgtgccc tcggcgttcg ctttcacctg
     1021 atccgtcacg gtcccatcaa gatcggtcac gaggatcgct ggaaggaggc ctttctcgag
     1081 cgcgaccgaa gtcgcctcgt ccgcggtgag gaggagcccg cgagcctccc cgatctcctc
     1141 cgcgacgttc ggcccgtttc cggccaccgt gacttccttc cctcggatga tttttcgaag
     1201 gctggagtcg gaaacacgat tcccgccaag gagcttgtcg agctccgccg caaccgcttc
     1261 gtccttctcc cgagagaagc cgaactcttt caggatctgt tcgtagaacg gctgccaggt
     1321 ctcgaagtcc atccgacccc tcggcgcgcc tagctttggt cgggggtatc ggagcgctcc
     1381 cctcgcgtcc ggtatgagag gcccgtgatg gcgacgagga acagggcaag gcccatgctc
     1441 aggtagatga gaggcaacga cgcggccggg ttgtattctc cgaggatcgt ctggaggatc
     1501 tgcgtcatcc cgaggaccag gaggcccagg gcgacgaacg tcaccgcgac ggcgaccgcg
     1561 tgtcggggag cccgtccgtg gcggaggtac gcgctgatg
//
LOCUS       DATLMA010000252         1319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_388726, whole genome shotgun sequence.
ACCESSION   DATLMA010000252 DATLMA010000000
VERSION     DATLMA010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388726"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..389
                     /locus_tag="VNA10_03145"
     CDS             198..389
                     /locus_tag="VNA10_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36705.1"
                     /translation="MGIKERIEQEAKDLTSRAGEILKEKGEELFAEAKDKLGDKVSDI
                     VDEQKKKISDRLDAETKKK"
     gene            421..1302
                     /locus_tag="VNA10_03150"
     CDS             421..1302
                     /locus_tag="VNA10_03150"
                     /inference="COORDINATES: protein motif:HMM:NF018247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HVG36706.1"
                     /translation="MKIRARSILITGLAVLLLAAGSPAFGAEKAKGDKVDLNSASQSE
                     LEALPGVGPALAKRIIDNRPYSSVSGLSKAGVPAGTISKLRGLVKAGRATREAKKEER
                     PVAKTEKPAAKTEKAQAKEEKKAEKAAIASGGKVDLNSASAAELEALPGVGAATAKKI
                     MANRPYSSVADLSRAGVSASTMNKIRDKVQVGTAARAERAAERTTEKTASREPAAKEE
                     RKSSTSAAAGKSEPSVAYQAPPSKGMVWVNLETKVYHREGDRWYGRTKRGKYMSEADA
                     VRQGYRLSKEKDEPAKP"
BASE COUNT          293 a          388 c          454 g          184 t
ORIGIN      
        1 ccctcctttt cggcgcgact cgggtcgcgc cctttttttg gcatgaagag tccctccgtt
       61 cacccggttc acgaccggtt cacggtcttt tcgagtagct tccctctggc cgatcgagcc
      121 agacttccgc tgcgcgccga atgcgagcgt tcgatgccgg gcggtttgca cggaagcacg
      181 cgagaaagga gacagcgatg ggaatcaagg aaagaatcga gcaggaggcg aaagacctga
      241 cgagccgggc cggcgagatt ctgaaggaaa aaggggaaga gctgttcgcc gaagcgaaag
      301 acaagctcgg cgacaaggtc tccgacatcg tcgacgagca gaagaaaaaa atctccgaca
      361 ggctggacgc ggaaacgaag aagaagtagt ccttcgggac tctcgaaagg agggcatgcg
      421 atgaagattc gcgcgcgatc gattctgatt acgggtctgg cggttcttct gctggcggcc
      481 ggctcccccg ccttcggagc ggaaaaggcg aagggggaca aggtcgatct gaactcggct
      541 tcgcagagcg agctcgaagc gctgcccggc gtggggccgg cgctcgccaa gaggatcatc
      601 gacaaccggc cgtactcctc ggtctccggg ctgtcgaagg ccggtgtccc cgcggggacc
      661 atctcgaagc ttcgcggcct cgtcaaggcg ggccgcgcga cccgggaggc gaagaaggaa
      721 gaaaggcccg tcgccaagac ggaaaagcct gccgccaaaa cggagaaggc gcaggccaag
      781 gaggagaaaa aggccgagaa ggctgccatc gcctcgggcg ggaaagtgga tctgaactcc
      841 gcctctgccg cggaactcga agccctgccc ggagtcggag ccgccaccgc gaagaagatc
      901 atggcgaacc ggccgtactc ctcggtggcc gatctctccc gggccggcgt ctccgcctcg
      961 acgatgaaca agatccggga caaggtccag gtcggcactg cggccagggc ggaacgcgcg
     1021 gccgagagga cgacggagaa aaccgcgagc cgcgagccgg cggcgaaaga agagcggaag
     1081 agctccacct ccgctgcagc gggaaagtcc gagccgtccg tcgcctatca ggctccgccg
     1141 tcgaagggca tggtctgggt caacctcgag acgaaggtct accaccgtga gggagatcgc
     1201 tggtacggac gcacgaagcg cggcaagtac atgagcgagg ccgacgcggt tcgtcagggg
     1261 tatcggctgt cgaaggagaa ggacgagccc gcaaagccgt aactcccgtc cgttgttcg
//
LOCUS       DATLMA010000253         2072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_869169, whole genome shotgun sequence.
ACCESSION   DATLMA010000253 DATLMA010000000
VERSION     DATLMA010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_869169"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..593
                     /locus_tag="VNA10_03155"
     CDS             105..593
                     /locus_tag="VNA10_03155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36707.1"
                     /translation="MKGSSSHQAPWSPEYRVRVSFGVPLDFAFAWCTDYTPEDPGLEG
                     ESYQRKIVERAAHRVIFEDLEETADGWDWGRDVVTLSPPNRWHMDGVGNRRDVTADYV
                     LSPLPDGRTRFDLRWRRQPKVPDAKKLTKAEREASTLRAWKLFAAAMERDYRRSRRSR
                     TK"
     gene            complement(618..917)
                     /locus_tag="VNA10_03160"
     CDS             complement(618..917)
                     /locus_tag="VNA10_03160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36708.1"
                     /translation="MVKKRKGSSTAKSKKTLDPRVVDLRKKILHLDPYSGWFPAGATK
                     RIMSIVDADLEPIGELETGSDGFVQLAALVGRRFVRISYYPGQPYATLTWITLEK"
     gene            complement(1121..1552)
                     /locus_tag="VNA10_03165"
     CDS             complement(1121..1552)
                     /locus_tag="VNA10_03165"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HVG36709.1"
                     /translation="MTTLRAKLNVSKAEAVFGRHDIAIAGGFRNTDELRAFASEVQAW
                     DHVRGLRSYPALQDWTSSKKDGHASNAYLLIRSADTQKTMSALKNVPEIQEIIGTTGD
                     EDIVARISADPRANLLESVVTKVQGMPGVLSTETLPAFSMY"
BASE COUNT          404 a          622 c          635 g          411 t
ORIGIN      
        1 cgggttcatc ggcttaaggg ttcccacgtt cgaccaggcg cggcaagtct tatctcgctt
       61 cagcgccgtc cccgggtcag cgtcgaaccg aggcatcgac caccatgaaa ggaagcagct
      121 cgcatcaggc gccgtggagt cccgaatatc gcgtccgcgt ctcgttcggg gttccgctcg
      181 actttgcatt cgcctggtgc acggactaca cgcccgagga tccgggcctc gaaggggagt
      241 cctatcagcg gaagatcgtc gagcgtgcgg cgcatcgcgt catcttcgaa gacctggagg
      301 agaccgcgga cggatgggac tggggccggg atgtcgtcac cttgtcaccc ccgaaccgat
      361 ggcacatgga cggcgtcggg aatcggcgcg atgtgacagc cgactatgtc ctctcgcctc
      421 tcccggacgg gaggacccga ttcgacctcc gatggaggcg gcagcccaag gtccccgacg
      481 cgaagaagct cacgaaggcg gaacgggagg cctccacgct gcgggcatgg aaattgttcg
      541 ccgcggcgat ggaacgggac taccggcgct cgcgacgttc ccgcacgaag tgatcgcgcg
      601 attgcgagac cacgactcta tttctccagc gtgatccacg tcagggttgc gtacggctgg
      661 cccggataat aggagattcg aacgaaacgt cggccgacga gcgccgccaa ctggacgaac
      721 ccgtcgctgc ccgtctcgag ctctccgatc ggctccaggt ccgcatcgac gatgctcatg
      781 atccgcttcg tcgcgccggc ggggaaccat ccggaatagg ggtcgagatg gaggatcttc
      841 tttcggaggt ccacgacacg cgggtccagt gtcttcttcg atttcgctgt gctcgagcct
      901 ttccttttct tgaccatcgg ccctccggat gcggtcgaaa tacatatcgt tgactgggcc
      961 acagaccccg gagtctcgcc cggacggtcg ggaggtacgt gaagcgtaaa ggggcggcgt
     1021 tgtatttcgt ctaaggcgaa accgtcgaga aacagggatc actgagtcaa ctaaaagggg
     1081 acgaaccggt taaaccgcgg cccgtccgtg agtcgttgat tcaatacatc gagaacgccg
     1141 ggagcgtctc ggtcgagagc acgccgggca tgccctggac cttcgtcacg acggactcga
     1201 ggaggtttgc acgggggtcc gcgctgatgc gggccacgat gtcctcatct ccggtcgtgc
     1261 cgatgatctc ctggatctcg gggacgttct tcaacgcgct catggtcttc tgcgtgtctg
     1321 cggaccgaat gaggaggtac gcgttgctgg cgtgcccatc tttcttactc gacgtccagt
     1381 cctggagtgc cggatagctc cggagccctc ggacgtggtc ccatgcttgg acctcggacg
     1441 cgaatgcgcg cagctcgtcc gtgttacgga agccgcccgc gatggcgatg tcgtgacgcc
     1501 caaagacggc ctcggccttg ctcacgttga gcttggcgcg gagggtcgtc aacgttctct
     1561 ctacatatgt tggcgccact ttgacaaaga tgacgcttgt tccaaatagt tcgcttggca
     1621 ttcaaaattc cttcgtctct ccttagaatc cccacgcact taaggatgct tacgacccgc
     1681 gacccagata aaccacatgt ggtttattcg gagacgcaaa tagaccatac atggtcaatc
     1741 accgtgtgga cgcgtcacat ggagaatctg gttgattcgt gtcggtgaag tgacgcgatg
     1801 tggttaaacg acggcggcga atcacctggg agaatcgcag cagctcgtcc cggcgtgcgc
     1861 aactgaaaat tgactcggaa gctttcttac acatgacggt cttcggggcc ggctatggcc
     1921 gtcgaccttc gagagacgaa catcgacccc gagcggcccg agtaccgcaa gatgctggag
     1981 aacctccagg ccaacatcct caaacctcac ggccggaaag aatcggacca tctgttcgtc
     2041 cgcttcaccg cggagcctga ggccatttgt gc
//
LOCUS       DATLMA010000254         1189 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_812808, whole genome shotgun sequence.
ACCESSION   DATLMA010000254 DATLMA010000000
VERSION     DATLMA010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_812808"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VNA10_03170"
     CDS             <1..540
                     /locus_tag="VNA10_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020879138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36710.1"
                     /translation="DLHRYRREILQRVNFSSAYISLPFNLSVRENLDVFGRLYGVRDR
                     KRRIMELLELFEIPDVVDTVTGKLSSGQVTRVNLCKAFLNDPEVLFLDEPTASLDPDI
                     AEKVRTALKRVQRERGVTMVYTSHNMREIELVCDRVIFLMHGRVVAEGTPREILERAD
                     SESLEKVFITLARGGRLEG"
     gene            543..>1189
                     /locus_tag="VNA10_03175"
     CDS             543..>1189
                     /locus_tag="VNA10_03175"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36711.1"
                     /translation="MWGRVNALLLRYLYLYRRSLARSMEIFFWPVMDLLVWGFVSVYF
                     RQVGVPKAVLFLLGGLIFWDVFYRSQQAITLSLTEEIWVRNLLNVFIAPVRIAEVVLA
                     TCLLGVIRALLSTAVLGVLAWFLYAFDLLRLGPALLPYFASLILFGWAVGMCTMAVIL
                     RFGHAAEALIWGTPFLLQPISAVFYPLAVLPPWLQTIARLLPSTHVFEGMRATLET"
BASE COUNT          169 a          397 c          366 g          257 t
ORIGIN      
        1 gaccttcacc ggtatcgccg ggagatcctg cagcgcgtga acttctcttc cgcgtacatc
       61 tcgcttccgt tcaacctgtc ggtccgggaa aacctggacg ttttcgggcg gctctacgga
      121 gtgcgggatc gcaagcggcg gatcatggag cttctcgagc tcttcgagat tcccgacgtg
      181 gtggatacgg tcaccggcaa gctctcgtcc ggacaggtca cgcgggtcaa cctctgcaaa
      241 gctttcctga acgacccgga agtcctcttc ctggacgagc cgacggcgag cctggatccg
      301 gacatcgctg aaaaggtccg cacggcgctg aagcgcgtcc agcgggagcg cggcgtgacc
      361 atggtctaca catcgcacaa catgcgcgaa atcgagctcg tctgcgatcg cgtcatcttt
      421 ctcatgcacg ggcgtgtcgt cgccgagggg acgcctcgcg agatcctcga gcgcgccgac
      481 tcggagtcgc tcgagaaggt cttcatcacg ctcgcgcgcg gggggcggct ggagggctga
      541 cgatgtgggg ccgggtgaat gctctgctgc tgcgctacct gtatctgtat cgccgcagcc
      601 tcgcccggtc gatggagatc ttcttctggc cggtgatgga cctgctcgtc tggggtttcg
      661 tcagcgtcta cttccggcag gtgggcgttc cgaaagcggt cctgttcctc ctcggcgggc
      721 tcatcttctg ggacgtcttt taccggtcgc agcaggcaat cacgctgtcg ctgaccgagg
      781 agatctgggt ccgcaacctc ctgaacgttt tcatcgcccc ggttcgaatc gccgaggtcg
      841 tcctcgcgac ctgcctgctc ggagtgatcc gggcgctcct ctcgacggcg gtcctggggg
      901 ttctggcctg gttcctctac gccttcgacc tcctccgcct cggtcccgcg ctcctcccct
      961 atttcgcgag cctcatcctc ttcggctggg cggtggggat gtgcaccatg gcagtcattc
     1021 tccgcttcgg acatgccgcc gaggccctca tctggggcac tccgttcctg ctgcagccga
     1081 tctccgcggt cttctatccg ctggcggttc tcccaccatg gctccagacg atcgcgcggc
     1141 tcctcccatc gacacacgtc ttcgagggaa tgcgcgcgac gctcgagac
//
LOCUS       DATLMA010000255         2656 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_812946, whole genome shotgun sequence.
ACCESSION   DATLMA010000255 DATLMA010000000
VERSION     DATLMA010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_812946"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VNA10_03180"
     CDS             complement(<1..203)
                     /locus_tag="VNA10_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36712.1"
                     /translation="MAGLLALILLIGVPSVAWLLALFSLHAARADLMREGPPGASSEL
                     SQSRILLHAGYSGMPILFGVILF"
     gene            complement(233..487)
                     /locus_tag="VNA10_03185"
     CDS             complement(233..487)
                     /locus_tag="VNA10_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013037155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0147 family protein"
                     /protein_id="HVG36713.1"
                     /translation="MDTEAKLKQIMDVLDQIAEDTSVPRNIRRGAAEAKARLAKKNEA
                     LDLRVTSAIMIMDDLANDPNIPLHGRTLIWNVISQLETVK"
     gene            complement(518..838)
                     /locus_tag="VNA10_03190"
     CDS             complement(518..838)
                     /locus_tag="VNA10_03190"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HVG36714.1"
                     /translation="MAIGSDMEQALTALYGEDQVAAVITLKVDTKEADRIATEIAKFE
                     VIQDVFLVTGDTDIIAKARFKNYKGLKDFVLSNLAPIPGIKDTKTLMVVTTYKEGGQS
                     RAQS"
     gene            complement(892..1725)
                     /locus_tag="VNA10_03195"
     CDS             complement(892..1725)
                     /locus_tag="VNA10_03195"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HVG36715.1"
                     /translation="MADDAVTVAVVLLLVSLGIATFLETRYLRKKMKNRRVRTAKRDD
                     ELQDNAHNAVVTTKAIMSSLQRQGIRSEEANAWLQEAQTANARHNYRVAMDLTAKAKD
                     RLLALKAAQASKGDLAKLDRLSMGGSTDEMTTKEVLQKEIPPNMLQSKFSIEVAGTAV
                     EQGRLSGRDVSQATQLLEAAKTRFDAKDYASALTISRQSKRAAAGEQVDVSITPAAPQ
                     PPPTPGGRLCPTCGASLAEDDMFCRKCGARLAPAACSSCGASLLSDDAYCPKCGTPVP
                     Q"
     gene            complement(1812..>2656)
                     /locus_tag="VNA10_03200"
     CDS             complement(1812..>2656)
                     /locus_tag="VNA10_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011695382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formate--phosphoribosylaminoimidazolecarboxamide
                     ligase"
                     /protein_id="HVG36716.1"
                     /translation="DRADDLVARQAVTVPHGSFVEYMGADVFAKLPIPTFGNREVLRW
                     ESDRDKQREWLTSAGVPMPLKIEHPKDIDRPVFVKYYGAKGGRGSFIAKNYEDFKESI
                     QPGMKFTIQEYVVGTRYYIHYFYSPFATSGYTLSKGGLEMLGVDRRDEANIDEMYKLG
                     AQEALRKMGVHPTFVVTGNMPVVLRESLLPKAFEMGERTVERSIALFGGMIGPFCLET
                     IVSDKLEFKVFEISTRIVAGTNLFIGGSPYADLAEPGMSTGRRIAREIRVAQKQGRLA
                     DVLS"
BASE COUNT          462 a          843 c          790 g          561 t
ORIGIN      
        1 aaaaacaaga tgactccgaa caggatcggc attcccgagt atcccgcgtg gagaagaatc
       61 cgtgactgcg aaagttcgga agaagctccc ggcggcccct ccctcatgag gtctgcccgc
      121 gccgcgtgca acgaaaagag cgcgagcaac caggcgacgg acggtacgcc gataagcagg
      181 atgagcgcga gcagccccgc cacagccgat aatctggctg gcgaagttaa gcttacttga
      241 ccgtctcgag ctgcgaaatc acgttccaga tcaaggtccg gccgtggagt gggatgttcg
      301 gatcgttcgc gagatcgtcc atgatcatga tggcgctcgt gacgcggagg tcgagcgcct
      361 cattcttctt cgcgaggcga gcctttgctt ccgccgcccc gcgtcggatg ttcctcggaa
      421 cggacgtgtc ttcggcgatc tggtcgagga cgtccatgat ttgcttcagc ttcgcttcgg
      481 tgtccatctg accatctccg ggcgtggtgc gtcgccctca actttgcgcc ctcgattgtc
      541 cgccttcctt gtaggtcgtg acgaccatca aggtcttcgt gtccttgatc cccggaatcg
      601 gcgcgaggtt cgagagcacg aagtctttca accccttata gttcttgaat cgcgctttcg
      661 cgatgatgtc cgtgtccccc gtcaccagga acacgtcctg aatcacctcg aacttcgcga
      721 tttccgtggc gatccggtcc gcctctttcg tatccacttt caaggtgatg acagcagcga
      781 cctggtcctc tccgtacagg gcggtgaggg cttgttccat gtcgcttccg atcgccatat
      841 cgcgagggat ggaggccctc gtaattaagg tatccgcgca cgttcgaaaa ctcattgagg
      901 aacaggcgtt ccacacttgg ggcagtacgc atcgtcggaa agaaggctcg caccgcatga
      961 gctgcacgcc gccggggcga gacgtgcacc gcacttgcga cagaacatgt cgtcctcagc
     1021 aagcgacgcc ccgcacgttg gacacagacg accaccgggc gtcggaggcg gttgcggcgc
     1081 agctggggtg atggacacat cgacttgttc tccggcggcc gcgcgctttg actggcggga
     1141 aatcgtgagc gcggaggcgt agtcctttgc gtcgaatcgc gtcttcgccg cctccagaag
     1201 ttgcgtcgct tgggacacat cgcgaccgct gagacgcccc tgttccaccg cggtcccggc
     1261 gacctcgatc gagaacttcg attgaagcat gttcggggga atttctttct gcaacacttc
     1321 cttggtcgtc atctcatccg tcgaacctcc catggagagc cgatccagct tcgccagatc
     1381 cccttttgaa gcctgcgccg ccttgagggc gagcagtcga tctttcgcct tcgcggtcag
     1441 gtccatggcc acgcgatagt tgtgccgcgc gttcgccgtc tgcgcttctt gcagccatgc
     1501 gttggcttct tcgctccgga tcccctggcg ttggaggctc gacatgatcg ccttcgttgt
     1561 gacgactgcg ttgtgcgcgt tgtcctggag ttcgtcgtcg cgcttcgccg tccggacccg
     1621 ccggttcttc atcttctttc gaaggtaccg agtctcgagg aaggtcgcga tgccgagcga
     1681 aacaaggagg aggacaaccg cgacggtcac cgcgtcgtcg gccatgggtg gcggcgcatg
     1741 ttgggcgatg ccataaaagt gtttcccctc ccttttcccg gatgattccg tgccgggtgg
     1801 tggcgcgcgc ctcagctgag gacgtccgcc agacgtcctt gtttctgggc gacccggatc
     1861 tccctcgcga tgcggcggcc cgtcgacatc ccgggctcgg cgaggtcggc gtacggggat
     1921 ccgccgatga acaggttcgt cccggcgacg atccgcgtcg aaatctcgaa gaccttgaac
     1981 tccagcttgt cggacacgat cgtctccaga cagaatggac cgatcatgcc gccgaacagg
     2041 gcgatcgatc gctccacggt ccgctccccc atctcgaacg ccttcggcag gagcgactcc
     2101 cgcaagacga ccggcatgtt ccccgtcacg acgaacgtcg ggtggacgcc catcttgcgc
     2161 aacgcctcct gggcgccgag cttgtacatc tcgtcgatgt tcgcctcgtc ccgccggtcc
     2221 actccgagca tctcgaggcc ccccttcgag agcgtgtagc ccgacgtcgc gaatggcgag
     2281 tagaagtagt ggatgtaata gcgcgtcccg acgacgtact cttggatcgt gaatttcatc
     2341 ccgggttgga tcgactcttt gaagtcctcg tagttcttcg cgatgaagga accgcggcca
     2401 cccttggcac cgtaatactt gacgaacacg gggcgatcga tgtccttggg gtgctcgatc
     2461 ttcagcggca tcgggacccc cgccgacgtc aaccattccc gttgcttgtc ccggtccgat
     2521 tcccatcgaa gaacctcgcg atttccgaac gtcggaatgg gcagcttcgc gaacacgtct
     2581 gcgcccatgt attccacgaa cgatccgtgg gggaccgtga cggcctgccg agcgaccagg
     2641 tcgtccgccc ggtcga
//
LOCUS       DATLMA010000256         1246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_506776, whole genome shotgun sequence.
ACCESSION   DATLMA010000256 DATLMA010000000
VERSION     DATLMA010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506776"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..546
                     /locus_tag="VNA10_03205"
     CDS             124..546
                     /locus_tag="VNA10_03205"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK/LysX family protein"
                     /protein_id="HVG36717.1"
                     /translation="MHPGVSARRQQPARTSIGVVEEVTLRGTKGDIRVLARIDTGAAR
                     TSLDTDLAARAGLGPVFDRVRVRAAAAHEPEERDVVDARVVIAGREFDVAVAITDRKD
                     MRYHMIVGMDILRDSGFLVDPSKGNGRENEGKRAHRNP"
     gene            628..843
                     /locus_tag="VNA10_03210"
     CDS             628..843
                     /locus_tag="VNA10_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain-containing protein"
                     /protein_id="HVG36718.1"
                     /translation="MIKPLSLLNQRISSNVMVELKGGRGYRGILDGFDPHMNLVLRNA
                     EEMQDNQAQRKMDLAIVRGDNVIYISP"
     gene            858..1025
                     /locus_tag="VNA10_03215"
     CDS             858..1025
                     /locus_tag="VNA10_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L37e"
                     /protein_id="HVG36719.1"
                     /translation="MTKGTASLGKMGRRSVHIRCRRCGQRAYHKQKKYCAACGFGRMK
                     KLRNYSWAKRH"
     gene            1028..>1246
                     /locus_tag="VNA10_03220"
     CDS             1028..>1246
                     /locus_tag="VNA10_03220"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008082969.1"
                     /note="Catalyzes first step of the de novo purine
                     nucleotide biosynthetic pathway; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HVG36720.1"
                     /translation="MSVDQVVSEVSDLRPREKCGIIGCSGTSPVTTDLFLGLRILQHR
                     GQESAGLAVYNGEMKSKRGMGLVHEVFSK"
BASE COUNT          242 a          364 c          430 g          210 t
ORIGIN      
        1 atccgagcca cacccgcgca gggaagcgat gcggttcgcg ggagaaaaac gtgtcgagtc
       61 cgagatcggc gcggttaagg ctatatcgcg ggacgtgtat cgatagcgcg aagggagttg
      121 gcggtgcacc cgggggtctc agcgcggcgg caacaaccgg cacgcacgag cattggcgtc
      181 gtcgaggagg tcactctccg cgggaccaag ggcgatatcc gggtgctggc gaggatcgat
      241 accggcgcgg cacggaccag cctcgacacg gacctcgcgg cgcgggcggg cctcggcccc
      301 gtctttgatc gcgtccgcgt tcgggcggcc gccgcgcacg agccggaaga gcgcgacgtc
      361 gtggacgccc gtgtggtgat cgcggggcga gagttcgatg tcgccgtggc gatcacggat
      421 cgcaaagaca tgcgatatca catgatcgtg ggcatggaca ttctgcggga ctccggtttt
      481 ctcgtggatc cgtcgaaggg aaacggacgc gagaacgagg ggaagcgggc tcaccgaaac
      541 ccgtgacagt cgtcgagagt tgcgtcctcg cgtcacgcct cccgtaaacc tttaagtacg
      601 ccgcctccat ggctgcgccg tggtccgatg attaagccgc tttctctcct caaccaacgg
      661 atcagttcga acgtgatggt tgagctgaaa ggcgggcggg ggtaccgcgg aatcctcgat
      721 ggattcgacc cgcacatgaa cctcgtcctc cgcaacgcgg aggagatgca ggacaaccag
      781 gcccagcgga agatggacct cgcgattgtc cgtggagaca acgttatcta catctcccca
      841 tgacgtaggt ggcctgcatg acgaagggga ccgcgtcgct tggcaagatg ggacggagga
      901 gcgtccacat ccggtgccgg cgctgcggtc agcgtgccta tcacaagcag aagaagtact
      961 gcgccgcctg cggcttcgga cggatgaaga aacttcgaaa ttactcctgg gcgaagaggc
     1021 attgacgatg tccgtcgacc aagtcgtgtc ggaggtctcc gaccttcgcc cgcgcgagaa
     1081 gtgcgggatc atcggctgct cgggcacctc gccggtgacg acggacctct tcctgggctt
     1141 gcgaatcctc cagcatcgcg gccaggagtc cgcgggtctc gcggtgtaca atggcgagat
     1201 gaagtcgaag cggggcatgg gcctcgtgca cgaggtcttc tcgaag
//
LOCUS       DATLMA010000257         1082 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_204708, whole genome shotgun sequence.
ACCESSION   DATLMA010000257 DATLMA010000000
VERSION     DATLMA010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204708"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..392)
                     /gene="rsrA"
                     /locus_tag="VNA10_03225"
     CDS             complement(150..392)
                     /gene="rsrA"
                     /locus_tag="VNA10_03225"
                     /inference="COORDINATES: protein motif:HMM:TIGR03988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mycothiol system anti-sigma-R factor"
                     /protein_id="HVG36721.1"
                     /translation="MDCDDCLQKLYAFLDQELESNDRTQVAKHLEGCTDCGDNLAFEE
                     RFLQVIRDCGTSDIAPVDLRRRVAERLRSVVPPPTA"
     gene            complement(403..984)
                     /locus_tag="VNA10_03230"
     CDS             complement(403..984)
                     /locus_tag="VNA10_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012950178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HVG36722.1"
                     /translation="MAEDAFESEALSYIDALYRTALRMTRSEADAEDLVQETYIRALR
                     FREQFTPGTNLKAWLFRILTNTFINAYRKRARQPQTAELDDVDEFSLYRKMSQDTPGS
                     NNADPEQEFLDGIVSSEVKEALAALPEKFRTTVLLDVEGFSYKEIAEMVGVPIGTVMS
                     RLHRGRKFLQQRLYDLARERGIAALRTSGPRPD"
BASE COUNT          190 a          335 c          324 g          233 t
ORIGIN      
        1 cgctcaagac aaccttagtg cttcttcttc gaggacttct tcgccttctt ctttgctggc
       61 atcagtggat cacctcctcc tggccactca ttgatggtta tatagacaca ctcacgtcac
      121 acatgtcaac agatgtgacc ggaaagagtt caagcggtcg gcggcgggac gacactccgt
      181 aaacgctccg cgacgcgtct tcggaggtcc acgggagcta tgtcggaggt tccgcagtcg
      241 cggatcacct gtaggaagcg ctcctcgaag gcgagattgt ctccgcagtc ggtgcacccc
      301 tcgaggtgct tggcgacttg agtacggtcg tttgactcga gctcctggtc gaggaacgcg
      361 tagagcttct ggagacagtc gtcgcagtcc atcccgccct ccctagtccg gtcgtggccc
      421 gctggtccgg agcgcggcga tcccacgctc gcgggcgagg tcatagagcc tctgctgaag
      481 gaacttacgc cctcggtgaa gccgcgacat gaccgtgccg atcggaactc cgaccatctc
      541 ggcgatctcc ttatatgaga acccctcgac gtcgagcagc accgtggtcc ggaacttctc
      601 cggaagggcg gcgagggctt ctttcacctc gctcgacacg atcccgtcga gaaactcctg
      661 ttcggggtcg gcgttgttcg atccgggtgt gtcctgggac atcttccggt agagcgagaa
      721 ctcgtccacg tcgtccagct cggcggtctg aggctgacgg gcccgcttgc ggtaagcgtt
      781 gatgaacgtg ttggtaagga tgcggaagag ccaggccttg agattcgtcc caggggtgaa
      841 ctgctcgcga aagcggagtg cacggatata tgtttcttgc acgagatcct ctgcgtccgc
      901 ctccgatcgc gtcatccgga gcgccgtccg gtacaacgcg tcgatgtagg agagagcctc
      961 gctttcaaac gcgtcctcgg ccatccggtc actttatcgc aacgttcccg gcggtcctgc
     1021 cattcccgat acgctccgaa gagtggaccg gcggcgtctc cgcgctatcg ctcgtcgact
     1081 cg
//
LOCUS       DATLMA010000258         1018 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_204896, whole genome shotgun sequence.
ACCESSION   DATLMA010000258 DATLMA010000000
VERSION     DATLMA010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204896"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VNA10_03235"
     CDS             <1..860
                     /locus_tag="VNA10_03235"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HVG36723.1"
                     /translation="KILTPGMSAYALLLNERSRVLGDVRVYAFADSLVLDIEAAQKDG
                     ILQLMETARVSDEVEFLDLGSAGHIEVHGPAAGDLLAGVLSADLRGLPPDAFLTFAVD
                     KQHEGHIGRIRGLGELGFAIWSPGSSLSEVWDALAREDVTPIGRDSAEVLRIEAGTPR
                     FGTEMGEDTLALEVAPDFALSFTKGCYVGQEIVARGTYVGQVRRKVFGLRADADVPPV
                     HGDKVSKGTREVGKVTSGTWSPTTGWVIALALLRLDAVSAADELFINRGGWDLRARLH
                     PLPFVAGSA"
BASE COUNT          172 a          313 c          350 g          183 t
ORIGIN      
        1 tgaagatcct cacgcccggg atgtccgcgt atgccctctt gctcaatgag aggagccgcg
       61 tgctcgggga cgtgcgcgtg tacgcgttcg cagactcgct cgtcctcgac atcgaggcgg
      121 cgcagaagga cggaatcctg cagctcatgg agacggcacg ggtgagtgac gaggtcgagt
      181 tcctcgacct cggatcggcc gggcacatcg aggtccacgg gccggccgca ggcgatctcc
      241 ttgcgggtgt tctttctgcg gatctccgcg gacttccccc cgatgcgttc ctcactttcg
      301 cggtcgacaa acaacacgag ggtcatatcg gccgaatccg cggactgggc gaactcggct
      361 tcgccatctg gtcccccgga tcgagcctca gcgaagtctg ggacgccctg gctcgggagg
      421 acgtaacccc gatcgggcgg gactcggccg aggtcctccg gatcgaggcg ggcaccccgc
      481 ggttcggaac ggagatgggg gaggacacgc tcgctctcga ggtcgcgccg gatttcgcgt
      541 tgagcttcac gaaagggtgc tacgtcggcc aggagatcgt ggcgcgcggg acgtacgtgg
      601 gccaggtgcg gcgcaaagtg ttcggtctcc gcgcggacgc cgatgttcct ccagtccatg
      661 gcgacaaggt gtcgaagggg actcgagagg tcggtaaggt cacgagcggc acctggtccc
      721 cgacgaccgg ctgggtgatc gccctcgcgc tcctccggtt ggacgcggtg tcggcggccg
      781 atgagctgtt catcaatcga ggcggctggg acctccgcgc ccgattacat ccattgccgt
      841 ttgttgcagg ctccgcgtga tgaggcgggc agctccccgc cactggaaca catgtttggt
      901 ccgaacaaag ccgcatcgac gtgaggatgc tgcgagcaac acgagaccgg ctgaacctag
      961 ggtgttgacc gcgatgacct tggacttgga atactcttga gtcgccgccc gagcaata
//
LOCUS       DATLMA010000259         1084 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_389664, whole genome shotgun sequence.
ACCESSION   DATLMA010000259 DATLMA010000000
VERSION     DATLMA010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389664"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VNA10_03240"
     CDS             <1..715
                     /locus_tag="VNA10_03240"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HVG36724.1"
                     /translation="PLVFANLGAPQLVPQEGKRAYGVADARKAMQMINADALIVHLNF
                     LQEVVQPEGDRRAKGCLAAIKALAAKFPLMAKETGAGISRETAQKLKAAGARAIDVGG
                     LGGTSFSAVEHYRARKEAASLKERLGATFWNWGIPTPASLLLADVGLPLVATGGVRSG
                     LDVAKGIALGATMAGMAKPMLEAAKVSADAAIQELRAVVEELKAAMFLTGSTSIEALQ
                     ERPVIVSPPTASWLEAGEA"
     gene            719..>1084
                     /locus_tag="VNA10_03245"
     CDS             719..>1084
                     /locus_tag="VNA10_03245"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HVG36725.1"
                     /translation="MSALATSSAEDRLESLLKPYRDRSNAHIQAIWEEFAAEHPVGAF
                     PSSRTMRLNSRLFTAGKRYRYALALAGYQLLTGETPSRGLERAATWLEWYHLYTLFLD
                     DIMDEDVRRRTLASAWATDA"
BASE COUNT          195 a          341 c          373 g          175 t
ORIGIN      
        1 cccgctcgtg ttcgcgaacc tgggcgcgcc ccagctcgtg ccgcaggaag gcaagcgtgc
       61 gtacggggtc gccgacgcac ggaaggcgat gcagatgatc aatgcggacg cgctgatcgt
      121 ccacttgaat ttccttcagg aggtcgtgca gcccgaaggc gatcgacgcg cgaaaggctg
      181 cctcgccgcg atcaaggcat tggccgccaa gtttccgttg atggcgaagg agaccggtgc
      241 cggcatctcc cgggaaacgg cgcagaagtt gaaagccgcg ggcgcccggg cgatcgatgt
      301 cggcggcctc ggggggacct cgttctcggc ggtcgaacat taccgtgcgc ggaaagaggc
      361 cgcgagcctg aaggagcgcc tcggcgcgac gttctggaat tgggggatcc cgaccccggc
      421 gtcgctcctc ttggccgacg tcggattgcc gctcgtcgcg acgggcggcg tgcgaagcgg
      481 tctcgacgtc gcgaagggaa tcgccttggg ggccacgatg gccgggatgg cgaaaccaat
      541 gctcgaggcc gcaaaggttt ccgcggatgc cgcgatccaa gagctgcgcg cggtcgtcga
      601 ggaactgaag gcggcgatgt tcctcaccgg ttcgacgtcg atcgaagcgc tgcaggagcg
      661 tcccgtcatc gtgagtcctc cgaccgcgag ctggctcgag gccggagagg cgtgagcgat
      721 gtcggccctt gcgacctcgt ctgcggagga ccgactcgaa tccctcctga aaccatatcg
      781 cgaccgatcg aacgcccaca tccaggcgat ttgggaggag ttcgcggcgg aacatcccgt
      841 cggtgccttc ccatcgagcc gaacgatgcg gctcaactcc cgactcttca ccgcgggaaa
      901 gcgatatcgc tacgcgctcg ccctcgccgg atatcaactt ctgacgggag agacaccatc
      961 ccggggcctc gagcgcgccg cgacgtggct cgaatggtac catttgtaca ccttgttcct
     1021 ggacgacatc atggacgagg atgtccggag acggacgctc gccagcgcat gggcgacgga
     1081 tgcg
//
LOCUS       DATLMA010000260         1795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_446609, whole genome shotgun sequence.
ACCESSION   DATLMA010000260 DATLMA010000000
VERSION     DATLMA010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446609"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..177)
                     /locus_tag="VNA10_03250"
     CDS             complement(<1..177)
                     /locus_tag="VNA10_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HVG36726.1"
                     /translation="MRDLLGGKGAGLAEMTRLGLSVPPGFTITTKACNAFARTGRFPP
                     GMWKQVEEALSAVEA"
     gene            complement(309..845)
                     /locus_tag="VNA10_03255"
     CDS             complement(309..845)
                     /locus_tag="VNA10_03255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HVG36727.1"
                     /translation="MLYARISEERIGVLIGPEGTTKERLQKATGTRISVDSTSGEVTI
                     DETEAQDPVLALKAKDVIQAMARGFSEDRAFRLLDEDAYFEVLDIKDFAHSKNRVAQI
                     RARLIGTRGKTRRLIEELTGVEVSVWGHTVALIGGTFEMAIAREAVFMLLRGSEHKTV
                     YRFLERKRADLKVYQMGF"
     gene            complement(847..1611)
                     /locus_tag="VNA10_03260"
     CDS             complement(847..1611)
                     /locus_tag="VNA10_03260"
                     /inference="COORDINATES: protein motif:HMM:NF013341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protein kinase RIO"
                     /protein_id="HVG36728.1"
                     /translation="MIDERRLRILEIQVDALRTKEKDSQSRKTYDEVFDHAALLTIAD
                     LITDGVISTLDYPVSTGKEANVFHATGPDGRAKAVKIYRIANATFRNIAVYIDGDPRF
                     KKVKRAIRPTLWAWAQKEYKNLVRMEDAGVRVPTPERVHNNVLVMEYIGDETQPAPAL
                     REVRLDDPAAVYADVVANLQAIRKAELVHADMSEYNLLWWGGRVVVIDVGQAVTLDHP
                     RASEWFKRDVGNIARFFRRLRVNVTAAGLERAILGG"
BASE COUNT          288 a          596 c          552 g          359 t
ORIGIN      
        1 cgcctcgacg gcggacagcg cctcctcgac ctgcttccac atccccggcg ggaagcggcc
       61 cgtccgcgcg aaggcattgc aggctttcgt cgtgatcgtg aaaccgggcg ggacggagag
      121 gccgagacgg gtcatttccg cgaggccggc gcccttgccg ccgaggaggt cccgcatgga
      181 ggcgttcccc tcctcgaacg cgtaaacatg cttcgccagg ccggatcccc atcgtggtag
      241 tccggagctg atataacaat cttcggagcc gcatggattg caaccgatgc ggtgtgccgc
      301 cggacggttc agaagcccat ctggtacact ttgaggtccg cccgctttcg ttcgaggaac
      361 cggtacaccg tcttgtgttc gctcccccgg agcagcatga acaccgcctc gcgggcgatg
      421 gccatctcga acgtcccgcc gatcaaggcg accgtgtggc cccacacgct gacctcgacg
      481 ccggtgagtt cctcgatcag ccggcgcgtc ttcccccggg tgccgatgag gcgcgcccgg
      541 atctgcgcga cgcggttctt cgagtgcgcg aagtctttga tgtcgaggac ctcgaagtat
      601 gcgtcctcgt ctaagagacg gaaggcccga tcctcggaga agccgcgggc catcgcttgg
      661 atgacgtcct tcgccttgag cgcgaggacc gggtcttgcg cttccgtctc gtcaatcgtg
      721 acctcgcccg acgtcgagtc caccgagatc cgcgttcccg tcgccttctg caagcgttcc
      781 ttcgtcgtcc cctcgggccc gatcaggacg ccgatccgct cctccgagat ccgagcgtag
      841 agcatctcac cctccgagga tcgcccgctc gagtccggcc gccgtcacat tcacccggag
      901 tcgtcggaag aaccgcgcga tgttcccgac gtcgcgcttg aaccattccg acgcccgggg
      961 atggtcgagg gtcacggctt gcccgacatc gatgacgacg acccgccctc cccaccagag
     1021 caggttgtac tcgctcatgt ccgcgtgcac gagttcggct ttccgtatcg cctgcaggtt
     1081 cgccacaacg tccgcgtaga ccgcggcggg atcgtccaac cggacctcgc gaagggcggg
     1141 cgcgggctga gtctcatcgc cgatgtactc catcacgagg acgttgttgt ggacccgctc
     1201 cggcgtcggc acgcgaacgc cggcgtcttc catccggacg aggttcttgt actccttctg
     1261 cgcccacgcc cacaaggtgg gacggatcgc ccgcttcacc ttcttgaagc gcggatcccc
     1321 gtcaatgtac acggcgatgt tgcggaacgt tgcgttcgcg atgcggtaga tcttcacggc
     1381 tttcgcgcgg ccgtcgggtc cggtcgcgtg gaacacgttc gcctccttgc cggtgctcac
     1441 gggatagtcc agcgtcgaga tgactccatc cgtgatgagg tcggcgatcg tcaacagggc
     1501 tgcgtggtcg aagacctcgt cgtacgtctt gcggctctgc gaatccttct ctttggtccg
     1561 gagggcgtcg acctggatct ccaagattcg gagacgtcgc tcgtcaatca tgccgagaaa
     1621 acgaacattc cgctcgacta agagctttac gggtcgtcag aagatgttga tcgatttcgg
     1681 gatcaggccg cggcggctca tgtaggtcga ctcggtcttc gtgtaccggt gtttgatgtc
     1741 gcacttgtcg tcttggaact gccagacctt cacgacgagg aggtcgcctt cgcga
//
LOCUS       DATLMA010000261         2377 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_813619, whole genome shotgun sequence.
ACCESSION   DATLMA010000261 DATLMA010000000
VERSION     DATLMA010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813619"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..481)
                     /gene="pfdA"
                     /locus_tag="VNA10_03265"
     CDS             complement(35..481)
                     /gene="pfdA"
                     /locus_tag="VNA10_03265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit alpha"
                     /protein_id="HVG36729.1"
                     /translation="MSAGETELRRGIAVLDQYRAQIETLAQQQEIIRISLEEHMRARE
                     TLVRYREAGKAAEVLVPIGANSFLVAESKNTDKAFVSIGSDLLVYDDMDRQVERIDAR
                     IKSITEAANAIGSRLGDLQRRAEAHGAAVQDLYDRLQGPGTPNERS"
     gene            complement(478..708)
                     /gene="rpl18a"
                     /locus_tag="VNA10_03270"
     CDS             complement(478..708)
                     /gene="rpl18a"
                     /locus_tag="VNA10_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015505547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18Ae"
                     /protein_id="HVG36730.1"
                     /translation="MKAFRISGRFRMGRRWQPFSKELAAADEVVAREKLLSVLGSQHG
                     VPRKYIAIATVAEVPADQVEDHAVRYALEARA"
     gene            complement(753..>2377)
                     /locus_tag="VNA10_03275"
     CDS             complement(753..>2377)
                     /locus_tag="VNA10_03275"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG36731.1"
                     /translation="VGASQALTTGQRVVLSIEPTMWAEYASWSLVFLNLRNVSTLLTF
                     DLQKGIIPTLFSTVPALVFLYGATQIGWWFVLRPIRDRTKATSLRSAGEIDSGERVYD
                     PSASIPDAPPTARPVPMKSSFVEPPPPAHSTPPPPPVPTPVIQASMPPIQTRTPPLPR
                     PMPRAPIREPETAETLVRKAAALVATGNYEAALVGFVEALRLDGDYVPALQGKARCQE
                     RLNQHAEALETYRRILARDRRNVDSLRAVARLHMEQRHWRECLESVEDLLRLRPNEAA
                     ALEMKGDALTNLGRRPEALAAYEAAATVDPSDANLRQKIEEVRVDVPGLLSRALIASA
                     SGNYTAALNLFDDILEVEPSNGNALIGKAVAYRRSGKPQEALNCLDLVLGVQPGNSSA
                     LLNRGNILLEQGDLEDALDSFDRLTQLYPNDEEAWAAQGEVLVKMGRDDDAQRAFTEA
                     LKLSPGDEGIQRRILDLEAAKAEGPDLLDELVHVKGIGRARAKALVDAGFDSPEDFAK
                     ATPKSLMAVKGVTRKVAEELLEHFRATMAQVR"
BASE COUNT          363 a          801 c          772 g          441 t
ORIGIN      
        1 agccggcgag ccgttcccgg agggacttga acatctagct ccgctcgttc ggcgtgcccg
       61 gcccctgcag ccggtcgtag agatcttgga ccgccgcgcc gtgcgcctcc gcgcgccgtt
      121 gcagatcccc gaggcgcgag ccgatcgcat tcgccgcctc ggtgattgat ttgatccgtg
      181 cgtcgatccg ctcgacctgt cgatccatgt catcgtagac gaggaggtca gagccgatcg
      241 agacgaacgc cttgtcggta ttcttcgatt cggcgaccaa gaacgaattc gcgccgatcg
      301 ggacgaggac ctcggccgcc ttcccggctt cccggtaccg cacgagcgtt tcgcgggccc
      361 gcatgtgctc ctcgagggag atgcggatga tctcttgctg ctgggccagc gtctcgatct
      421 gcgcccgata ttgatcgagg accgcgatcc cccgtcggag ttccgtctct ccggcgctca
      481 cgcgcgggcc tccagcgcgt accggacagc gtgatcttcg acctggtccg ccgggacttc
      541 cgcgacggtg gcgatcgcga tgtacttgcg cggcacgccg tgctggctcc cgagcaccga
      601 gaggagcttc tcgcgagcca ccacctcgtc ggccgccgcg agctctttcg agaaaggctg
      661 ccaccgacga cccatgcgga agcggccgct aatccgaaac gccttcatgg gacggcgtgc
      721 aagggaccgc tctacttaag aacttgctcg ggtcaacgga cctgcgccat cgtggcgcgg
      781 aagtgttcga gcaactcctc ggcgaccttg cgtgtgacgc ccttcacggc catgagggac
      841 ttgggcgtcg ccttcgcaaa atcctctggg ctgtcaaagc ccgcgtcgac caacgccttc
      901 gcgcgcgccc gtccgattcc tttcacgtgc acgagttcat cgaggaggtc cgggccttcg
      961 gctttcgcgg cctcgagatc gaggatccgt cgctggatcc cttcgtcccc ggggctcagc
     1021 ttgagggctt ccgtgaaggc gcgttgcgcg tcgtcatcac gccccatctt gacgaggact
     1081 tccccttgcg ccgcccacgc ctcctcgtcg ttcgggtaga gctgcgtcaa ccggtcgaac
     1141 gagtcgaggg cgtcctccaa atccccttgc tccaacagga tgttcccgcg gttcaggagg
     1201 gcggacgagt ttccgggctg caccccgagc accaggtcga ggcagttgag cgcttcctgc
     1261 ggcttcccgc tcctacgata ggccaccgcc ttgccgatga gcgcgttccc gttgctcggc
     1321 tcgacctcca ggatgtcgtc gaacagattc agggccgccg tgtagttccc gctcgcgctc
     1381 gcaatcaagg cgcggctcag caagcccggc acatcgacgc ggacctcttc gatcttctga
     1441 cgcaggttcg cgtcgctcgg atcgacggtc gccgcggcct cgtacgcggc cagcgcctcc
     1501 ggccgcctcc cgaggttcgt gagggcgtcg cctttcatct cgagcgctgc agcctcgttc
     1561 ggccgaagcc gcaggaggtc ctcgaccgac tccagacact cccgccaatg acgctgctcc
     1621 atgtggaggc gggccaccgc gcggagcgag tcgacgttcc gccggtccct cgcgaggatc
     1681 cgccgatacg tctccagcgc ttccgcgtgt tgattcagcc gttcctggca ccgggccttg
     1741 ccctgaaggg ccgggacgta gtcgccatcg agccgcagcg cttccacgaa tccgacgagg
     1801 gcggcttcgt agtttcccgt cgcgacgagc gccgccgctt tccggaccaa ggtttcggcg
     1861 gtctcgggtt cccggatggg tgctcgaggc atgggccgcg gcagcggagg cgttcgcgtt
     1921 tggataggag gcatcgatgc ttggatcacc ggtgtgggca ccgggggcgg tgggggcgtc
     1981 gagtgggccg gcggtggcgg ctcgacgaag ctcgatttca tcggcacggg gcgggccgtc
     2041 ggcggcgcgt ccgggatgga ggccgacgga tcgtacaccc gttcgccgga atcgatttcg
     2101 ccagcggaac gaaggctcgt cgctttcgtt cggtcgcgga tcggtcggag gacgaaccac
     2161 cagccgatct gggtggcccc atacaggaac acgagggctg ggacggtgga gaacaacgtc
     2221 gggatgatgc ctttctgaag gtcgaacgtc agcaatgtcg aaacgtttcg aaggttcagg
     2281 aacacaaggg accagctcgc gtactcggcc cacatcgttg gttcgatact caggaccacc
     2341 cgctgccccg tcgtaagcgc ttgcgatgca ccaaccg
//
LOCUS       DATLMA010000262         1306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_628257, whole genome shotgun sequence.
ACCESSION   DATLMA010000262 DATLMA010000000
VERSION     DATLMA010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628257"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..595)
                     /locus_tag="VNA10_03280"
     CDS             complement(23..595)
                     /locus_tag="VNA10_03280"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36732.1"
                     /translation="MRVRDATVADRDAIVRIARASFDRLYAFFAVRGTRHAWPFLVAE
                     DGSSIVGFLEGILFRGAPPIGYVYFVAVDPQARGKGSGRALVEESVRLFRSRGADRVF
                     AAVPRDNDPSMHLFDSLGFERVARRVLWRWYRWRGLSVQMRMLLAPHEVLLVRTFTDL
                     PPASPQEVPRPRDRGELVHARLDHRRLCGL"
     gene            complement(582..860)
                     /locus_tag="VNA10_03285"
     CDS             complement(582..860)
                     /locus_tag="VNA10_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36733.1"
                     /translation="MGRTIPTYRLHLESILNDWMDYRRALREKDREVFDRLLNKSRQH
                     SSAASYCAHLDPSILAILSILLEMERDIETLKRERSSAADDSGPRAGS"
     gene            complement(952..>1306)
                     /locus_tag="VNA10_03290"
     CDS             complement(952..>1306)
                     /locus_tag="VNA10_03290"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HVG36734.1"
                     /translation="VDEPPEVLRKVLDAVPDLQYCLDVGHAHLDNRTDGARTYMAALA
                     DRLGLVHMHDNHGGHGETGDEHLPFGKGTIDLERDVKALKARGYEGPVTLEIFKGIPD
                     DRRACLRKMRRWTKE"
BASE COUNT          236 a          426 c          433 g          211 t
ORIGIN      
        1 ccagaggacg atcgagtcgc ggtcatagtc cgcataggcg tcgatgatcc agccgtgcgt
       61 gaacgagctc cccgcgatca cgaggcctgg ggacctcttg aggcgacgcg ggagggaggt
      121 cggtgaaagt gcgcacgagg aggacctcat ggggagccaa gagcatccgc atctgcacgg
      181 agagcccgcg ccagcgatac caccgccaca ggacccgacg ggcgactcgc tcgaatccga
      241 gggagtcgaa caggtgcatc gagggatcgt tgtccctcgg cacggcggca aacacccgat
      301 cggctccgcg agaccggaag agccggaccg attcttcgac gagcgctcgt cccgagccct
      361 tcccgcgcgc ctgtggatcc acggcgacga agtacacgta cccgatcggc ggcgccccgc
      421 ggaaaaggat cccttcgagg aagcccacga tcgacgatcc gtcctcggcc acgaggaagg
      481 gccaggcgtg gcgcgtcccg cggaccgcga agaacgcata caggcggtcg aacgaggcac
      541 gggcgatccg cacgatggcg tcgcggtcgg cgacggtcgc gtcacgaacc cgcacggggc
      601 ccggaatcgt ctgcggccga agaacgttcc cgtttcagcg tctcgatgtc ccgttccatc
      661 tccaggagga tcgagaggat cgccaggatg ctcgggtcga ggtgggcgca gtagctcgcg
      721 gcgctcgagt gctgccgcga cttgttcagc aggcggtcga atacctcgcg gtccttctcc
      781 cgcaacgcac gccgatagtc catccagtcg ttcaagatcg attcgaggtg caaacggtac
      841 gtcgggatgg tgcggcccaa ggtctcgatg caccagccct tcgaaggtaa gtagccgtcg
      901 gccggaggga tggccgaaac tactcgctcg gatggcagat aatcttccga gttactcctt
      961 cgtccaccgg cgcatcttcc ggaggcacgc gcgccggtcg tccggaatcc ctttgaaaat
     1021 ctcgagagtc accgggccct cgtatccgcg ggccttcagc gccttcacgt cccgctcgag
     1081 gtcgatcgtg cctttcccga agggcaggtg ctcgtcgccg gtctccccgt gcccaccgtg
     1141 gttgtcgtgc atgtgcacga gtccgaggcg gtccgccagc gccgccatgt acgtgcgtgc
     1201 gccgtccgtg cgattgtcga gatgcgcatg accgacatcg aggcagtatt ggaggtccgg
     1261 caccgcatcg aggacttttc gcaggacctc cggaggctcg tcgacg
//
LOCUS       DATLMA010000263         2918 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_24773, whole genome shotgun sequence.
ACCESSION   DATLMA010000263 DATLMA010000000
VERSION     DATLMA010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24773"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VNA10_03295"
     CDS             <1..195
                     /locus_tag="VNA10_03295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36735.1"
                     /translation="LMDRIRKFLWLSSGLFSAAAVAVPAVGVMVYGTFEGGGTSFLAA
                     VISACLFGVTTLLKFGPDEA"
     gene            245..763
                     /locus_tag="VNA10_03300"
     CDS             245..763
                     /locus_tag="VNA10_03300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36736.1"
                     /translation="MDRDVWIRGVMVLSILVLATLIFVTPTLIGRQPAELASLPLLIV
                     GMPRNESYFIIYLSAAVQAYRYEEVRIVVTGTNPSANRTVAENESYGLHVLVPTQVPS
                     NGSVTIHTYLVDQAKNYFEYNVTVRAELDSGRTVMVFTFPDEKDNPNLEMKRYPPGED
                     LRWVIPQRGALP"
     gene            760..1098
                     /locus_tag="VNA10_03305"
     CDS             760..1098
                     /locus_tag="VNA10_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36737.1"
                     /translation="MRISRWTILWLGIVVVLVSVEIGVLTGYITPAGVISSFLTLVVG
                     LVVISVFAFIGAIFLGMFVSHRILSGKGFTPFEQEMLRMRQDLRDLNDRIEQIATRLG
                     VSLGDRKKEP"
     gene            complement(1095..1691)
                     /gene="cas4"
                     /locus_tag="VNA10_03310"
     CDS             complement(1095..1691)
                     /gene="cas4"
                     /locus_tag="VNA10_03310"
                     /inference="COORDINATES: protein motif:HMM:NF014040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HVG36738.1"
                     /translation="MAAAVIATAAVSFSGVVNQSLAQGFVALALLWLIGASFFLYRSI
                     GALQIARTTRDRYAVRGDLVYIDSAAEKPKLFVSKKHGLSGRPDAVVMDGENHIPVEL
                     KTGRVPRGPLFSHILQVAAYCFLLEEEYGKPPPYGIIRYGETSFEIEYNEDQKKLVLQ
                     KLAEMRTAITKGGAHRNHNRPGKCIHCSRRSGCPERLA"
     gene            complement(1933..>2918)
                     /locus_tag="VNA10_03315"
     CDS             complement(1933..>2918)
                     /locus_tag="VNA10_03315"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HVG36739.1"
                     /translation="NRGWSVIVDDADLARLLRNVFETDFDPRRPDSIAASEPSLVPPP
                     PTPPVVPWSPGPPSAPRPARIVLAPDTTLDPEGILGLFASAKVRLSIDAFYLDETWGH
                     TPSPFLEAAFAAARRGVSVRILLDGSWASVEADSGTNDDALERINRRATDERLPLEVR
                     LLKPRGSIERLHNKGAIVDGRAVLVSSMNWALGSATENREVGLIVDDPVLARTFEISF
                     DADWEGRPTSGLDAWRLEDPLALVALYALVGVASALSLRKLRPRNKDIKPGARVRTRA
                     SLGAHLRGRYREVRLLPAQLVAQSGPRAGRRSGARRGRSEARGRVRGPERD"
BASE COUNT          491 a          950 c          958 g          519 t
ORIGIN      
        1 ctgatggacc gcattcgaaa attcttgtgg ctctcgagcg gactgttcag tgccgcggcc
       61 gtcgccgttc cagcggtcgg cgtgatggtc tacgggacct tcgaaggtgg cggcacgagc
      121 ttcttggccg cggtgatcag cgcgtgcctg ttcggcgtca cgaccctcct gaaattcggg
      181 cccgacgagg cgtgagttca ggtcgcccga cgaacgttta tgcaggcccg ctccatggcc
      241 acgcgtggac cgggacgtgt ggatccgcgg cgtcatggtc ctctcgatcc tcgtcctcgc
      301 gaccctgatc ttcgtgacgc cgaccctcat cgggcggcag cccgccgagc tcgcgtcgtt
      361 acccctcctc atcgtcggga tgccgagaaa cgaatcgtat ttcatcatct atctcagtgc
      421 cgcggtgcag gcctaccggt acgaggaggt gcgtatcgtc gtgacgggga ccaatccttc
      481 agcgaaccgc accgtcgccg aaaacgagag ctacggcctt cacgtgctcg tgccgacgca
      541 ggtgccctcg aacgggagtg tcacgattca cacctacctg gtcgatcaag cgaagaacta
      601 ctttgagtac aacgtcacgg tccgcgccga gttggactcg ggccggacgg tgatggtctt
      661 cacgttcccg gacgagaagg acaacccgaa cctcgagatg aaacggtacc cgccgggaga
      721 agacctccgg tgggtcatcc cgcagcgggg ggcgctcccg tgaggatttc ccgctggacg
      781 atcttgtggc tcggcatcgt cgtcgtgctc gtgtccgtcg agatcggcgt cctcaccggt
      841 tacatcaccc cggccggcgt gatttcctca ttcttgacgt tggtcgtggg cctcgttgtc
      901 atttcggtct tcgcattcat cggcgcgatt ttcctcggga tgttcgtgtc ccaccgcatc
      961 ctctccggga aaggcttcac ccccttcgaa caagagatgc tgcggatgcg gcaggacctt
     1021 cgcgacctga acgatcgcat cgagcaaatc gcgacgcgcc tcggcgtgtc cctcggcgat
     1081 cgcaagaagg agccctaagc gaggcgctcc gggcatccgc tccggcggga gcagtggatg
     1141 catttgcccg ggcgattgtg gttccggtgg gccccgccct tcgtgatcgc ggtccgcatc
     1201 tccgcgagct tctggaggac gagcttcttc tggtcctcgt tgtactcgat ctcgaacgag
     1261 gtctcgccgt agcggatgat gccatacggc ggcggcttcc catactcctc ctcgagcagg
     1321 aagcaatacg ccgcgacttg caggatgtga gagaacagag gtccgcgtgg cacgcgaccc
     1381 gtcttgagct cgaccgggat gtggttctcc ccgtccatca cgacggcgtc cggccgcccc
     1441 gacaggccgt gtttcttcga cacgaacaac ttcggcttct ccgcggccga gtcgatgtag
     1501 acgaggtcgc cccggacggc gtagcggtcg cgggtcgttc gcgcgatctg gagcgcgccg
     1561 atcgagcggt acaggaagaa cgaggcgccg atcagccaca ggagggcgag cgccacgaag
     1621 ccctgcgcga ggctctgatt cacgacgccg ctgaaggaga ccgccgcggt cgcgatcacg
     1681 gcggccgcca tcgcgaaacc caggatcacc cgttcggaga ggagcctctc ggcctccgtc
     1741 gcgagcgtct ccgcgcggta caggaaatat accgccgcga ggagccagat gagggcgatc
     1801 gccccgaggg tgtacgagac ctggacgctc tcggacgata ggaattgcac cccgacgatc
     1861 gcgacgatcg acgcggcgat cgcgaagtac agcacgccgg tctccgcctc gcgggccttc
     1921 gcctcgtgga cctcaatccc tttcaggtcc gcggacgcgg cctcgtgctt cgcttcgccc
     1981 tcggcgagct ccggaccttc ttccggcgcg aggccccgac tgagccacca gctgagcggg
     2041 cagtagccga acttctcgat atcggccgcg gagatgagct ccgagggagg cacgcgttcg
     2101 cacccgcgcg ccgggcttta tgtctttgtt cctcggtctc aattttcgaa gggagagggc
     2161 cgatgcgacg ccgaccagcg catacagtgc gacgagggcg agcgggtcct cgagacgcca
     2221 cgcatcgagg cctgaggtcg gccgcccttc ccaatccgcg tcgaacgaga tctcgaatgt
     2281 cctcgcgagg accggatcgt ccacgatgag gccgacctcg cgattctccg tcgccgagcc
     2341 gagcgcccag ttcatgctcg agacaagcac cgcgcggcca tccacgatcg cgcccttgtt
     2401 gtggagccgt tcgatcgagc cgcgaggctt caggagtcgg acctcgagag ggagacgttc
     2461 gtctgtcgcg cgacgattga tacgctccag ggcgtcgtcg ttcgtccccg agtcggcctc
     2521 gaccgaagcc cagctcccgt cgaggagaat ccgcacggac acgccgcgac gcgcggccgc
     2581 gaaggcggct tcgaggaatg gactcggggt gtgtccccac gtctcgtcga ggtagaaggc
     2641 gtcgatcgag agtcgcacct tcgcggaggc gaacaggccg aggattccct ccgggtcgag
     2701 cgtcgtgtcc ggcgccagga cgatccgcgc aggtcggggg gcggagggcg gcccgggaga
     2761 ccacgggacg accggaggag tgggcggcgg aggcacgagt gacggttcgc ttgcggcaat
     2821 cgaatccggt cgtcgcggat cgaagtcggt ctcgaatacg tttcggagaa gccgagcgag
     2881 atccgcatcg tccacgatca cggaccagcc gcggttgc
//
LOCUS       DATLMA010000264         1594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_628451, whole genome shotgun sequence.
ACCESSION   DATLMA010000264 DATLMA010000000
VERSION     DATLMA010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628451"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VNA10_03320"
     CDS             complement(<1..359)
                     /locus_tag="VNA10_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018193983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6114 domain-containing protein"
                     /protein_id="HVG36740.1"
                     /translation="MIRVAEYKEGKGTSEKPTAAFVLSLIAAIFILLNGALIAALGAI
                     LFAFFPGFGILIAALGLVFGIVVLVGAILLWSKPAMHVGAGVLVLLFSIFSLIIGGGF
                     IIGFILGLIGGNLGIVW"
     gene            462..608
                     /locus_tag="VNA10_03325"
     CDS             462..608
                     /locus_tag="VNA10_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5679 domain-containing protein"
                     /protein_id="HVG36741.1"
                     /translation="MVQGYCVKCREKREIKGAVAVKLKNGKPAMKGKCPVCGTTMMRI
                     GAAK"
     gene            717..>1594
                     /locus_tag="VNA10_03330"
     CDS             717..>1594
                     /locus_tag="VNA10_03330"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36742.1"
                     /translation="MTPPGPKAKEIIERDRSYIATTTKSAPVVVKRASGSIVEDVDGN
                     ILIDFAAGISVLNVGHAHPKVVEAISRQASQFTHFAGTDFYYEIQATLAERLGKITPG
                     KHRKKVFFGNSGTEANEAAIKIAKSHTKRQMFLAFLGAFHGRTQGALSLTASKAKQRA
                     GFFPTMPGVVHVPYAYCYRCPYKLTYPSCDLYCANIIEDVYMKTVAPPEDLAGVFVEP
                     VQGEGGYIVPPPGWMDRIAKIAKDHGVLLIDDEVQSGLGRTGKMWAIEHSDAVPDILT
                     MAKSLGGGLPIGAAVYP"
BASE COUNT          364 a          487 c          479 g          264 t
ORIGIN      
        1 ttccagacga ttcccagatt cccgccgata aggccgagga tgaacccgat gatgaatcca
       61 ccaccgataa tcaggctgaa gatcgagaac aataggacga ggacacctgc gcccacgtgc
      121 atcgccggct tcgaccacag caagatcgca ccgacgagca cgacgatgcc gaacacgagt
      181 ccaagggcgg caatcaagat cccgaatcct gggaagaacg cgaagaggat tgcccctaat
      241 gcggcgatca aagcaccgtt cagaaggatg aatatcgcgg caatcaatga caggacaaac
      301 gctgcagttg gcttctcgct cgtaccctta ccctccttat attcggcgac tcgtatcaaa
      361 ggaccattat aaaagtattt tgcaaccgaa ccgaggatcg tgaaatagtg agaccgcacc
      421 ttttatcagg ggtcacccct tgcacccgcg gtgattcccc catggtgcaa ggttattgcg
      481 tgaagtgccg tgagaagcgg gagatcaaag gcgccgtcgc ggtgaaattg aaaaacggca
      541 agcccgcgat gaagggcaag tgtcctgtgt gcggcacgac gatgatgcga atcggagctg
      601 cgaagtaagc cggaatgtcg gcggcccgct ccggcggatt ctgggcgacg agactattaa
      661 tacgcccaga ccgtaagcgg acccggggtg caacggtgaa ggttcccgac atcaaagtga
      721 cccccccggg cccgaaggcg aaggagatca tcgagcggga ccgtagctac attgcaacca
      781 ccacgaagtc ggccccggtc gtcgtcaaac gagcctccgg ctcgatcgtc gaagacgtcg
      841 atggcaacat cctgatcgat ttcgcggcgg gcatttcggt gctcaacgtg ggtcacgccc
      901 atccgaaggt cgtcgaggcg atctcccgcc aggcatcgca gttcacccat ttcgccggga
      961 ccgacttcta ctacgaaatc caagcgaccc tcgccgagcg actgggcaag atcaccccgg
     1021 gcaaacatcg gaagaaggtc ttcttcggca actccggcac ggaggcgaac gaggccgcga
     1081 tcaagatcgc gaagagccac acgaagcggc agatgttcct cgcgttcctc ggcgcgttcc
     1141 acggccggac ccaaggcgcg ctgtcgctga ccgcgagcaa ggcgaagcaa cgcgccggat
     1201 tcttccccac gatgcccggc gtcgtgcacg tgccctacgc gtattgctat cgctgtccgt
     1261 acaagctcac gtatccgtcc tgcgacctgt attgcgcgaa catcatcgag gacgtctaca
     1321 tgaagacggt cgcgccgccc gaggacctcg cgggcgtctt cgtcgagccc gtccaaggcg
     1381 aaggcgggta catcgtgccg cccccgggat ggatggatcg gattgcgaag atcgcgaagg
     1441 accacggcgt gctcctgatt gacgacgagg tccagtcggg cctcggccgg accggaaaga
     1501 tgtgggcgat cgagcactcg gacgccgtcc cggacatcct gacgatggcc aagtccctgg
     1561 gcggcgggct gccgatcggt gccgcggtgt atcc
//
LOCUS       DATLMA010000265         1289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_751781, whole genome shotgun sequence.
ACCESSION   DATLMA010000265 DATLMA010000000
VERSION     DATLMA010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751781"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VNA10_03335"
     CDS             <1..591
                     /locus_tag="VNA10_03335"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HVG36743.1"
                     /translation="KYEWNFVDANDKAAALTTDQIDTENAERFGITFTDEAGVKRHPL
                     ILHLSPSGAVERVLYALLEKAAAVTKAGRTPMLPLWLAPTQVRIVPVGGDQLEYARSL
                     LDRLPDVRADLDDSDDTLAKKIRTAEKEWIPYIVVVGKKELESGNLNVRVRETKEQTE
                     MSVDALRKQVVAKTKGLPFRPLAEPALLSARPIFRG"
     gene            666..>1289
                     /locus_tag="VNA10_03340"
     CDS             666..>1289
                     /locus_tag="VNA10_03340"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HVG36744.1"
                     /translation="MAFLKREHVELLIGIGVLALGLGLLVFTFSHALAIATAPGEFFR
                     GQMPQQTPTGPSASFTWDTNGATLTTVQDTSRQGDVAITSWNWNFGDGTRVSGQNPGS
                     HTYANASVYQVSLIVRDSNGKESRAVAQVQTVPMQPRSGDSLGDPTAGLQLNLDFGGI
                     LQPVAITFLTFGMYVVLAMVGGAVTRAGWNMIKPKPETIRVRLKPKQL"
BASE COUNT          248 a          425 c          413 g          203 t
ORIGIN      
        1 aagtacgaat ggaacttcgt ggacgcgaac gacaaagcgg cggcgctgac gacggaccag
       61 atcgacaccg agaatgcgga acgcttcggc atcacgttca cggacgaagc cggggtgaaa
      121 cgccacccgc taatcctgca cctgtctccg agcggggcgg tcgaacgcgt actctacgct
      181 ctcctggaga aggccgccgc ggtgacgaag gccggccgga cgccgatgct tccgctgtgg
      241 ctcgcgccga cccaggtccg catcgtcccc gtgggcggcg accagctgga gtacgcgcga
      301 tccctgctcg accgcctccc ggacgtgcga gccgacctcg acgactccga cgacacgctc
      361 gcgaagaaaa tccggaccgc ggagaaggaa tggattcctt acatcgtcgt agtcgggaag
      421 aaagagctcg agagcgggaa cctgaacgtc cgggtgcggg agacgaagga gcagacggag
      481 atgtccgtcg atgcccttcg aaaacaggtt gtcgccaaga cgaagggcct cccgttccgg
      541 ccgctcgcgg aaccggcgct cctcagcgcg aggcctattt tccgaggata gcgggtattc
      601 tcttttctcg gacctgagaa ccgaggcgcc cggctttatg gacctcgcct ccatcgagcg
      661 cccggatggc cttcctcaaa cgggagcacg tcgagttgct gatcggaatc ggcgtcctcg
      721 ccctcggcct gggcctgctc gtgttcacgt tctcccacgc cctggccatc gcgacggctc
      781 cgggcgaatt cttccgcggc cagatgccgc agcagacccc cacaggcccc agcgcgtcgt
      841 tcacctggga tacgaacggc gccaccttga cgaccgtgca ggacacctcc cgccaaggcg
      901 atgtcgcgat cacgtcatgg aactggaatt tcggggacgg gacccgcgtc tcgggccaga
      961 atcccggctc ccacacgtac gcgaatgcaa gcgtctacca ggtcagcctg attgtgcgcg
     1021 acagcaacgg gaaggagagc cgggccgtgg cgcaggtcca gaccgtgccg atgcagccac
     1081 gatcgggtga cagcctcggc gacccgacgg caggccttca gctcaacctc gatttcggcg
     1141 gcattcttca accggtcgcc atcacgttcc tgacgttcgg gatgtacgtc gtgctcgcga
     1201 tggtcggcgg cgcggtgacg cgggccggct ggaacatgat caagccgaaa ccggaaacga
     1261 ttcgcgtgcg cctgaagccg aagcagttg
//
LOCUS       DATLMA010000266         1251 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_752041, whole genome shotgun sequence.
ACCESSION   DATLMA010000266 DATLMA010000000
VERSION     DATLMA010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752041"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1248)
                     /locus_tag="VNA10_03345"
     CDS             complement(<1..1248)
                     /locus_tag="VNA10_03345"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HVG36745.1"
                     /translation="MLWRENKIIVSTPQVIRNDLRAERISLDDVSLIVFDEAHRAVGD
                     YAYVDVAAAYKDVPDRLVLGMTASPGSSAEKILEVCGNLGITAVEIRTEYDPDVVPYQ
                     HDLQIERIPVEAPEVSKEIRKLLQTVVDEQVARLKKLGFLAGKARVTRKDLLAVGNEA
                     RSRLDSGVKDGRLYGAMTAQAIAMKADHAIELAETQGLGSLRLYFENMEKDTKTKADV
                     QFLKHAKVQAAIQLAEATEVEHPKLAKTGWVVRRQLMEKADSKIIVFAHYRQTADRIT
                     QDLARIPSVRPMRFVGQASRGEDIGLSQKQQVDILDKFRAGAVNVLVATSIGEEGLDI
                     PQVDLVVFYEPVPSEIRTIQRRGRTGRSAAGRVVTLVTKDTRDEAYLYSARRKERKMH
                     VELDRLRKDLKQKIFVGEPGGETF"
BASE COUNT          180 a          425 c          391 g          255 t
ORIGIN      
        1 gaacgtctcg cctcccggtt cgccgacgaa gatcttctgc ttcaagtcct tgcggaggcg
       61 gtcgagctcc acgtgcatct tccgttcctt ccgtcgggcg ctgtacagat acgcctcgtc
      121 ccgcgtgtcc ttcgtcacca acgtcacgac ccggcccgcg gcgctgcgtc cggtccggcc
      181 gcgccgctga atcgtccgga tctcggacgg cacgggctcg tagaacacga cgaggtcgac
      241 ctgtgggatg tcgaggccct cttccccgat cgaggtggcg acgaggacgt tgaccgcgcc
      301 tgcgcggaac ttgtcgagga tgtcgacctg ctgcttctgc gaaagcccga tgtcctcgcc
      361 gcgggacgcc tggcccacga accgcatcgg cctgacgctc gggatccggg cgaggtcctg
      421 ggtgatccgg tccgcggtct gtcggtaatg cgcgaagacg atgatcttgg agtccgcctt
      481 ctccatgagt tgtctccgga cgacccagcc ggtcttcgcg agcttcgggt gctcgacctc
      541 cgtcgcctcc gcgagctgaa tcgccgcttg gaccttcgcg tgcttcagga actggacgtc
      601 cgccttcgtc ttcgtgtcct tctccatgtt ctcgaaatac aaccggaggg agccgaggcc
      661 ttgcgtctcc gcgagttcga tggcgtggtc cgctttcatc gcgatggcct gggcggtcat
      721 cgcgccgtag agccggccgt ccttcacgcc ggaatccaac cgcgagcggg cttcgtttcc
      781 gaccgccagc aggtccttgc gggtcaccct cgccttgccc gcgaggaacc cgagtttctt
      841 gagtcgcgcg acctgttcat cgaccacggt ctggagaagc ttccggatct ccttggagac
      901 ctcgggggcc tccaccggga ttcgctcgat ctgcagatcg tgttgatacg gcacgacgtc
      961 ggggtcgtac tcggttcgga tctcgaccgc ggtgatgccg aggttcccgc acacctcgag
     1021 gatcttctcc gcggaggacc ccggagacgc cgtcatcccg aggaccaacc gatccgggac
     1081 gtccttgtac gcggccgcga cgtcgacgta ggcatagtcg ccgaccgcgc gatgcgcctc
     1141 gtcgaagacg atcaggctca cgtcgtcgag ggagatgcgt tccgcccgca ggtcgttccg
     1201 gatcacctgg ggcgtcgaca cgatgatttt gttctccctc cagagcagtt c
//
LOCUS       DATLMA010000267         2485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_390311, whole genome shotgun sequence.
ACCESSION   DATLMA010000267 DATLMA010000000
VERSION     DATLMA010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390311"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VNA10_03350"
     CDS             complement(<1..407)
                     /locus_tag="VNA10_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36746.1"
                     /translation="MRNIFVFFDLGGTLVDLRGIVASMAARLSAIRVRGPVPLALRWA
                     VATAEALPVAQGPRFRSEREIASDVLFDLLAKRSRADARDSSVRLVREAWSGYVGSCS
                     LQPDITIAWLRALRSKVSGLGVVTDGDTGAVADV"
     gene            505..1659
                     /locus_tag="VNA10_03355"
     CDS             505..1659
                     /locus_tag="VNA10_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36747.1"
                     /translation="MASLPSWLIVYLIEILKAAPLASATAWFVLAILQVYRDRWHTWT
                     EAFFLFCCFFAGLYAIGDFLLFYSTTYEAARLSTLVSLTGLTLAVNFFLLFTLVYVDR
                     MRRSYLLLMAVSISMLLLLWGRGILDISPLTFEQQTLFVATFDPIVFGVYLIYVVAYA
                     VIGIWNLYRLYKIVRASSTTLARRAAGLMVTFTLVLILGLVTNGFIGVAQVAIPPPLS
                     TLLLFVAASAYYTLYPIGRERISEAIRMFQARRYSIKAVFLTFHDGTLIGAKTKPGET
                     AIDQDLFGATLDVIQNFMRTSFPILRGKSLSSIVHGTYTLVIEKARMTYLTVVLEGEE
                     TDQLRRQMRDVLIAFEVQNRPVLQKWKGVPSEATGTEQLLTGFFVESPLV"
     gene            complement(1656..>2485)
                     /locus_tag="VNA10_03360"
     CDS             complement(1656..>2485)
                     /locus_tag="VNA10_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36748.1"
                     /translation="WNVLSHSLGLGVDSDKAFQGLRDLVMYDIPDGTRSTLSVPVTGD
                     VDADAGLYCLALVHTLASLGARTNVIMTHTVYNRDRGPEETKRFLEILLKGIDPFREY
                     ARRHGLAIHLEGIREGYELAQDFNRAFPMPSHPKFDAHFLLDYEEEWFLSPEGRALLE
                     VLPPIDVVVRHTKLGISGGWIPLRMRKAAYVYSQNGTVHSNWNFNEYAAMVAVTYLAK
                     LLHEGEALSKTYASIDEIKARYRDREIRLRQKIVRLSPKPRKLFVVGSPVGLIQVYA"
BASE COUNT          447 a          780 c          756 g          502 t
ORIGIN      
        1 acatcggcaa ccgcgccggt atctccatcc gtcaccaccc cgagaccgga gaccttcgat
       61 cgaagcgccc gcaaccaggc gatcgtgatg tcgggctgga ggctgcagga tcccacgtaa
      121 ccggaccatg cctcccggac gagcctgacg gacgagtcgc gtgcgtcggc gcggcttcgt
      181 ttcgcgagca gatcaaacag aacatcggac gcgatctctc gctcggatcg gaaccggggt
      241 ccttgcgcga cgggcagggc ttcggccgtc gccacggccc aacgaagcgc gaggggcacg
      301 ggccctcgta cccggatcgc gctcaagcgc gccgccattg acgcgacaat gcctcggagg
      361 tcgacgaggg tgccgccgag atcaaagaac acgaagatgt tgcgcattcg gatttgaccc
      421 cttccggcgg atttgcgccg tcgatttcgg agtggtcggg tatttatttg ccattcttta
      481 tatctctgtg gacacaacgg tcacatggca tccctgccct cttggctgat cgtctaccta
      541 atcgagatcc tgaaggcggc tccgctcgcg tcggcgacgg cgtggttcgt cctggcgatc
      601 ttgcaggtgt accgcgatcg ctggcacacc tggacagaag cgttcttcct cttttgctgt
      661 ttcttcgccg gactctacgc aatcggcgat ttcctcttgt tctactcgac cacgtacgag
      721 gcggcccgcc tctcgacgct ggtgagcctc accggcctta cactggcggt gaatttcttc
      781 ctgctcttca cgctcgtgta tgtggaccgc atgaggcgat cctaccttct actcatggcg
      841 gtgtccatct cgatgctcct gctcctctgg ggacgaggca tcctcgacat ctctccgctc
      901 accttcgagc agcaaacgct gttcgtggcg acgttcgacc ccatcgtctt tggcgtgtat
      961 ctcatctacg tcgttgcgta cgcggtcatc ggcatttgga acttgtatcg gctctacaag
     1021 atcgtccggg cgagcagcac gacgctggcg cgtcgcgcgg ccggtctcat ggtgaccttt
     1081 accctcgtcc tcatcctcgg cctcgtgacg aacggcttca ttggggtcgc tcaagtggcg
     1141 atcccacccc ctctctccac cctgctgttg ttcgtcgcgg cgagcgccta ctatacgctc
     1201 tacccaatcg gccgggagcg aatatcggaa gcgatccgga tgtttcaggc ccgccggtat
     1261 tcgatcaagg cggtcttttt gacatttcat gatggcacgt tgattggcgc gaagaccaag
     1321 ccgggcgaga ccgcaatcga ccaagacctc ttcggggcga ccctcgatgt catccagaat
     1381 ttcatgcgga cctcgttccc gatcctccgt gggaagtcgc tcagctcgat cgtccacggg
     1441 acctacacgt tggtcatcga aaaggcccgg atgacgtacc tgaccgtcgt cctcgagggg
     1501 gaggagacgg atcagctacg ccggcagatg cgagacgtcc tcatcgcgtt tgaggtgcaa
     1561 aaccggcccg tgctccagaa atggaagggc gtgccgagcg aggcgacagg gacggagcaa
     1621 ctcctcacgg gatttttcgt cgaatccccg ctcgtctagg cgtacacctg gatgagaccg
     1681 accggcgagc cgacgacgaa gagcttgcgg ggcttcggcg agaggcggac gatcttctga
     1741 cgaagccgga tctcgcggtc gcgataccgg gccttgatct cgtcgattga cgcgtacgtc
     1801 ttcgagaggg cctcgccctc atggaggagc ttcgcgagat acgtaaccgc gaccatcgcg
     1861 gcgtactcgt tgaaattcca attgctatgc accgtgccgt tctgcgagta cacataagcg
     1921 gccttgcgca tccgcagcgg aatccatccg ccggagatac cgagcttcgt gtgccgcacg
     1981 acgacatcga tcggcggcag gacttcgagc agggcgcggc cctcgggaga gaggaaccac
     2041 tcctcctcgt agtccaacag gaaatgcgcg tcgaacttcg ggtgagaggg catcgggaac
     2101 gcacgattga aatcctgtgc cagctcgtag ccctcgcgga ttccctccag atggatcgcc
     2161 aatccatggc ggcgtgcgta ctcgcggaac ggatcgatac ccttcaggag aatctcgagg
     2221 aaccgtttcg tttcctcggg accgcggtcg cggttgtaca cggtgtgcgt catgatcacg
     2281 ttcgtccgcg cgccgaggct cgcgagcgtg tggacgaggg cgaggcagta caggcccgcg
     2341 tccgcatcga cgtcgccggt caccgggacg gagagggtcg accgggtgcc gtcggggatg
     2401 tcgtacatga cgaggtcccg cagcccctgg aacgccttgt ccgagtcgac gccgagccca
     2461 agggaatggg agaggacgtt ccatt
//
LOCUS       DATLMA010000268         1880 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_326873, whole genome shotgun sequence.
ACCESSION   DATLMA010000268 DATLMA010000000
VERSION     DATLMA010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326873"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VNA10_03365"
     CDS             complement(<1..268)
                     /locus_tag="VNA10_03365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HVG36749.1"
                     /translation="MAAQPFESRTSVTTCDTQGIVQEYAADAAELFGWTQDEAIGKMS
                     VAMFHVPKNVPTLVPRLLREAVEKGKFEEEVVLMRKDGSTFRAVL"
     gene            complement(295..645)
                     /locus_tag="VNA10_03370"
     CDS             complement(295..645)
                     /locus_tag="VNA10_03370"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HVG36750.1"
                     /translation="MAQKPFKAQTSVITCDMQGIVQEYAADAGELFGWSPAEVIGKLS
                     VATFHLPENVPTLVPRLLKEAVENGKFEEEVTLRRKDGDVFRAVLTVRPVFRGGKQVG
                     YMGMTHPLEPPRRP"
     gene            715..1401
                     /locus_tag="VNA10_03375"
     CDS             715..1401
                     /locus_tag="VNA10_03375"
                     /inference="COORDINATES: protein motif:HMM:NF016432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG36751.1"
                     /translation="MKRLELTVPTSLLDDLEILSDRFFRHNRSVQVLQSFSVRPQTNA
                     LIVRVHRKGPFKDEATVRREARAIARRYRVARFELLSTDRTHGEYVAWIEWHLPERLR
                     GLLGEEWSGAVPLEVAAVGPGEARVVLLASEKVLPALSRFLDDVEAPYRVRAMKSASL
                     EAWQPLASLTQRQRDLLELAYHLGYYATPAKASLRQIAGLVGITRAAVSKHLRAAERK
                     IFAAALGANR"
     gene            1558..>1880
                     /locus_tag="VNA10_03380"
     CDS             1558..>1880
                     /locus_tag="VNA10_03380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36752.1"
                     /translation="MARGYRRKRFYSTANRILAHLSATASHEPASLSGLTQEGIAAAT
                     HSGRTTATKWLARMESSGVVVGERAHVPGHRVRKTVYRLTHEGWIQAMKLRGRLHSDI
                     VEVLAP"
BASE COUNT          322 a          618 c          592 g          348 t
ORIGIN      
        1 tgagcaccgc gcgaaaagtg gaaccgtcct tccgcatgag gacgacttcc tcctcgaact
       61 tgcccttctc gacggcctcc cgaaggaggc gcgggacgag cgtcgggacg ttcttcggca
      121 catggaacat cgcgacggac atcttgccga tggcctcgtc ttgcgtccat ccgaatagct
      181 cggccgcgtc cgcggcatat tcctgcacga tgccttgcgt gtcgcaggtg gtgaccgagg
      241 tcctcgactc gaagggctgt gcggccattg cgaattacgc ccctgaaacg ggtctcaagg
      301 tcggcggggc ggctccaggg gatgcgtcat ccccatgtag ccgacttgct tcccgcctcg
      361 aaacaccgga cgaacggtga gcacggcgcg gaagacatcg ccgtcctttc ggcggagggt
      421 gacctcttcc tcgaacttcc cgttctcgac ggcttccttc aggagccgcg gaacgagggt
      481 gggcacgttc tccgggagat ggaacgtcgc gacgctcaac ttcccgatga cctcggcggg
      541 cgaccacccg aacagctcgc cggcgtccgc cgcgtactct tgcacgatcc cttgcatgtc
      601 acacgtgatg acggacgtct gcgccttgaa gggcttctgg gccatgggtc tctccaagaa
      661 gtcgaggggc cacatgtata agcgagttct ggtttacctg tcaaccatac cccgatgaag
      721 cggctcgagc tcaccgtgcc cacgtccctc ctcgacgacc tcgagatcct gagcgatcgc
      781 ttcttccgcc acaatcggtc cgtccaggtc cttcagtcgt tttccgttcg cccgcagacg
      841 aacgccctga tcgtccgcgt ccatcggaag ggccccttca aggacgaggc aacggttcgg
      901 cgggaagccc gcgcgatcgc acgtcggtac cgggttgccc ggttcgaact cctgtcgacg
      961 gaccggacgc acggagaata cgtcgcctgg atcgagtggc acctccccga acgacttcgg
     1021 ggcctcctcg gggaggagtg gtccggagcg gtgccgctcg aggtcgccgc ggtcggtccc
     1081 ggcgaggcac gcgtggtcct cctggcctcc gagaaggtgc tccccgcgtt gagccgattc
     1141 ctcgacgacg tggaggctcc ctatcgggtc cgcgcgatga agagcgcgtc gctggaggct
     1201 tggcaaccgc tcgcgtctct gacccaacgc caacgagatc tcctcgagct ggcgtatcac
     1261 ctgggctact atgcgactcc cgcgaaggca agcttgcgcc agatcgccgg cctggtcggg
     1321 atcacgcgcg cggccgtatc caagcacctc cgagccgcgg agcggaaaat ctttgccgcg
     1381 gcgttgggcg cgaatcgctg acggtggtca cggagccgag cttctccggt cgagcgcgtt
     1441 tggttcctgc gccgggaggg attccgtctc atcgtgagta tcaacttcga gaaggaatcg
     1501 ctcgaagaaa tgttccgact tccatattct taagtggact tcgcccaatc ccttcgcgtg
     1561 gccagggggt accggcggaa gcgcttttac tccacggcca accgaattct agcccatctc
     1621 tcggcgacgg catctcatga gcctgcgagc ctcagcggtc tcacccagga aggaattgcc
     1681 gccgcgacgc actccgggcg gacgacggcg acgaagtggc tcgcgcgcat ggaatcgtcc
     1741 ggggtcgtgg tcggtgaacg ggcgcatgtc ccgggacatc gggtgcgaaa gaccgtttat
     1801 cggctcacgc acgaaggatg gatccaggcc atgaagctcc gcggacgcct ccactcggac
     1861 atcgtggagg tcctggcacc
//
LOCUS       DATLMA010000269         1067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_814791, whole genome shotgun sequence.
ACCESSION   DATLMA010000269 DATLMA010000000
VERSION     DATLMA010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814791"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            434..796
                     /locus_tag="VNA10_03385"
     CDS             434..796
                     /locus_tag="VNA10_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008084130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18e"
                     /protein_id="HVG36753.1"
                     /translation="MAKTPKTNPHLQRVVQQLRDVSREADAPIWRDVAERLERTRKNW
                     SEVNLSRLSRYAQKGEQIVVPGIVLATGEITTPLTVAAFRTSSAAQKKIEAAGGRAIS
                     LLELAVQNPKGSGVRVMG"
     gene            799..>1067
                     /gene="rplM"
                     /locus_tag="VNA10_03390"
     CDS             799..>1067
                     /gene="rplM"
                     /locus_tag="VNA10_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012781.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HVG36754.1"
                     /translation="MPTIDATGHVVGRLASILAKRLLNGEEIVIVNAEKAIVTGKRSV
                     VFNEYRARHQRGSTTSRMRGIGPNYPRRPDLILRRTISRMMPYQQP"
BASE COUNT          211 a          358 c          323 g          175 t
ORIGIN      
        1 taggtcctga cctcgcacac ggtccacgtg acgaccgaga acatcagcat cacgggggcc
       61 acgaactgct ggacctcgac gaccgggaac ggggaggacg tcccgggagg atccgtcttc
      121 accaccacat ggaggctccc ctaccacgcg ggtgccttcg acccgccgtc ttgtaccgtc
      181 cagagcgtct cgctcgggac acccgggttc gccctctctt ctgcgaacgt cccccttaca
      241 gtcctcgacg gaggaaatca gaccctcacg cttcgagtcg tcgctccgaa tagcgattac
      301 actggaacgc tctcgatcat cctcgctgta acttccccat gaaaatcgag tcgaccgggc
      361 ctcgccaacg tgctcacgcc ccaaacgttt aaatcgctca ggtcttttgg cgtgcgtccg
      421 aggccccgtt ttcatggcca agactcctaa aacgaaccct cacctccagc gagtcgtcca
      481 gcagctccga gacgtttccc gcgaggcgga cgcgccgatc tggcgggatg tcgcggagcg
      541 cctcgagcgg acgcgcaaga actggtcgga ggtcaacctc tcccgcctga gccggtacgc
      601 gcagaagggc gagcaaatcg tcgtgcccgg gatcgtcttg gcgaccggcg aaatcacgac
      661 gccgctcacc gtcgcggcgt tccggacgtc cagcgcggcc cagaagaaga tcgaagccgc
      721 gggaggtcgc gccatcagcc tcctcgaact cgcggtgcag aacccgaaag gatccggcgt
      781 ccgggtcatg gggtgacgat gccgacgatc gatgcgacgg gtcacgtcgt gggccgattg
      841 gcatcgatcc tcgcgaagcg actcctcaat ggagaagaga ttgtcatcgt gaatgccgag
      901 aaggcgatcg tgacgggaaa gcggagcgtc gtgttcaacg agtaccgggc ccgccaccag
      961 cgcggcagca cgacgagtcg gatgcgcggg atcgggccca actatccgcg ccggccggac
     1021 ttgatcctgc gaaggacgat ttcccgcatg atgccctatc agcagcc
//
LOCUS       DATLMA010000270         2177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_508263, whole genome shotgun sequence.
ACCESSION   DATLMA010000270 DATLMA010000000
VERSION     DATLMA010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508263"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VNA10_03395"
     CDS             complement(<1..853)
                     /locus_tag="VNA10_03395"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HVG36755.1"
                     /translation="MPRQAAPDVKIVHFADPWCWWSWGLEPVLQRLREVYGDRLQIEY
                     RMGGMCKDLDAWMKEYAVDEASTVKWVRESMALFKNALDPEYLRKSGVRSTYPACLAF
                     KAAQVQDDHKAEKFLRRMMEAFQVQGSSGTERSLLRLGRSVGLDRARLARGLHSRDVE
                     AAFDEDRRMMERSRANFLTLVVSAGGKTEAKSEVFTSGPFEEVIDRLRPGLPKRAPTD
                     ILEYLEKHGDLTPVHEVAEVFRIGEDDADRRLVGLERAGILDRFEWAGAPFWTARKLA
                     LDKLPLEV"
     gene            1035..1670
                     /locus_tag="VNA10_03400"
     CDS             1035..1670
                     /locus_tag="VNA10_03400"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HVG36756.1"
                     /translation="MPEPKWKLKVEQLMACNCNWGCPCSFDAPPTYGRCETALAYRIA
                     KGSYGGVALDGLKFILVAAWPKAIHLGHGRGVLFLDAQATGLKREALEAIATAKAGGP
                     MNIYMSMMTEPPEVRTARIEFRFIGKRSRFRIGNRVRVEFEPMRNPVTGEDHFLIGKL
                     PTGLFTKSEEFFSAKNFRVALNGFQFDYPGRNAILATSTWRGRKPVERPHA"
     gene            complement(1706..>2177)
                     /locus_tag="VNA10_03405"
     CDS             complement(1706..>2177)
                     /locus_tag="VNA10_03405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36757.1"
                     /translation="RRGLFVPLANSVCVLFRVMKRFRASLPDVYAWCTEFRDSDPELS
                     RVRLRTRKVIRREGDLVEMEETGIMAFPFVARFLVRLWPPDGWEADARSNMGHTHHTY
                     RLFPESEKGTRLEMTFDVHLRGPYRLFAPFARGFIVRRTSREWDDYVRAMETGR"
BASE COUNT          431 a          720 c          649 g          377 t
ORIGIN      
        1 cgacttccag aggaagcttg tccagcgcaa gctttcgggc cgtccagaaa ggcgcgcccg
       61 cccattcaaa tcgatccagg atgccggccc tctccagacc aacgaggcgt cgatccgcgt
      121 cgtcctcgcc gatccggaac acctccgcga cctcgtggac gggcgtgagg tctccgtgct
      181 tctccaggta ctcgaggatg tcggtggggg cccgcttcgg gaggccgggc cggaggcggt
      241 cgatcacctc ctcgaacggc cccgacgtga acacctcgct cttcgcctcg gtcttccctc
      301 cggccgacac gacgagcgtg aggaagttgg ctcgcgacct ctccatcatc cggcgatcct
      361 cgtcgaaggc cgcctcgacg tcccgggagt ggagacctct ggcgagccga gcccgatcga
      421 gtccgaccga ccgcccaagc cggagtaggg accgctcggt tcccgacgag ccttggacct
      481 ggaacgcctc catcatgcga cgcaagaact tctccgcctt gtggtcgtcc tgaacctgtg
      541 cggctttgaa ggcgaggcag gccggatagg tgctccggac cccgctcttc cggaggtact
      601 ccggatcgag cgcatttttg aacaacgcca tggactcccg gacccactta accgtggagg
      661 cctcgtcgac ggcatactct ttcatccacg cgtcgagatc cttacacatc ccgcccatgc
      721 ggtattcgat ctggaggcga tctccgtaga cctcccgcaa ccgctggagg accggttcca
      781 gcccccagct ccaccagcac cacggatcgg cgaaatggac tatcttcaca tcaggtgcgg
      841 cttgtcgtgg catcgggaaa cctcacaacg aacgatatcg agccggatcc tcggatggag
      901 tggatgttct cgcgtggcat catcctcggg ggctaaaagc gttctgcggc gttggcggac
      961 agcgagtgct cgagttggtc gatccgggag acaaagcatc ttgacgcgac acgcccatgc
     1021 gcgccgagat cgcgatgccc gaaccgaaat ggaaattgaa ggtcgagcaa ctcatggcgt
     1081 gcaactgcaa ctggggatgc ccctgctcct tcgacgcacc tcccacctac ggcaggtgcg
     1141 agacggccct cgcctaccgc atcgcgaagg gcagctacgg cggcgtagcg ctcgacggat
     1201 tgaaattcat cctcgtcgcc gcgtggccga aggcgatcca cctgggacac ggccgtgggg
     1261 tccttttcct tgatgcacaa gcgaccggat tgaagcggga ggcgctcgag gcgatcgcca
     1321 ctgcgaaggc cggaggaccc atgaacatct acatgtccat gatgacggag ccgccggagg
     1381 tccggacggc gcgcatcgaa ttccggttca tcggcaaacg gagccggttc cgcatcggga
     1441 accgggtccg cgtggaattc gaaccgatgc gaaatcccgt gaccggcgag gaccacttcc
     1501 tgataggcaa actcccgacg ggattgttca caaagagcga ggagttcttc tcggcgaaga
     1561 atttccgcgt cgctttgaac ggattccagt tcgactaccc aggacgaaac gcgatcctcg
     1621 ccacctcgac ctggcggggc cggaaacccg tggagaggcc acacgcctga ggccggtccc
     1681 gacagcgaag gattccggtt tcgaactatc gacccgtctc cattgcacgc acgtaatcgt
     1741 cccactcccg cgaggtcctc cggacgatga accctcgcgc gaacggggcg aacaaccggt
     1801 aaggccccct caggtggacg tcgaacgtca tttcgagccg agtgcccttc tctgactccg
     1861 ggaacaaccg gtacgtatgg tgcgtgtgcc ccatgttcga gcgggcgtcg gcttcccaac
     1921 cgtccggcgg ccacaatcgt acgaggaacc gcgcgacgaa tgggaacgcc atgattccgg
     1981 tctcttccat ctcgaccagg tctccctccc gacggatcac cttgcgtgtg cgcagccgga
     2041 ctcgactcaa ttcggggtca ctgtcccgaa attccgtgca ccaggcgtag acatccggaa
     2101 gagaggctcg aaaccgcttc atcactcgaa agagcacaca aaccgaattc gccaggggca
     2161 caaaaaggcc tcggcga
//
LOCUS       DATLMA010000271         1141 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_752443, whole genome shotgun sequence.
ACCESSION   DATLMA010000271 DATLMA010000000
VERSION     DATLMA010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752443"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..479)
                     /locus_tag="VNA10_03410"
     CDS             complement(48..479)
                     /locus_tag="VNA10_03410"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HVG36758.1"
                     /translation="MVLYARDIVETEFLSMPPNRSVLDAAKAMAARRHGFVIVMSPEG
                     TPIGIVTEWDVLAKVVAVGRDPPEVRLQDIMTRTLVSVDANEGIDQVAKLMAQDGTRR
                     VLVTKDGKMLGVIRVQTILARMRDYIDSISAQIARSQLPIF"
     gene            559..891
                     /locus_tag="VNA10_03415"
     CDS             559..891
                     /locus_tag="VNA10_03415"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HVG36759.1"
                     /translation="MTGYPDFIRKLPEAETSLRGVTLWLLQGRSGSATLFQAREDSSV
                     PEHSHGAQWGIVVEGEMRLTIDKATRTCRRGDEYFVPAGVPHSASFRAGFRAIDFFDD
                     PNRYRPRT"
BASE COUNT          199 a          371 c          360 g          211 t
ORIGIN      
        1 tcgagaaacc tcgccgcccg caccgcgaat cgagcgtttc gcgcggatta gaagatcggg
       61 agttgagacc gcgcgatctg ggcgctgatc gagtcgatgt agtcgcgcat gcgcgccagg
      121 atggtctgga cccggatcac gccgagcatc ttcccgtcct tcgtcacaag gacccgtcgg
      181 gtcccgtctt gcgccatgag tttcgccacc tggtcgatgc cctcgtttgc atcgaccgat
      241 accagggtcc gggtcatgat gtcttggagt cgcacttcgg gcggatcgcg gccgaccgcg
      301 acgactttcg cgaggacgtc ccattccgtc acaatcccga tcggcgtccc ctcgggcgac
      361 atgacgatta cgaaaccgtg gcgccgcgcg gccatcgcct tcgcggcgtc gaggaccgaa
      421 cggttcggcg gcatcgagag gaattccgtc tcgacgatgt ctcgcgcgta taggaccatc
      481 tgtccatctt aacggcgtgg cccgtcatag cctttgctcg gccgcgacct tcaaaccgcc
      541 cagatcgttc ccccacccat gacgggatac ccggacttca tccgaaaatt gccggaggcc
      601 gagacgtcgt tgcgtggcgt gacgctgtgg ttgcttcaag ggcggagcgg ttccgcgacc
      661 ctgttccagg ctcgagagga ttcatcggtc ccggagcaca gccatggcgc gcagtggggg
      721 atcgtcgtgg agggcgagat gcgtctcacg attgacaagg ccacccggac gtgtcgccgc
      781 ggcgacgaat actttgtgcc cgccggcgtc cctcactccg cctccttcag ggcgggcttt
      841 cgtgcgattg acttcttcga cgatccgaat cgataccggc cgaggacgtg agtcgcccgc
      901 agcccgagtg acgtccgggt ccgcgtcggt ccttttgtca actcgccgcc gcgaccaaat
      961 ctattaatac gattcagggc ggtcacagca tgtcagacaa aggtccgact gaccttgcta
     1021 gggatgggaa tgggactact ccgatggctc ctctggcccc ggcgcgccag ggacgaggag
     1081 gaggacgaac cgccccgcag gcggcggaac accaagacac gggtccggtc gcacacgccg
     1141 g
//
LOCUS       DATLMA010000272         4288 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_147331, whole genome shotgun sequence.
ACCESSION   DATLMA010000272 DATLMA010000000
VERSION     DATLMA010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4288
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147331"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1248)
                     /locus_tag="VNA10_03420"
     CDS             complement(<1..1248)
                     /locus_tag="VNA10_03420"
                     /inference="COORDINATES: protein motif:HMM:NF024573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG36760.1"
                     /translation="MFLKEIQMENFKSFGRKITVPFLQGFTAITGPNGSGKSNIADAI
                     LFVLGPKSSKAIRAGKLTDLIWNGGKDKKGADSCQVSLLFDNSDRQIPVEADEVKLTR
                     YVGLSPSVDGGYNSYFYINDRKSSLSEFDSLLAHARISAEGYNLVQQGDVQKIVSMSS
                     IERRRVLDNIAGITKFDDDIAQAEGKRRETEENLERIRIILEEIDKQIRQLEADRDGA
                     LKYKELNGRMSTAKAQLAYKNRELIERQIVGTKEQIAKHEADKAKLQSQKAELRTLFD
                     AAVARLNELEQEMAERGGEEAKQLKEKLDGLRIERARATDGIETSKEVLKQLRVETGE
                     ANRDQAKIQKETDALAREREKVDARVAELDEQIKAADKDLHDVDELASKSDAKVLGIQ
                     KQIIALNNEIDQIEERVKGIVLEG"
     gene            complement(1409..2392)
                     /locus_tag="VNA10_03425"
     CDS             complement(1409..2392)
                     /locus_tag="VNA10_03425"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HVG36761.1"
                     /translation="MGTTRVAFVSSGESPFIERDRAILRSAFVVHNVSWRGKRSLVPL
                     ASAVARSDVTFSWFALDHAYAACRIARVLRRKSLVVVGGVDAANRSDLSYGVFLKPRM
                     ARRTRYAIAESDRVLIVDDNLRAEIIRNSGVRRGDIITVPLGFDTEVLRPDGGPKTTV
                     LTVAFVTDSTVAVKGLLTFAEAARLLPDLPFVLVGAGENAATERLRQAAPPNLSIVGP
                     LFGDRLLEQFRRARVYVQVSRSEAFGSALAEAMACGCIPIGTRVGGIPNVIGDTGFFV
                     PIGDAAATAAAIRQAYGSEDGARARTRIIEEFPLERRRRALVEIVRRVAEK"
     gene            2536..3492
                     /locus_tag="VNA10_03430"
     CDS             2536..3492
                     /locus_tag="VNA10_03430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG36762.1"
                     /translation="MRVGLYTGHIYSDGQIGTGTSKYAYYLLQELRRLGVEVVQLRKG
                     DNPADVDVIHDPQVPWSAPLFPRRPLVVTIQDLAPITYPEYTTGWIRWLFTTKLRWFV
                     RRASRIIVPSRRTSKVLADSLRPQQPVDLIYHGVEERFVPSREPPADPPYLAQVGVHR
                     RIKQPEVTLRAFEAIAARIPHELHFIGQPNPIVEALRREVEANAVLASRVRFYWPGED
                     RIPSVYSRSSLVVHPCPEEGFGFVPLEALASGAHVLARAPAVREILGPYGCYFDDAQS
                     LPGKILECLSNGPPGTLADRSAHARQFTFRRMAEQTIATYER"
     gene            3731..>4288
                     /locus_tag="VNA10_03435"
     CDS             3731..>4288
                     /locus_tag="VNA10_03435"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HVG36763.1"
                     /translation="MADETVELGIYRYGIYEAGTIRVLRGCLRPEDVFVDIGASVGLM
                     SLVASRLVGPRGRVFAFEPQEASFAFLTRNLVRNGAANVTPLRLAVGSTKGTLPLYAR
                     PRARGMATMVPGRDDGDPSAIVEVTAIDDFVREQGIDRCRMLKVDVEGMDLEVLRGAQ
                     GLLSRPGAPIICIEYSHGHPIAGGVP"
BASE COUNT          705 a         1378 c         1309 g          896 t
ORIGIN      
        1 cccttcgagg acgatgccct tgacgcgctc ctcgatctgg tcgatctcgt tgttcagcgc
       61 gatgatctgt ttctggatcc cgaggacctt cgcgtcgctc ttcgaggcga gctcgtccac
      121 gtcgtggagg tccttgtccg ccgccttgat ctgctcgtcc agttcggcca cgcgcgcgtc
      181 gaccttttcg cgctcgcgcg ccagggcgtc cgtctccttc tggatcttcg cctggtcccg
      241 gttcgcttcc ccggtctcga cacgcagctg tttcaggacc tccttcgacg tctcgatccc
      301 gtccgttgcg cgtgcgcgct cgatgcggag tccgtccaac ttctctttga gctgcttggc
      361 ctcctctccg ccccgctccg ccatctcctg ctcaagctcg ttcaggcgcg ccacggcggc
      421 gtcgaacagc gtgcggagtt ccgccttctg cgattgcagc ttcgctttgt cggcttcgtg
      481 cttcgcgatc tgctccttcg tcccgacgat ctgccgctcg atcagttcgc ggttcttgta
      541 cgcgagctgc gccttcgcgg tcgacatccg cccgttcagt tctttgtact tcagcgcgcc
      601 gtcgcggtcc gcctcgagct gtcggatctg tttgtcgatc tcctcgagga tgatccggat
      661 gcgctcgagg ttctcctccg tctcgcggcg cttgccctcc gcctgcgcga tgtcgtcgtc
      721 gaacttcgtg atccccgcga tgttgtcgag gacccgccgg cgttcgatgg aggacatcga
      781 gacgatcttc tggacgtccc cctgttgcac gaggttgtat ccctccgccg agatccgggc
      841 gtgggccagc agcgagtcga actccgagag cgaggacttc cggtcgttga tgtagaagta
      901 cgaattgtaa ccgccgtcca cggacgggct caggccgacg taccgcgtga gcttgacctc
      961 gtccgcctcg acgggaatct ggcggtccga gttgtcgaac agcaggctga cctgacacga
     1021 gtcggcgcct ttcttgtcct tcccgccgtt ccatatgagg tccgtgagct tgccggcccg
     1081 gatcgccttc gagctcttcg gtccgaggac gaacaggatc gcatccgcga tgttgctctt
     1141 gcccgagccg ttcggacccg tgatcgccgt gaacccctgg aggaagggga ccgtgatctt
     1201 tcgcccgaac gacttgaagt tctccatctg gatttctttc agaaacaagg tactcacctt
     1261 ggtgggggaa ggtcagccct gggggaatct gccactaccc atcccatcta tatctctctg
     1321 gcgtccgacg agggtcagac gcggacgcgg aacgtggtca tggctataaa agagtagcgg
     1381 gctagacagc ggcgcgttga caaaggcgtc atttctccgc gacccgccgc acgatttcaa
     1441 cgagagcccg ccgtctccgt tcgagaggga attcttcgat gattcgagtc cgcgctcttg
     1501 ccccatcttc ggacccgtac gcctgtcgga tcgcggccgc ggtggcggca gcgtcgccga
     1561 tcggcacgaa gaaaccggta tcgccgatca cgttcgggat cccgccgaca cgggtcccaa
     1621 tggggatgca gccgcatgcc atggcttctg cgagtgcact gccaaacgcc tcggaacgag
     1681 acacctggac gtacacccgc gcccggcgga actgttcgag aagccggtcc ccgaagaggg
     1741 ggccgactat cgataggttt ggcggggccg cctgccgcag ccgttccgtc gcggcgtttt
     1801 cgccggcccc gacgaggacg aacgggagat cgggaaggag tctcgcggcc tccgcgaacg
     1861 tgagcaaccc cttcaccgcc acggtcgagt cggtcacaaa cgcgactgtg aggaccgtgg
     1921 tcttgggacc cccgtccggc cggagtacct cggtgtcgaa cccgagcgga accgtgatga
     1981 tatcacccct tcgaacaccg gaattgcgaa tgatctccgc tcgaaggttg tcatccacga
     2041 tgagtacacg gtctgactcg gcaatcgcgt accgggttcg ccgcgccatt cggggtttga
     2101 ggaaaacccc ataactcagg tcggagcggt tcgcggcgtc aaccccgccg acaacgacga
     2161 ggctcttgcg tcgaagaacc ctcgcaatcc ggcacgcggc atatgcatgg tcgagggcaa
     2221 accacgagaa cgtcacgtcg ctcctggcga cggccgaggc gaggggcacg aggctccgtt
     2281 tcccacgcca gctcacgttg tggacgacga aggccgagcg gaggattgca cgatcccgtt
     2341 caatgaaggg agattccccg cttgaaacga aggcaactcg ggttgtcccc atcggtcagc
     2401 tcgcgcaggg gctcagctgt cataagactt cggtaactcg ggtgcgtgcg ccttccgacg
     2461 ttggaccgcg gagctttata cgggtgcgtg ggtcgggacc gattggccgg ggaactcttc
     2521 tccaggggag accgcgtgag ggtcggcttg tacacggggc acatctactc ggacgggcag
     2581 atcggaaccg gcacgtcgaa gtatgcgtac tatttgctcc aggagctccg gcgtcttggc
     2641 gtggaggtag ttcaactccg gaaaggtgac aatccggccg acgtagacgt cattcacgat
     2701 cctcaagttc cgtggagcgc cccgctcttc cccaggcgcc ctctcgttgt cacgatccag
     2761 gacctcgctc cgatcaccta ccccgaatat acgaccggat ggatccgatg gttgtttaca
     2821 acgaaactga gatggttcgt tcgaagggcc tcgcgtatca tcgtaccgag tcggcgcacc
     2881 tcgaaagtcc ttgcagattc actccgcccg cagcaaccgg tggatctcat ttaccacggc
     2941 gtcgaagagc gattcgtgcc ttcacgagag ccgcccgccg accccccgta tctcgcccaa
     3001 gtcggggtcc accgacggat caagcaaccg gaggtgactc tccgcgcttt cgaggcgatc
     3061 gcggcgcgaa tcccccacga acttcatttc attggtcagc cgaatcccat tgtggaagcg
     3121 ttgaggcgtg aggtcgaggc gaatgccgtc ctggcgagcc gcgttcggtt ctactggccg
     3181 ggagaagatc gtattccctc agtctacagt cgatcgtccc tcgtcgttca cccgtgtccg
     3241 gaggaaggct tcggatttgt ccccctcgag gccctcgcct cgggcgccca cgttctcgca
     3301 cgcgcgcctg ccgtccggga aatcctcgga ccctacggtt gctacttcga cgacgcgcag
     3361 tcgcttcccg gcaagattct cgagtgcctt tcgaatggac ctccgggaac cctggccgac
     3421 cgatccgccc atgcacgaca attcacgttc cgacggatgg cggagcaaac catcgcaacg
     3481 tacgagaggt gactctatga gccagattgc cggtgcctca ggtcgtacgc ccaagcggtc
     3541 ttccactctg aatccgagtt ccctccgcgt ggctcaaggg atcgctcgat ccgtgggccg
     3601 tttcctcttg tcccatccgt ttgtggggag cgacttcctc cggctgagga ttggcgaacg
     3661 attcatccca tcggcccgtg atcccgcggt ggtacgcacc gtgttgggtt gtcgcgtcga
     3721 ggtggatccg atggcggacg agaccgtcga attggggatc taccgctacg ggatctacga
     3781 agccgggacg attcgagtcc tgcgtggctg tcttcgaccg gaggacgtct tcgtggacat
     3841 aggtgcgagc gtaggcctca tgtccctggt tgcctcgcga ctcgtcgggc ctcgcggtcg
     3901 tgtcttcgcg ttcgagcccc aggaggcttc gttcgcgttt ctgacccgaa atttggtgcg
     3961 gaacggcgca gccaatgtca cgccgttgcg gttggcggtt ggatccacga aagggaccct
     4021 tcctttgtat gcccgtcccc gcgcccgcgg gatggccacg atggtgcccg gccgagacga
     4081 cggcgaccct tcggcgatcg tcgaggtgac cgcgattgat gacttcgtcc gggagcaagg
     4141 gattgatcgt tgccgcatgt tgaaggtcga tgtcgagggc atggatctcg aggtgctccg
     4201 aggcgctcaa ggtctccttt cacggccagg cgccccgatt atttgcatcg aatacagcca
     4261 cggacatccg attgcggggg gtgtccca
//
LOCUS       DATLMA010000273         1450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_327533, whole genome shotgun sequence.
ACCESSION   DATLMA010000273 DATLMA010000000
VERSION     DATLMA010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327533"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VNA10_03440"
     CDS             <1..578
                     /locus_tag="VNA10_03440"
                     /inference="COORDINATES: protein motif:HMM:NF036828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36764.1"
                     /translation="EESTVLEEPFTPHFDPDFFRKYVAYAKRIYPVMTDEAMEIIEKK
                     YLEIRKTGEAAGSSVPITPRQLEAIIRLSEAGARLRLSETVGAEDAERAVRIVEYWMG
                     KVAGEEGRFDIDIIQTGISQSQREQIISIRDIINELAGPEGVADYEDIVRIAQERGIP
                     PAKVDAWLKRWAQEGEIYSPAKNKYKLVERL"
     gene            593..889
                     /locus_tag="VNA10_03445"
     CDS             593..889
                     /locus_tag="VNA10_03445"
                     /inference="COORDINATES: protein motif:HMM:NF016157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF424 family protein"
                     /protein_id="HVG36765.1"
                     /translation="MPIRMKVYHQGKETLVAAADADLIGKTFREGKFKIEVGRFYEGD
                     VVSEERFIAELRQATIGNFVGRETIEAAKDAGFVSDDGILWISGVPHAQFVLMM"
     gene            complement(849..>1450)
                     /locus_tag="VNA10_03450"
     CDS             complement(849..>1450)
                     /locus_tag="VNA10_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36766.1"
                     /translation="WSMAKAKPRSWWRMRQIRHRDAVALAVLSASLLLAGELANQDIQ
                     GVYHQYIVPSGALNNPGLLILVVALVILGFTTYFGGVFVLLGGLHFSWGRVSRGRFLV
                     GLGIGVSLIGLLSRLAQAVLVVGTPLAAIVPYTTSLTGLGILCGFVSHTLMAQYAILL
                     KKHAKRVWRRWRKAQPDADDTPRARPSTSSRRTARGARR"
BASE COUNT          312 a          431 c          484 g          223 t
ORIGIN      
        1 tcgaagagtc gacggtcctg gaggaaccct tcacgcccca cttcgatccg gatttcttcc
       61 gcaagtacgt ggcctatgcg aagcggatct atcccgtgat gacggacgag gccatggaga
      121 tcatcgagaa gaaatatctg gagatccgga agaccggcga ggccgcgggc tccagcgtcc
      181 cgatcacccc gcgccagctc gaggcgatca tccggctttc cgaggccggt gctcggctcc
      241 ggctgagcga gacggtcggg gcggaggacg cggagcgtgc cgttcgaatc gtcgaatact
      301 ggatgggcaa ggtggccggc gaggaaggcc gtttcgacat cgacatcatc cagaccggga
      361 tcagtcagtc gcagcgcgag cagatcatct cgatccgcga catcatcaac gagctcgcgg
      421 gtcccgaagg cgtcgcggac tacgaggaca tcgtccggat cgcgcaggag cgaggcatcc
      481 cgcccgcgaa agtggacgcg tggttgaaac gctgggccca agaaggcgag atctacagcc
      541 ccgcgaaaaa caagtataag ctcgtcgaac ggttgtagcc gggacccggc cgatgcctat
      601 ccgcatgaag gtgtatcacc aggggaaaga gaccctcgtc gcggcggcgg acgcggacct
      661 gatcggcaag acgttccgcg aaggcaagtt caagatcgag gtcggtcgct tttacgaggg
      721 cgacgtcgtc agcgaggagc gcttcatcgc ggagctccga caggcgacga ttggaaactt
      781 cgtcggccgc gagacgatcg aggccgcgaa agacgccggc ttcgtctcgg acgacgggat
      841 cctctggatc agcggcgtgc cccacgcgca gttcgtcttg atgatgtaga ggggcgcgcg
      901 cgaggcgtgt catcggcgtc cggctgcgct tttcgccaac gtcgccatac gcgcttggcg
      961 tgtttcttca gcaaaatggc gtactgagcc atcagggtgt ggctcacgaa cccgcacagg
     1021 atccccagtc cggttagcga agtcgtatag gggacgatgg cggccagagg agtgccgact
     1081 accaagaccg cctgggcgag acggctcagc agtccgatga ggctgacccc gatcccgagg
     1141 ccgaccaaga aacgccctcg actcacccgg ccccaggaga agtgaaggcc gccaaggaga
     1201 acgaagactc cgccgaaata cgtcgtgaaa ccgagaatga ccagggcgac gacaagaatc
     1261 agtaagccgg gattgttcag ggcgcccgac gggacgatgt attggtggta cacgccctgg
     1321 atgtcctgat tcgcgagttc tccggcgaga agcagcgagg cggacaggac ggcgagtgcg
     1381 acggcgtcgc gatggcgaat ctgccgcatc cgccaccacg aacggggctt cgccttcgcc
     1441 atcgaccaaa
//
LOCUS       DATLMA010000274         1325 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_26019, whole genome shotgun sequence.
ACCESSION   DATLMA010000274 DATLMA010000000
VERSION     DATLMA010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26019"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..274)
                     /locus_tag="VNA10_03455"
     CDS             complement(47..274)
                     /locus_tag="VNA10_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36767.1"
                     /translation="MDASSVLLVLEEQKKWRERRKRIRDRLRQLERRRNTLRKELEGV
                     RKKILEYNRLLTDLRDRMPTRAVLPPSAPGR"
     gene            complement(322..630)
                     /locus_tag="VNA10_03460"
     CDS             complement(322..630)
                     /locus_tag="VNA10_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36768.1"
                     /translation="MAKEEKSEMTTIAKKQLEGRGYVLALSTTREGENLIGKVRVTEA
                     ATHRTVASFVSVWKIDNMELVFGIDAGEGIARDFVNQAMNLFDLFKYVLPGAQVKEEA
                     "
     gene            751..823
                     /locus_tag="VNA10_03465"
     tRNA            751..823
                     /locus_tag="VNA10_03465"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:784..786,aa:Val,seq:cac)
     gene            complement(865..>1325)
                     /locus_tag="VNA10_03470"
     CDS             complement(865..>1325)
                     /locus_tag="VNA10_03470"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HVG36769.1"
                     /translation="YAEASQNGATSADRHIAERRAIMLTLAILLPAIGVVWFFGRFIL
                     GFFAGTNSAYVDGSIGPLRILIFGSITGLLNSLLSTRVLIRKQTRPLIVSAIISSSVT
                     LGLGYVLLIWGGITGLAAATVVGSLSQIPYLYLVARRSFGSEVDQPVEAV"
BASE COUNT          231 a          426 c          404 g          264 t
ORIGIN      
        1 caccgttcgg cttccttgcg ggttgcctcc aacgcccgag tcactgtcac cgccccgggg
       61 cgctgggagg caggacggcc cgcgtcggca tgcggtcccg caggtccgtc agcaggcggt
      121 tgtattcgag gatcttcttg cggacccctt cgagctcctt gcggagggtg ttccgccttc
      181 gctcgagctg tcgaagtcgg tcgcggatcc gctttcggcg ctcccgccac ttcttctgtt
      241 cttccagaac taggagcaca cttgaggcgt ccatcgggcg cccgtcccac ggagtccaga
      301 ctatttaatc gtgatgtgcg ctcacgcttc ttccttcact tgcgcgccgg gcaggacgta
      361 tttgaaaagg tcgaacaggt tcatcgcttg gttcacgaag tcccgcgcga tcccctcgcc
      421 ggcgtcgatg ccgaacacga gctccatgtt gtcgatcttc cagacgctga cgaaactcgc
      481 gacggtccgg tgcgtcgcgg cctcggtcac gcgaactttg ccgatcaggt tctcaccttc
      541 ccgggtcgtc gagagggcga gcacgtagcc acggccctca agctgcttct tcgcgattgt
      601 cgtcatctcg gacttttctt cctttgccat cgagagcgcc tcccagcggc ccaatccggt
      661 cagcggtaat aaaagctctg cgggccggcg tggacaatcg agcgttcttc gatggggatt
      721 tataccgtgc gggcctttgc gcgctcccgc gggctcgtgg tctagcggtt atgacatcgc
      781 tctcacacag cgaaggtcac cggttcgaat ccggtcgagc ccactcctct tgccatcgat
      841 ctgactaggt ctgctgccgg acgcttagac cgcctcgacg ggctggtcca cctcggatcc
      901 aaaggacctc cgcgccacga ggtagagata tgggatctgc gacagcgatc cgacaacggt
      961 ggcagccgcc aacccggtga ttccgcccca aatcaggagg acgtacccga ggccaagcgt
     1021 caccgaactc gagatgatcg ccgagacaat cagcggccgc gtctgcttcc ggatcaggac
     1081 gcgcgtgcta aggaggctgt tcaacagccc cgtgatggag ccgaagatga ggatgcggag
     1141 agggccgatt gatccgtcca cgtacgccga attggtcccc gcgaagaagc ctaggatgaa
     1201 gcggccgaag aaccacacga cgccgatcgc cgggagaaga atcgcgagcg tcagcatgat
     1261 cgcgcgtcgc tcggcgatgt ggcggtccgc ggatgtcgcg ccgttctggg atgcctctgc
     1321 ataga
//
LOCUS       DATLMA010000275         1951 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_147560, whole genome shotgun sequence.
ACCESSION   DATLMA010000275 DATLMA010000000
VERSION     DATLMA010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147560"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VNA10_03475"
     CDS             complement(<1..407)
                     /locus_tag="VNA10_03475"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG36770.1"
                     /translation="MICLRGENEVGVESIGGTRVTRIPLRARRGGRLRYVFQYAVFFA
                     LSSLELFRIHRRNPLQIVHVHSLPDFQVFCAILLKLRGVRVILDLHEALPEIVAARFR
                     PGIGRLLVRLARAAERFSVLFADQVITVNDTIG"
     gene            complement(500..1393)
                     /locus_tag="VNA10_03480"
     CDS             complement(500..1393)
                     /locus_tag="VNA10_03480"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--dolichyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HVG36771.1"
                     /translation="MIRSLRGTTLVGKDLNKPYGPLVPEMGGIGVILGFYVGVGILAA
                     FVLKGPADSPALFFAALSACLGAGVVGLMDDMFRLRKRSKAVLPFVLALPLGAVVYSA
                     KNTVLLGLDIGILMALVVPLGVTSASNAANMLEGFNGLGAGLGIIMTASLIVLSFLTG
                     AQGGLFLLFPLLGALSAFLCFNRYPARVFPGDSMTLFTGATIACAAIISSPSLKAVGA
                     LLFIPMIIEFALKFRGHFQAENYGEIGPDGRLGWKGPVESLAHAVMRWKRLREWEIVL
                     ILWAFEAIVCLAVILTVAAVL"
     gene            1631..1762
                     /locus_tag="VNA10_03485"
     CDS             1631..1762
                     /locus_tag="VNA10_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36772.1"
                     /translation="MHADKIRTADLPSFRLEPRDAVIVVSLIGIAAYVIGFIIGLAS"
BASE COUNT          447 a          589 c          604 g          311 t
ORIGIN      
        1 tgcccaatcg tgtcgttgac cgtgatgact tgatccgcga aaagcacgct gaaacgttcc
       61 gcggctcggg cgagacggac caacaagcga ccgattcctg gacgaaatcg ggcggcgacg
      121 atctccggca aggcctcgtg aagatcgagg atcacgcgca cgccgcggag cttgagcaga
      181 atggcgcaga acacttgaaa atcaggtaag gagtggacgt ggacgatctg caggggattc
      241 cgtcgatgaa ttcggaacaa ctcgagggag gagagtgcga agaagacggc gtactgaaag
      301 acgtagcgga ggcgaccacc gcgacgcgct cgaagcggaa tccgtgtgac gcgggtccca
      361 ccgatcgatt cgactccgac ctcgttctcc ccccgaagac agatcacgtc gacttcatgt
      421 ccagcgcttc ggagtgcgtc gacctcccga cggattcgag gatcgacagg gaagtacgcg
      481 tacgctacgt ggcaaatcct catagaaccg ccgcaacggt caagatgacc gcgaggcaaa
      541 caatcgcctc aaaggcccat agaatgagga cgatttccca ctcgcgcagg cgcttccaac
      601 gcattacggc gtgggcgagc gactcgaccg gacccttcca ccccaaacgg ccatcggggc
      661 caatctcgcc gtagttctcc gcttgaaagt gaccgcgaaa cttcagcgcg aactcgatga
      721 tcatcgggat gaacaagagg gcgccaaccg ctttcagaga cggtgacgag ataatcgcgg
      781 cgcatgcgat cgtcgcaccc gtgaagagcg tcatcgagtc gccggggaac acccgggccg
      841 gatagcgatt gaagcagagg aacgcggaaa gggccccgag caggggaaag agaaggaaca
      901 ggcccccctg cgccccggtg aggaacgaga gcacgatgag cgacgcggtc atgatgatgc
      961 ccaggccggc gccgagtccg ttgaacccct cgagcatgtt cgcggcgtta ctcgcactcg
     1021 tgactcctag cggaaccact agggccatga ggatgccgat gtccagcccg agcaggaccg
     1081 tatttttggc cgagtatacg accgcgccca gcgggagggc cagtacgaac gggaggaccg
     1141 ccttcgatcg cttccgcaaa cggaacatgt cgtccatgag tccgacgaca cctgcgccga
     1201 gacaagcgct gagcgcggcg aagaacagag ccggagaatc ggccggccct tttagcacaa
     1261 aggccgccaa gattccgacg ccgacgtaga agcccaggat caccccgatc cctcccattt
     1321 ccggaaccag cgggccgtag ggtttgttga ggtctttccc gacgagggtg gttccgcgga
     1381 gcgatcgaat caaccagggg aggaagaggt acgctgcgac gaacgaaact atggctgacg
     1441 ctaccaggta tggcaaatcc attggaatgg ctcgcctgtt cctcgcgcac ggccgaatcc
     1501 gatatttggc cgttctctcg acattctgga acgtgagaac agacggtgcg cgtagacctg
     1561 tgctcgtaga cctatcatcc acgataagcg gccggaaatc ttcttaaggg ccgcgggaaa
     1621 cctctcgccg atgcacgcgg acaagattcg gacggcggat ctaccgagct tccggctcga
     1681 gccccgcgac gccgtcatcg tcgtctccct gatcgggatt gccgcgtacg tcatcgggtt
     1741 cattatcggg cttgcctcct gagactcggc cccggtaccc actaatcaat ctcgagacgc
     1801 ggcccacacc ggaaaccttc ttgaaccggg agctgagttt gggtcggcca tgacccctcg
     1861 gattcacccg accgcagagg tgtcggcaga ggccacggtc ggcgaaggaa gccgcgtctg
     1921 gcattgggca caaatccgag agagggcccg c
//
LOCUS       DATLMA010000276         2564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_448070, whole genome shotgun sequence.
ACCESSION   DATLMA010000276 DATLMA010000000
VERSION     DATLMA010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448070"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VNA10_03490"
     CDS             <1..828
                     /locus_tag="VNA10_03490"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HVG36773.1"
                     /translation="VPLAKGERFGAWAITEPEAGSDAGNLGTTARLDGNEWVLNGQKR
                     FISNGSIADYVQVYAREPGTKRHEGISLFLVPKDAPGFKVTHVETTTKLGLRASPTAD
                     LAFEDCRIPKENLIGKKGDGWDQAMRTLNSGRIGIAAGAVGVARAALEAASKYVKERK
                     AFGRPIGDFQLIREMIAQSAVEIDAARLLTLRAAHLRDLGQDNTIEVSMAKLYGAQMA
                     QRVTDWAVQVHGGYGFSGEFDVERYFRDARILGLYEGTNEIQKLIIAEHILGPSSKK"
     gene            841..1290
                     /locus_tag="VNA10_03495"
     CDS             841..1290
                     /locus_tag="VNA10_03495"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008408891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HVG36774.1"
                     /translation="MAASARDCIFCKILRREVPASLVREDSWTLAFMDIRPMNPGHVL
                     VIPKAHAANVEDLPPEAVGPILEAAKEISRAMRASGIRCEAVSFYLANGEAAGQEVFH
                     VHLHLIPRWRGDGFGLRVRPDYGRVADRAELDGFALKIRTALGRSPD"
     gene            complement(1279..1779)
                     /locus_tag="VNA10_03500"
     CDS             complement(1279..1779)
                     /locus_tag="VNA10_03500"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HVG36775.1"
                     /translation="MGEPPEDPFAPLVAVHEDFVDKLTELEATLDEMMATRETREGND
                     IILDEAVRFFEEELIPHLRLEDEAVVPPIEKAIGRYGTLVTVVMYEHEEIRRGVAKFE
                     ESREDLRRDPASWQAIQELNRHGIFLVQFLWDHFRKENTSLFPTARKVLSAEALRNVT
                     ERISVR"
     gene            complement(1819..>2564)
                     /locus_tag="VNA10_03505"
     CDS             complement(1819..>2564)
                     /locus_tag="VNA10_03505"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HVG36776.1"
                     /translation="SWQLYAEALVLAMEKIYYIGPSFRAEKSRTTRHLTEYWHAEMEQ
                     AWAGMDDVIKHAEGAIAHACQRVAEERPDDVVAMGRTPEFLKAVKPPFERMTYDDALK
                     ILKKQGAEIEWGKDLRTLEERALTEGKSKPIIVTHYPRVTQAFYKARDPKRPDLVLAF
                     DVIGGDGVGEIVGGSERETELEAIKKGLKEQGEDPKAYAWYLDSRRFGSVQHAGFGMG
                     MERLIQWICKLDHIRDAVPFPRTPARFAP"
BASE COUNT          438 a          817 c          851 g          458 t
ORIGIN      
        1 gtgcccctcg cgaaagggga gcgtttcggg gcgtgggcga tcacggaacc cgaggcgggg
       61 agcgacgcgg ggaacctggg gacgaccgcc cggctcgatg gaaacgaatg ggtgctgaat
      121 ggccagaaac ggtttatctc gaacgggagc atcgcggact acgtccaggt gtacgcgcgg
      181 gagccgggga cgaagcgcca cgaaggcatc tcgctcttcc tggtgccgaa ggatgccccg
      241 ggtttcaagg tcacccatgt cgagacgacg acgaagctcg gattaagggc gagtcccacc
      301 gcggacctgg cgttcgagga ctgccgcatc ccgaaggaga acctcatcgg caagaaaggg
      361 gacggctggg accaggccat gcggaccctg aacagcggcc ggattggcat cgcagccgga
      421 gcggtcggcg tggcccgggc cgccctcgaa gccgcgtcga agtacgtgaa agagcgcaag
      481 gcgttcggac ggccgattgg cgacttccag ttgatccggg agatgatcgc gcagtcggcg
      541 gtcgagatcg acgccgcgcg actcctcacc cttcgcgcgg cgcacttgcg ggatctcggt
      601 caagacaaca ccatcgaggt ctcgatggcc aagctctacg gagcccagat ggcccaacgg
      661 gtcacggact gggccgtcca ggtgcacggc ggatacggat tcagcggcga gttcgacgtg
      721 gagcggtatt tccgcgatgc acgcatcctc gggctgtacg agggcacgaa cgagattcag
      781 aagctgatca tcgcggagca tatcctgggg ccttcttcga agaagtgaga ggtccgaccc
      841 atggccgcct cggcccgcga ctgcatcttc tgcaagatcc tgcggcggga ggttcccgcg
      901 agcctcgtcc gcgaggattc gtggacgctg gcgttcatgg acatccgacc gatgaatccg
      961 ggccatgtgc tcgtgattcc gaaggcccat gctgcgaacg tcgaggacct gccgcccgag
     1021 gccgtcgggc cgatcctgga ggcggcgaag gaaatctccc gcgccatgcg cgcgagcggc
     1081 atccggtgcg aagcggtgag cttctacctc gcgaacggcg aggcagccgg acaggaggtg
     1141 ttccacgttc acctgcatct gatcccgcga tggcgaggcg atgggttcgg gctgcgcgtc
     1201 cgtccggatt atggccgcgt cgccgatcgc gccgagctcg acgggttcgc gttgaagatt
     1261 cggacggcgt tgggtcggtc accggactga aatccgttcc gtgacgttcc gcagcgcctc
     1321 cgcggagagg accttccggg cggtcgggaa gaggctcgtg ttctccttcc ggaaatggtc
     1381 ccagaggaac tggacaagga aaatcccgtg gcggttgagt tcctggatgg cctgccaaga
     1441 ggccgggtcg cgacgcaggt cctcccgaga ctcctcgaac ttcgcgaccc cacgccgaat
     1501 ctcctcgtgc tcgtacatca cgaccgtcac gagggtcccg taccgaccga tcgccttctc
     1561 gatggggggg acgaccgcct cgtcttcgag gcggagatgg ggaatcagtt cctcctcgaa
     1621 gaatcggacg gcctcatcga ggatgatgtc gtttccttcg cgcgtctcgc gagtggccat
     1681 catctcgtcc agcgtcgcct cgagttccgt gagtttgtcg acgaaatcct catgaaccgc
     1741 gacgagcgga gcgaacggat cctcaggtgg ctcgcccatc gctcgcaact accgcctgtc
     1801 gtgctaaaag cctgcgcctc acggcgcgaa ccgcgcgggc gtccgcggga acggcacggc
     1861 gtctcggatg tggtcgagct tgcagatcca ctggatgagg cgctccatcc ccatcccgaa
     1921 gcccgcgtgc tgcacgctgc cgaagcggcg ggagtcgaga taccaagcgt acgccttcgg
     1981 gtcctctccc tgctccttga ggcccttctt gattgcctcc agttccgtct cccgctcgct
     2041 gcctccgacg atttccccga cgccgtcgcc gccgatcacg tcgaacgcga ggacgaggtc
     2101 cggacgcttc gggtcccggg ccttatagaa ggcctgggtg actcgcggat agtgtgtcac
     2161 gatgatcggc ttcgacttgc cttccgtgag ggcccgctcc tcgagtgtgc ggaggtcctt
     2221 gccccattca atctccgccc cttgtttctt caggattttc agggcgtcgt cgtaggtcat
     2281 gcgctcgaac ggaggcttca cggccttcaa gaactccggc gtgcggccca tcgcgacgac
     2341 gtcgtccggg cgctcctccg cgacccgctg gcatgcatga gcgatggccc cctcggcgtg
     2401 cttgatcacg tcgtccatgc cggcccacgc ctgttccatc tcggcatgcc agtattccgt
     2461 caggtggcgc gtggtccggg acttctccgc gcggaacgac gggccgatgt aatagatctt
     2521 ctccatggcg aggacgaggg cctccgcata gagctgccag gact
//
LOCUS       DATLMA010000277         1010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_328109, whole genome shotgun sequence.
ACCESSION   DATLMA010000277 DATLMA010000000
VERSION     DATLMA010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328109"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..783)
                     /locus_tag="VNA10_03510"
     CDS             complement(<1..783)
                     /locus_tag="VNA10_03510"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HVG36777.1"
                     /translation="MIRSRLVQGLIVGALAVILAGKLLFHVAVDPFLWMYGVLVTLVT
                     FATFFSAYRYYKDPALDPPDPSVADLRPKVSCIVPVKNEERLIRRCVSSILGQTYDNL
                     EVIVVDDGSTDRTPAILDEFAAAHPEVRVIHLPKNVGKKKAVEAGIALTTGSIFAFAD
                     SDSVLGRHAIERLVRALNAHPNAGAVSAHGRALNADVSVLTRIQDTWYEGQFRLSKGL
                     ESVYGAVTCASGCLSAFRREAIGPYVHAWAHDTFLGEEFRFAT"
     gene            complement(780..>1010)
                     /locus_tag="VNA10_03515"
     CDS             complement(780..>1010)
                     /locus_tag="VNA10_03515"
                     /inference="COORDINATES: protein motif:HMM:NF013175.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36778.1"
                     /translation="LLKLACDENRLDFEQLRQAMNTKWNVEVLEARDGIGGTCLPKDI
                     LYLKAAAPEVCHLLDGARDVDRLYRESKEKVE"
BASE COUNT          178 a          320 c          335 g          177 t
ORIGIN      
        1 cgtcgcgaac cggaactctt ccccgaggaa cgtgtcgtgg gcccaggcgt ggacgtacgg
       61 accgatcgcc tcgcgccgaa atgccgagag gcagccggag gcgcaggtca ccgcgccgta
      121 gacgctctcc agccccttcg agagccggaa ctgtccttca taccaggtgt cctggatcct
      181 cgtgagcacg ctcacatccg cgttcaaggc cctcccgtgg gccgagacgg cgcctgcgtt
      241 cgggtgtgcg ttcagtgctc ggaccagccg ttcgatcgcg tgtcggccga ggacggagtc
      301 gctgtccgcg aaggcgaaga tcgatccggt cgtgagggcg atgccggcct cgacggcctt
      361 cttcttcccg acgttcttcg gcaggtggat gacacggacc tccgggtgag cggcggcaaa
      421 ctcgtcgagg attgcgggtg tgcggtccgt gctcccgtcg tcgacgacga tcacctcgag
      481 gttgtcgtac gtctgcccga ggatggacga aacgcaccgc cggatcaaac gttcttcgtt
      541 cttcaccggt acgatgcacg acaccttcgg ccggagatcc gcgacgctcg ggtccggagg
      601 atcgagggcc ggatccttgt agtagcggta cgcgctgaag aaggtggcaa acgtgacgag
      661 cgtcacgagc acgccgtaca tccataggaa cggatctacg gcgacgtgga agaggagctt
      721 tccggcgagg atgacggcga gcgcaccgac gatgaggccc tgcaccaggc gggagcggat
      781 cactcgactt tctccttaga ctcgcggtac aaacggtcga cgtcgcgagc gccatcgagg
      841 aggtggcaca cctcgggcgc cgccgccttc aggtacagga tgtccttcgg gagacaagtc
      901 cccccgatcc cgtcccgggc ctcgaggacc tcgacgttcc atttggtgtt catcgcctgc
      961 cggagctgct cgaagtcaag acggttctcg tcacacgcga gcttcaggag
//
LOCUS       DATLMA010000278         1076 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_448495, whole genome shotgun sequence.
ACCESSION   DATLMA010000278 DATLMA010000000
VERSION     DATLMA010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448495"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1076)
                     /locus_tag="VNA10_03520"
     CDS             complement(<1..>1076)
                     /locus_tag="VNA10_03520"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HVG36779.1"
                     /translation="DVRVNFVDAPGYGIFSPEAHAAVAAADAVLIVLDAVSGVEVQTD
                     KVWKFAAEFGRPVIFVVNRMDRDRASFDRTMESLRRKYGRGVVPLQIPVGEEKSFRGT
                     VDLVRMESHLHEGGRRVDGPIPDDLSARAHEEHEKLVEMVAEGDDTLMERFFAQGTLE
                     PGDLVPGLKKEIAARKLFPVFCTSSAQGIGVLRVLDACVALFPSPEGTKVEGIGKDGK
                     PVEVVTDEKGHAVAQVVKTVSDPFAGRISYLRVRRGHFQSDGTYWNASKSIPERFSGL
                     FLPQGKEHVNVPEARAGDIVAVAKLKETMTGDTLTVKEHPVVLTKLVVPEPAIAYAIE
                     PKAKGDEDKISTALHKLIEEDPSL"
BASE COUNT          173 a          371 c          346 g          186 t
ORIGIN      
        1 cagcgaggga tcctcttcga tgagcttgtg gagcgcggtc gagatcttgt cctcgtcccc
       61 cttcgccttc ggctcgatgg cataggcgat cgccggttcc ggaacgacga gcttcgtcaa
      121 gacgaccgga tgctccttga ccgtcagggt gtcgcccgtc atcgtctcct tcagcttcgc
      181 gacggcgacg atgtcgcccg cccgggcctc cgggacattg acgtgctcct tgccctgcgg
      241 gaggaagaga ccggagaagc gctcggggat gctcttcgac gcgttccagt aagtgccgtc
      301 ggactggaag tggccgcgcc gcacccggag gtaggagatc cttcccgcga acgggtcgga
      361 gaccgtcttc acgacctgag ccacggcgtg acctttctcg tccgtcacga cctcgaccgg
      421 cttcccgtcc tttccgatcc cttcgacctt cgtgccctcg ggcgagggga agagggccac
      481 gcaggcgtcg agaacgcgca ggaccccgat cccctgtgcg gacgaggtgc agaagaccgg
      541 aaagagcttg cgggccgcaa tctccttctt caggccgggc acgaggtcgc ccggctcgag
      601 cgtcccctgg gcgaagaacc tctccatgag cgtgtcatcg ccttcggcga ccatctcgac
      661 cagcttctcg tgctcttcgt gagcccgcgc cgagagatcg tccgggatgg gcccatcgac
      721 gcgccggccg ccttcgtgaa ggtgcgactc catccggacg aggtccaccg tcccccggaa
      781 ggacttctcc tcgccgaccg ggatctggag aggaacgacg ccccgcccgt atttgcgacg
      841 gagcgattcc atcgtccggt cgaacgaggc ccggtcgcgg tccatccggt tgaccacgaa
      901 gatcacgggc cggccgaact cggcggcgaa cttccagact ttgtcggtct ggacctcgac
      961 tccggagacc gcatcgagca cgatcagcac ggcgtcggcg gccgcaaccg ccgcgtgcgc
     1021 ctcgggagag aagatgccgt atcccggcgc gtccacgaag ttgacgcgga cgtcgc
//
LOCUS       DATLMA010000279         1135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_207582, whole genome shotgun sequence.
ACCESSION   DATLMA010000279 DATLMA010000000
VERSION     DATLMA010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207582"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VNA10_03525"
     CDS             <1..318
                     /locus_tag="VNA10_03525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36780.1"
                     /translation="VLGSNGLRRVAAENIRRARELAKAIEAIAGFEAPLFHGAHFNEF
                     VVRRKKGYAAVHRALLEKGIHGGLPLTRQLPELSDAALYATTGRHTPEAVARLLAALG
                     AVR"
     gene            315..>1135
                     /locus_tag="VNA10_03530"
     CDS             315..>1135
                     /locus_tag="VNA10_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010901764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HVG36781.1"
                     /translation="MNFRQAYWDEPLLMEKRSAPDTDVDLADLVPAKIRRQQLAIPNL
                     SEHDVVRHFTRLSQMNFGIDTGFYPLGSCTMKFNPKFTEELAALPTVTRIHPDQDEST
                     VQGALRLLYELQGLLAQIAGMDAVTLQPAAGAQGEYTGLLLAQAYHRERGEERHQVII
                     PDTAHGTNPASAGMLGFDLIEIPSRDGRVDLKALEAAAGPKTLALMLTNPNTLGIFEE
                     HVLDIAQIVHDAGGLLYYDGANFNAILGRTSPGKMNFDIVHFNLHKTFTTPHGGGG"
BASE COUNT          216 a          392 c          348 g          179 t
ORIGIN      
        1 gtgctcggtt cgaacggcct ccgtcgggtg gccgcggaga acatccgccg cgcgcgggaa
       61 ctcgcgaagg cgattgaggc aatcgccgga ttcgaagccc cgttgttcca cggagcgcac
      121 ttcaacgagt tcgtcgtgcg caggaagaaa ggttatgccg cggtccatcg agccctcctg
      181 gagaagggga tccacggcgg attgccgctc acccgacagc tcccggaact gagtgatgcc
      241 gctctctacg caacgaccgg tcgccacacc ccggaggccg tcgcgcggct gctcgcggcc
      301 ttgggggccg ttcgatgaac tttcgccaag cgtactggga cgagccgctc ctcatggaga
      361 agcggtccgc tccggacacg gacgtcgacc ttgcggacct cgtccccgcg aagatccggc
      421 ggcagcaact cgccatcccg aatctctcgg agcacgacgt cgtccggcac ttcacgcggc
      481 tttcacagat gaactttgga atcgacacgg ggttctatcc gctcggttcg tgcacgatga
      541 aattcaaccc gaagttcacg gaggagctcg cggcgctccc gacggtcacg cgcatccatc
      601 cggaccagga cgagtcgacg gttcagggtg ccctccgtct cctctacgag ctgcagggtc
      661 tcctcgcaca gatcgcggga atggacgcgg tcacgctcca gcccgcggcg ggagcccaag
      721 gagagtacac gggccttctc ctcgcgcaag cgtaccatcg ggagcgggga gaggagcggc
      781 accaagtcat catccccgac acggcgcacg gcacgaaccc cgcctccgcc ggaatgctcg
      841 gattcgacct gatcgagatt ccctcgagag atggccgggt cgacctgaag gccctcgagg
      901 ccgccgccgg tccgaagacg ctcgccctca tgctgacgaa cccgaacacc ctggggatct
      961 tcgaagaaca tgtcctagac atcgcacaga tcgtgcacga cgcgggcggc ctgctgtact
     1021 acgacggcgc caacttcaac gcgatcctgg gccgcacctc gcccggcaag atgaacttcg
     1081 acatcgtcca cttcaatctg cacaagacct tcacgacgcc ccatggcggc ggcgg
//
LOCUS       DATLMA010000280         3191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_391866, whole genome shotgun sequence.
ACCESSION   DATLMA010000280 DATLMA010000000
VERSION     DATLMA010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391866"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VNA10_03535"
     CDS             complement(<1..627)
                     /locus_tag="VNA10_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019006679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HVG36782.1"
                     /translation="MNGEAHRISLVDGFDRLLAWPVLHGVARYEHQERTALRVLRDLR
                     GRAILADEVGLGKTIEAGLVLKEYAVRGLIHRVLVLTPAALTGQWREEMETKFALPFA
                     VLRSIRDWDRSPFLIASMDTAKREPHRRAAQARPWDLIVVDEAHRLKNRFSLNWRFVA
                     GLSKKYMLLLTATPVQNDMDELFNLVTLLKPGQLHTYDRFLERYVASPD"
     gene            complement(858..2258)
                     /locus_tag="VNA10_03540"
     CDS             complement(858..2258)
                     /locus_tag="VNA10_03540"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG36783.1"
                     /translation="MAGIDSRIVIVGLPQVAASLRADAEQAIWITQAYVLGSTVALLL
                     VGRISDIVGRVKLYTSGFAVFTLGSLLTSLALDPAQVIAFRAIQGLGSAILFTNSAAM
                     IVDATPSQELGLSLGINQVAFRMGSMAGLTLSGIILSFLDWRALFYVNVPIGIFGTAW
                     ARLRLREVGKLERGAPIDWGGFAAFTVFIMGLLLALTLAAYGVAETRTVAVLFAVSLV
                     SLALFVVLERRHPHPLLDLKLLRIREFTGGVVAQLLNAIAFGAVLLLLSLYFQLVLKQ
                     SPLTTGLLMIPLDIATLAAGPLSGRLSDKYGHLPFTTSGLAVISLSLFLFSTTDAATP
                     YSHLVVYMLLFGAGLGFFASPNISSIMGSVPPERRGIASGFRATFFNVGYTISLNLAI
                     LITTFTVPYMLVTQIISSGNTASISDTDRMLFAQGIKTTYLWLAGINTLAILPSLLRG
                     RRSSRDASPSIAAADP"
     gene            2257..2385
                     /locus_tag="VNA10_03545"
     CDS             2257..2385
                     /locus_tag="VNA10_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36784.1"
                     /translation="MSTPTVVTVKTVHLYWIRLASVGGVRAAASDPISRDEATGIR"
     gene            complement(2426..2851)
                     /locus_tag="VNA10_03550"
     CDS             complement(2426..2851)
                     /locus_tag="VNA10_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusA-like transcription termination
                     signal-binding factor"
                     /protein_id="HVG36785.1"
                     /translation="MAEIVFDEQTIKYVALFQDLTRTTVVDCVDAGDKLIFVVKEGDI
                     GKAIGKKGENIAKLKRLINKDIHVVEYSEQPDKFVANVFRNFDVKSVQIEQRGDVVHA
                     TVTVESTKKGRAIGKDGKNLRVSRDLIARHHPIQSVSVA"
     gene            complement(2859..>3191)
                     /locus_tag="VNA10_03555"
     CDS             complement(2859..>3191)
                     /locus_tag="VNA10_03555"
                     /inference="COORDINATES: protein motif:HMM:NF002172.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30e"
                     /protein_id="HVG36786.1"
                     /translation="RDASGSRAGPRSAPGRGRPVIDVPRALRVAADTGEVRFGLREVR
                     RAAKSKKAKLVVLASNCPEEATRNLGDVRLFRFGGTNVDLGAACGVPFSVAAVAVISP
                     GESNILTV"
BASE COUNT          584 a          998 c         1111 g          498 t
ORIGIN      
        1 gtccgggctc gccacgtacc gctcgaggaa ccgatcgtac gtgtgcaact ggccgggttt
       61 cagcagggtg acgaggttga agagctcgtc catgtcgttc tggaccggag tcgcggtcag
      121 gagcagcatg tacttcttcg acagcccggc cacgaaccgc cagttcaggc tgaagcggtt
      181 cttgagtcga tgggcctcgt ccacgacgat gaggtcccac ggccgggcct gcgccgctcg
      241 ccgatggggc tctcgcttcg cggtgtccat ggacgcgatg aggaacggac ttcggtccca
      301 atcgcggatc gaccggagga cggcgaaggg caaggcgaac ttcgtctcca tctcttcccg
      361 ccactggccc gtcagcgcgg ccggggtgag gacgaggaca cgatggatga gtcctcggac
      421 ggcgtattcc ttgaggacca gtcccgcctc gatcgtcttg ccgaggccga cctcgtcggc
      481 gaggatcgcc cgaccccgca agtcgcgcaa gacccggagc gctgtgcgct cctggtgctc
      541 gtaccgtgcg acgccgtgaa ggaccggcca cgcgaggagg cggtcgaatc cgtcgacgag
      601 ggagatccga tgggcctcgc cgttcaagcg ccacgcgcgg ggtccgtcgc ccggcgacgc
      661 gaacgcacgg gcgaggaggt cccgatccga atcgtcaaat cgcaggggga gggaggcatc
      721 tgccgaggga gggcgctccc tagccgggag ggacatggag gggggatccc ttcacctgcc
      781 accgcaggcg aggcgaaagc ggccccggcc gtaataatcg tttggttgac gacgacgcgc
      841 gtccggagac cttgcaacta tgggtccgcg gcggcgatgg atgggctggc gtcgcggctc
      901 gatcgccggc cccggagcaa ggacggcagg atcgcgagcg tgttgatgcc cgcgagccac
      961 aggtacgtcg tcttgatccc ttgcgcgaag agcatccgat ccgtgtccga gatcgaggcg
     1021 gtgttcccgg acgagatgat ttgcgtgacg agcatgtacg gcacggtgaa ggtcgtgatg
     1081 agaatcgcga ggttcaagct gatcgtgtat ccgacgttga agaacgtcgc acggaacccg
     1141 gaagcgatcc cgcgccgctc gggcgggacg gaccccatga tcgaactgat gttcggcgat
     1201 gcgaagaacc cgaggcctgc gccgaagagc agcatgtaga caacgagatg cgaatacgga
     1261 gtcgccgcgt ccgtcgtcga gaacaggaac agggagaggc tgatgacggc caagccggac
     1321 gtcgtgaagg gcaggtgccc gtacttgtcc gacaggcggc cgcttaacgg tcccgccgcg
     1381 agcgtggcga tgtccagcgg gatcatcagg aggcccgtgg tcagcgggct ctgcttcagc
     1441 acgagttgga agtagaggct caggaggagc aggaccgcgc cgaacgcgat cgcattcagg
     1501 agctgagcga cgacgccgcc ggtgaactcg cggatccgga ggagcttgag gtcgagcagg
     1561 gggtggggat ggcggcgctc gaggaccacg aacagtgcga gactgacaag ggacacggca
     1621 aacaacaccg ccacggtcct ggtctcggcg accccgtacg ccgcgagtgt gagggcgagg
     1681 aggaggccca tgatgaacac ggtgaacgcg gcgaaaccgc cccaatcgat cggcgcaccg
     1741 cgctcgagct tgccgacttc ccgcaagcgg agacgagccc acgcggtgcc gaagatcccg
     1801 atcggcacgt tcacgtaaaa gagggcgcgc caatcgagga acgagaggat gatgccgctc
     1861 agcgtcagac cggccatgga ccccatccgg aaggcgacct ggttgatccc gagcgaaagc
     1921 ccaagctcct gagacggggt cgcgtcgacg atcatcgccg cagagttcgt gaacaggatc
     1981 gcggagccca ggccctggat cgctcggaag gcgatcacct gggccgggtc gagcgcgagg
     2041 ctcgtcagga gggagccgag cgtgaagacc gcgaatccgc tcgtgtacag tttcacgcgg
     2101 ccgacgatgt ccgagatgcg cccgacgagg aggagcgcga ccgtgctccc gaggacgtac
     2161 gcctgcgtga tccagatcgc ctgttccgcg tcggcccgga gactggcggc gacctgcgga
     2221 aggccgacga tcacgatgcg ggagtcgatc ccggccatga gtacgcccac ggtcgtgacc
     2281 gtcaagaccg tccacttgta ctggatccgg ctcgcctccg tcggcggagt ccgggccgcc
     2341 gcgagcgacc cgatttcgcg cgacgaagca accgggatac gttaaggttc ctactcacgc
     2401 gtggtgacgg gcggacccgg tgccgtcatg cgacgctcac gctctgaatc ggatgatggc
     2461 gggcgatcag gtccctcgag acgcgcaggt tcttcccgtc cttgccgatc gcgcggccct
     2521 tcttcgtcga ctccaccgtg accgtggcgt ggacgacgtc gccccgttgt tcgatctgga
     2581 cggacttgac gtcgaaattc cggaagacgt ttgcgacgaa cttgtccggt tgctccgaat
     2641 actcgacgac gtggatgtcc ttgttgatca ggcgcttcag cttcgcgatg ttctcgccct
     2701 tcttgccgat cgccttgccg atgtcgcctt ccttgacgac gaagatgagc ttgtcgccgg
     2761 cgtcgacgca gtccacgacc gtcgtccgcg tgagatcctg gaacaacgcg acgtacttga
     2821 tcgtctgctc gtcgaaaacg atctcggcca tgcgaatcct agacggtcag gatgttcgat
     2881 tccccggggc tgatcaccgc gaccgcggcg acggagaacg gcacgccaca ggcggcgccc
     2941 agatccacgt tcgtgccgcc gaaccggaac agacggacgt cccccaggtt ccgcgtggct
     3001 tcctcggggc agttcgaggc gaggaccacg agcttcgcct tcttcgactt cgccgcgcgg
     3061 cgcacctcgc gcaggccgaa acgcacctcg ccggtgtccg ccgcgacgcg gagcgcacgg
     3121 gggacgtcga tcacgggacg acctcttcca ggggcgcttc gggggccggc gcgggagccg
     3181 gaggcgtcac g
//
LOCUS       DATLMA010000281         2057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_871736, whole genome shotgun sequence.
ACCESSION   DATLMA010000281 DATLMA010000000
VERSION     DATLMA010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_871736"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..>2057)
                     /locus_tag="VNA10_03560"
     CDS             complement(21..>2057)
                     /locus_tag="VNA10_03560"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HVG36787.1"
                     /translation="YSIALQDNYCNVNPSLPNYLCLSGASDFGCSGYDGGPNSNNCTN
                     SAWNAPNIIDRILGAGLTWKAYMEDMPSNCYGSDSGNYAVRHNPFVYYNDIVSNSTRC
                     NQVVPAGTADSALLGDLASTSTASNYMWLTPNVCNDMHDCGIPTGDAYLSVLAPLILG
                     SNVFLNHRAALLLTFDEGYGQPIYTVWAGSVVKTAYSSSTAYSHFSVLSTIESNWNLP
                     PLTTNDQNAPNMNEFFTTQTNPDFSLSANPSTVSFVAGQSATSTISLHATGGFNGTVA
                     LTASSSPSGITTSCAPSSISGSQTSTCTFTGSTAGSYTVTVTGTSGSLVHTTSIGVTV
                     TAPPTPDFSITANPASVSFVAGQSASSTISLHSSGGFAGTVSLTVATSPAGLTASCVP
                     TSIAGSQTSTCTISGTTPGSYTAVVTGTSGTLSHSTSIGVAVTGSGPTARFTYSPPVP
                     IANTTVVFDASSSSDSDPNAILEARWDWEGDGLWDTPWSPSLSGQHVFTNGGTYAVTL
                     EILDSSGLVDTAVRSVIVRSADHIPPQVSILSPPDFTVVVAANVTVVGVASDNVGIAT
                     IELSTDNATWTPTIGTTSWSGVVSLKAGTNKIYARATDTSGNNHVAVITVIAGNPDQG
                     PGFVPGAIDPTLPVLLVFAGIAALVGTHAFLWNRSRTSRPARKKQSATVRRPEK"
BASE COUNT          376 a          600 c          704 g          377 t
ORIGIN      
        1 cgagccatcc atcgcgattc ttacttctcc ggtcgacgga cggtcgccga ttgcttcttc
       61 cgagcgggtc gcgaggtcct cgatcggttc cagaggaacg catgggtccc gacgagtgcg
      121 gcgatccccg cgaagacgag caggaccggg agggtcggat cgatcgcgcc gggcacgaac
      181 cctggaccct ggtccgggtt acctgcgatc acggtaatga ccgccacgtg attgttcccc
      241 gacgtgtcgg tcgcgcgggc atagatcttg ttcgtccccg ccttcaggga gacgactccc
      301 gaccacgacg tcgtcccgat cgtcggcgtc caggtcgcgt tgtccgtgct gagctcgatc
      361 gtcgcaattc ccacattgtc ggaggcgact cccaccacgg tgacattggc cgccacaacg
      421 acggtgaagt ccggcgggga gaggatcgag acctgaggag ggatatggtc cgcgctccgg
      481 acgatgaccg accgcaccgc ggtgtcgacc aatccggagg aatcgaggat ctccaatgtc
      541 accgcgtatg ttcccccgtt cgtgaagaca tgctgcccgg acagcgaggg agaccacggg
      601 gtgtcccaca ggccgtctcc ttcccaatcc cacctcgcct cgagaatcgc gttcggatcg
      661 gaatcggagg aggacgatgc atcgaagacg accgtggtgt tcgcgatggg caccggcggg
      721 gagtacgtga accgggccgt cggtcccgag cccgtcaccg cgacaccgat ggacgtcgaa
      781 tgcgagaggg ttccgctcgt gcccgtgacg acggccgtgt atgatccggg cgtcgtcccg
      841 ctgatcgtgc acgtggacgt ctggctgcca gcgatgctcg tcgggacgca ggaggccgtg
      901 agtcccgccg gagatgtggc cacggtgagt gagacggttc ccgcaaaccc tccgctggaa
      961 tgcagggaga tggtcgaact ggcggattgg cctgcaacga acgagacact cgccgggttc
     1021 gcggtgatcg agaaatcggg agtgggcggt gccgtgaccg tgacgccgat cgaggtcgtg
     1081 tggacgaggg agccactcgt cccggtaacc gtgacggtat acgatcccgc ggtcgatccg
     1141 gtgaacgtgc aagtcgacgt ctgactcccg ctgatgctcg agggggcgca cgaggtcgtg
     1201 atgccggagg gcgacgaact cgcggtcagg gcaacggttc cattgaagcc gcccgttgcg
     1261 tgaagcgaga tcgtggacgt cgcggattga cccgcgacga acgaaacggt cgagggattg
     1321 gccgaaagag agaagtccgg gttcgtctgc gtcgtgaaga actcgttcat gttcggggcg
     1381 ttctggtcgt tcgtcgtcaa gggaggcagg ttccagttcg actcgatcgt cgagagcacc
     1441 gagaagtggc tgtacgccgt cgacgaggag tacgctgtct tcacgacgga acctgcccac
     1501 accgtgtaga tcggctggcc atagccctca tcgaacgtga ggaggagcgc cgcccggtgg
     1561 ttgaggaaga cgttgctccc gaggatcaac ggcgcgagga cggacagata ggcgtcgccc
     1621 gtcggaatgc cgcagtcgtg catgtcgttg catacgttcg gcgtgagcca catgtagttc
     1681 gaggcggtcg acgtcgaggc gaggtcgccc aacaaggcgc tgtcggctgt tcccgccggg
     1741 accacctggt tgcatcgcgt cgaattgctg acgatgtcgt tgtagtagac gaacggattg
     1801 tgtcggaccg cgtagttgcc ggagtcgctg ccgtagcagt tcgacggcat gtcctccatg
     1861 tacgccttcc acgtcaaccc ggccccgagg atccgatcga tgatgttcgg ggcgttccac
     1921 gcactgttcg tgcagttgtt ggaattcggg ccgccgtcgt atccggaaca tccgaagtcc
     1981 gaggcgcccg agagacatag gtagttcgga agactcggat tcacgttgca atagttgtcc
     2041 tggagggcaa tcgagta
//
LOCUS       DATLMA010000282         4884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_148231, whole genome shotgun sequence.
ACCESSION   DATLMA010000282 DATLMA010000000
VERSION     DATLMA010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4884
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148231"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VNA10_03565"
     CDS             <1..515
                     /locus_tag="VNA10_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36788.1"
                     /translation="STFVCVSEGIAFQRELEFLPILQEIAAGKLSGSDEDVFATALER
                     WGGIGRVSREYEFLAALWRIVRFLRVVGDARINSGKQDIVHFVEWAHRTTGLERATVY
                     YQLFPAHQIIGPGYASTYAIIGERIRELQQDALKHGKSLRDFNAYASSIGWPPKTVFE
                     AKLEAWVRSE"
     gene            614..1813
                     /locus_tag="VNA10_03570"
     CDS             614..1813
                     /locus_tag="VNA10_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018037467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HVG36789.1"
                     /translation="MAAKKRTRKTAAKRSPSKKKPYDMALIQRGARLRRSAFFDKTLE
                     AGCRAYTVYNHTFLPSYYDDPVNEYWHLLKHVALWDVAVERNVEISGPDGFAFMQLLT
                     PRDMSKCKVGQGKYVLITDEDGGILNDPVLLRLEENRFWIALADSDILLWAKGVARHA
                     GMKVTIREPDASPLQVQGPKSKPLMADLFGEKVTSLPYYFFVRAELDGIPLLVTRTGW
                     TGEVGYELYLLDGSRGGQLWDTVVRAGKKYNLRPTGPSDIRRIEAGILNYGADMTIEN
                     NPYEVGLGWTVDLDKPGDFIGKAALQRIKDEGPKWKLVGIEIDGKPIEFNMTKWTVTA
                     GGRPVGRVTSAIYSPRLKTNIGYAMLPIVHTDMGAELTVEHPEGRRHATVAKKPFLDP
                     GKEIPKA"
     gene            complement(2370..3074)
                     /locus_tag="VNA10_03575"
     CDS             complement(2370..3074)
                     /locus_tag="VNA10_03575"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HVG36790.1"
                     /translation="MDGKVVVVTGGTGYLGSSVCKAFAETGATVVSVYLLDREIPYFE
                     KALGALGKNVTLLKADVTQPGEMERVTKEILPRLKRIDVLVNTVGGYMAGPVEETSAE
                     DFDRAMALNLKSAFLACKAVVPSMREAKRGAIVSVSSEAALQGDEESFLYSASKSGVN
                     RLTESLARELKAANVRVNCVMPRIMDTLSNREAMPKANFSKWVTTDQVARAIRWLCSD
                     DAAPITGAAIPVYGGP"
     gene            3165..3497
                     /locus_tag="VNA10_03580"
     CDS             3165..3497
                     /locus_tag="VNA10_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36791.1"
                     /translation="MSDEVREAFVARVKAIDPVFKRGDLERFWPMLRELTAMAPDRRD
                     LSQKKSHYLASLAVRSLGRDDPRSALAFLDFAERSIDRSHLTPFLLGERADFRRQAEV
                     ILKARRTR"
     gene            complement(3504..4115)
                     /gene="yaaA"
                     /locus_tag="VNA10_03585"
     CDS             complement(3504..4115)
                     /gene="yaaA"
                     /locus_tag="VNA10_03585"
                     /inference="COORDINATES: protein motif:HMM:NF015820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HVG36792.1"
                     /translation="MAKPEIIVLIPESTRKARGGSPDSPEVDSIAAALPATTRAKLDA
                     LRDEVLHKSPQGSVRAGGILPAYQRFQGNMYMSIPDEAWAKRAPNVEVIIASGLRGLV
                     ASRDTIPSYALSMAEPTPPFGKMNRWWHDRGLPGILASYLESIQPRLVVDLLSLEYRQ
                     SAAGYAAGLKGIDVRTIDFPGMGRASQPLRGERIARILQSGTA"
     gene            complement(4188..4757)
                     /locus_tag="VNA10_03590"
     CDS             complement(4188..4757)
                     /locus_tag="VNA10_03590"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HVG36793.1"
                     /translation="MPGTGPFLWLMRHAPPSGFQQVPPGGMCVCAYLFVTRDSQILLG
                     KYADDPQWEALAGLDPDRRRNHGKGWTVPATHLKLGEDPRVAARRVGEEALGIRGLRY
                     SEPRSETDFYPSKMVPGEMHYDIWFFIDGTPPKEYGIRVPPWYTELSWQDPRSVPAAA
                     YTRGHEDVVARWLAAKTGGAPSEREAVTR"
BASE COUNT          916 a         1556 c         1544 g          868 t
ORIGIN      
        1 cctcgacgtt cgtctgcgtc tccgaaggca tcgctttcca gcgggaactc gagttcctcc
       61 cgatcctcca ggagattgcg gccggcaagc tctccggatc ggacgaggat gtcttcgcga
      121 ccgccttgga aaggtgggga ggtatcgggc gggtctcgcg cgagtacgag ttcctcgcgg
      181 cgctctggcg gatcgtccgg ttcttgcggg tcgtcgggga cgctcgcatc aattcgggga
      241 agcaggacat cgtccacttc gttgagtggg ctcaccgcac gacggggctc gagcgggcga
      301 cggtctacta ccagctgttc ccggcgcatc agatcatcgg accgggttac gcttcgacgt
      361 acgcgatcat cggtgagcgg atccgggagc tgcagcagga cgcgctgaaa cacgggaaga
      421 gcctccggga cttcaacgcg tatgcgagct cgatcgggtg gccaccgaag accgtcttcg
      481 aagcgaaact cgaggcgtgg gtccgctccg aatgagcccg actccggttg gatcgtcgcc
      541 tcgacggaat cctttatgca ggcatccgcg attgccgcgc gcctccccga cggcatgagg
      601 atctgggaca tccatggcgg cgaagaagcg cacccggaag acggcggcga agcggtcccc
      661 ctcgaagaag aagccctacg acatggcgct catccagcgc ggcgcgcgcc tccgccggtc
      721 cgcgttcttc gacaagacgc tcgaggcggg atgccgggcg tacacggtgt acaaccacac
      781 attcctgccg agctactacg acgatccggt caacgaatat tggcacttgc tcaagcacgt
      841 cgccttgtgg gacgtcgccg tcgaacgcaa cgtcgagatc agcgggcccg atggatttgc
      901 gttcatgcag ttgctcaccc cgcgcgacat gtcgaagtgc aaggtcggcc aagggaagta
      961 cgtcctgatc acggacgagg acggcggcat cctgaacgat ccggtcctcc tgcgactcga
     1021 agagaaccga ttctggatcg ccctcgcgga cagcgacatc ctcctgtggg cgaaaggcgt
     1081 cgcacggcat gccggcatga aggtgacgat ccgcgagccg gacgcctcgc cgctccaggt
     1141 ccaaggtccg aagtcgaagc ccctgatggc ggacttgttc ggcgagaaag tcacatccct
     1201 gccgtattac ttctttgtaa gggcggaact cgacgggatc cccctcctcg tcactcgcac
     1261 cggttggacg ggcgaggtcg gatacgagct gtatctgctc gacggttcac ggggcggaca
     1321 gctctgggac acggtggtca gagcgggaaa gaagtacaac ctccggccca cgggtccctc
     1381 ggatatccgc cgcatcgagg cgggcatcct gaactacggc gcggacatga cgatcgagaa
     1441 caacccgtac gaagtcgggc tcggatggac cgtggacctc gacaagccgg gagacttcat
     1501 cggcaaagcg gccctgcagc gaatcaagga cgaaggcccg aaatggaaac tcgtcggcat
     1561 cgaaatcgat ggcaagccaa tcgagttcaa tatgacgaaa tggaccgtga cggctggagg
     1621 aagaccagtt ggccgggtga catccgcgat ttactcccca cggctgaaga cgaacatcgg
     1681 atatgcgatg ctgccgattg tccacacgga catgggggcg gagctcacgg tcgaacaccc
     1741 ggaggggcgg cgacatgcga ccgtcgcgaa aaagccattc ctggatccgg gcaaggaaat
     1801 tccgaaggcg tagggggctt tgatggtcaa gctcgggttc tggctgctag ccagttcttt
     1861 tcgatggcgg tttggccgcg aaaaactgct tgtagacgga gcttgtcgag ttcgtcgatg
     1921 atccccagcc agtcgacgaa gctcaaaatt cgcaaggaaa tgcctctgtt cactctggac
     1981 gaagggagcg tagaaaacaa cctcgacgca agaggaacgg gccatagccg tggcgtctcg
     2041 caggagtagc tattgcccta cgtgcacttg tcgatcccct ctgggctcga gcagtcactg
     2101 gcggcgttgt gtcccttgtg gtagcgatcg gcgttttcgt gcaagtcgcc tggagatccg
     2161 acccgggtac cattccactg gtgcccgcct tggccttgga aatagtcttc atgactctcg
     2221 ctgtgtcgct gcttacctac ggcttgaagg cccgacagcg gacagactga ccctcagcga
     2281 acgttcgaac cccgggcaaa ccaagccgcc ttcgaatctc tcggggaacg gatcgtcctg
     2341 attcgacgcg caagtcccga acaggaaagt cagggaccgc cgtagaccgg gatcgctgcc
     2401 ccggtgatcg gggcggcgtc gtccgagcac agccagcgaa tcgcccgcgc gacttgatcc
     2461 gtcgtcaccc atttcgagaa gttcgccttc ggcatcgctt cccgattcga tagcgtgtcc
     2521 atgatccggg gcatgacgca gttcacgcgc acgttcgcgg ccttcaactc ccgcgccaag
     2581 ctctccgtca agcgattcac gcccgacttg ctggcggagt agaggaacga ttcttcgtcc
     2641 ccctggaggg ccgcttcgct cgagacgctc acaatcgctc cccgtttcgc ctcccgcatc
     2701 gagggaacga cggccttgca cgcgaggaac gccgacttga ggttcaaggc catcgcgcga
     2761 tcgaagtcct ccgcggaggt ctcctcgacg ggacccgcca tgtacccgcc aaccgtgttc
     2821 acgaggacgt caatccgttt cagccgcggg aggatttcct tcgtcactcg ctccatctcc
     2881 cccggctgcg tgacgtccgc tttgaggagc gtcacgttct tcccgagggc cccgagggcc
     2941 ttctcaaagt acgggatctc gcggtccaag agatacacgg agacgaccgt cgcccccgtt
     3001 tccgcgaagg ctttgcacac cgaagagcca aggtatcccg tccctcccgt cacgacgacg
     3061 actttcccgt ccaatcgacc accacctccg gtaggccgtc gcctttcatg agtctggcgg
     3121 gtcccgacca aactgggaaa acggagggag gcgattgccg tggcgtgtcg gacgaggtcc
     3181 gagaggcgtt cgtcgcgcgg gtcaaggcga tcgacccggt gttcaagcga ggggatctgg
     3241 aacgcttctg gccgatgctg cgcgagttga cggccatggc cccggaccgc cgcgacctct
     3301 ctcagaagaa atctcattac ctcgcgagct tggcggttcg gtctctcggc cgggacgacc
     3361 cgcggtcggc cctcgccttc ctggactttg cggagcgctc gattgaccga agccacctca
     3421 ccccgttcct cctcggggag cgggccgatt tccgtcggca ggccgaagtc atcctgaagg
     3481 ctaggcggac ccgttagcga ggatcacgcg gttccggact gcaggatccg ggcgatgcgt
     3541 tctcctcgaa gcggctggct ggcccggccc atccccggaa agtcgatcgt ccgaacgtcg
     3601 atccccttga ggcccgcggc atatccggcc gccgactgtc gatactccaa ggagagcagg
     3661 tcgacgacga ggcggggctg tatggattcc aagtacgaag ccaggatccc ggggagaccg
     3721 cggtcgtgcc accaccggtt catcttgccg aacggcggcg tcggctccgc catcgacagg
     3781 gcgtatgagg gaatcgtgtc ccgcgaggcg accagaccgc ggagtcccga ggcgatgatg
     3841 acttcgacgt tcggagcgcg cttagcccac gcttcgtcag ggatgctcat gtacatgttg
     3901 ccctggaacc gctggtacgc cggaaggatg ccgccggcgc ggaccgatcc ttgcgggctc
     3961 ttgtggagga cttcatcccg caatgcgtcg agcttcgctc gagttgttgc cggcaaggca
     4021 gcggcaatcg aatcgacttc aggggaatcg ggcgagccac cccgcgcttt gcgcgtgctc
     4081 tccgggatca acacgatgat ttccggtttc gccatcgacg tcgcgaacgc ccgatcgcgc
     4141 attagctctt gcgacccacg ccgagcgtcg aggtcgggcg ttgagaccta gcgggtgacg
     4201 gcctcgcgct ccgacggcgc ccctccggtt ttcgccgcca gccaccgcgc aacgacgtct
     4261 tcgtggcctc gcgtgtatgc ggccgctggc acggaccgcg gatcctgcca tgatagttct
     4321 gtgtaccacg gcggcacgcg aatcccatac tccttcggcg gcgtcccgtc gatgaagaac
     4381 cagatgtcgt agtgcatctc cccgggcacc atcttggacg gatagaaatc cgtctcggac
     4441 cgcggttcgg aataccgcaa cccgcgaatt ccgagggctt cctccccgac ccgccgggcc
     4501 gcgacgcggg gatcctcgcc gagtttcagg tgcgtcgccg gcacggtcca tccttttccg
     4561 tggttccgcc ggcgatccgg gtccaagccg gcaagcgcct cccactgggg gtcgtccgca
     4621 tacttcccga ggaggatctg gctgtcgcgt gtgacgaaca ggtaggcaca gacacacatc
     4681 ccgccgggcg gaacctgctg aaatcccgaa ggcggggcgt gcctcatcaa ccacaggaac
     4741 ggaccggtac cgggcatgcg agagggacag cgcggaccga gaaaaggatt ccctcgcctc
     4801 ggacgcaagt gagacgggag gatcgctcgg tcccgagtgc gcccaaaaag ctaaggtacg
     4861 ggccagagtc tgcggtacgg cgca
//
LOCUS       DATLMA010000283         1402 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_817112, whole genome shotgun sequence.
ACCESSION   DATLMA010000283 DATLMA010000000
VERSION     DATLMA010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817112"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="VNA10_03595"
     CDS             <1..521
                     /locus_tag="VNA10_03595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36794.1"
                     /translation="RSFAWDHLKLAHSILDPEALEILRSSSTEEMTAVELSRRCGVST
                     GRTYRWLRRLESLGLLVSREGGPQRRGVPSRLYRSALQSISVSLAEDQIRTRIEVNEG
                     SVPLISECMTMIESSDTPPVPRRRSHRRRVGAERIHFIDPLATASNSRRKLPINLPAF
                     LEEPLSRLLERR"
     gene            527..886
                     /locus_tag="VNA10_03600"
     CDS             527..886
                     /locus_tag="VNA10_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36795.1"
                     /translation="MQTHDLQEKHTIRQDVQIVPTPADREVVQDAYRRLRQDPEDTDA
                     LFAVAAWDEIVGDLDHALHLLNRLVSRKPDYPGVWWFRARVLKDLGRERDAIACEQIA
                     RMYVEPEFPESVRKLPV"
     gene            981..>1402
                     /locus_tag="VNA10_03605"
     CDS             981..>1402
                     /locus_tag="VNA10_03605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36796.1"
                     /translation="MAVSINRKLTSGRWPIVEVFPGLDRDAHFRRLFANDGLRETVLK
                     ETLIHLMPEDAYAYIDDERGHVVVGLYYLQSGEERTLYLDILHELVHIRQWHEGKKLW
                     DRRYSYVDRPTEVEAYKFAVEVARKLGMSDREIADYLRV"
BASE COUNT          275 a          434 c          427 g          266 t
ORIGIN      
        1 gccgaagctt cgcctgggac cacctgaagc tcgcacactc aatcctggat cctgaagccc
       61 tggaaattct ccggtcgagt tcgacggaag agatgaccgc ggtcgaactg agccgccgtt
      121 gcggagtgtc gaccggccga acctatcgat ggttgcgcag gctcgagtcc ctcgggcttc
      181 tcgtttcgcg cgaaggcggc ccgcagaggc gtggggtgcc ttccaggctg tatcggtcgg
      241 cgctgcagtc gatcagcgta agcctcgccg aagaccagat tcggacgcgc atcgaagtga
      301 acgagggttc ggtcccgctc atctcggagt gcatgacgat gatcgaatcg tcggacacgc
      361 ctcccgttcc gagacgccgt tcgcaccgac gccgggtcgg cgcggaacgc atccacttca
      421 ttgacccact cgcaacggcg tccaactccc gacgcaagct cccgatcaac ctcccggcgt
      481 tcctcgaaga acccctctcc cgccttttgg aacgccggtg aggtccatgc aaacccacga
      541 tcttcaggag aaacacacga tccgtcaaga cgttcagatc gtgccgacgc ccgcggaccg
      601 ggaggtcgtg caggacgcgt accgtcgcct ccgccaggat cccgaagaca ctgatgcgct
      661 cttcgccgtc gcggcgtggg atgagatcgt cggagatctg gaccatgcgc tgcacctgtt
      721 gaatcggctc gtgtctcgga agccggatta cccgggcgtc tggtggttcc gcgcgcgggt
      781 tctgaaggac ctgggacggg aacgcgacgc gatcgcgtgc gagcagattg cccggatgta
      841 tgtcgaaccc gaattcccgg aatccgttcg caagttaccc gtctgactcg attcatatcc
      901 aaagttggag ttacaacgag aggtccgtcg ggaccccgtc gcagtgaggc ttaagtggga
      961 gaatctcttc gactctgtct gtggcagtct cgatcaaccg caagctcacc tcgggcaggt
     1021 ggccgatcgt cgaggtcttc cccggcctgg atcgagacgc tcacttcaga cgcctgtttg
     1081 ccaacgacgg cctccgggag accgtcctga aggaaacgct catccacctc atgccagaag
     1141 acgcctacgc gtacatcgat gacgagagag ggcacgtcgt ggtcgggcta tactaccttc
     1201 agagtggcga ggagcggacg ctgtatcttg acatccttca cgaactggtc catattcgtc
     1261 aatggcacga aggcaagaaa ctctgggatc gccgctacag ttatgtggac cggccgaccg
     1321 aagttgaggc ttacaaattc gcggtcgagg tcgcccgcaa gctggggatg tcggaccggg
     1381 agatcgctga ctatctccgg gt
//
LOCUS       DATLMA010000284         1507 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_572479, whole genome shotgun sequence.
ACCESSION   DATLMA010000284 DATLMA010000000
VERSION     DATLMA010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_572479"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VNA10_03610"
     CDS             complement(<1..791)
                     /locus_tag="VNA10_03610"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36797.1"
                     /translation="MATETKSRSSSEITWESLLGPHTFFGRILNPMIRKRRTLAGAMT
                     WIGLFLLIAFVLIAFLAPLFTLAGLLRDPEQALCGSDYHYCLVGETRLVNQAPGGLAI
                     MGTDYLGRDIFSRVLFGTRTSLEIMSIGVFLALLIGFPVGLYSGYTGGRLDRVFVLVM
                     DSIYAFPSLLLAAIIAVILGKGVFNIGIAITVIYVPLYFRVTRNHTLSIKQETYVEAA
                     RALGAKPWTVMWSYIAYNVIVAIPVIFALSAADAILTAAGLSYLG"
     gene            complement(793..>1507)
                     /locus_tag="VNA10_03615"
     CDS             complement(793..>1507)
                     /locus_tag="VNA10_03615"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG36798.1"
                     /translation="PGTIELSIGAMAVATTVGVLMGLVGGVNRDKPVDVAARLYGTVI
                     FAIPIFWLGLMFQLVFGVQLGWLPTSQRFSLTPPTHVTGLLTIDSILAGSWPNFVDAI
                     RHLVLPCLTLGLYLSGFFTKTVRANLLLTVESDYAEAAKARGVRRRSIVYRYAFRNAL
                     IPVITVLGLQFAILFSGAVITERTFAWDGIGTLLLDSINSKDYPMIQGTIVVYAFIII
                     LVSMVIDIINGLIDPRVRY"
BASE COUNT          328 a          437 c          508 g          234 t
ORIGIN      
        1 tagccaaggt agctcaggcc ggccgccgtg aggatcgcgt ccgccgcgct gagcgcgaaa
       61 atcacgggga tcgcgacgat gacgttgtac gcgatgtagg accacatgac ggtccacggt
      121 ttcgcgccga gcgcccgcgc ggcctcgacg tacgtctcct gtttgatcga caaggtgtga
      181 ttgcgggtca cccggaaata caacgggacg tagatcacgg tgatcgcaat gccgatgttg
      241 aagacgccct tcccgaggat gaccgcgatg atggcggcga ggagcaacga ggggaacgcg
      301 taaatcgagt ccatcacgag cacgaagacc cggtcgagcc ggcctcccgt gtatccggag
      361 tacaatccga ccgggaagcc aatcaggagg gcgaggaaca cgccgatcga catgatctcg
      421 aggctcgtgc gggtcccaaa gaggacgcgg ctgaagatgt cccggccgag gtagtcggtc
      481 cccatgatcg cgaggccgcc gggcgcctgg ttgacgagtc gcgtctcgcc gacgaggcaa
      541 tagtggtagt ccgacccgca gagggcttgt tccgggtcgc gcaggaggcc cgcgagcgtg
      601 aacagggggg cgaggaaagc aatcaggacg aacgcaatca acaggaacag cccgatccac
      661 gtcatcgccc ccgccaaggt ccggcgcttc cggatcatcg ggttgaggat ccgtccgaag
      721 aacgtgtgcg gcccgaggag ggactcccac gtgatttcgc tcgacgaccg cgacttcgtt
      781 tcggtcgcca tgtcaatatc gaactctcgg gtcgatgagg ccgttgatga tgtcgatgac
      841 catcgagacg aggatgatga tgaaggcgta cacgacgatc gtcccctgga tcatgggata
      901 atccttggag ttgatcgagt ccaacaggag ggtcccaatc ccatcccagg cgaacgtccg
      961 ctcggtgatg accgcgccgc tgaacaggat cgcgaattgc agtcccagga ccgtgatcac
     1021 aggaatgagc gcgttgcgga acgcatagcg gtagacgatg gaacgccggc gaacccctcg
     1081 ggctttcgcg gcctccgcat agtccgactc gacggtcagg agaaggttcg cacggacggt
     1141 cttagtgaaa aaaccgctga gatagagacc gagggtcagg cacgggagga ccagatgccg
     1201 gatcgcgtcg acgaagttcg gccagctccc cgcgaggatc gaatcgatcg tcaggaggcc
     1261 cgtcacatgg gttggcgggg tcagcgagaa ccgttgactc gtcggaagcc agccgagttg
     1321 cacaccgaag acgagctgga acatgaggcc gagccagaaa atcggaatcg cgaagatgac
     1381 ggtgccgtag aggcgggcgg cgacgtcgac gggcttgtct cggttgaccc ccccgacgag
     1441 gcccatgagg actccgaccg tggtcgccac cgccattgcg ccgatggaga gctcaatggt
     1501 ccccggc
//
LOCUS       DATLMA010000285         5467 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_448925, whole genome shotgun sequence.
ACCESSION   DATLMA010000285 DATLMA010000000
VERSION     DATLMA010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5467
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448925"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VNA10_03620"
     CDS             <1..189
                     /locus_tag="VNA10_03620"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013719512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36799.1"
                     /translation="HEAANDRWQHRGLGRRLMDECERLARAEFDARIVRVTAGVGARG
                     YFRTLGYDLLTPYMVKAL"
     gene            complement(190..1008)
                     /locus_tag="VNA10_03625"
     CDS             complement(190..1008)
                     /locus_tag="VNA10_03625"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG36800.1"
                     /translation="MVDDHVKRKILLLGDGAVGKTSLIRRFVVDKFSDEYITTIGTKV
                     TKKDLRIESPGKATDMTFMIWDVLGQKGYRGVQESSFQGAKGALLVYDVTRSETAESL
                     HEYWIPHLLSVTDPIPLVLVANKVDLAESRRSVQEQLDDLKDTLQVDGFVSSAKTGLN
                     VEAGFLGLAKAMIAKADAKVGKGEAVEETWNPFIAVTDQIIVDFCEFMGGQEAAMPIV
                     RQQLTRAGVDVRAPTKEGLRLAVDYLAEAESSFRNAADVEASKLRRLGWIKEVS"
     gene            complement(1081..2103)
                     /locus_tag="VNA10_03630"
     CDS             complement(1081..2103)
                     /locus_tag="VNA10_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36801.1"
                     /translation="MVAPVGVRVADNRLGGLQPVQNRTARVPRYIPAVVLVLLALTLT
                     VSLAAAVPRRSYYQLAVILNDSHAPDVDFTFWLDSPYPNNASYSDTMAATISITAVFG
                     PELAYGQQAGGTYTDVTHNRIGDWWFYANTTETSQTASPVFTTVDVTVTYTDNFDQNP
                     RTIYRSLTFAVKYSPPAAPVNPFWAAAAGFGAAGVIGLGVYVTRRARLEELYLMHDSG
                     MLIRHWSRTQGMVHDSDIMSGMLIVLQEFVRDSFDDRGGTLEQLRFGQRQVLMLRGQH
                     TVLAAVIVGRHLNSLPRKLQIAVWEFERSHADILAKWDGNVALLPQADLIAARFIRPR
                     LRFHAN"
     gene            complement(2222..2812)
                     /locus_tag="VNA10_03635"
     CDS             complement(2222..2812)
                     /locus_tag="VNA10_03635"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HVG36802.1"
                     /translation="MVSSRDVDAFVRRLERRVAREVEGRSRSALAYSGGLSSTLLAMI
                     ARKRCALVCVVSGVEGSPDIQAARAAKAHLDYRVEYVILSRADAIRIRTQIATAHPKL
                     PRRDIDNLVPLHAALETEDGGPMLSGFGPPRLGGEMATVLRGLDVSFPILAVARGMTL
                     SRTMLRDAAMMLGLPATWARVAHRSPAEGAGIRALF"
     gene            complement(2817..4301)
                     /locus_tag="VNA10_03640"
     CDS             complement(2817..4301)
                     /locus_tag="VNA10_03640"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF003211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HVG36803.1"
                     /translation="MASYDDVMSLSIRRGFLWPAVDLYGGFAGFYDYGHNGVLMRRRW
                     EDLWIETFLGLSDDYHLIDTTTILPEPALKASGHVDHFTDILVTCTRCGESYRGDQLL
                     EAATHEEHEGLTPAEIDARIRELKIRCPNCKGELGPARPFNMMFPLEVGPTGKDRAYL
                     RPETAQGVFLNFKREFEALRRRLPLGLAIIGRAYRNEISPRQGAYRMREFLQAELQIF
                     FDPATFADGLRFEAVASTPIRIAWAAEKNQPGAHDLPARDLVARDLPPWYVYHLAAVQ
                     RFYLEGLRVPRDAFRFVELDEKERAFYNKIHFDIQVKQETLGGFKEVGGVHYRTDHDL
                     KGHEAVSHVKQSVTFGGSKLIPHVLELSFGVDRNIWALLDLSYSKGERVVLRLPPRIA
                     PVSVGVFPLVSKDGLPEKAEALHVNLKRRLTVSYDESGSIGRRYARMDEIGTPFSVTV
                     DHETLEGKGVTVRERDSQKQIRVAEADLTETLDRLLAGEVTFGA"
     gene            complement(4354..>5467)
                     /locus_tag="VNA10_03645"
     CDS             complement(4354..>5467)
                     /locus_tag="VNA10_03645"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HVG36804.1"
                     /translation="YDGRRFREGTVGWEEDVVVEIRSGRARRPLAEGLILPGLWNAHT
                     HLGDAIVTQELKGTIEELVAPPHGLKHRVLAKAKDAAVIAAMRRAMATMIRTGTTGFS
                     DFREGGLVGLKLLYAAVAALPLQGLALARPVGLSYNPREVGAILRAADGIAVSSYIDW
                     PRDAIEKLAADARRAKKIFAIHCSERVREEIDAVLDLKPAFLVHMVRATDGDLERCAD
                     AGVPIVVCPRSNAFFGMTPDIPRMLRLGVELHLGTDNAMINTPSLLREMEFAYRVARM
                     KGGVPAREILEMALRGRRLADPHATSAIRVGARADLVILDLPGGRNGFASIVRASASD
                     VRLVVSGGRLWPAPSPSVRDASMIRGRRRRVAGSAR"
BASE COUNT          968 a         1760 c         1742 g          997 t
ORIGIN      
        1 catgaggccg cgaacgaccg ttggcagcat cgcgggctcg ggcgtcgact catggacgag
       61 tgcgagcgcc tcgcccgggc cgaattcgat gcacgcatcg tcagggtcac ggcaggcgtc
      121 ggcgcgcggg gctacttccg aaccttggga tacgacctgc tgacgccgta catggtcaag
      181 gcgctgtgat caagaaactt ccttgatcca tccgaggcgt cggagcttgc tcgcctcgac
      241 gtcggccgcg ttgcgaaacg acgactcggc ctccgcgagg tagtcgaccg ccagacgcag
      301 cccttccttc gtcggcgccc tcacgtcgac gccggcgcgc gtgagttgct ggcggacgat
      361 cggcatggcg gcttcctggc ctcccatgaa ttcgcagaaa tccacgatga tctgatcggt
      421 gacggcgatg aacggattcc aggtctcctc gaccgcttcc cccttcccga ccttcgcgtc
      481 cgccttcgcg atcatcgcct tcgcgagacc gaggaatccc gcttcgacgt tgagtccggt
      541 cttcgcagag ctcacgaagc cgtccacctg gagcgtgtct ttcagatcat ccagctgttc
      601 ctggaccgat cgacgggatt cggcgagatc cactttgttc gcgacgagga cgagcggaat
      661 cgggtccgtg acggagagga gatgcgggat ccagtactca tgcagactct cggccgtctc
      721 cgagcgcgtc acgtcgtaga cgaggagcgc gcctttcgcc ccttggaagg agctctcctg
      781 gacgccgcgg tacccttttt gtccgaggac gtcccagatc atgaacgtca tgtccgtcgc
      841 cttgcccggc gactcgatcc gcaggtcctt cttcgtgact ttcgtgccga tcgtcgtgat
      901 gtattcgtcc gaaaacttgt cgaccacgaa gcgccggatc aggctcgtct tgcccacggc
      961 gccgtcgccg aggagcaaga tctttcgctt gacgtggtca tcgaccatgg cgacattgct
     1021 ccatgcgggc gccactcata taacgcttgc tggctcaatg tcagcgatgc gaatggacct
     1081 tcagttcgca tgaaaccgga gccgcggacg gatgaagcgc gccgcgatca gatccgcttg
     1141 cgggagcagt gccacgttcc cgtcccactt cgcaaggatg tccgcgtggg accgttcgaa
     1201 ctcccacacc gcgatctgga gtttccgagg gaggctgttc aggtggcggc ccacaatcac
     1261 cgcggcgagg accgtgtgct ggccccggag catcaggact tggcgttgac cgaaccgcag
     1321 ttgttcgagc gtcccgcccc ggtcgtcgaa cgagtcgcga acgaactcct ggagcacgat
     1381 cagcatccca ctcatgatgt cgctgtcgtg gaccatgccc tgcgtgcggg accagtggcg
     1441 gatcaacatg ccgctgtcgt gcatcaggta gagctcctcg agacgcgcgc gtcgggtcac
     1501 gtagacgccg agcccgatca cgcccgcggc gccgaatccc gcagccgccg cccagaacgg
     1561 attcacggga gcggcagggg ggctgtactt caccgcgaag gtgagcgacc gataaatcgt
     1621 ccgaggattc tgatcgaaat tatcggtgta cgtcacggtg acgtcgaccg tcgtgaagac
     1681 gggactcgcg gtctgcgacg tctcggtcgt gttcgcgtag aaccaccagt ctccgatccg
     1741 attgtgagtg acatcggtgt aggtgccacc cgcctgctgc ccgtacgcca gttcgggacc
     1801 gaagaccgcg gtgatgctaa tcgtcgcggc catcgtatcg ctgtagctcg cattgttcgg
     1861 atacggcgag tccaaccaga acgtgaagtc cacgtcgggt gcatgggaat cgttgaggat
     1921 gaccgcgagc tgataatacg aacggcgagg gaccgcagcc gcgagcgaca cagtgagcgt
     1981 gagtgcgagg agaacgagca cgacggcggg gatgtaacgt ggtacgcgcg ccgttcgatt
     2041 ttgcactggt tggagccccc ccaaccgatt gtccgccacg cggacgccga ccggcgcgac
     2101 cattcgtggg gggtctattt aatcttacta tggatgcgtc acatcgtgca ccaacggacg
     2161 cttcgtgatt ctcacaaacg cgattgaacg agggcggcca cctccggtga cggtccggac
     2221 ttcagaagag tgctcggatg cctgcgcctt cggccggaga ccggtgtgcg acccgagccc
     2281 acgttgccgg gaggccgagc atcatggccg catctcggag cattgtgcgt gagagggtca
     2341 tacctcgcgc aaccgcaagg atcgggaagg atacgtcaag cccccgaagg acggtggcca
     2401 tctcaccacc gagccgcggc ggtccgaatc cggaaagcat gggaccacca tcctcagtct
     2461 cgagagcggc atggagcggc acgaggttgt cgatgtcacg tcgaggcaat ttcggatgcg
     2521 cggtcgcgat ctgtgtccga atccgaatcg cgtccgcgcg actcaggatg acatactcga
     2581 cgcgatagtc gagatgggcc ttcgccgccc tggcggcttg gatgtcgggt gagccttcga
     2641 cgccggagac cacgcacacc aaggcgcacc gttttctcgc gatcatcgcg aggagggtac
     2701 tcgagagccc acccgagtac gcgagcgcac tccgcgaccg tccttcgact tcgcgcgcaa
     2761 cccgacgttc gagtcggcga acgaacgcgt cgacgtcgcg cgacgacacc atcggctcac
     2821 gcgccgaacg tgacttcgcc cgcgaggagt cggtcgagcg tttccgtgag gtccgcctcc
     2881 gccacccgga tctgtttttg cgaatctcgc tcgcggaccg tgacgccttt cccttcgagg
     2941 gtctcgtggt cgaccgtgac ggagaacggt gtgccgatct cgtccatgcg ggcgtaccgt
     3001 cggccgatcg atccggactc gtcgtacgac accgtgagcc gtctcttcag gttcacgtgg
     3061 agggcctcgg ccttctccgg cagtccgtct ttgctcacga gcggaaagac gccgacgctc
     3121 accggagcga ttcggggcgg gagccgcagg acgacgcgct cgcccttgct gtacgacagg
     3181 tccagcaacg cccagatgtt tcggtccacc ccgaacgaca gctcgaggac atgggggatg
     3241 agcttcgaac cgccaaacgt cacggattgt ttcacatggg acaccgcctc gtggcctttg
     3301 aggtcgtggt ctgtccgata gtggacgcct ccgacctcct tgaaaccgcc cagggtttct
     3361 tgcttcacct ggatgtcgaa gtggatcttg ttgtaaaacg cgcgctcctt ttcatcgagt
     3421 tccacaaatc ggaatgcgtc ccgcgggacg cggagtccct ccaggtagaa ccgctggacc
     3481 gcggcgaggt gatagacata ccaaggcggg aggtcgcgcg cgacgaggtc tctcgccgga
     3541 aggtcgtggg cgccgggctg gtttttctcc gccgcccacg caatgcggat cggcgtggac
     3601 gcgaccgcct cgaatcgcag gccgtccgcg aaggtcgcgg gatcgaagaa gatctggagc
     3661 tcggcctgga gaaactcccg catgcggtat gcgccttgcc gcgggctgat ctcgtttcgg
     3721 tacgctcgcc cgatgatcgc gaggcccaac ggaagtctcc ggcggagcgc ctcgaactcc
     3781 cgtttgaagt tcaagaaaac gccctgagcg gtctcgggcc tcaggtacgc gcggtctttg
     3841 ccggtcggcc cgacctcgag cgggaacatc atgttgaagg gcctcgccgg accgagttcg
     3901 cctttgcagt tcgggcatcg gatcttcagt tcgcggatgc gcgcgtcgat ctcggcgggc
     3961 gtcagtccct cgtgttcttc gtgggtcgcg gcctcgagca gctggtctcc gcggtacgat
     4021 tcgccgcacc gggtgcacgt gacgaggatg tccgtgaagt gatccacgtg gccggaggcc
     4081 ttgagggccg gctccggaag gatcgtcgtc gtgtcgatca ggtggtagtc gtcgctgagt
     4141 ccgaggaagg tctcgatcca caggtcttcc catcggcgcc gcatcaacac accgttgtgg
     4201 ccatagtcgt agaaacccgc gaagcctcca tagagatcga ccgcgggcca caggaacccg
     4261 cgacggatgg acagggacat cacgtcatcg taggaggcca tcgccgccag aaagtgaggc
     4321 gttcggataa aggatggggt gcacgccgat tcttcatcgg gccgaacccg cgacgcggcg
     4381 ccgtcgtcct cgaatcatcg atgcgtctcg caccgacgga ctcggcgccg gccagagccg
     4441 tcctcccgag acgacgagtc ggacatcgct cgcggaggct cgcacgatgg acgcaaatcc
     4501 gttgcgtcca cccgggagat ccaggatgac cagatcggca cgcgctccga cgcgaatcgc
     4561 cgacgtggca tgcgggtcgg cgagacggcg tccgcgcaac gccatctcga ggatctcgcg
     4621 cgccgggaca ccacctttca tccgcgcgac ccggtaggcg aattccattt cccgcaacag
     4681 ggagggcgtg ttgatcatgg cgttatccgt ccccaggtga agctcaaccc caagtcgcag
     4741 catgcgcggg atgtccggtg tcatcccaaa gaacgcgttc gaccgcggac acaccacgat
     4801 cggcacgcct gcatcggcgc agcgctcgag gtctccgtcc gtcgcgcgga ccatgtggac
     4861 gaggaatgcg ggtttcagat cgaggaccgc atcgatctcc tcgcgcactc gttcggaaca
     4921 gtggatcgcg aagattttct tcgcccgtcg cgcgtctgcc gccagcttct cgatcgcatc
     4981 gcgcggccaa tcgatgtatg agctcaccgc gatcccgtcc gcggcccgca agatcgcccc
     5041 cacttctcgt ggattgtagg acagcccgac gggccgtgcg agggcgagac cttgcaaggg
     5101 caacgccgca acggcggcgt agagcaattt gagtccaacg agccctcctt cccggaagtc
     5161 ggagaacccc gtggtcccgg tccggatcat cgtcgccatg gcacgtcgca tcgcggcgat
     5221 gaccgcggcg tccttcgcct tcgcgaggac ccgatgcttg agcccgtgcg gcggggcgac
     5281 gagctcctcg attgtccctt tcagttcctg cgtcacgatc gcgtcgccga ggtgcgtgtg
     5341 cgcgttccac aaacccggga ggatgaggcc ttccgcgagc ggacgacgcg cgcgtccgga
     5401 ccggatctcc acgacgacat cctcttccca tccgacggtc ccctctcgga agcgtcggcc
     5461 gtcgtag
//
LOCUS       DATLMA010000286         2142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_872076, whole genome shotgun sequence.
ACCESSION   DATLMA010000286 DATLMA010000000
VERSION     DATLMA010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_872076"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VNA10_03650"
     CDS             <1..449
                     /locus_tag="VNA10_03650"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HVG36805.1"
                     /translation="IIRFLGRDAPVTLAEEERWFRDYERRTDEQIFAIEVEGQHVGNL
                     GLHKIDRVHRKAEVGIVIGEPSFWSHGYGTEAMRVVLRYGFEGLGLNKISLDVLEYNT
                     RALRTYERLGFQREGVHREDIYKDGRFVNVMRMSILARELREGPAA"
     gene            complement(456..1535)
                     /locus_tag="VNA10_03655"
     CDS             complement(456..1535)
                     /locus_tag="VNA10_03655"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HVG36806.1"
                     /translation="MRRIFRNVNDGLDLIVFLNSTEPHIDRSFFYATGLTDGLFEGCG
                     AWLTPDGGCEITTSALEEEAAKKSGLPLHVFQTRDESTRRIKAALKGHRKVGINASEL
                     TQAAFERLKKQASKSTRFVDVSEAVMKTRLVKDAQEIERIQRACDIATKSFEETLPFV
                     RSGVTEAEVASELVYRMQKNGATGPSFHTIVGSGPNGAEPHYTAGERKIERGDMIVID
                     FGAVYHMYCSDVTRTVVVGSASEEQRRMHGTVARAQAAALARMRPGSKAKSVDAAARD
                     VIDRTKYKGRFIHGLGHSIGLAVHDGGALNASSDLVLRPNMIFTDEPGVYVPGFGGVR
                     IEDDVLITKGSPRYMSTTPRDLLEL"
     gene            1636..1977
                     /locus_tag="VNA10_03660"
     CDS             1636..1977
                     /locus_tag="VNA10_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013413254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36807.1"
                     /translation="MAKRRHRGMERRIALERMTTLFRLAEGEALQRHAGRARRYVELA
                     RRIGMRYNVRVPSPFKRSFCKKCLAFLLPSVSARVRVGRGRVVVTCTTCGAVQRYPYR
                     REQVARRASRG"
BASE COUNT          360 a          709 c          703 g          370 t
ORIGIN      
        1 agatcatccg gttcctcggg cgggacgccc cggtgacgct cgcggaggaa gaacgctggt
       61 tccgcgacta cgaacggcgg acggacgaac agattttcgc gatcgaggtc gaaggccagc
      121 acgtcgggaa ccttgggctg cacaagatcg accgcgtcca ccgcaaagcg gaagtcggga
      181 tcgtgatcgg agagccgtcg ttctggtccc acggctatgg caccgaggcg atgcgcgtcg
      241 tcctgcggta cggcttcgag gggctgggcc tcaacaagat ctcgctcgac gtgctcgagt
      301 acaacacgag ggccctccgg acgtacgagc gcctcgggtt ccagcgagaa ggcgtgcacc
      361 gcgaggacat ctacaaggac ggacgcttcg tgaacgtcat gcggatgagc atcctcgcgc
      421 gcgaacttcg cgaaggaccg gccgcctgaa cgcgctcaga gttccaacag gtcccgcggc
      481 gtcgtgctca tgtatcgagg actacccttc gtgatgagga cgtcgtcttc gatgcgcacg
      541 cccccgaatc cggggacgta cactcccggt tcatccgtga agatcatgtt cggacggagc
      601 acgaggtcgc tcgacgcgtt cagcgcaccg ccgtcgtgga ccgcaagccc gatcgaatgt
      661 ccgagtccgt ggatgaaccg ccccttgtac ttcgtccggt cgatcacatc cctcgcggcc
      721 gcatcgaccg acttcgcctt cgaaccgggt ctcatgcgcg cgagcgccgc ggcctgggcc
      781 cgggcaacgg tgccgtgcat gcggcgctgc tcctcggacg cggagcccac gacgacggtc
      841 cgcgtgacgt cggagcagta catgtggtac accgccccga agtcgatcac gatcatgtcc
      901 ccgcgctcga tcttccgctc gccggccgtg taatgcggct ccgccccgtt cggaccggac
      961 ccgacgatcg tgtggaacga gggaccggtg gccccgttct tttgcatccg gtacacgagc
     1021 tcggaggcca cttcggcctc ggtgacgccg gatcggacga acggcaacgt ttcctcgaag
     1081 gatttcgtcg cgatgtcgca cgccctctgg atccgctcga tctcctgtgc atccttcacg
     1141 agccgggtct tcatgaccgc ctcggagacg tcgacgaacc gcgtcgactt ggacgcctgt
     1201 ttcttgagtc gctcgaacgc ggcctgggtc agctcggacg cgttgatccc gactttccga
     1261 tggcccttga gagcggcctt gatgcggcgg gtcgactcgt cgcgagtctg gaacacgtgg
     1321 agcgggaggc cgctcttctt cgcggcttcc tcttccaacg ccgacgtcgt gatctcgcag
     1381 ccgccgtccg gcgtgagcca ggcgccgcag ccctcgaaca gtccatccgt caaaccggtc
     1441 gcgtagaaga acgagcggtc gatgtgcggc tcggtcgaat tgaggaagac gatcaggtcc
     1501 aggccgtcgt tcacgttgcg gaaaatgcgc cgcacgcggt cgcgcacgag aatcccccgc
     1561 gcgtaaccga gcgagtctag ttaaaggttc gtcgcccggg aaggatttta tcctccggac
     1621 cggctgcgca acccgatggc gaagcgacgc caccgcggca tggagcggcg gatcgccctg
     1681 gaacggatga cgacgctctt ccgcctggcc gagggcgagg cgctccagcg ccatgcaggc
     1741 cgggcgcgac ggtacgtgga gctcgcgcgt cggatcggga tgcgctacaa cgtccgggtg
     1801 ccctcgccgt tcaagcggtc gttctgcaag aagtgcctcg cgttcctcct gccatcggtg
     1861 agcgcccggg tccgcgtggg acggggccgg gtcgtcgtca cgtgcaccac ctgcggcgcc
     1921 gtccagcggt atccgtaccg tcgggaacag gtggcgcgcc gtgcgtcccg aggctagtac
     1981 gacgtcgtca tgtcgatctt gcccgccttc cgggcgaggt attccccggc cttgaagacg
     2041 gcgatgctca gcccgaagaa cgctacgctc gagatcgcga ggaacgcgag gatcgtgaga
     2101 tcgctgaaac cgccgaggcc ggtctggatc ccctgcaact cc
//
LOCUS       DATLMA010000287         3808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_449074, whole genome shotgun sequence.
ACCESSION   DATLMA010000287 DATLMA010000000
VERSION     DATLMA010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449074"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            475..3102
                     /locus_tag="VNA10_03665"
     CDS             475..3102
                     /locus_tag="VNA10_03665"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HVG36808.1"
                     /translation="MIGVLLAVTFISGTFIAIDSSTRATLDAFLANLPSDMDFEARAS
                     ANGTQVRQTVEGIPGVLRVAVTRFTGIGKVESSAAPGPVSAQVIGVEPNRLPSALEGI
                     SVISGTLSIPRGNVALSEDLAARLNVSAGAIVGLRLSSFQPTDPNAPRVNVTIAAVFR
                     GVRVGGGPVFPPLAIVHVEDAAWYEEQLGYQYVGNGLTGEIRIDRAQVLDPYDIQASL
                     GRLALLDRQINTALGLFAGHVTSNNVPLALDNFASALVVQRIFYLGLSAPVLLLGLYL
                     GAIGIDLSHAERRRELAVLKTRGASRDQTLSLLLLEAALGGVIAALIGLAAGVGLSRF
                     LLAFVSLFGTASAPQYELVVLSPTTVATVAGLSVLFMAATSYRSARRTADLPIVETLR
                     YYAPGETRIRYRSSWDALLVTLAVLTYGMVVYSREIQADFVTFLIGPLFVVLLPLAPI
                     FLIVGSSRLLTRSTSKVYEAAARVTRPFAKNLHHVITRNLQRNPRRAANVAVIIALGL
                     AFGMFTLVIFSSQLAYQEGQLRAAIGGDIAIGAPPSDPGFEASVRALPEVAGVTLVRR
                     VYAVPANPFPYGDLYELDPATYLSTTNPQPWYFHDFDRAEVQRVLASPNEVLVTEGYL
                     NKALLTVGDVLPLRRDMRSDPVNPVIGGTVRGLPGTSAVGSGVPLAIYGSHETLKALV
                     DLGGAGNTDPVRYLVALRAGADWQGAKEELRVLGASDIRVAEEEVQQLRSAPLFRAFF
                     GFMELEMAFMVVILTAGLGLILYAATLEREVELAAIRSRGASGWQTAGLLIGEASSIM
                     IVGLLVGAGVGVLSAYLSTTMVASGSGESLVPLFLIVPVASLLLLAAAPVAMIITSFF
                     VSLRVVRMDVGRVLKLRGG"
     gene            3105..3785
                     /locus_tag="VNA10_03670"
     CDS             3105..3785
                     /locus_tag="VNA10_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013467854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36809.1"
                     /translation="MPKIVTKDLIKVYRTGKSEVIALRGLDMQVDDGELIAVRGPSGC
                     GKTTLLNILGGIDRPTAGRIEVNGSNLVDLTDGELVRYRLRQTGFVFQFFNLVPTLTA
                     EENIELPMRLASRDGVARKARTKELLDLVGLAHRARHRPDEMSGGEQQRIAIAVALSN
                     DPPLLVADEPTGELDTKTGQEVLNLFQRLNRDLKKTIVVVTHDARVADIAHRTLDIRD
                     GKIVGTAA"
BASE COUNT          665 a         1224 c         1191 g          728 t
ORIGIN      
        1 acgcgaacgc gacgatgcga ctccacatgc ggcgagacac agcattcgct gcaactgctg
       61 attcagaact cacgtgtacc ccttcctgcc cctcaacgga acggactccc ccccggcgaa
      121 tctggcgaac cgccagatgc accggcccaa aggtgcaaga gggattagca tgaggggaga
      181 taagcatgac ggaaaaattc ggtgccggcc cgccttcccc tgcatcggac gtcgcgtaga
      241 cgccgagtcc ggcgtctcga gtaccgccgt gaccgtgcga cccgatcgca gaagcgaatg
      301 cgaacgaaca cggggcgctt ctttgcttcg agaatacacg ggacggccag cgctcccgat
      361 atgtgcttat atgatgcggt tcattgacag ggtgggtcgg aggaatccgc tgtggccttg
      421 attcgctacg cggcaattaa tgtgtttcgc agtcgccggc gaaccatcac cgcgatgatc
      481 ggagtcctgc tggcggtcac gttcatctcg ggcacattca tcgcaatcga ttcgtccacg
      541 cgggcgacgc tcgatgcgtt cctcgcgaat ctcccgtcgg acatggattt cgaagcgcgg
      601 gcctccgcca atggaacgca ggtgcgccag acggtcgagg ggatcccggg ggtcctccgc
      661 gtggccgtca cacgcttcac gggtatcggc aaggtcgaat cgagtgcggc tcccggtccg
      721 gtgagcgctc aggtaattgg ggtggaaccg aatcgcctcc cgtccgccct cgagggaatc
      781 agtgtgatct cgggtacctt gtcgattccg cgaggcaacg ttgcgttgtc cgaggatctc
      841 gcggcccggc taaatgtctc cgcgggggca atcgtgggtc tccgactctc ctcgttccaa
      901 ccgaccgatc cgaatgcccc tcgagtgaat gtgacaatcg cggccgtgtt tcgcggcgtg
      961 cgcgtcgggg gtggtccggt cttcccaccc cttgcgatcg tgcacgttga ggacgcggcc
     1021 tggtatgagg agcaactcgg ctaccagtat gtgggaaacg gactcacggg tgaaattcga
     1081 atcgaccggg cgcaagtgct cgatccgtat gatatccaag cgtctctagg gaggctcgcg
     1141 ttgcttgacc gccagatcaa caccgcgctg ggtctgttcg ccggccacgt gacttccaac
     1201 aacgtccccc tcgccctcga taacttcgca agcgcgctcg tcgtccagcg gatcttctat
     1261 ctgggactat ccgcaccggt cctgctgctt ggcctctacc tgggggcgat tggcatcgac
     1321 ctgagccacg cggagcgacg tcgggagctt gcggtcctga agacccgggg agcatcgcga
     1381 gaccagaccc taagtctcct cctcctggaa gcggccctcg gaggcgtgat cgccgcactc
     1441 atcggcctgg cggcgggcgt cggcctgagt cgcttcctcc tcgccttcgt cagtctcttt
     1501 ggaacggcct ctgccccgca atacgaactc gtcgtcctct cgccgaccac ggtcgcgacc
     1561 gttgccggcc tcagcgtcct cttcatggcg gcgacgagct atcggtctgc gcggcggacg
     1621 gcggacctcc cgatcgtgga aacgcttcga tattacgcgc cgggagagac ccgcatccga
     1681 taccggtctt cttgggacgc actcctcgtc acgctggcgg tcctcaccta cggcatggtc
     1741 gtgtacagtc gggagatcca ggccgacttc gtcaccttcc tgatcggtcc tctcttcgtc
     1801 gtcctcctcc ccttggcgcc gatcttcctc atcgttggct caagccggct cctcacaagg
     1861 tccacgagca aagtatacga ggcggctgcc cgggtgactc ggcccttcgc gaagaacctg
     1921 caccacgtca tcactcggaa tctgcagcga aatccccgac gcgccgcaaa cgtggcggtc
     1981 atcatcgcac tcggcctcgc gttcggaatg ttcaccctcg tgatcttctc ctctcaactg
     2041 gcgtaccagg agggccagct tcgggccgcc atcggcgggg acattgccat tggagcgcct
     2101 ccttccgatc cgggattcga ggcgagtgtc cgggccctcc cggaagtcgc tggagtcacg
     2161 ctcgttcgga gggtgtacgc cgtgcccgca aatccgttcc cctacgggga tctctacgag
     2221 ttggacccgg ccacatatct gtccacaacg aacccacaac cgtggtactt ccacgacttt
     2281 gatcgtgccg aagtgcagcg ggtgctcgcg agtcctaacg aggtcctcgt gacagaaggc
     2341 tatctgaaca aagcgctcct gacggtcggc gatgtgttgc ccctccggag ggacatgcgg
     2401 agcgatccgg tcaacccggt gatcggtggg acggtccgtg ggctccccgg aacctctgcg
     2461 gttggatccg gcgtgccgct ggcgatctac ggaagccacg agacgctcaa ggcgctcgtc
     2521 gacttggggg gggccgggaa caccgacccc gtgcggtacc tcgttgccct ccgtgcaggt
     2581 gcggactggc agggggccaa ggaggaactt cgcgtcctgg gcgcgagcga cattcgggtc
     2641 gccgaggaag aggtccagca gctgcgttcg gcccctctgt tccgggcgtt cttcggattc
     2701 atggaactcg agatggcgtt catggtcgtg atcctcacgg cgggactcgg gctcatcctg
     2761 tacgccgcaa ccctcgagag ggaggtcgaa ctcgcggcca tccgatcgcg cggtgccagc
     2821 ggatggcaga ccgccggact cttgatcggc gaggcatcat cgatcatgat cgtcggattg
     2881 ttggtcgggg cgggagtggg cgtcctctct gcgtacctct ccacgacgat ggtcgcctcg
     2941 ggttccgggg agagcctggt gccccttttc ctgatcgtgc cggtggcgtc gctcctgctc
     3001 ctcgccgccg caccggtcgc gatgatcatc acgtccttct tcgtctcgct tcgagtcgtg
     3061 cgaatggacg tcggacgcgt gctgaaactt cgaggtggat aaacgtgcca aagatcgtga
     3121 cgaaggattt gatcaaagtc tatcgaacgg ggaaatcgga agtgatcgcg ttgcgcggcc
     3181 tcgacatgca agtcgacgac ggcgaactca tcgcggttcg gggcccttcg gggtgcggca
     3241 agacgaccct cctgaacatc ctcggtggaa tcgaccgccc gaccgcgggt cgaatcgagg
     3301 tgaacggatc gaacctcgtc gacttgaccg acggagaact tgtcaggtat cgattgcgac
     3361 agacgggctt cgtcttccag ttcttcaacc tcgtcccgac gctgacggcc gaggagaaca
     3421 tcgagttgcc gatgcgcctc gcctcaagag acggcgtggc ccgaaaggct cggacgaagg
     3481 aactcctcga tctcgtgggc ctcgcccaca gggcgcgcca tcggccggac gagatgagcg
     3541 gcggagagca acagaggatc gcgatcgcgg tcgccctgtc gaacgatccg cccttgctcg
     3601 tcgcggacga gcccacggga gagctcgaca cgaagaccgg ccaggaggtc ctcaatctgt
     3661 tccagcgact gaatcgggat ctcaagaaga ccattgtggt cgtcacgcac gacgcccggg
     3721 tcgcggacat cgcacatcgc accctcgaca tccgagatgg caagatcgtc gggaccgcgg
     3781 cctaggcgct cgcgcagcgc attgctcg
//
LOCUS       DATLMA010000288         1260 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_691682, whole genome shotgun sequence.
ACCESSION   DATLMA010000288 DATLMA010000000
VERSION     DATLMA010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_691682"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            212..>1260
                     /locus_tag="VNA10_03675"
     CDS             212..>1260
                     /locus_tag="VNA10_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36810.1"
                     /translation="MNKMRMLMAALVVAAMLAVPLGLMGTASAVGGNRDLTPVVIGPV
                     WTDRLGGGDLVAVKAGDALFGVRYGVSNHTNDVVIFAEYKRFLGGAEVVDAQGNYLAT
                     RGIPVYTVFAQSFSRFIEFQQRNVSDGFDLTSVDQLFPVPLTQNVPVKALSLNTAWAL
                     SNQTTEIADGVTYVNFTLSASNLPYTRVLNNTNLGDGMLNRVAFAFHLTVSTHDKTAQ
                     IPWYRVTLSDGLRSEISQVQFIGYRNITGPVIGMGAKYDHLIEGWDFASMRDKLALET
                     HLIIGNYIPDRTADFVHLAYGRDRADDANHTTLGNTTTVNGTAPTRPHLYTFDRVYFD
                     DDFTRIGRFVWATSVT"
BASE COUNT          250 a          380 c          398 g          232 t
ORIGIN      
        1 gacgcgacga agttccgcat cgagatggac ttggaactgg aacggcatga gcagggcgtt
       61 cgcgtcgagg agggcgagtc gaggcaccgt tttcgttcat cggtgacgaa ctatatggcg
      121 ttggggtgag aatcggatgg cttcatttaa atactcatca atacatagtg tcgctatgta
      181 catagtgagg ttgtagcgcc tcacacggaa ggtgaacaag atgcggatgt tgatggcggc
      241 tttggtcgtg gccgcgatgc tcgccgtgcc cctcggactg atggggaccg cgagcgcggt
      301 cggcgggaac cgcgacctga cccccgtcgt gatcggaccc gtttggacgg accgactcgg
      361 cggcggcgat ctcgttgcgg tgaaggcggg cgacgccctc tttggcgtac gatacggcgt
      421 gagcaatcac acgaacgacg tcgtgatctt cgcggaatac aagcgcttcc tcggcggggc
      481 cgaagtcgtc gacgcccaag ggaactatct cgcgacccgc ggaatcccgg tgtacacggt
      541 cttcgcgcag agcttcagcc ggttcattga attccagcag cgcaatgtga gcgacggatt
      601 cgacttgacg agcgtggatc agctgttccc ggtcccgctc acgcagaacg tgccggtcaa
      661 ggccctctcc ctgaacaccg catgggctct gtccaaccag acgacggaaa tcgccgacgg
      721 cgtgacgtac gtgaacttca cgctctcggc gagtaacctg ccctatacgc gggtcctgaa
      781 caacacgaac cttggggacg ggatgctgaa ccgagtcgcg ttcgcgttcc acctcacggt
      841 ctccacgcac gacaagaccg cgcagatccc gtggtaccgg gttacgctct cggacgggct
      901 ccggagcgag atctctcagg tgcagttcat cgggtaccgg aacatcaccg ggccggtcat
      961 cgggatgggc gcgaagtacg accacctgat cgagggctgg gacttcgcct cgatgcgaga
     1021 caagctcgcc ctggagaccc acctgatcat cgggaactac atccccgacc gcaccgcgga
     1081 cttcgtgcat ctcgcatacg ggcgtgatcg ggcggacgac gcgaaccaca ccacactcgg
     1141 gaacacgacc accgtgaatg gcacggcgcc tacccggccg cacctgtaca cgtttgatcg
     1201 cgtgtacttc gacgatgact tcacgcggat tggtcggttc gtctgggcga cgagcgtcac
//
LOCUS       DATLMA010000289         2268 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_148953, whole genome shotgun sequence.
ACCESSION   DATLMA010000289 DATLMA010000000
VERSION     DATLMA010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148953"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..1402
                     /locus_tag="VNA10_03680"
                     /pseudo
     CDS             14..1402
                     /locus_tag="VNA10_03680"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
     gene            complement(1410..1808)
                     /locus_tag="VNA10_03685"
     CDS             complement(1410..1808)
                     /locus_tag="VNA10_03685"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HVG36811.1"
                     /translation="MPYRRVKDPTEVVVIFKTHLRKGADSEAYAKTSRRMRELVEQIP
                     GFISIKAYTGEDGEEIDLIHFVNEDALAMWKEQPEHREAQRRGREEFYDRYSVQACKV
                     VRDYEFRIEDLERGPDADRVRNKAQGRSTR"
     gene            complement(1879..>2268)
                     /locus_tag="VNA10_03690"
     CDS             complement(1879..>2268)
                     /locus_tag="VNA10_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020400109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 domain-containing protein"
                     /protein_id="HVG36812.1"
                     /translation="PLAEKLGIKAGFVVVVIDPPKDYRRLLGRLPDRVTIRTRLDARI
                     NMIHAFVRDRSGLEASFDRWKGAILSDGSLWISWPKQSAGVPTDLTEDVIRSLALAHG
                     LVDVKVCAVDETWSGLKLVYRLADRGS"
BASE COUNT          436 a          717 c          723 g          392 t
ORIGIN      
        1 cgcgacgttt cccttggcca ccaacgagga gctgaaccag gcggttggcc acgccaaaga
       61 agccttcgag cgctggaaga agacgcctgc gccgcggcgc ggagagctgc tgctggaggc
      121 cgcccgcatc ttccgacgga agaaagagga cctcgcgcgc accgtgacca cggaaatggg
      181 caaggtcatc gcggaaggcc gcggcgacgt tcaggaggtc atcgacttct acgaatacgc
      241 ggccggcgag ggtcgccgga tgttcgggga gacggtgccg tccgagcttc cgaacaagat
      301 gtgtcttacg acgcgcctcc cggtcggacc ggttggcctg atcacgccct agaatttccc
      361 gatggcaatc ccggcctgga agagcggggc cgccctgatc gccggttgct cgttcgtcct
      421 gaagccttcg agcctcacgc ccctctgtgc cgcgagattc gtcgaggtgc tcgacgaagc
      481 gggctttccg gccggggtcg tgaacctcgt gacgggaacc ggctcggtcg tcggcgacgg
      541 tctcgtggcc catccggaca tccgcgcgat ctccttcacg ggcggcgtcg acaccggcaa
      601 gcacgtgtac gagagcgccg cgaagaagat gatcaaggtc ggactcgagc tcggcggcaa
      661 gaacccgatc atcgcgatgg acgacgcgaa cctcgaactc ttgatggacg gcgtcatgtt
      721 cggcgcgttc gggacggctg ggcaacggtg cacggcggcg tcgcgtctga ttgtgcacca
      781 gaaaatctac gacgatgtgg tcgacgaact cgtcgagcgg gccgagaagc tccgggtcgg
      841 caacccgatc gacgagaata cggacatggg ccccgtcgcc tccgcagacc aacagaagaa
      901 ggtcttggag tacatcgaca tcggcaagaa ggaaggcgac aagctcctga cgggcggcaa
      961 gaagctaacg gggggttcgt acgaccgcgg attcttcatc tcccccacgg tcttcgcggt
     1021 ggaccgaaag aagcgcctgg ctctcgagga aatcttcggg ccggtgttga gcgtcctcaa
     1081 ggcgaaagac tacgaagacg cggtcgcgat cgcgaactcc gtcaagtacg gactcagttc
     1141 ctcgatctac acgaacgacc tccggtgggc gttccgggcg atgcacgaac tcgaagccgg
     1201 gatcacctac gtgaatgcgc caacgatcgg cgcggaggtc caactgccgt tcggcgggac
     1261 gaaggagacc ggcccgacgg acacccggga agccggcacg acggccctgg aggagttcat
     1321 gtactggaag acggtctacg tcgactactc aggccgcctc cagagagccc agatcgacac
     1381 ggaaaagctc gccggcagct aggtccggat catcgcgttg aacggccttg ggccttgttt
     1441 cgaacgcggt cggcgtccgg acctcgctcg agatcctcaa tccggaactc atagtcgcgg
     1501 actaccttgc aagcttggac ggaatatcga tcgtagaact cttcgcggcc gcgtcgttgg
     1561 gcttcgcgat gttccggctg ctccttccac atcgctagtg catcctcgtt gacgaagtgg
     1621 atcaagtcga tctcttcgcc atcctcgccg gtgtacgcct tgatcgagat gaatccgggg
     1681 atctgctcga cgagctcacg catgcggcgc gaggtcttcg cgtacgcctc cgagtccgcg
     1741 cccttccgca gatgggtctt gaagatcacg acgacttccg tcgggtcttt gacacggcga
     1801 tatggcacgc ctctccgctc ccgggccgtc ccagcctcgc acggggagct ttgctcgagc
     1861 gtttgtcctt tgcggccctc atgagccgcg gtccgccaag cggtagacga gcttgagtcc
     1921 ggaccaggtt tcgtcgacgg cgcacacttt cacatcgacg agtccgtgcg ccagcgcgag
     1981 cgagcggatg acgtcctccg tcaggtccgt cggaactccc gccgattgct tcggccaaga
     2041 aatccacaga ctcccatccg aaaggatcgc tcccttccat cgatcgaacg aagcctccag
     2101 gccggaacga tctcgaacga aggcgtgaat catgttgatc cgagcgtcca gccgcgtccg
     2161 gatcgtgacg cggtcgggca gccgacccag gagacgccgg tagtccttcg gcggatcgat
     2221 cacgaccacg acgaagccgg ccttgattcc gagtttctcg gccagcgg
//
LOCUS       DATLMA010000290         1072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_573114, whole genome shotgun sequence.
ACCESSION   DATLMA010000290 DATLMA010000000
VERSION     DATLMA010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573114"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1072
                     /locus_tag="VNA10_03695"
     CDS             <1..>1072
                     /locus_tag="VNA10_03695"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG36813.1"
                     /translation="IMASADIVVIGAGHNGLVAANYLAKAGLRVTVVERSDRVGGACV
                     TDEIAPGFKVSAAAYVSGLFRPQIIEDLELAKFGLRQVAFDPQGFCPFPDGKYLMLWS
                     DGEKTAKEIAKFSKKDAAAYPKYEAMWAEVYDLVEPMLLAPPVPIAELVSLLRGPEAE
                     DLLRRLLFYSAEELLDEYFESDEVKAAFANESVIGHFSGPSAPGTAFTLAHNLLGNID
                     GQVGGWGLVLGGMGALPDALAAAARARGVEILLRSPVERIRVGGGRAVGVRFEGGRTI
                     DAKAVVSTADPKRTFLHMLEPDQLPAEFRRAVGAIKMHGAAMKVNCALSELPRWNAAD
                     ATPGPQHRGSTYIGPSIEYVEDA"
BASE COUNT          187 a          341 c          363 g          181 t
ORIGIN      
        1 caatcatggc ctcggcggat atcgtcgtca tcggtgcggg ccacaatggc ctcgtcgcgg
       61 cgaactatct cgccaaggcc ggtctccggg tcacggtcgt cgagcggtcg gatcgcgtcg
      121 gcggcgcgtg cgtgacggac gagatcgcgc ccggattcaa ggtcagcgcc gccgcctacg
      181 tatccggact ctttcggccg caaatcatcg aagacctcga gctcgcgaag ttcgggctga
      241 gacaggtggc cttcgatccg caaggtttct gccccttccc cgatggaaaa tatctcatgc
      301 tctggtccga cggggagaag accgcgaagg agatcgcgaa gttctcgaag aaagatgccg
      361 cggcgtatcc gaagtacgag gcgatgtggg ccgaggtcta tgatctcgtc gagccgatgc
      421 tgctcgctcc gcccgtcccg attgccgaac tcgtctcact cctgcggggc ccggaagcgg
      481 aagacctcct gcggcgcctg ctcttctaca gcgcggaaga actgctcgac gagtacttcg
      541 agtcggacga ggtgaaggcc gcgttcgcga acgaaagtgt gatcggccat ttctccgggc
      601 cgtcggcccc ggggaccgcg tttaccctcg cgcacaatct cctcgggaac atcgatggcc
      661 aggtcggcgg gtgggggctc gtcctcggcg ggatgggcgc gttgcccgat gccctggccg
      721 ccgcggcgcg ggcccggggc gtcgagatcc tcctccgctc tcccgtggaa cggatccggg
      781 tcggaggcgg acgcgcggtc ggggtgcggt tcgaaggagg acgaacgatc gacgcgaaag
      841 ccgtcgtctc caccgcggat ccgaagcgca cgttcctgca tatgctggaa cccgaccaac
      901 tgccggcgga gttccgcagg gccgtaggcg caatcaagat gcacggagcc gcgatgaagg
      961 tcaactgcgc gctgtccgag ctccctcgtt ggaacgcagc cgatgcgacg ccaggtccgc
     1021 aacatcgggg aagcacctac atcggaccgt cgatcgagta cgtcgaggat gc
//
LOCUS       DATLMA010000291         4525 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_272827, whole genome shotgun sequence.
ACCESSION   DATLMA010000291 DATLMA010000000
VERSION     DATLMA010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4525
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272827"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VNA10_03700"
     CDS             complement(<1..203)
                     /locus_tag="VNA10_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36814.1"
                     /translation="MNRLAVAGLAMTVAGLLLVVGFWPLTSVSGADLLASKNGNQYSG
                     YTQGSQITVHERVIDVTFTNFFGT"
     gene            complement(318..1616)
                     /locus_tag="VNA10_03705"
     CDS             complement(318..1616)
                     /locus_tag="VNA10_03705"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HVG36815.1"
                     /translation="MDLILGLLIIFVSARAAGEVMEKLHQSPMIGEVLAGILVGPMVL
                     GLINPDPTTSFGGSLNVVANLGVFILVLLAGIELGREGLRKAFKERSMVVAFVEFFLP
                     FSLGYSFAAALGLTFAQSLFLGTALAVTALPVSVRILLDLNLLNSRLGRAIVSVALVN
                     DLVAFAMLGLVVQFTSLGASTPEGLTIGLVALNNVLFIGLVFCVATILKLTTRLGRNS
                     ESYMQTFVSKLRGQEASFALCISTALGLGAAAELLGIHFAVGAFYGGLLMTPQLLGQV
                     QFNRVRNAVSSVTFGLFAPVFFAFVGLKFSISFGAWPLIVAITAIAFIGKLMGGLMGG
                     FVAGFRGAPLVALGVGLNARGMMELLLAQVGLATGIIDTSLYSALVVMTLTTTLCTPP
                     LLKRLLRRFKVDDILPPVPGLVAVGGIGSSNLRPSDETTR"
     gene            1702..2523
                     /locus_tag="VNA10_03710"
     CDS             1702..2523
                     /locus_tag="VNA10_03710"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HVG36816.1"
                     /translation="MALKDKLRVGCSGWGYDDWLGGFYPPATPKSEYLKLYSSVFDCV
                     EVDSSFYRNPGPAMTKGWYKSTPPAFLFAMKMPKRITHEKKLKGVAENLGWFYASAKE
                     LREKCGPLVAQLPPSIKFDSHWTVMQEFLRALEVDKYPHAVEFRHKSWFREDVYKLLR
                     DRNIAMVWSENQYLRTPTDVTADQVYLRMVGDREITEFKEVKKDKSAEMRTWYKELEE
                     SSDSVKGALVFFNNHYAGFGPGSVNEFRRLAGMMEYQFPAAKSGAGGQKGLADFG"
     gene            2607..3062
                     /locus_tag="VNA10_03715"
     CDS             2607..3062
                     /locus_tag="VNA10_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020014774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG36817.1"
                     /translation="MATKTQIVFDCTDPDRLAKFWAEALHYKLQDPPAGFATWESALK
                     AWNVPKEEWNSASAIVDPEGRGPRIYFQQMDTPKPGKNRLHFDLNVSGGPAVSLSTRK
                     SQVDQEVDRILGLGATKQKVWDVPPRSKAELGEYWVVMQDPEGNEFCVQ"
     gene            3124..4200
                     /gene="dinB"
                     /locus_tag="VNA10_03720"
     CDS             3124..4200
                     /gene="dinB"
                     /locus_tag="VNA10_03720"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HVG36818.1"
                     /translation="MARVIFHVDMDAFYVSVERRENPDLVGKPVIVGADPKEGRGRGV
                     VMAASYEARQLGVRSGMPISMAWHKLPQATYLRPNYDLYAAASESVIDVLRSHAGILE
                     HVSIDEAFLDVSSKVNGFDDAADYARRVKAAVKEREGLACTIGVGPNKSVAKMASDLA
                     KPDGLKVVRPEEVNAFLNPLPVTRISGVGAKTAAMLERVGVRTIGELARFPGAELKKL
                     MGKNSVWLWAIARGIEELPVEERPDPKSISVERTFDKDVSDWPRIESTIRDVAHNVFL
                     RARAQGATFRTVGIKIRFEGFQTHLRERTLASHVLDEKVLADVCVELAKEFAEGSHRF
                     RLIGVRVTKLQRPKTRQPQLTAFE"
     gene            complement(4274..>4525)
                     /locus_tag="VNA10_03725"
     CDS             complement(4274..>4525)
                     /locus_tag="VNA10_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36819.1"
                     /translation="ELVHIRQFREGKQLFPEGFNYPDAPTEIEAYKVCIAEGRRLGMT
                     DRELFKYLKVEWMDQGELRRLARNVGVKASTKPRGRRKR"
BASE COUNT          958 a         1367 c         1439 g          761 t
ORIGIN      
        1 gtcccgaaga aattcgtgaa cgtgacatcg atgacccttt catggaccgt gatctgagac
       61 ccctgcgtgt atccgctgta ctggttcccg ttcttcgatg cgaggagatc cgcgccgctg
      121 accgaggtca agggccagaa gccgacgacg aggaggagcc ctgcgacggt catcgcaaga
      181 ccggccaccg ctagtcgatt catccgaaca tttcctccgg ggatcgaact gctccgatcg
      241 cggccgagcg ccgctcgccc gagtgggcgg gatgagaact gaggcggtta atcaacgtta
      301 tgaacaccac cgagcaccta tcgggtggtc tcatcgctcg gacggaggtt ggaagacccg
      361 attccaccga ctgcgacgag tccgggcacc ggcgggagga tgtcgtcgac cttgaagcgg
      421 cgaagtaagc gcttcaaaag cggcggagtg cacagggtcg tcgtcagggt catgacgacg
      481 agcgcggaat agaggctcgt gtcaatgatc ccggtcgcga ggccgacctg cgcgagcagg
      541 agctccatca ttccccgcgc gttcaggccg actccaaggg cgacgagcgg cgcgccgcgg
      601 aatccggcga cgaatccgcc catgagtcca cccatcaatt tcccaatgaa ggcgatggcc
      661 gtgatcgcga cgatgagggg ccaggcgccg aagctgatgg agaacttcaa tccgacaaac
      721 gcgaagaaca cgggggcaaa cagcccgaac gtgaccgagg acaccgcatt gcggacccga
      781 ttgaactgaa cttggcccag cagctgcggc gtcatcagga ggccgccgta gaaggccccc
      841 accgcgaaat ggatgcccag cagttccgcc gccgcaccga gcccgagggc ggtcgagatg
      901 cacagcgcga acgacgcttc ttgtccgcgg agcttcgata cgaaggtctg catgtacgat
      961 tccgagttgc gacccaggcg cgtcgtcagc ttcaggatgg tcgccacgca gaagaccagt
     1021 ccgatgaaga ggacattgtt cagggccacg aggccaatcg tgagcccttc gggcgtcgag
     1081 gctcccagcg acgtgaactg aacgacgaga cccaacatcg cgaaggcgac gagatcgttc
     1141 accagcgcca ctgaaacgat tgcccgtccc agtctcgaat tcaggaggtt caggtcgagg
     1201 aggatccgga cgctgaccgg aagggcggtg accgccaagg cagtgccgag aaacagggac
     1261 tgcgcaaacg tcaaccccaa ggccgcggcg aagctgtatc caagggagaa cggaaggaag
     1321 aactcgacga aggccacgac catgctccgt tccttgaagg ctttccgcag accttcgcgg
     1381 ccgagttcga ttcccgcgag gagcacgagg atgaacacac cgagattcgc gacgacgttc
     1441 aacgaccccc cgaacgaggt cgtcggatcc ggattgatta ggccgaggac catcggcccg
     1501 acaaggatcc ccgcgagcac ctcgccgatc atcggcgact ggtgtagttt ctccatgacc
     1561 tccccggcgg cacgcgcgga gacgaagata atcagcaagc cgagaatcag gtccacgggg
     1621 cgccccggtc tgggaaccgt gtctacgaag ttagccgcta tttattcatt ctcaagcggt
     1681 tatcctcatt gcgagcttcg gatggcgttg aaggacaagc tgcgcgtcgg ctgcagcggc
     1741 tggggatacg acgattggct cggcggcttc tatccgcccg cgacgccgaa gtcggagtat
     1801 ctgaaactct actcgagcgt cttcgactgt gtcgaggtcg actcttcctt ctatcgcaac
     1861 ccggggcccg cgatgacgaa gggctggtac aagtccacgc cgccggcgtt tctctttgcg
     1921 atgaagatgc cgaagcggat tacccacgag aagaagctca agggcgtcgc ggagaacctg
     1981 ggttggttct acgcatcggc gaaggagctg agggagaagt gcgggccgct ggtcgcccaa
     2041 ctcccgccgt cgatcaagtt tgactcccat tggaccgtga tgcaagaatt ccttcgcgcg
     2101 ctcgaggtcg acaagtatcc gcacgcggtc gaattccgac acaagtcgtg gttccgcgaa
     2161 gatgtgtaca aactcctccg cgatcggaac atcgcgatgg tctggtcgga gaaccagtac
     2221 ctgcgaacgc caacggacgt gaccgcggac caagtgtatc ttcggatggt cggggaccgc
     2281 gagatcacgg aattcaagga ggtcaagaaa gacaagtccg cggagatgcg cacctggtac
     2341 aaagagctcg aggaatcgtc cgactcggtc aaaggcgccc tcgtcttctt caacaaccac
     2401 tatgccgggt tcgggccggg gagcgtcaac gagttccgcc gcctcgcggg gatgatggaa
     2461 taccagttcc ccgcggcgaa gtccggtgcg gggggccaaa agggtctcgc ggatttcggc
     2521 taagcgaaat cactgggtcg attcgccgac ctccctccgt cacgtagata cgccatcggg
     2581 cgatgaggac ggactgggaa acggtcatgg caaccaagac tcaaattgtg tttgactgca
     2641 ccgatccgga tcgcttggcg aaattctggg ccgaagcgct ccattacaag ctgcaggacc
     2701 cgcccgccgg atttgctacg tgggagtcgg cgctgaaggc gtggaacgtg cctaaggagg
     2761 aatggaattc agccagcgcg atcgtcgacc cggaggggcg cggacctagg atctactttc
     2821 agcagatgga taccccgaag cccgggaaga atcgccttca tttcgatctg aacgtcagcg
     2881 ggggacccgc ggtttcgcta agcactcgaa aatcgcaggt cgatcaggag gtcgatcgaa
     2941 tcctcggact gggcgcgaca aagcagaaag tgtgggacgt gcctccccgg tccaaggcgg
     3001 aactcgggga gtactgggtc gtcatgcagg atcccgaggg caacgagttc tgcgtccagt
     3061 gaaacccacg cgcacggaca tgaccgaaac caacctaatg atgaacgatg tccattccga
     3121 ttcgtggcgc gcgtcatctt ccacgtggac atggacgcgt tctatgtgag cgtggagcgg
     3181 cgggaaaatc cggacctcgt ggggaagcca gtcatcgtcg gcgcggatcc gaaggagggc
     3241 cgcgggcgcg gcgtcgtcat ggcggcgagc tacgaggccc ggcagctcgg cgtccggagc
     3301 ggcatgccga ttagcatggc ctggcacaag ctgccccagg cgacctacct ccgaccgaac
     3361 tacgacctgt acgccgccgc gtcggagagc gtcatcgacg tcctcagatc ccacgccggc
     3421 atcctcgagc atgtgagcat cgacgaagca ttcctcgacg tctcgtccaa ggtcaacggt
     3481 ttcgacgatg cggcggacta cgcccgccgc gtgaaggcgg cggtcaagga gcgggagggg
     3541 ctcgcctgca cgatcggcgt cgggcctaac aagtccgtgg cgaagatggc ctcggatctg
     3601 gcgaaaccgg acggcctcaa ggtcgtccga cccgaggagg tcaacgcctt tctgaacccg
     3661 ctgcccgtca cccggatcag cggggtcggt gcgaaaaccg ctgcgatgct cgaacgggtc
     3721 ggggtccgga caatcgggga attagcccgg ttccccggcg ccgagctgaa gaagctcatg
     3781 ggcaagaatt cggtctggct gtgggccatc gctcggggca tcgaggaact gcctgtcgag
     3841 gagcggcccg atccgaagtc gatcagcgtg gaacgaacgt tcgacaagga cgtctcagac
     3901 tggccccgga tcgaatcgac gattcgggac gtggcccaca atgtcttcct ccgagctcgg
     3961 gcccagggag cgacgttccg cacggtcggc atcaagattc ggttcgaggg attccagacc
     4021 cacctgcggg agcggaccct cgcctcccac gtgctcgacg agaaggtcct cgcggacgtg
     4081 tgcgtcgagc tcgcaaaaga gttcgcggaa ggcagtcacc ggttccgcct catcggggtt
     4141 cgggtcacga agctgcagcg gccgaagacg aggcagcccc agctcaccgc cttcgagtag
     4201 tcgcacgagt tatagttaaa taaccataac tcctccgcgc ctcctggcca gaatcagctg
     4261 atccgaagag ggcctaccgt tttctgcggc cacggggctt cgtcgaggct ttgactccaa
     4321 cgttccgggc gagccgacgc aactcgcctt ggtccatcca ctcgactttc aagtacttga
     4381 acagctcccg gtccgtcatc ccgagccgcc gcccttccgc gatgcagacc ttgtacgcct
     4441 cgatctcggt gggcgcatcg gggtaattga agccttccgg gaaaagctgc ttcccttccc
     4501 ggaattggcg gatgtggacg agctc
//
LOCUS       DATLMA010000292         1799 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_872764, whole genome shotgun sequence.
ACCESSION   DATLMA010000292 DATLMA010000000
VERSION     DATLMA010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_872764"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VNA10_03730"
     CDS             <1..427
                     /locus_tag="VNA10_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36820.1"
                     /translation="GRVGSEEWATPDHWVVGGSSGHHASKAATVILAGALALGVFMLT
                     PRPHVFLSNGRFSLSNCDLSTSSQVVRATFTLTNTGHVDGFADVHLNVDGTSATVNEF
                     GVQAGASIPGELTSQLPDCGSHSYSLLLCIPYGGRGSYC"
     gene            complement(484..1320)
                     /locus_tag="VNA10_03735"
     CDS             complement(484..1320)
                     /locus_tag="VNA10_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36821.1"
                     /translation="MRAPALALALLVLAVVLSPPATAEDWGAVGKVNKLISVQASPEL
                     APGDSGRFEFYFNSTYSEPMINVTVDANIYRYATIEESIPVDSSWPYAYPKIAETGTR
                     TWSWTATRVDPGTSRVLNFTIVTAADSRDMPHGSIFSQSSYFIRFSVIFEGNVSGTLT
                     AFRMESRGFFTDALWSQATSANATNPCTPPSCRGNLNLTILGVDGIVPDSAFGVKEPI
                     PRWPFYLLIALAAFFLAFAFLFWVEENPGAYPRVEAWWARTRGRIARTVAPLRRWKRP
                     KV"
     gene            1450..>1799
                     /locus_tag="VNA10_03740"
     CDS             1450..>1799
                     /locus_tag="VNA10_03740"
                     /inference="COORDINATES: protein motif:HMM:NF036708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36822.1"
                     /translation="MIRNLLMERLVDRTMKTVKRGDSILIPVTAEPHFDLAPFRARLE
                     LRLDLPNRRTPRDPRREIRDRLMAAEIPLEHAPRRWERIGDVLVVRLSSEGQSSARAI
                     AEIFGTVLGARTVV"
BASE COUNT          345 a          564 c          557 g          333 t
ORIGIN      
        1 gggaagagtg ggcagcgagg agtgggcaac ccccgaccat tgggttgtgg gcgggtcgtc
       61 cggccaccac gcgagcaagg cggcgaccgt gatcctcgca ggcgcgctgg ccctcggcgt
      121 cttcatgctc acccctcgtc ctcacgtctt cctgtcgaac gggcgattta gcctgtccaa
      181 ttgtgatctc tcgacctcga gccaggtcgt ccgggcgacg ttcacgttga cgaacacggg
      241 ccacgtggat ggcttcgccg acgtccacct gaacgtcgat ggcacatcgg cgacggtaaa
      301 cgaattcggt gttcaagcgg gagcgtccat cccaggggag ctgacgtcac agctgccaga
      361 ttgcgggagc cattcctact cgctcctgct ctgtatcccc tatggagggc gaggaagtta
      421 ctgctgagac ctgatgcgct ttgaacacac agactcttca atccgaacgg ccgagctccg
      481 acgtcacacc ttcggacgct tccagcgccg caacggcgcg acggttcgtg cgattcgccc
      541 gcgagtcctc gcccaccagg cttcgacccg tgggtacgct cccgggttct cctcgaccca
      601 gaacaagaac gcgaaggcca ggaagaacgc cgcgagggcg atcaggaggt agaacggcca
      661 ccgggggatc ggctctttca cgccgaacgc ggagtcgggg acaattccat caacgccgag
      721 gatcgtcaaa ttgagattcc cgcgacaaga cggcggtgtg cacgggtttg tggcgttcgc
      781 gctcgttgcc tgactccaca gagcgtccgt gaagaatcct cgcgattcca tcctaaacgc
      841 cgtcaaggtc ccgctcacgt taccttcgaa gatgaccgaa aaccgaatga aatagctcga
      901 ctgggagaaa atcgatccgt gcggcatgtc ccgactgtcc gcggcggtta cgatcgtgaa
      961 gttcagcacc ctggaggtgc ccggatccac ccgggtggcg gtccagctcc aagtccttgt
     1021 gcccgtctcg gcgatcttgg gatacgcgta cggccaggac gagtcgacgg ggatgctctc
     1081 ctcgatcgtc gcataccgat agatgttcgc atccacggtg acattgatca tcggctcgga
     1141 gtacgtcgaa ttgaagtaga actcgaaccg cccgctgtcc ccgggggcca gttcgggcga
     1201 tgcttggacc gagatgagct tgttcacctt gccgaccgca ccccaatcct ccgcggtcgc
     1261 cggcggagac aagaccacgg cgaggaccag caaggcgagg gccaaggccg gggcccgcat
     1321 gatgcgcgcc gaagcggctt ggtcttcata taggtatcgc ggagtgtatc gcggaacaga
     1381 gtgtatccga gtccgccatc ggttggagcg tctcgcgcag tcgttgtccc gaaagaaaat
     1441 gcggagtcgt tgatccgaaa cttgctgatg gagcgcctcg tcgaccggac gatgaagact
     1501 gtgaagcggg gcgattcgat tctcatcccg gtcacggccg agccgcattt cgatctcgcc
     1561 ccatttcgcg cacgcctcga actacgcctc gatcttccca atcgccgtac gccgcgggat
     1621 ccgcgccgcg agattcgcga tcggctgatg gccgcggaaa ttccgttgga gcatgcgccc
     1681 cgacgatggg agcgcatcgg tgacgtcctc gtcgtccgac tatcttccga agggcaatcg
     1741 agtgcccgag caatcgccga gatattcggg acggtcctcg gcgctcgaac cgtggtcca
//
LOCUS       DATLMA010000293         1614 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_872781, whole genome shotgun sequence.
ACCESSION   DATLMA010000293 DATLMA010000000
VERSION     DATLMA010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_872781"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VNA10_03745"
     CDS             complement(<1..920)
                     /locus_tag="VNA10_03745"
                     /inference="COORDINATES: protein motif:HMM:NF014565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004576 - oligosaccharyl transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STT3 domain-containing protein"
                     /protein_id="HVG36823.1"
                     /translation="MDDGKGWLRTHWRTAAVLILIFGLALFLRVYFVYPLAFQPVPSD
                     CTAIYTLPVSGGSDSYYWDRALCYSFQSGRDIGLDPMLNYPSGVQNPRLPLPPWFALL
                     TGRLLAPLFGNPWTAVMFTWLFSAALFGALTIFPTYALAKEAFGRKAGLISALLLAIS
                     AGHLQRSVAADARSAALTLFFIVSTFYFFLRALKTTNRRRWVDNWFHSSAIRTGFKAF
                     FRENSKSVLYALLAGLCITGTALTWQGWAYVIVILLVWFAAELFLDRFRNEETMGTWI
                     LFTLALATPIVLAFQWYYTRGQIRVWFDVPT"
     gene            1098..1274
                     /locus_tag="VNA10_03750"
     CDS             1098..1274
                     /locus_tag="VNA10_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methytransferase partner Trm112"
                     /protein_id="HVG36824.1"
                     /translation="MKRDLMEILCCPVCKGDLELRVDVEKDEILEGSLFCKHCNHRYE
                     IKDGIPDLLPPDFK"
     gene            complement(1306..>1614)
                     /locus_tag="VNA10_03755"
     CDS             complement(1306..>1614)
                     /locus_tag="VNA10_03755"
                     /inference="COORDINATES: protein motif:HMM:NF015967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF367 domain-containing protein"
                     /protein_id="HVG36825.1"
                     /translation="GLAIVDVSWKRGKFPAVPQARARALPYLLAANPVNYGKPFVLSS
                     VEALAAALVIFGRAEEARTILAKFTWGGQFLTLNREPLDAYANAKDSGAVVHAQSDFI
                     "
BASE COUNT          346 a          471 c          538 g          259 t
ORIGIN      
        1 gtgggcacgt cgaaccacac gcggatctgg ccccgcgtgt agtaccattg aaacgcaagc
       61 acgatcggcg tcgcgagcgc gagcgtgaac agaatccacg tgcccatcgt ttcctcgttc
      121 cggaatcggt cgaggaagag ctcggccgcg aaccagacga gcaggatcac gattacatag
      181 gcccagccct gccaggtgag ggcggtgccg gtgatgcaaa ggcccgcgag gagtgcatac
      241 aagacgctct tcgaattttc ccggaagaac gccttgaatc cggtccggat ggcgctcgag
      301 tggaaccagt tgtccaccca acgccggcga ttcgtggtct tgagcgcacg aaggaagaag
      361 tagaacgtcg agacgatgaa gaagagggtc aaggccgcac tgcgtgcgtc cgctgccaca
      421 ctccgttgca ggtgtcctgc gctgattgcg aggaggagcg cgctgatgag gcccgccttc
      481 cgaccgaacg cctccttggc caaggcgtac gtcgggaaga tcgtgagggc gccaaagagg
      541 gctgcgctga aaagccacgt gaacatgacc gcggtccagg ggttcccgaa caacggcgcg
      601 agcagccgcc cggtgaggag tgcgaaccat ggagggagag gcagtcgcgg attctggacg
      661 ccgctcggat aattcaacat cggatccagc ccgatgtccc gtcccgactg gaaggaatag
      721 cacagggccc gatcccagta gtaggagtcg gatccgccgg aaaccggcag cgtgtagatc
      781 gcggtgcagt ccgaagggac cggttggaag gcgagtgggt agacgaagta gacgcggagg
      841 aagagggcga gcccgaagat taggatgagg accgcggcgg tccgccagtg ggtgcggagc
      901 cagccttttc catcgtccaa gactcgacaa acctccggga gattgcgccc atgatggacc
      961 gcctatatag gcattgtcgg gaatccacgg gagggcgcgg gcctcccgat ggagtgcccc
     1021 gccaagagtc ttttggaacg gaccccgaag gctcgcgcgc gatgggctta agtcggacgc
     1081 cgactttccc gcggtcgatg aagcgagacc tcatggagat cctgtgctgt cccgtctgca
     1141 aaggggacct ggagctccgc gtggacgtcg agaaagacga aatcctcgag ggctcgctct
     1201 tctgcaagca ctgcaaccac cggtacgaga tcaaagacgg gatccccgac ctcttgccgc
     1261 cggacttcaa gtgaatcaac cggaggaccg gatctccaaa tcgcttcaga tgaagtcgct
     1321 ctgagcgtgg actacggcgc cgctatcttt tgcgttcgca tacgcgtcga ggggttcccg
     1381 attcagcgtg aggaactgtc cgccccatgt gaacttcgcg aggatcgtcc gagcctcctc
     1441 ggcgcggccg aagatcacga gggccgcggc caacgcctcg acggaggaca ggacgaacgg
     1501 ctttccatag ttcacgggat tcgccgccaa gaggtacggc aacgcgcggg ccctcgcctg
     1561 gggaactgcg gggaactttc cgcgtttcca ggagacgtcg acgattgcga ggcc
//
LOCUS       DATLMA010000294         3072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_573428, whole genome shotgun sequence.
ACCESSION   DATLMA010000294 DATLMA010000000
VERSION     DATLMA010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573428"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1576
                     /locus_tag="VNA10_03760"
     CDS             167..1576
                     /locus_tag="VNA10_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011277894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HVG36826.1"
                     /translation="MPDALAIRDLHVQFHTRRGIYKALNGVDLALRRGEVLGIAGESG
                     CGKTTLGLAVISLLPRNAAIASGQVVFDNKDLVNLSREYAERAGDRFRPRKHERVLRR
                     VGKAMTQIRGRRISMVFQEPMTSLNPVLSIGFQVAEAVYVHDPALLARRVLAREKATS
                     QDIRDLLTLLQLTHGDEAAVKKFATDRGLVGIEEQVLHIWRRQDIHISRKEKAIRALG
                     GQPMNLFERYVFERVVKTGAVPWQFSRLRLFYWLVRLSLVGLILVFLGRQARRILIKE
                     GYRKAQEVLTSLGIHHAERVVKMYPHELSGGMRQRVVIAIALANNPEIVIMDEPTSAV
                     DVTVQAQILELVKQIRTSVSASFIVISHDLAVLAEVSDRIAIMYAGRIVEVAPTAEIL
                     QKPLHPYTQQLISAIPTLEGKSVEGIKGEVPDMRDPPSGCAFHPRCPFAFEKCNSVVP
                     VDFQQGTDQLVACWLYEGK"
     gene            1578..2888
                     /locus_tag="VNA10_03765"
     CDS             1578..2888
                     /locus_tag="VNA10_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011277893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG36827.1"
                     /translation="MMIAAYGLSKFFPVRGAFRTTTALKAVEDVGLKIQNEQVVGLVG
                     ESGSGKSTIGRCLIRLLNATDGEVLFDIPDSDLAEYEKARAAGATERLDEIADRFSLL
                     RRSSSELRAVRRLVNIVFQDPYSSLNPRMKLSTIISEPMLSTRFCTRAEAEIRARELL
                     HEVGLPEFFEDRYPHELSGGQRQRVAIARAISTNPKLLILDEPTSALDVSVQAQILNL
                     LRGLREKYGMSMLLITHNIAVVAYLAEYVYVMYAGKIMEWGAKAKVLRDPQHPYTKAL
                     MSSVPAIGETKTRSILRGDPPNLIVPPLACRFHPRCPVAFEPCGWSAEEVAEDLEFLL
                     TGKYYGTFGDGVSLATEGERTIIIQGTTDVQRIQELVGLEKEDVRSLKGVQTVDATDG
                     TTVVRLYEPTEPEMYPSPDGREVKCLLFRADGTATAANRSGSAS"
BASE COUNT          593 a          968 c          940 g          571 t
ORIGIN      
        1 gtccccgagc tcggggtgat cgcgaatatc gggttggacc tagccccctt cggctactgg
       61 tggaccgtga tcgtgcccgg agccgtcatc accctgttcg cattggccgt gaacctgatg
      121 ggcgacggcc tccgcgacgt catcgatccg cggagacgga gctagcgtgc cggatgcact
      181 cgccattcgc gatcttcacg tccagttcca cacccgacgg gggatctaca aggccctgaa
      241 tggcgtcgac ctcgcgctcc gacgcggaga ggttctgggc atcgcgggcg aaagcggctg
      301 cgggaaaacc acgctggggc tcgccgtcat ttccctactt ccgcggaacg cagcgattgc
      361 gagtggccag gtagtcttcg acaacaaaga cctcgtgaac ctctcgcggg agtacgctga
      421 acgcgctggc gaccgcttca gaccgagaaa acacgagcgg gtcctccgtc gcgttggcaa
      481 agcgatgact cagattcgcg gacggcgaat ctcgatggtg ttccaggaac ccatgacgag
      541 cttgaacccc gtcctgtcaa ttggcttcca agtggctgag gccgtctacg tccacgaccc
      601 agcgttgctc gcgcggcgtg tcctcgccag ggagaaggcg acctctcagg acattcgcga
      661 cctccttacg cttttgcagc tgacccacgg tgatgaagcg gcggtgaaga agttcgccac
      721 agaccgcggg ctcgtcggca tcgaggaaca agtcctgcac atctggaggc gccaggacat
      781 ccacatttct cgaaaggaga aggcgattcg cgcgttgggt gggcaaccga tgaatctttt
      841 cgaacgatac gtcttcgaaa gagtggtcaa gaccggggcg gttccctggc agttcagccg
      901 gcttcgtctc ttctattggc tcgtgcgcct gagtttggtt ggcttgattc tagtattcct
      961 gggccgccaa gcgcgaagga tcctgatcaa agaagggtac cgcaaggcgc aggaagtcct
     1021 cacgtcgctc ggcatccacc acgccgagcg ggtcgtgaaa atgtacccgc acgagttgtc
     1081 cgggggaatg cgtcagcgcg tcgtcatcgc aatcgcactc gcgaacaacc ccgaaattgt
     1141 tatcatggac gaaccgacca gcgcggtgga cgtgacggtc caggcgcaga ttctcgagct
     1201 cgtcaagcag atccggacct ccgtcagcgc gtccttcatc gtgatttccc atgatcttgc
     1261 cgtactcgct gaggtctcgg accgaatcgc aatcatgtat gcgggacgta tcgtcgaggt
     1321 cgctccgacg gcggagatcc tccagaaacc cctgcatccg tacacgcagc agctgatctc
     1381 cgcaattccg acactggagg ggaagtcggt cgaagggatc aaaggggagg ttccggacat
     1441 gcgggaccct ccgagcggat gcgccttcca tccccgctgt ccgttcgcct tcgagaagtg
     1501 caactccgtc gtgccagtcg actttcagca aggcaccgat cagcttgtcg cgtgctggct
     1561 gtacgagggc aaatagcatg atgatcgcgg cctatgggct cagcaagttc ttccccgtcc
     1621 gtggggcctt ccgaacgacg accgctctca aggcggtcga ggacgtcggt ctgaagatcc
     1681 aaaacgaaca ggtcgtcggc ctcgtcgggg agagcggatc gggcaagagc acgattggtc
     1741 gctgcctcat ccggctgttg aacgcgacgg atggagaggt cctcttcgac atccccgact
     1801 cggacctcgc cgaatacgag aaggcgcggg cggcgggtgc cacggagcga ctcgacgaaa
     1861 tcgccgaccg gttctctctc ctgcggcggt cttcatccga acttcgcgcg gtgcgacggc
     1921 tggtgaacat cgtgttccag gatccgtact cctccctcaa tccgaggatg aaactctcga
     1981 cgatcatcag cgagccgatg ctctcgacgc ggttctgcac tcgagcggaa gctgagatcc
     2041 gcgcgcgaga actcctccac gaggtgggtc ttccggagtt cttcgaggac cggtacccgc
     2101 acgaactctc gggaggccag cggcaacgag ttgcgattgc gcgcgccatc tcgaccaacc
     2161 cgaaactcct catcctcgac gaaccgactt cggcgctcga tgtgtccgtc caggcgcaaa
     2221 tcctcaatct gctccgcggc ctccgagaga agtacggaat gagcatgctc ctgatcacgc
     2281 acaacatcgc cgtcgtcgcg tacctcgccg agtatgtgta cgtcatgtat gcgggcaaga
     2341 tcatggagtg gggagccaag gccaaggtgc tgcgggatcc ccagcatccg tatacgaagg
     2401 cgctgatgtc ctcggtcccg gccatcgggg agacgaagac ccgatcgatc ctccggggag
     2461 atccacccaa tctgatcgtc ccgcccctcg cgtgtcgatt ccacccccgg tgcccggtcg
     2521 cgttcgagcc gtgcggatgg agtgccgagg aagtcgcgga ggacctcgag ttccttctca
     2581 ccgggaagta ctacgggacc ttcggtgacg gcgtcagcct ggcaacggag ggagagcgga
     2641 cgatcatcat ccagggcacg accgacgtcc aacggatcca ggaactcgtc ggtctcgaga
     2701 aggaggatgt ccggagcctg aaaggcgtcc agacggtcga tgcgaccgac ggcacgacgg
     2761 tcgtccggct ctatgagccc acggaaccgg aaatgtatcc gtccccggac ggcagagaag
     2821 tcaagtgctt gctcttccgg gccgacggaa cggccaccgc ggcgaatcgc tcaggctcgg
     2881 cttcgtagcg gccaggcatt ccagcggctc acactcggct cgcggtgacg gcctcccgaa
     2941 tcattcttcc cgcttcggct cgtagacggc gaccgcctca attgcaactt tcaggcccgg
     3001 actcccgatc ccgactttcg ccgtggacct cgcgggcggc tcttccgcaa agaactcctt
     3061 gtacgcctcg tt
//
LOCUS       DATLMA010000295         1203 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_209425, whole genome shotgun sequence.
ACCESSION   DATLMA010000295 DATLMA010000000
VERSION     DATLMA010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209425"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..360
                     /locus_tag="VNA10_03770"
     CDS             13..360
                     /locus_tag="VNA10_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HVG36828.1"
                     /translation="MSRRDETLVDLVIETGLSRNIAKTLVFLSKRDETTSVEIEKATG
                     LRQPEVSIAMQELRRRKWVDKRDIKKEGKGRPVHSYRLSLPWADILAHIDREEQAKID
                     RIEANRKKLKTFV"
     gene            complement(344..1036)
                     /gene="rpiA"
                     /locus_tag="VNA10_03775"
     CDS             complement(344..1036)
                     /gene="rpiA"
                     /locus_tag="VNA10_03775"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HVG36829.1"
                     /translation="MASRDELKRNAAEAALAYVKPGMVLGLGTGSTARHFLAGVGRLV
                     ASGMDLKGVPTSLATAEEAKRLGIPLTSLEESFWLDLTVDGADEVDPKLDLIKGMGGA
                     LFREKIVAAASKKFVVIVDDSKLVRRLGTKTPLPVEVHPFGWKNASAALEGLGAKVEL
                     RKAGSEAFRTDNGNHILDAHFGPIRGPAKLAARISGIPGVVGHGLFLKMAHAVLVASQ
                     MGVRTLEPTRTS"
BASE COUNT          210 a          404 c          397 g          192 t
ORIGIN      
        1 cgggaggtcc gcctgagtcg gagggacgaa accctggtgg acctggtgat cgagaccggc
       61 ttatcgcgga acatcgcgaa gaccctcgta ttcctatcga agcgcgacga gacgacctcg
      121 gtcgagatcg agaaggccac gggcctgcgg caaccggagg tcagcatcgc gatgcaggaa
      181 ctccgtcggc ggaaatgggt cgacaagagg gacatcaaga aggagggcaa aggtcggccc
      241 gtccactcgt atcggctgag cctgccgtgg gccgacatcc tcgcgcatat cgaccgggaa
      301 gagcaggcga agatcgaccg gatcgaagcg aaccgcaaga agctcaagac gttcgtgtag
      361 gctcgagcgt gcggacgccc atctgggacg ccaccaggac ggcgtgggcc attttcagga
      421 acaggccgtg gccgacgacg ccggggatgc ccgagatccg cgcggcgagc ttcgccggtc
      481 cgcggatcgg cccgaagtgc gcgtcgagga tgtggttccc gttgtccgtc cggaaggcct
      541 cgctgccggc cttgcgcagc tcgaccttcg ctccgaggcc ctcgagcgcc gcggacgcgt
      601 tcttccagcc gaacggatgc acctccacgg gcaacggcgt cttcgtgccg aggcggcgca
      661 cgagtttcga gtcgtcgacg atcaccacga acttcttcga cgccgcggcg acgatcttct
      721 cgcggaacaa ggcgccgccc atccccttga tcaggtcgag cttcgggtcg acctcgtccg
      781 cgccgtcgac ggtcaggtcg agccagaagc tctcctccag cgaggtcaac ggaatcccca
      841 gccgcttcgc ttcttctgcg gtggcgagcg acgtgggcac gcctttcagg tccatcccgc
      901 tcgcaacgag gcggccgacg cccgcgagga aatgtcgcgc cgtcgatccg gtgccgaggc
      961 cgaggaccat gcccggcttg acgtacgcga gggcggcctc ggccgcgttc cgcttcagct
     1021 cgtcccgaga ggccatctca ggccctccgg cgcagttcct cgacgagctt cacgagctcc
     1081 ccgatcacga gatcgtcgag cttctcgccc aatgccttcg atgccttgga cggatccccg
     1141 gtgacgctgg accagtactt ccgcgcgtcg gccacgaccg cgtagggagg gatctcgttc
     1201 ttc
//
LOCUS       DATLMA010000296         1598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_449847, whole genome shotgun sequence.
ACCESSION   DATLMA010000296 DATLMA010000000
VERSION     DATLMA010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449847"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VNA10_03780"
     CDS             <1..561
                     /locus_tag="VNA10_03780"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HVG36830.1"
                     /translation="KRTKDPKRDVERLASKWEMGGMKIHPPHQLFAANAYADGTLPAL
                     RTIYKTAERLKMPVMVHTGTSVFPGARSKFGDPMALDDVAQDFPDLTILMAHGGRPLW
                     CDTAFYLLRRHRNVYLDISSIPPKRLLEWFPRLEEIADKVVFGSDWPAPGVPGIREEI
                     EGLRSLPLTGPTKERILSGNAARLVK"
     gene            634..1209
                     /gene="msrA"
                     /locus_tag="VNA10_03785"
     CDS             634..1209
                     /gene="msrA"
                     /locus_tag="VNA10_03785"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014434466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HVG36831.1"
                     /translation="MSDSKRSHEVVTLAGGCFWCLQPVFQELRGVEKVEVGYSGGQLA
                     NPSYEAVCTDTTGHAEAVQVTFDPSVIPLADVLRIFFSVHDPTTLNRQGADFGTQYRS
                     AIFYDSPEQEKTARQVMAEIHNAGIWGRPIVTEVAPLHAFYRAEEYHQDYFRKNPTAG
                     YCRVVIAPKVSKFRKQFAARLKTSAVAPKGT"
     gene            1234..>1598
                     /locus_tag="VNA10_03790"
     CDS             1234..>1598
                     /locus_tag="VNA10_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012680669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HVG36832.1"
                     /translation="MAENRLSRESSTYLKGAAHQPVEWYPWGEDAFRRAKELDRPILL
                     DIGATWCHWCHVIDRESYEDPNLASVINENFVAIKVDRDERPDIDARYQQAVGAIAGQ
                     GGWPLTAFLTPDGKVFYGGT"
BASE COUNT          317 a          517 c          502 g          262 t
ORIGIN      
        1 aaacgcacga aagatccgaa acgggacgtc gaacgactcg cgtcgaagtg ggagatgggc
       61 ggaatgaaga tccatccgcc gcaccagctc ttcgccgcga acgcgtacgc cgacgggacg
      121 ttacctgccc tccggacgat ctacaagacc gcggagcgat tgaagatgcc ggtcatggtc
      181 cacaccggga cctcggtctt ccccggcgcg cgatcgaagt tcggggatcc gatggccctc
      241 gacgatgtcg cccaagactt ccccgatctc acgattctga tggcccacgg ggggagaccg
      301 ctctggtgcg acacggcgtt ctacttgctt cgacgccatc ggaacgtcta cctagacatc
      361 tcgagcatcc cgccgaagcg actgctggaa tggttcccgc gactcgaaga gatcgcggac
      421 aaggtggtct tcgggtcgga ctggccggca cccggagttc cggggattcg cgaggagatc
      481 gaggggctgc gttccctccc gctcacggga ccaacgaagg aacggatcct gagcgggaac
      541 gccgctcgac tggtcaagtg actcacgtca aggcgtcccc atgatggcaa accttaatcc
      601 tgggccgagg cgaatcccaa ggtgaggaga atgatgtctg attcgaagcg aagtcatgag
      661 gtcgtcaccc tcgccggtgg atgtttctgg tgcctccagc ccgtattcca agagctccgc
      721 ggcgtcgaga aagtggaggt cggatattcc ggcggtcagc tcgcgaaccc ttcctacgag
      781 gccgtctgta cggataccac aggccatgcg gaagccgtcc aggtgacgtt cgacccgagc
      841 gtcatcccgc tcgcagatgt ccttcgcatc ttcttctccg tccacgaccc gaccaccttg
      901 aatcggcaag gggccgactt cgggacgcag taccgatccg cgatcttcta cgattcaccg
      961 gagcaggaga agacggcgag gcaagtcatg gcggagattc acaacgcagg aatctgggga
     1021 cgcccgatcg tcacggaagt cgcgccgctg cacgcgttct accgggccga ggaataccat
     1081 caggactact tccggaagaa cccgaccgcg ggctactgcc gcgtcgtcat cgccccgaaa
     1141 gtctcgaagt tccgcaagca gttcgcggcg cggctcaaga cctccgcggt cgcacccaaa
     1201 ggcacttaac gcggcctcgg ctggttcccc tccatggcgg agaaccggct ctcccgggaa
     1261 tcctcgacgt acctgaaggg agcggctcac cagccggtcg agtggtaccc gtggggcgag
     1321 gacgccttcc gccgcgcgaa ggaactcgac cgcccgatcc tcctggacat cggggccacc
     1381 tggtgccact ggtgccatgt gatcgaccgc gaatcgtacg aggacccgaa tctcgcgtcc
     1441 gtcatcaacg agaacttcgt cgcgatcaag gtggaccggg acgagcggcc ggacatcgac
     1501 gcgcgctacc aacaggccgt gggcgcgatc gcgggccagg gcgggtggcc gctcaccgcg
     1561 ttcctcacgc cggacggcaa ggtgttctac gggggcac
//
LOCUS       DATLMA010000297         1822 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_818433, whole genome shotgun sequence.
ACCESSION   DATLMA010000297 DATLMA010000000
VERSION     DATLMA010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818433"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VNA10_03795"
     CDS             <1..246
                     /locus_tag="VNA10_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HVG36833.1"
                     /translation="FGLLVFVPILTVILTAAYYIWAMQRAIFGPPNPKWEAMPDLHRF
                     EVAPLAVLVAAFAVFGIVPVLFLSLISNWAQGILGGL"
     gene            248..>1822
                     /locus_tag="VNA10_03800"
     CDS             248..>1822
                     /locus_tag="VNA10_03800"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HVG36834.1"
                     /translation="MSSYGVFLPEAILVATALASAVLGFAWRKRPDLLWAFSVIGTGL
                     AIFVTLDMMGLGIGRALNLSVWPSPVGKEGDFAVELKMRVDTFALFFQLMFQFVAFLA
                     IVASRGFIHADEPHQGEYYALMLLAVVGMMFTAAATDLFVLFLAFETSSLSTFALVAF
                     RKKDKQATEAAVKFFIIGAVSSGIILFGISLIYGIAGTTSIGTTTTDLLVLRNGLTLA
                     GHPEIEPPLIIALVLLIAGFGFKVAVVPFHMWAPDVYQGSPTTISVLLTSASKNVGIV
                     ALFRVFLIGLLSVQVDWVATLAILAIVTQTVGNVVAIPQRSIKRMLAYSSIAQAGYIL
                     IALAVGAVALQSNPPHTDNAAYVAAFGLVGGMLHVFVYGAMKAGSFLVVAGTESRGIP
                     DDIEAYKGLSRRMPFMAFSMLVFLLSLAGIPPLGGFFSKFVLFSSAVNASVFNPWYLA
                     LAVSGVLNSALSLYYYARVIWYMYILEPEAGTAKEPVARSISAAVFVALSIVMLTAVI
                     AVFFFGYLTYAARSFFG"
BASE COUNT          235 a          614 c          581 g          392 t
ORIGIN      
        1 ttcggcctgc tcgtcttcgt cccgatcttg accgtcatcc tgacggcggc gtactacatc
       61 tgggcgatgc agcgcgcgat cttcggaccc ccgaacccga agtgggaggc gatgccggac
      121 ctacaccggt tcgaggtggc ccccctcgcg gtcctcgtgg cggcgttcgc ggtcttcggg
      181 atcgtcccgg tcctgttcct gtccctgatc tcgaactggg cccaggggat cctcgggggc
      241 ctctgacgtg tcgagctacg gcgtcttttt acctgaggcc atcctcgtcg cgaccgcgct
      301 cgcgtccgcg gtcctcgggt tcgcgtggcg gaagcggccc gacctgctgt gggccttttc
      361 cgtgatcggc acgggtctcg cgatcttcgt gaccctcgac atgatgggcc tgggcatcgg
      421 gcgggcgctg aacctctcgg tctggccgtc ccccgtgggg aaggaagggg acttcgcggt
      481 cgagctgaag atgcgggtcg acacgttcgc actgttcttc cagttgatgt tccagttcgt
      541 cgccttcctg gcgatcgtcg cctcccgcgg tttcatccac gccgacgagc cgcaccaggg
      601 ggagtactac gccctcatgc tcttggcggt cgtcgggatg atgttcaccg cggccgcgac
      661 ggacctgttc gtcctcttcc tcgccttcga gacgtcgagc ctgagtacct ttgccctggt
      721 cgcgttccgg aagaaggaca agcaggcgac cgaggcggcg gtgaagttct tcatcatcgg
      781 tgcggtcagc tccgggatca tcctcttcgg catctccctg atctacggga tcgccggcac
      841 gacctcgatc gggacgacga ccacggacct cctggtcctc cggaacggct tgacgctcgc
      901 gggccatccg gagatcgagc cgccgctgat catcgccctc gtgctgctga tcgcgggctt
      961 cgggttcaag gtcgcggtcg tgccgttcca catgtgggcc ccggacgtgt accagggctc
     1021 cccgacgacg atcagcgtcc tgctgacgtc cgcctcgaag aacgtcggga tcgtcgcgct
     1081 gttccgcgtc ttcctgatcg gcctcctgag cgtccaggtc gactgggtcg cgaccttggc
     1141 gatcctcgcg atcgtgacgc agaccgtcgg gaacgtcgtc gcgatcccgc agcggtcgat
     1201 caaacggatg cttgcttact ccagcatcgc gcaggccggt tacatcctga tcgccctcgc
     1261 ggtcggcgcg gtcgcccttc agtcgaatcc gccgcacacc gacaatgcgg cgtacgtggc
     1321 cgcgttcgga ctcgtgggcg gcatgctcca cgtgttcgtc tatggggcaa tgaaggcggg
     1381 atcgttcctc gtcgtcgccg gcacggagtc gcgagggatc ccggacgaca tcgaggcgta
     1441 caagggcctc agccgccgga tgccgttcat ggccttttcg atgctcgtct tcctcctgag
     1501 cctcgccggc atccccccgc tcggcgggtt cttctcgaag ttcgtcctgt tctcgagtgc
     1561 cgtgaacgcg tccgtgttca acccgtggta cctggcgctc gcggtgtccg gcgtcctgaa
     1621 cagcgccctg tccctgtact attacgcgcg ggtgatctgg tacatgtaca tcctcgagcc
     1681 ggaggcgggt accgccaagg agcccgtcgc tcggtcgatc agcgcggcgg tgttcgtcgc
     1741 cctgtcgatt gtcatgttga ccgccgtcat cgcggtgttc ttcttcggct acctgacgta
     1801 cgcggcgcgc tcgttcttcg ga
//
LOCUS       DATLMA010000298         1422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_329588, whole genome shotgun sequence.
ACCESSION   DATLMA010000298 DATLMA010000000
VERSION     DATLMA010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329588"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VNA10_03805"
     CDS             <1..601
                     /locus_tag="VNA10_03805"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG36835.1"
                     /translation="EPDDPEAPRLVELVRRQAQRMRELIDDLTDLSLIESGEVALSPE
                     KVELGALAGETAEELRATARSRDVSIRIESADGVTVEGDRRRLGQILRNLLDNAVKFS
                     PAGGDVRIRIDRVDGRPSLVVEDDGPGIPLGEQDRIFQRFYQVDRSRSKVRPGTGLGL
                     AIVKHLAQLHGAEVTVASQPGQGSAFRVTFRRDAGETGG"
     gene            611..1279
                     /gene="phoU"
                     /locus_tag="VNA10_03810"
     CDS             611..1279
                     /gene="phoU"
                     /locus_tag="VNA10_03810"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HVG36836.1"
                     /translation="MKEHFAERLEGLRRRLILMGSEVEKQIRASIEALTEGSAEKAHA
                     VIARDEDIDRLENQIEEEAIQLLALEQPVAIDLRFLLAVLKINNDLERIGDHAVNIAE
                     GAERLIGRPPFQPAIGIRAMSELVQAMLRQSLDAFIARDAALAKQVIQQDDILDAKNE
                     GMIRQLLTYMAETPALISHCLELISVSKNLERVGDLATNIAEDTIFIAEAKLVKHHGV
                     ELAG"
BASE COUNT          264 a          452 c          500 g          206 t
ORIGIN      
        1 ggagcccgac gacccggagg cgccgcgcct ggtcgagctc gtccggcggc aggcgcagag
       61 gatgcgcgag ctgatcgacg acctgaccga tctctcgctg atcgagagcg gcgaggtcgc
      121 cctctctccc gagaaggtcg agcttggcgc gcttgccggc gagaccgcgg aggagctgcg
      181 cgcgaccgcc cggagccggg acgtctcgat ccggatcgag agcgccgacg gcgtcaccgt
      241 cgaaggggac cgccgacggc tcggacagat tctgcgcaac ctcctggaca acgccgtgaa
      301 gttttccccg gccggcggcg acgtacgaat ccggatcgat cgagtggacg ggaggccatc
      361 gctcgtcgtc gaggacgacg ggccgggaat tccgctcggg gaacaggacc ggatctttca
      421 gcggttctac caggtggacc gatcgcgctc caaggtccgg ccgggaacgg gtctcggcct
      481 cgcgatcgtc aagcacctgg cgcagctgca cggcgcggag gtcacggtcg cgagccagcc
      541 ggggcaaggg agcgcttttc gcgtgacgtt tcgacgggac gccggggaaa cgggaggctg
      601 aggaggaacg atgaaagaac actttgcgga gcggctggaa ggtctccggc gccgcctcat
      661 cctgatgggc tcggaggtgg aaaagcagat ccgcgcctcg atcgaagcgc tcaccgaagg
      721 gtccgcggag aaggcgcacg cggtgatcgc ccgtgacgag gacatcgatc ggctggagaa
      781 ccagatcgag gaggaggcga ttcagctcct cgccctggag cagccggtcg cgatcgacct
      841 gcggttcctg ctggccgtgc tcaagatcaa caacgacctc gagaggatcg gggaccacgc
      901 ggtcaacatc gcggaaggcg ccgaaagact catcggacga ccccccttcc agccggcgat
      961 cgggattcgc gcgatgtccg agttggtgca ggcgatgctc cggcagtctc tcgacgcctt
     1021 catcgcgagg gatgccgcgc tggcgaagca ggtcatccag caggacgaca tcctcgatgc
     1081 gaagaacgag gggatgatcc ggcagctcct gacctacatg gcggagacgc cggcgctcat
     1141 ctcccactgc ctcgagctca tttcggtctc caagaacctc gagcgcgtcg gggatctggc
     1201 gacgaacatc gccgaggaca cgatcttcat cgccgaagcg aagctggtga agcatcacgg
     1261 ggtcgagctc gccggctgac gccgaagagc tctcgagcgg ctccccccgg ttctggaggg
     1321 gggagaatcg ctccgtgccg gatccacgac ctctctggac gccgcccgcc gacgtgcgcg
     1381 agaaggcacg catcggcgcg tacctcgatt ttctgagacg ca
//
LOCUS       DATLMA010000299         1330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_209691, whole genome shotgun sequence.
ACCESSION   DATLMA010000299 DATLMA010000000
VERSION     DATLMA010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209691"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..805)
                     /gene="phoU"
                     /locus_tag="VNA10_03815"
     CDS             complement(101..805)
                     /gene="phoU"
                     /locus_tag="VNA10_03815"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HVG36837.1"
                     /translation="MPQAAERKAFQKGLQKLNENMVTLAELSELAIRKAIDSLTRLDS
                     EVAREVFTIDQEVYGLQLEIEHNCVDLIALYAPVARDLRTVTTSLKITTDLDRIGRYA
                     KDLGELTLQFSPSTHGAEPELARIREMADRTIQMVDTAIDAFVKHDAESVRNIMQVDD
                     VVDRMHDENFNELVRRMTEGSLKIETGARYILVNRYLERIADHAVNIGMRVVYMVTGD
                     WLPRERAADRAKRIPK"
     gene            complement(805..>1330)
                     /locus_tag="VNA10_03820"
     CDS             complement(805..>1330)
                     /locus_tag="VNA10_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011523774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HVG36838.1"
                     /translation="PAVSVRRRIGMVFQKPNPFPTMSIYDNVAAGLRLNGERDRDKLD
                     AAVLASLKQAALWDEVKDSLDKSGASLSGGQQQRLCIARALAVKPEVVLMDEPCSALD
                     PIATAKIEDLIFDLKKDYTVVIVTHNMQQAARVAETTAFMYLGHVIEVGATRELFERP
                     KETLTESYITGRFG"
BASE COUNT          221 a          412 c          400 g          297 t
ORIGIN      
        1 gtttctctca tcggatcgtg aaggcgcaag gctgaggatg aacctgaccg aaggggtctc
       61 gggtcgtatc cgaggtctat agaggcatcg cctggacgac tcacttcggg attcgcttcg
      121 ctcggtcagc ggctcgctcc cgcggaagcc aatctcccgt gaccatgtag acgacgcgca
      181 tgccgatgtt caccgcatgg tccgcgatcc gttcgaggta ccggtttacc aggatgtatc
      241 gcgcgccggt ctcaatcttc agggatcctt ccgtcatccg tcgcacgagt tcattgaagt
      301 tttcgtcgtg catccggtcc acgacgtcgt cgacctgcat gatgttccga accgattccg
      361 cgtcatgctt cacgaacgca tcgatcgccg tgtcgaccat ctgaatcgtc cggtccgcca
      421 tctctcgaat ccgcgcgagc tccggttccg caccgtgggt cgagggactg aattgcaggg
      481 tgagctcccc caagtccttc gcatatcgtc cgatccggtc caggtccgtc gtgatcttca
      541 gagatgtcgt gacggtccgg agatcccgcg cgacgggtgc atagagggcg atgaggtcga
      601 cgcaattatg ctcgatctcg agctggagcc cgtagacctc ctggtcgatc gtgaagactt
      661 ctcgggcgac ttcgctgtcc agacgggtca gggagtcgat ggctttgcgg atcgcgagtt
      721 cgctgagctc cgcgagcgtc accatgttct cgttcagctt ctgaagccct ttctggaacg
      781 cctttcgttc tgcggcttgc ggcactatcc gaacctcccg gtgatgtaac tttccgtcaa
      841 cgtctctttg ggtcgctcga agagctcgcg cgtcgcgccg acctcgatga catgacccag
      901 gtacatgaag gccgtcgtct ccgcgacgcg agcggcctgc tgcatgttgt gcgtcacgat
      961 gaccacggta tagtcctttt tcaggtcaaa gatgaggtcc tcgatcttcg cggttgcgat
     1021 cgggtcgagg gcggagcacg gctcgtccat gaggacgacc tccggcttga ccgcgagggc
     1081 gcgcgcaatg cagaggcgtt gctgctggcc acccgagaga ctcgcgccgc tcttgtcgag
     1141 cgagtccttc acctcatccc aaagggcggc ctgtttgagg ctcgccagga ccgcggcgtc
     1201 aagcttatcc cggtctcttt ctccgttcag tcgcagaccg gccgccacat tgtcgtagat
     1261 ggacatcgtc ggaaaggggt tcggcttctg gaacaccatt ccgatccgcc ggcgcacgct
     1321 gaccgcgggg
//
LOCUS       DATLMA010000300         1327 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_393693, whole genome shotgun sequence.
ACCESSION   DATLMA010000300 DATLMA010000000
VERSION     DATLMA010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393693"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..530)
                     /locus_tag="VNA10_03825"
     CDS             complement(207..530)
                     /locus_tag="VNA10_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36839.1"
                     /translation="MAAPLSTQARVGRRIVLTVLWTMLLIVGVTIGLLVLVPGIQDSI
                     QRASGAVAGGAFALSVAVALILLGLWGISANNRNLKHAVDLIAQVDRARKETIQLEST
                     RYMQK"
     gene            626..>1327
                     /locus_tag="VNA10_03830"
     CDS             626..>1327
                     /locus_tag="VNA10_03830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36840.1"
                     /translation="MAEGWKRLWSFVGRLPWYRFAAGVLAGGAGLLVTFIMRAFGLGV
                     FLPEIAVDFVVGRIPGGIESFFIRTLGEGAKLLALLTALAVFLVLPGIYATLFRRVQR
                     WLKNRWLVIAFYTFSSAGIVLVVILPLLDAGFLGSNTSAGAGFAVFSQLIGYWLYAAI
                     LDHVMVDVAAEYPEGFSLSRRQFIAGTIGAIAIAALTVYGLGSLISKKGRLVFASVAE
                     MLSKEQTPTSEFYVVT"
BASE COUNT          214 a          426 c          420 g          267 t
ORIGIN      
        1 aagacgatcc cgaggatgct catgctcagg ttccatcggt acagccattc cgcggcccgg
       61 atcttttgac gttcggcgct catgcgggtc ccttccacgc cgacatcgca tcggaaggga
      121 tattccccac ggttggtggc gcgaatcgga gcgggcggat gcgcgtcgat ggggacgttc
      181 gacgacggag agcgagagga acaagctcac ttctgcatgt accgggtgct ctcgagttga
      241 atcgtctcct tgcgggcccg gtccacctgc gcgatcaagt cgaccgcgtg cttgaggttg
      301 cggttgttcg cggagatccc ccagagtccg agcaggatga gggccaccgc gaccgagagc
      361 gcaaacgccc cgcccgccac ggcgccggag gcccgttgga tcgagtcctg aattccggga
      421 acgagcacga ggagcccgat cgtcacgccg acgatcagga gcatcgtcca caaaaccgtg
      481 aggacgatcc gccgtccgac tcgggcttgc gtgctcagcg gagcagccat gtaatccgcc
      541 gacgcgcctc ggcctaaata aaggattggt cgttgattgc ggcttggggc ataggttcaa
      601 gcgagcgccc cgacgtaggc cgcgcgtggc cgagggatgg aagcgtctct ggtcattcgt
      661 tgggcggctc ccttggtacc ggttcgccgc cggcgtgctt gcgggtggcg cgggcctgct
      721 cgtcacgttc atcatgcgcg ccttcggcct cggcgtcttc ctcccggaga tcgccgtcga
      781 tttcgtcgtc ggccgaatcc ctggcgggat cgaatcgttc ttcatccgaa ccctcgggga
      841 aggcgcgaag ctcctcgcgc tgcttaccgc cctcgccgtc ttcctcgtcc tcccgggaat
      901 ctatgcgacc ctgttccgac gggtgcaacg gtggctgaag aaccgttggc tcgtcatcgc
      961 cttttacacg ttcagctccg ccggaatcgt gctggtcgtc atcctccccc tcctcgacgc
     1021 aggattcctt gggtcgaaca cgtcggcggg ggctggcttt gcggtgttca gccagctcat
     1081 cggatactgg ctctacgcgg ccatcctgga ccacgtcatg gtcgacgtcg ccgctgaata
     1141 tccggaggga ttcagcctga gtcgccggca gtttatcgcc gggaccatcg gagcgatcgc
     1201 catcgccgca ctgaccgttt acggcctggg cagtctcatc tcgaagaagg gccggcttgt
     1261 ctttgcctcg gtcgcggaga tgctttcgaa agaacaaacc ccgacgtccg agttctacgt
     1321 cgtcacg
//
LOCUS       DATLMA010000301         1707 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_210009, whole genome shotgun sequence.
ACCESSION   DATLMA010000301 DATLMA010000000
VERSION     DATLMA010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210009"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VNA10_03835"
     CDS             <1..483
                     /locus_tag="VNA10_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007912680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HVG36841.1"
                     /translation="LLGGGEMIREVHLGWAKWNDVPYKFEGGTPNIAGAIGLGVAVDY
                     LTTIGMDAVRSHEMEMTEYALEKLARLKGVQTYGPRDVTKRAGVVSFTIDGAHPHDIA
                     SILDVEGICVRSGHHCAQPLMERFNLPATARASFYVYNDLDDVDALVAGIKKVQEVFA
                     "
     gene            483..875
                     /locus_tag="VNA10_03840"
     CDS             483..875
                     /locus_tag="VNA10_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007912676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HVG36842.1"
                     /translation="MSISYDMYQEQILDHYKHPRNKGPLASATKNARDSNPLCGDEVV
                     LHLKVDGSDRIAEVKFEGQGCAISQASASMLTTIVKGIPLTEAEGLGRDTVLKKLGIP
                     LSAVRLKCALLSLHVLKLALGQKADVGT"
     gene            889..>1707
                     /locus_tag="VNA10_03845"
     CDS             889..>1707
                     /locus_tag="VNA10_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016481929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HVG36843.1"
                     /translation="MGSAAKSPKAPHVADLIGHTPLLRLDRLVAHVAPRVQVCAKAEF
                     RNPGGSVKDRAALGMLRAAERSGLTKDRILLDATSGNTGIALAMLGASEGYRVTLCVP
                     ANLSTERRRILQAYGAELVFTPAPEGTDGAQRAAKALAASEPHKYRYLDQYNNDANWR
                     AHFESTGPEIWEQTAGTLTHFVACLGTTGTFVGVGRYLKKMNRNVRLVAVQPDSPFHG
                     IEGVKHLETALVPGIWDPRLADELMFVATEDAQAATRRIARTEGILVGTSSGAAF"
BASE COUNT          317 a          545 c          567 g          278 t
ORIGIN      
        1 ttgctcggcg gcggggagat gatccgggag gtccacctcg gatgggcgaa gtggaacgac
       61 gtcccgtaca agttcgaagg cggcacgccg aacatcgccg gtgcgatcgg acttggggtg
      121 gccgttgatt acctcacgac gatcggcatg gacgcggtcc gcagccatga gatggagatg
      181 acggaatacg cgctcgagaa actcgcccgc ctgaagggcg tgcagacgta cggtccgagg
      241 gacgtcacga agcgagccgg cgtcgtctcg ttcacgatcg acggcgctca cccgcacgat
      301 attgcctcga tcctcgatgt cgaggggatc tgcgtccgtt ccgggcatca ctgcgcccag
      361 cccctgatgg agcggttcaa tctccccgcg accgcgaggg cctccttcta cgtctacaac
      421 gatctcgacg acgtcgacgc gctcgtcgcc ggcatcaaga aggtccagga ggtcttcgcc
      481 tgatgtcgat ctcgtacgac atgtaccagg agcagatcct ggaccattac aagcacccga
      541 ggaacaaggg cccgctcgcg agcgcgacga agaacgcgcg ggactcgaac ccgttgtgcg
      601 gggacgaggt cgtcctccat ctgaaggtcg atggctccga ccgaatcgcc gaggtgaagt
      661 tcgagggcca gggatgtgcg atcagtcagg cgagcgcatc gatgctcacg accatcgtca
      721 aggggatacc gctgacggag gccgaaggct tgggccgcga cacggtcctg aagaaactcg
      781 ggatcccctt gagcgccgtc cgcttgaaat gcgccctctt gtctctccac gtgctcaagc
      841 tcgccctcgg ccagaaggcg gacgtcggga cctgaggccc tcgatctcat gggttcggcc
      901 gcgaagtcgc cgaaggcccc gcacgttgcg gacctcattg gccatactcc gctccttcga
      961 ctcgatcgat tggtggccca cgtggctccc cgcgtgcagg tgtgcgcaaa ggccgaattc
     1021 cggaatcctg gcggcagcgt caaggaccgc gccgcactcg gaatgttgcg agcggccgag
     1081 cggtcgggac tgacgaagga tcgaatcctc ctggacgcga cgtccgggaa caccgggatc
     1141 gctctcgcga tgctcggtgc ctcggaggga taccgggtca ccctctgcgt gccggcgaac
     1201 ctcagcacgg agcgaaggcg catcctccag gcgtatgggg ccgaactggt cttcaccccc
     1261 gctccggagg ggaccgatgg cgcgcagcgg gccgccaaag cgctcgcggc ctcggagccg
     1321 cacaagtacc ggtatctcga tcaatacaac aacgacgcga actggcgggc ccacttcgag
     1381 tcgaccggac cggagatctg ggagcagacc gcgggcacgc tcacgcactt cgtcgcctgc
     1441 ctcggaacca ccggcacgtt cgtcggggtg ggacgctact tgaagaagat gaatcggaac
     1501 gtgcggctcg tggccgtcca gccggacagt ccctttcacg gcattgaggg cgtcaagcat
     1561 ctcgagacag ccctcgtccc ggggatctgg gatccgcgcc tcgcggacga gttgatgttc
     1621 gtcgccaccg aagatgctca agctgcgacg cgtcggatcg cgcggacgga ggggatcctt
     1681 gtcgggacgt cgagcggagc cgcgttc
//
LOCUS       DATLMA010000302         1513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_29167, whole genome shotgun sequence.
ACCESSION   DATLMA010000302 DATLMA010000000
VERSION     DATLMA010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29167"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VNA10_03850"
     CDS             <1..705
                     /locus_tag="VNA10_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36844.1"
                     /translation="GTNLRNWSFTDLQPGQQETVLVTLRIRGGTAGGSFLSNVFEANY
                     TNSGGAVIGYVRSDAATTLVVTDPVPTLIGVAAVAATLVTILLVLRRSHVEIEEVFLV
                     YRDGVLIYHLSRSLSQDKDEDVLSGMLTAIQEFVRDAFVYGEHRELHQLDFGEYRIMI
                     ERGQRVYLAVVYSGKGAVVRRRVRSVLDHIETAYRGVLEDWDGDMERVAGARDLIREY
                     LLKPAGKTFPGLFSFF"
     gene            complement(720..823)
                     /locus_tag="VNA10_03855"
     tRNA            complement(join(720..733,764..823))
                     /locus_tag="VNA10_03855"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(787..789),aa:Ile,seq:cat)
     gene            902..1084
                     /locus_tag="VNA10_03860"
     CDS             902..1084
                     /locus_tag="VNA10_03860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36845.1"
                     /translation="MNGPAADLRALERLVPRENGLTVFDADTQETSYGICFFDGLLFI
                     FDTTARETGASPRSND"
BASE COUNT          298 a          484 c          454 g          277 t
ORIGIN      
        1 ggcacgaacc tccgcaactg gtccttcacg gacctgcaac ccggccaaca ggaaacggtc
       61 ctcgtgacgc tacgaatccg cggcggcacc gcaggcggct cattcctctc gaacgtgttc
      121 gaagcgaact acacgaacag cggcggggcg gtcatcggat atgtacggtc cgatgccgcg
      181 acgaccctcg tcgtgaccga tccggtgccg accctcatcg gcgtcgcggc ggtcgccgcg
      241 actttggtga cgatcctgtt ggtcctccgg cgatctcacg tcgaaatcga ggaagtgttc
      301 ctcgtctatc gcgatggggt gctcatctac cacctctccc gcagcctctc gcaggacaag
      361 gacgaggacg tcctcagtgg catgctgacc gcgatccaag agttcgtccg agacgcgttc
      421 gtgtacggcg agcatcgcga actgcaccaa ctggacttcg gcgaataccg gatcatgatc
      481 gagcggggcc agcgcgttta cctcgcggtc gtctattccg ggaaaggcgc ggtcgttcga
      541 agacgggtgc gctccgtcct cgatcacatc gagacggcgt accgcggcgt gctcgaggac
      601 tgggacggcg acatggaaag agtcgcaggc gcccgagatc tcatccggga gtacctgctg
      661 aagccggccg ggaaaacgtt cccgggactg ttttccttct tctgagtatc ggtcgtcgat
      721 gggcccggcc ggactttccg gtcccgtggg taccgcggga ccttttgaac cgacgaccat
      781 ctggttatga gccagacgct ccaccggact aagctacggg ccccgagccg cggaaccgct
      841 gggcgttact taaggagtgt gtccgccgcg attcccaata cggctccggc tctcaggcat
      901 cgtgaatggg ccggcggcag acctgagagc gctcgagcga ctcgttccca gggaaaacgg
      961 cctcacggtc ttcgacgcgg acacgcagga gacctcgtac gggatctgct tcttcgacgg
     1021 cttgctcttc atctttgaca ccaccgcaag ggaaaccggt gcgtcgccac gatcaaacga
     1081 ctgaccgaac tcacagaccc ccttcgcgtc gctcgcgagt ccgttgatcg cttctggcaa
     1141 gacgcacgag cggtcgggct cttaccgatt ccgtacacgg agtacttctt caaaggtaac
     1201 cttcatgtct acgcgttctc gggatcagtt cgaggattcg acctcgcggc gatcgggaag
     1261 accgcgggcc aatccgaacg tgcgctcttt caaccgcgtg gacggactga agtctcgggt
     1321 tcctaatcca atcgctcggc gcaacgggaa ctccttgaag ggaagcggca cgcacgccac
     1381 gcctcggacc ttcgagtcct taaggcacgg ctgaaagaac tcgggacgca agcgttcgcg
     1441 aatcaaagga agcgacgcac tttatgagca caagcgcccc tcccgaccac gtggccaagg
     1501 aactgaccga aca
//
LOCUS       DATLMA010000303         1402 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_692676, whole genome shotgun sequence.
ACCESSION   DATLMA010000303 DATLMA010000000
VERSION     DATLMA010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692676"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1319
                     /gene="rpoN"
                     /locus_tag="VNA10_03865"
     CDS             <1..1319
                     /gene="rpoN"
                     /locus_tag="VNA10_03865"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HVG36846.1"
                     /translation="AASETPTEAEVEADASAAKEADAEAPPASPDVAETPVEKERDSF
                     DEIDFDSYFEDYLDSAYNPRQYEDTEQVPLENTLSRPQGLPEHLNWQLSMSDAPASVR
                     EIARYLVGNIDEDGYLRVTRDEIRAAGFTDEKEVEAALALVRSFDPPGVGAFDLPDCL
                     MLQIRSLGIDNSLIEKVICEHWSEFLNRQFAQLARSLGVGLSQLQAVFEIVKNLEPKP
                     GRKYSDERTIYVEPDVGVRKIGDEYEIQLNEDGLPKLRISAAYRRMLRGGNGAIGEEA
                     ATYLKDKMRSAVWLIKSLDQRQRTIYKVADSIVRHQREFLENGIEHLRPLVLRDVAND
                     IGMHESTVSRVVSNKYIHTPRGLFPMKYFFHSGIDSTQGSEVSSLSIKSKIAKIVSDE
                     DAARPHSDARIMQKLRAEGIQIARRTVAKYREELRIPSSSQRKQSF"
BASE COUNT          281 a          452 c          439 g          230 t
ORIGIN      
        1 cggccgcttc cgagacgccg accgaggcag aggtcgaggc ggacgcctcg gccgcaaagg
       61 aagcggacgc ggaagctcct cccgcttcgc ctgacgtcgc cgaaacgccg gtcgagaagg
      121 aacgggactc tttcgacgag atcgacttcg attcctactt cgaggattac ctggacagcg
      181 cctacaaccc gcgacagtac gaggacaccg agcaggtccc cctcgaaaac acgctctcgc
      241 gacctcaggg gctgcccgag cacctgaact ggcagctctc gatgtccgac gccccggcct
      301 ccgtccgcga gatcgcgcgg tacctggtcg gcaacatcga cgaggacgga taccttcggg
      361 taacccgtga cgagatccgc gcagccgggt tcacggacga gaaggaagtc gaggcggcgc
      421 tcgccctcgt ccgctccttc gatccaccgg gtgtcggagc attcgacctg ccggactgtc
      481 tcatgctcca gatccgctcg ctcggaatcg acaactctct gatcgagaaa gtcatctgcg
      541 agcattggtc ggagttcctg aaccggcagt tcgcccagct cgcccggtcg ctcggcgtcg
      601 ggttgtcgca gctgcaggcg gtcttcgaga tcgtcaagaa cctcgagccg aagccgggcc
      661 gcaagtactc cgacgagcgc acgatctacg tcgagccgga cgtcggagtc cggaagatcg
      721 gcgatgagta cgagatccag ctgaacgaag acggactgcc gaagcttcgc atctccgctg
      781 cctaccgtcg gatgctccgg ggcggcaacg gcgcgatcgg cgaggaagcg gcgacgtact
      841 tgaaagacaa gatgcgctcg gcggtgtggc tcatcaagag cctggaccag cggcagcgga
      901 cgatctacaa ggtcgccgac tcgatcgtgc gccaccagcg cgagttcctg gagaacggca
      961 tcgagcacct ccggccgctc gtccttcgcg acgtcgcgaa cgacatcggg atgcacgagt
     1021 cgacggtgtc gcgcgtggtc tcgaacaagt acatccacac cccgcgcgga ctctttccga
     1081 tgaagtactt cttccacagc gggatcgact cgacgcaggg cagcgaggtc tcgtccctct
     1141 cgatcaagag caagatcgcg aagatcgtct cggacgagga tgcggcccgg ccccactcgg
     1201 acgcgcggat catgcagaag ctccgcgcgg aggggattca gatcgcccgg cggaccgtcg
     1261 cgaaatatcg agaagagctg cgcattcctt cttcgtcgca gcgcaagcag agtttctgat
     1321 ccgtccggaa tccggattct atggaggcct gatggccatc gaatgcaccg gtcgcaacgt
     1381 ggaaatcact tcgtcgttga tg
//
LOCUS       DATLMA010000304         1855 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_692791, whole genome shotgun sequence.
ACCESSION   DATLMA010000304 DATLMA010000000
VERSION     DATLMA010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692791"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VNA10_03870"
     CDS             complement(<1..659)
                     /locus_tag="VNA10_03870"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HVG36847.1"
                     /translation="MRFDVVIHGGHLLDGTGSASRLADVGIRGGKIVKVGRVGRAESA
                     NSIDASGKYVAPGFIDIHTHSDIGILVEPTAECAVRQGVTTHVIGNCGDSPAPISERY
                     RDLAVRRFEYYGQAQDWTWSTYGEYLDFMATQGVGINIAGLVGHGSVRLATMGFEERP
                     PTADERLKMKAFVDEAMRAGAFGMSTGLVYPPGCFAGTEEIVELAQVVARHHGFYASH
                     IR"
     gene            873..>1855
                     /locus_tag="VNA10_03875"
     CDS             873..>1855
                     /locus_tag="VNA10_03875"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36848.1"
                     /translation="MESWEEELQAFRRRTKKSAQAWEAAKKRIPFGVNSNYRLVDPYP
                     LYVRKAKGSRIWDADGNEYIDFCMAFGALVAGHSHPVLAKAMRERVSNGTIFGFESVD
                     AGPLAEHISRRFRLDRLKFSMTGLDATLFAVRLARAVTGRRRILKFEGCYHGSHDALM
                     VSIKPKKEVEGDRRRPNPVPSSKGLLPELVQTAVVAPFNDLAAVEALGTEHADDIAGI
                     ILEPVPMNMGYVHPKPGFLEGLRRIATEIGALLIFDEVKTCGKWYGGAEEAFGVTPDV
                     KVLGKSIAGGFPLAAVGGTTSIMDQIVPGQIGHAGTFNANPVSISAGLVTMT"
BASE COUNT          349 a          602 c          568 g          336 t
ORIGIN      
        1 cggatgtgcg aggcgtagaa gccgtgatgg cgagcgacga cctgagcgag ctcgacaatc
       61 tcctccgtcc ccgcgaagca tccgggcgga tagaccaggc cggtgctcat gccgaatgcg
      121 cccgcgcgca tcgcctcgtc aacgaacgcc ttcatcttga gtcgttcgtc cgcggtaggc
      181 ggccgttcct cgaagcccat cgtcgcgagc cgcacgctcc catggccgac gaggcctgcg
      241 atgttgatgc caacgccctg ggtggccatg aagtcgagat attcgccgta cgtcgaccag
      301 gtccaatcct gcgcctgccc gtagtactcg aaacgacgga ccgccaggtc tcgatatcgc
      361 tcgctgatcg gcgcaggcga atcaccacag ttcccgatca catgcgtcgt gacaccttga
      421 cggaccgcgc actccgccgt gggctccaca aggatgccga tgtcactgtg cgtgtggata
      481 tcgatgaacc ctggggccac gtacttcccc gatgcgtcga tggaattcgc ggactccgca
      541 cgaccgacgc gccccacctt cacgatcttc cctccgcgga ttcccacatc cgccaggcgg
      601 cttgcagagc ctgtgccgtc gaggaggtgt ccaccatgga tgacaacgtc gaaacgcatt
      661 gcctagagaa cgcccgcggc ctctttaacg gcgcccgcta gaccatgcga atgccgtgca
      721 cacgctgaaa caaccttgtt taaggttaac aattcgcggc gcggtagatt cggtcccatg
      781 gctccggctt tctctcgagg atgcatcgat tgcgtccgtg ttccgaaacc gtttatacta
      841 tgcgagcgtt cgagcgccga cttatcgata tcatggaatc ctgggaggaa gaactccaag
      901 cgtttcgccg gcggacgaag aaatccgcgc aggcgtggga ggccgcgaag aagcggatcc
      961 cctttggcgt caacagcaac taccgcctcg tcgatcccta cccgctctac gttcgcaagg
     1021 cgaagggttc ccggatctgg gacgccgacg ggaacgagta catcgacttc tgcatggcgt
     1081 tcggcgcgct cgtggcgggc cacagccacc cggtcctcgc gaaagcgatg cgcgagcggg
     1141 tgtccaacgg cacgatcttc ggtttcgaat ccgtcgacgc cggtccgctc gccgaacaca
     1201 tcagccgccg gttccggttg gaccgtctca agttctcgat gaccggtctc gacgcgacgt
     1261 tgttcgcggt gcggctcgca cgcgcggtca ccggccgccg ccggatcctg aagttcgagg
     1321 gctgctacca cggatcccac gacgccctca tggtgtcgat taagcccaag aaagaagtcg
     1381 aaggagatcg gaggcgaccg aatccagtgc cgtcgtcgaa gggtctcctc ccggaactcg
     1441 tgcagactgc ggtcgtcgca ccgttcaacg acctcgcggc ggtggaggcc ctcggcaccg
     1501 aacacgcgga cgacatcgcg gggatcatcc tcgaaccggt gccgatgaac atggggtatg
     1561 tccatccgaa acccggattc ctggagggcc tccgcagaat cgcgacggag atcggcgctc
     1621 tcttgatttt cgacgaggtc aagacctgtg gcaagtggta cggcggtgcg gaggaggcgt
     1681 tcggcgtcac cccggacgtc aaggtgctcg gcaaatctat tgcgggcggc ttcccgctcg
     1741 cggccgtggg aggcactacc tcgatcatgg accagatcgt gcctgggcag atcggtcacg
     1801 cggggacctt caacgcgaat cccgtaagca tctcggccgg cctcgtgacg atgac
//
LOCUS       DATLMA010000305         1345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_632246, whole genome shotgun sequence.
ACCESSION   DATLMA010000305 DATLMA010000000
VERSION     DATLMA010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632246"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..1092
                     /locus_tag="VNA10_03880"
     CDS             166..1092
                     /locus_tag="VNA10_03880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HVG36849.1"
                     /translation="MAADIVFIVNPASANGRMRRRWKTYERGFRRELGSRFAVRTTDH
                     PGHATHHTRAALGEGATTIVSVGGDGTFNEVVNGYLGHRETDRHTDACLAVFSVGTGA
                     DFGRTLPMPATPAALARCIRERQPQTIDAGLCEFLDTGARKKRYFVNVAEFGSGGAVV
                     DRVNRSSKILGGRLSFIIAILRTLPRYRNTRVVYEADGGPSKEAVVNDFVVANGRYFG
                     AGLMPAPSADLADGLLDVVIFGDIDFKTARRNLPALRRGEHLSLKEVSTFRCREVTIH
                     AAEEMIDLDGECIGRHPLRFSVVPNAVSILAE"
     gene            complement(1097..1221)
                     /locus_tag="VNA10_03885"
     tRNA            complement(join(1097..1131,1156..1172,1199..1221))
                     /locus_tag="VNA10_03885"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1157..1159),aa:Gln,seq:ctg)
BASE COUNT          229 a          420 c          446 g          250 t
ORIGIN      
        1 gccggctggg cttgttctac gagacgccgg accaaggcgt ccatgtggcg ggagcagtgg
       61 cggagcgggt cgggggaatt ctcggatggg attccgcgag gacggagctg gaggtccgcg
      121 cttacgaaga ccttgtccac gcccatcaag gatttcgggt cgaccatggc ggctgacatc
      181 gtcttcatcg tcaatccggc ctcggcgaac ggtcggatgc gccgtcggtg gaagacctac
      241 gagcgggggt tccgccgtga gctcggttcc cggttcgcgg tccgaacaac ggaccatccc
      301 ggccatgcca cgcaccacac acgcgcagcc ctcggtgaag gcgcgacgac aatcgtctcg
      361 gtcggcggcg acgggacctt caatgaggtc gtcaacggtt acctggggca tcgggagacc
      421 gaccggcaca cggatgcgtg tctcgcggtg ttctcggtcg ggacgggcgc cgatttcggg
      481 aggacgctcc cgatgcccgc cacaccggcg gccctcgccc ggtgtatccg ggagcggcaa
      541 ccgcagacga tcgatgcggg cctctgtgag ttcctcgaca ccggcgctcg aaagaaacgc
      601 tacttcgtca acgtcgccga gttcggttcg ggtggagcgg tggtcgatcg tgtgaaccgc
      661 tcctccaaga tcctcggcgg ccggctctcc ttcatcatcg caattctccg aacgcttccg
      721 cgataccgga atacgcgcgt ggtctacgaa gcggacgggg ggccatccaa ggaagctgtc
      781 gtcaacgact ttgtcgtcgc aaacggccgg tatttcggag cggggctgat gccggcgccc
      841 tctgcggacc tggcggacgg attgttggat gtggtcatct tcggggacat cgatttcaaa
      901 acggctcgta ggaatctgcc cgccctgcgg cggggcgagc acctctcgtt gaaggaagtc
      961 tcgacgttcc ggtgtcgcga ggtgacgatc cacgccgcag aagagatgat cgacctcgat
     1021 ggcgaatgca tcggccgcca tccgttgcgc ttttcggtcg tgccgaacgc ggtctcgatc
     1081 ctggccgaat aggagatagc cccgggcaga ttcgaactgc cgtcgcgagg tctctcctcg
     1141 gcgtcttcgg ccgatccaga gcctcgaatc actggcccgc gaccgcgtgg cggtcacgat
     1201 tggccgctag accacggggc tgcaatcgcg attcaacgga gagggcgtat attgactttt
     1261 cttactgggc cgcttcactg agccgacgca atacccagtc cttctccagc accgcgagga
     1321 acggtgcggc ccgaggccct ttctc
//
LOCUS       DATLMA010000306         1048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_29712, whole genome shotgun sequence.
ACCESSION   DATLMA010000306 DATLMA010000000
VERSION     DATLMA010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29712"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VNA10_03890"
     CDS             <1..275
                     /locus_tag="VNA10_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013247727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HVG36850.1"
                     /translation="TFRCGDGYTTSHPLTALYDADVLLTYQWDGKPLPIEHGGPVRLL
                     VPKRYAYKSAKWVRAVTFTDEEELGYWEVRGYSNTADPLTEDRYSF"
     gene            342..>1048
                     /locus_tag="VNA10_03895"
     CDS             342..>1048
                     /locus_tag="VNA10_03895"
                     /inference="COORDINATES: protein motif:HMM:NF013097.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HVG36851.1"
                     /translation="MAKVASEEDRPSERRMTFFEHIEELRQRLRMIVIVVVALFIVNL
                     TTSVGAVTIGSTEVPMLLPALSPTSPNIATQFFIAMKNFLVPARVGPIPLNFSFKEPW
                     DAYVVMFKVAFFLAVVTGSPVIVYELGRFVGPALKPSERRLLVRITLPVLLLFLSGVL
                     LCFIVVLPFTFNLLFSVQNLLGANLLILYGDSFIDFVLLFTIAFGLAFQLPVLMYGLS
                     AIGIVSSEFWKKYWRFAA"
BASE COUNT          171 a          344 c          301 g          232 t
ORIGIN      
        1 cgacgttccg gtgcggcgac ggctacacga cgtcccaccc gctcactgct ttgtacgatg
       61 cagacgtcct cctcacatac cagtgggacg ggaaacccct cccgatcgag cacggcgggc
      121 ccgtgcgact cctcgtgccg aagcgatatg cgtacaagag cgcgaagtgg gttcgtgcgg
      181 tcaccttcac ggacgaggaa gagctcgggt actgggaggt ccgcgggtac agcaacaccg
      241 cggatccgct gaccgaggac cggtactcct tctgacgctc gcctgatgcg cgcatttgtg
      301 gaaactagat aagccgagcc ctcttggcag cgatgacggc cgtggcgaag gtcgcttcgg
      361 aggaggaccg cccgagtgaa cggcggatga cgtttttcga gcatatcgag gagctgcgtc
      421 agcgcctccg gatgatcgtc atcgtggtgg tcgcactctt catcgtcaac ctcaccacgt
      481 ccgtcggagc cgtcacaatc gggtcgacgg aggtgccgat gctcctgccc gccctcagcc
      541 cgacgagtcc gaacatcgcg acccagttct tcatcgcgat gaagaacttc ctcgtcccgg
      601 cccgagtcgg gccgatcccg ttgaacttca gcttcaagga accctgggac gcgtacgtgg
      661 tcatgttcaa ggtcgccttc ttcctcgcag tcgtcacggg atcgccggtc atcgtttacg
      721 agctcggtcg gttcgtcggc ccggcgttga agccgtcgga acgacgtctc ctcgtccgca
      781 tcaccctccc cgtcttgttg ctgttcctgt ccggcgtcct cctgtgtttc atcgtcgtcc
      841 tgccattcac gttcaacctc ctcttctccg ttcagaatct cctcggcgcg aacttgctca
      901 tcctgtacgg ggacagtttc atcgacttcg tcctcttgtt cacgattgcg tttggcctcg
      961 cgttccagct cccggtgctc atgtacggcc tcagcgccat cgggatcgtg tcctcggagt
     1021 tctggaagaa atactggcgt ttcgcagc
//
LOCUS       DATLMA010000307         5257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_819218, whole genome shotgun sequence.
ACCESSION   DATLMA010000307 DATLMA010000000
VERSION     DATLMA010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5257
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819218"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VNA10_03900"
     CDS             complement(<1..228)
                     /locus_tag="VNA10_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36852.1"
                     /translation="MSRVQAHKIRGTREERAAEPRSLLIVHATELLTLRGPAGPRRRE
                     AAGELGIVEDGALYAEGDRIVDVGSTVEVLGR"
     gene            complement(225..1148)
                     /gene="mvk"
                     /locus_tag="VNA10_03905"
     CDS             complement(225..1148)
                     /gene="mvk"
                     /locus_tag="VNA10_03905"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004496 - mevalonate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016126 - sterol biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HVG36853.1"
                     /translation="MAASAPGKLILFGEHAVVFGEPALSTAINLRAEVYARPHPEWRA
                     DGGSIDEPRYRYVKAAVAKVKTPGPLWLEIRSMVPSGAGLGSSAAVTVATLGALHGMG
                     GSIDAKTIAREGFEVEHEVQGRASPIDTSTASAGGGLLVLPTPRDGLLWTIERDARRW
                     CLHRTDLPPLDFVIGNTGISAATGPLVANVKERVDRSPQAADAVREIGRITLDGLDAL
                     RRNDLVAAGRLMDRNHALLNQLGVGHPMLDRLADAARKISYGAKLTGAGGGGSIVALS
                     DRPEQTTEAIRAAGGKAFVVRSDPIGVASLP"
     gene            complement(1188..3380)
                     /locus_tag="VNA10_03910"
     CDS             complement(1188..3380)
                     /locus_tag="VNA10_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008082696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDC48 family AAA ATPase"
                     /protein_id="HVG36854.1"
                     /translation="MAAGREKFLRVAEAKPADAGRGIVRIDPEVMKILELKEGDIVLI
                     EGAKSTAAGVRRGYPEDANRGVIRMDGMQRRNAGVGIDDKVGLRKAVARPAEKVSLAP
                     TEPIRIMGGEQYMAQVLQGRAITRGDVISVSVMGRKFDFVVTSFSPGADAVLVEAETE
                     VKIAEKPIKEEEAKVPKVDYEDIGGLGSEVRKVREMIELPLRHPELFERLGVEAPKGV
                     LLHGPPGTGKTLLAKAVASETNANFHSISGPEIMSKFYGQSEENLRDIFKQAEENAPS
                     IIFIDELDSIAPKRDEVMGEVERRVVAQLLALMDGLQARGKVVVIGATNRPNALDPAL
                     RRPGRFDREIEIGVPDRDGRLEILQIHTRGMPLSKDVDLKELAGLTHGYVGADVAALS
                     KEAAMRSLRRILPDIDLQADVIPPEILNRLTVTRDDFLQAYREMEPSTLREVLIENPN
                     VRWEDIGGLDEAKQELRESIEWPLRMNKVFAHFDARPPRGIIIFGPPGTGKTLLAKAV
                     ATESEANFISVRGPEFMSKWVGESERMVRETFRKAKTAAPCIIFFDEVDAITPVRGGM
                     EDSQVTERVISQILTEMDGLEELHNVTVIAATNRMDLVDPALLRPGRFDRHIYIAPPD
                     LATRKAILRIHARRKPLGKDVDLDDIARRTDRYTGAELAAVCNEAAMLAIRETATKYP
                     DLDEATLKKVTIEKRHFEAALKKVQPQTGDPSLYSRLPSRFPSSPEVS"
     gene            complement(3509..4021)
                     /locus_tag="VNA10_03915"
     CDS             complement(3509..4021)
                     /locus_tag="VNA10_03915"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HVG36855.1"
                     /translation="MERKNKEMQAKEEQTSLARTTVSPFAWLDDMDRWFDTFRRSFEE
                     RFWGGPLARWSDSGLRVREPLVDLIDKGSEFVVRAELPGVGKDDVDLTVTNDGIEIRA
                     ETNRSREEKEKNYQYRERTYQALHRVLGFPEEVKADLAAATLKDGVLEVRVPKKEPTS
                     EPKPVKVPVE"
     gene            complement(4150..4323)
                     /locus_tag="VNA10_03920"
     CDS             complement(4150..4323)
                     /locus_tag="VNA10_03920"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit K"
                     /protein_id="HVG36856.1"
                     /translation="MRYTRFEKARIIGARALQISMGSPILIDVPGGVVDPIEIAWVEF
                     NSGAIPITVKREM"
     gene            4630..>5257
                     /locus_tag="VNA10_03925"
     CDS             4630..>5257
                     /locus_tag="VNA10_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36857.1"
                     /translation="MRFVAMDQQTFRQAILLLSGEHSVSILRALRDGNWHLSSEVARS
                     IDIHITTASKFLQRFSELGLVDRRPHDARTFEYRLRSPHLRFEVDLDDEAGPLREVID
                     FYVAYFHSLFERIRFVGTPAIEIEMEHRLTTDHQELRKAVFEQMVDGSEAGLDRLREL
                     VAAVHRDLWNVCAQGLGSNAAKGVFQAALRDAIGAHPDLAFRAGLTRPL"
BASE COUNT          802 a         1784 c         1677 g          994 t
ORIGIN      
        1 tcgaccgagc acctccaccg tggaaccgac gtcgacgatc cggtcgcctt ccgcgtacag
       61 ggccccatct tccacgatcc cgagttcgcc ggccgcttcg cgtcggcgcg ggcccgccgg
      121 tcctcgcagg gtcagcagtt ccgtcgcgtg gacgatgagt agggaccgtg gttccgccgc
      181 tcgctcctcg cgggtccctc ggattttgtg ggcctggacc cggctcatgg aaggctcgcc
      241 actccgatcg gatccgacct gacaacgaac gcttttcctc cggcggcgcg aatcgcttcg
      301 gtggtctgct cagggcggtc cgaaagcgcg acgatgctcc cgcccccgcc cgccccggtg
      361 agcttcgcgc cgtagctgat ctttcgcgcg gcgtcggcga ggcggtcgag catcggatga
      421 ccgacgccga gttggttgag cagcgcgtgg ttccggtcca tcaggcgccc ggccgcgacg
      481 aggtcattcc gccgaagcgc gtccaatccg tccagggtga tccgtccgat ttcgcggacg
      541 gcgtccgcgg cctgggggga tcggtccact cgttccttga cgttcgcgac gagcggtccg
      601 gtcgcggcgc tgatcccggt gttgccgatg acgaagtcga gagggggcag gtccgtccgg
      661 tggaggcacc accggcgcgc atcccgttcg atcgtccaca gcagtccatc ccgaggggtc
      721 gggagcacca ggaggccgcc gcccgcgctc gcggtgctcg tgtcgatcgg gctcgcgcgc
      781 ccctggacct cgtgctcgac ctcgaagcct tcacgcgcga tcgtcttcgc gtcgatcgat
      841 ccgcccatcc catgcagggc cccgagggtc gccacggtca ccgccgcgga ggaccccagt
      901 cccgcgccac tcgggaccat cgaacggatc tcgagccaca gcgggccggg cgtcttcacc
      961 ttcgcgaccg cggccttcac gtaccgatac cggggctcgt cgatcgaacc gccgtccgcc
     1021 cgccattccg gatgcggccg ggcgtacacc tcggcccgga ggttgatcgc cgtgctcagg
     1081 gccggctcac cgaagacgac cgcgtgctct ccgaagagga tcagcttccc gggagcggag
     1141 gccgccatcg gcggcgattc cccccgaccc ggcttaatct ttcgggctca actgacttcc
     1201 gggctcgacg ggaaccggga cggcaagcga ctgtagagcg acgggtctcc cgtctgcggc
     1261 tggaccttct tcaacgcggc ttcgaagtgg cgcttttcga tcgtgacttt cttcagcgtc
     1321 gcctcgtcca ggtccggata cttcgtcgcg gtctcgcgga tcgcaagcat cgcggcctcg
     1381 ttgcacaccg cagcgagctc cgccccggtg tacctgtcgg tccgccgcgc gatgtcatcg
     1441 aggtcgacgt cttttccgag cggcttccgg cgcgcgtgga tcctgaggat cgccttgcgc
     1501 gtcgcgaggt ccggcggcgc gatgtagatg tgtcggtcaa accgtccggg tcggagcagc
     1561 gccgggtcga cgaggtccat ccggttcgtc gccgcgatga ccgtgacgtt gtgcagttcc
     1621 tcgagcccgt ccatctccgt gaggatctga gagatcacgc gctccgtgac ctgcgaatcc
     1681 tccatgccgc cgcggaccgg cgtgatcgcg tcgacttcgt cgaagaagat gatgcacgga
     1741 gccgcggtct tcgccttccg gaaggtctcc cggaccatcc gctccgattc gccgacccac
     1801 ttgctcatga attccgggcc gcggacggag atgaagttcg cctcggactc cgtggcgacg
     1861 gccttcgcga gcaatgtctt cccggtgccc ggaggcccga agatgatgat gccccgcgga
     1921 ggacgcgcat cgaagtgggc gaacaccttg ttcatgcgga gcggccattc gatcgattcg
     1981 cgcagttcct gcttcgcctc gtcgagaccg ccgatgtcct cccatcggac gttgggattt
     2041 tcgatcagga cctcccgcag cgtggacggc tccatctccc ggtacgcctg caagaagtcg
     2101 tcccgggtga ccgtgagccg gttcaggatt tcgggcggga tcacatcggc ttggaggtcg
     2161 atgtcgggga ggatgcgccg cagggatcgc atggcggcct ccttcgagag ggccgcgaca
     2221 tcggcgccga catatccgtg ggtgaggccc gcgagctcct tcaggtcgac gtctttcgac
     2281 aaaggcatgc cgcgcgtgtg aatctggagg atctcgaggc ggccgtcgcg atccgggacg
     2341 ccgatctcga tctctcggtc gaaccggccc ggccggcgca acgccggatc gagcgcgttc
     2401 gggcgattcg tggccccgat cacgacgacc ttgccgcgcg cctgaaggcc atccatcagg
     2461 gcgagcagct gcgcgacgac ccgccgctcg acctcgccca tgacctcgtc tcgcttcggc
     2521 gcgatcgagt cgagttcgtc gatgaagatg atgctcggcg cgttttcctc ggcctgtttg
     2581 aaaatgtccc gcaggttctc ttcgctctgt ccgtagaact tggacatgat ctccggcccc
     2641 gagatcgaat ggaagttcgc gttcgtctcg gatgcgacgg ctttggcgag gagcgtcttg
     2701 ccggtccccg gaggaccgtg caacaagacc cctttcggcg cttcgacgcc gagccgctcg
     2761 aacagctctg ggtgccgtag agggagctcg atcatctcgc ggacttttcg gacctcgctt
     2821 ccgaggccac cgatgtcctc gtagtcgacc ttcgggactt tcgcctcttc ctcttttatc
     2881 ggcttctcgg cgatcttgac ttccgtctcg gcttcgacga ggacggcatc cgcgccgggc
     2941 gagaacgatg tgacgacgaa gtcgaacttg cggcccatga cgctcacgct gatcacgtcg
     3001 ccgcgggtga tcgcgcggcc ttgcaagacc tgggccatgt actgctcgcc gcccatgatt
     3061 cggatcggtt cggtcggggc gagcgacact ttctccgcgg gccgggcgac ggccttgcgc
     3121 aggccgacct tgtcgtcgat cccgacgccc gcattgcgac gctgcatgcc gtccatccgg
     3181 atcacgccgc ggttcgcgtc ttcggggtat ccgcggcgaa ccccggcggc ggtggacttc
     3241 gcgccctcga tgaggacgat gtccccttcc ttcaactcga ggatcttcat gacctcgggg
     3301 tcgatgcgga cgatcccgcg gcccgcatcc gcgggtttcg cctcggcgac ccggaggaat
     3361 ttctcacggc cggcggccat cttcagcgtg cctccttgcg cgcggccgcg cgagcggcct
     3421 tcgcgtgatt tcgcaaggaa tcggcgttac ttgaactcat gtggaaacct cgaagcgaag
     3481 agagaaaggg aatgggtcaa gggccgagtc actcgaccgg caccttgacg ggtttcggct
     3541 ccgaggtcgg ctccttcttc gggacccgga cctcgaggac gccgtccttc agtgtcgcgg
     3601 cggcgaggtc ggccttgacc tcctccggga agcccagcac acggtggagg gcctggtagg
     3661 tccgctcgcg gtactggtag ttcttctcct tctcttcccg ggagcggttc gtctccgcgc
     3721 ggatctcgat cccgtcgttc gtgacggtca agtcgacgtc gtccttcccg acgcccggga
     3781 gttccgcccg gaccacgaac tcggaaccct tgtcgatcag atcgacgagg ggctcgcgca
     3841 cgcgcagacc ggagtcgctc cagcgggcga ggggacctcc ccagaagcgc tcctcgaagc
     3901 tccggcggaa ggtatcgaac caccggtcca tgtcgtccaa ccacgcgaag ggcgatacgg
     3961 tcgtcctcgc caggctcgtc tgttcctcct tcgcctgcat ctccttgttc tttcgctcca
     4021 tggtgcgtca cctccaaggg gtttttcgcg ttcaataatg tgtatgcggt tctatataaa
     4081 tactgcgatt cgaagtgcga attcctggcg cgtaccacgg ccggaatgga ccgacgccag
     4141 ccggagggcc tacatctccc gtttcacggt gatcgggatt gcgccgctgt tgaactcgac
     4201 ccacgcgatt tcgatcgggt caacgacccc gcccggcacg tcgatgagga tcggcgatcc
     4261 catgctgatt tggagcgccc gcgctccgat aatgcgagct ttctcaaatc gcgtgtaacg
     4321 catcgggtgt ccctcgcacc gggccgcggg cgaaggggtc gactatcgat cgggcgggac
     4381 ggccgtaggg ggcccgaatc gggtacccat acttcaacct tgctcagcat ccgctcggag
     4441 aacaattcga tcgaggggcg gggaggagtc gaattcctgc atcgccaacg gtggacccgt
     4501 gacgggtgcg tgcccacccg aattcgttcg ttctttccct agataatcga ggctgagaat
     4561 cccgggacat cccttaagac cccccaactc cacgatgaat agacttcgcc gcgcacggcg
     4621 cgcgccagct tgaggttcgt cgcgatggac cagcagacat tccggcaggc aatcctgctc
     4681 ctctccggcg agcacagcgt ctcgatcctc cgagcgctgc gcgacgggaa ctggcatctg
     4741 tcgagcgagg tcgcgcggtc catcgacatt cacatcacga cagcatcgaa gttcctgcag
     4801 cgcttctcgg aactcgggct cgtcgaccgc cgcccgcacg acgcccgcac gttcgagtat
     4861 cgcctgcggt ccccgcatct gaggttcgag gtcgatctcg acgacgaggc gggtccccta
     4921 cgcgaggtga tcgacttcta cgtcgcatac ttccactcgc tcttcgaacg catccggttc
     4981 gtcggcacgc cggcgatcga gattgagatg gagcatcgtc tcacgacgga ccaccaggag
     5041 ctccggaagg ccgtcttcga acagatggtc gatgggagcg aggcggggct ggaccgcctc
     5101 cgggaactcg tcgcggccgt ccaccgggac ctctggaacg tctgcgcgca gggactggga
     5161 tcgaatgccg cgaaaggcgt cttccaagcg gccctccgag acgcgatcgg cgctcacccg
     5221 gacctcgcat tccgcgccgg cctgacccgt ccattgg
//
LOCUS       DATLMA010000308         1941 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_693492, whole genome shotgun sequence.
ACCESSION   DATLMA010000308 DATLMA010000000
VERSION     DATLMA010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693492"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VNA10_03930"
     CDS             complement(<1..720)
                     /locus_tag="VNA10_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36858.1"
                     /translation="MSRPILRLATRLTRRTRATAWAIAFACMVLVGALSLADGLANGV
                     GSVANRIGTGPAVYVQGGELLASAIDPAALSSVSGDFVAMRAHAAGLEINGLTLSVFV
                     IALESYHAGVGTPGFPLGPRNVSLDVGLRDQIQSESGMPVASSGNLSLFGLHLTDLPI
                     VAPPPTRSPLFPDDWVYVRPDLLIAMNVTRGGPVQAILAAAPLDQAVIASLRLTRLET
                     LGAIGFVRGSVAEVQFSLALLA"
     gene            841..>1941
                     /locus_tag="VNA10_03935"
     CDS             841..>1941
                     /locus_tag="VNA10_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36859.1"
                     /translation="MRAESATKVAKEDVWDQVSALVGRFGQAAEQWAARFDFGISAEV
                     IRGCLEPILSDARRIQLAGWGALPGGPALQECLARLRDLAPKTYQKTVARIAGVFVIH
                     SYFRSRMTHEAIAQAISTGSFYELTQDLLDDLLDGGGWTVREAVRLHDRCLRPMTDSA
                     VSTDGLDDELANFMGPGQDGLEQVLAGATRALRGLLASSDDRIRRLVHEGHDALGRAQ
                     AATVHFRREGLNIPAVTNIAASLPSPDSHLPWLDRLAICASWPSNIALFDAGFTSAAV
                     PQRELAAHARAWLFFDEAVTFLEHFAGAAADLREGVFNVACVYANLPATILEEDSFGG
                     FTSPQRHSIFEKATECLVRAVRDGIAGGGPPDE"
BASE COUNT          354 a          648 c          624 g          315 t
ORIGIN      
        1 cgcgagcaac gcgagtgaga actggacctc cgcgacgctc ccacggacga acccgatcgc
       61 gccgagcgtc tcgagtcgcg tcagccggag agaggcaatg accgcctggt ccaacggtgc
      121 ggcagccagg atagcctgca caggcccacc ccgcgttacg ttcatggcga tcaagagatc
      181 cggccggacg tagacccagt catccggaaa cagcggcgaa cgcgtcggcg gcggggcgac
      241 gatcgggagg tccgtgagat gcaacccgaa caggctcagg ttccccgaac tcgcgaccgg
      301 catcccgctc tcggattgga tctgatcccg caatccgacg tcgagggaga cgttgcgcgg
      361 accgagcggg aatccgggag ttccgacacc ggcgtgatac gattcgaggg cgatgacgaa
      421 tacggagagc gtgagaccgt tgatctccag gcccgcggca tgggccctca tcgcgacgaa
      481 gtcgccgctc acgctcgaga gcgcggccgg gtcgatcgca ctcgcgagga gctcaccccc
      541 ctggacgtag acggccgggc cggtcccgat ccggttcgcg accgatccga cgccgttcgc
      601 caagccgtcg gcgaggctca gcgccccgac gaggaccatg cacgcgaacg cgattgccca
      661 cgccgtcgcc cgcgtgcgtc gcgtaaggcg ggtcgcgagg cgaaggatgg gtctcgacat
      721 gcccgccgcg gaaccggtct cgcacaataa acgttcgatg cctctggttg cggattggtc
      781 acggtctggt cactttctcc atgaccccct ggtgctttcc aaacctcaat gaaccgaaca
      841 atgcgggcgg aatcggctac aaaggtcgcg aaagaggacg tctgggacca agtctcggcg
      901 ctcgtcggcc gcttcggcca ggccgcggaa caatgggcgg cacgattcga tttcggcatc
      961 tcagcggagg tgattcgcgg ttgcctggaa ccgattctaa gcgatgcccg acggatccag
     1021 ttggcgggat ggggggcgtt gccgggcggg cccgcgttgc aggaatgcct tgcgagattg
     1081 cgcgacctcg ctcccaagac gtatcagaaa acggtggcgc ggatcgcggg cgtgttcgtc
     1141 atccactcct acttccgatc ccggatgacg cacgaggcca ttgcccaggc catttcgacg
     1201 ggttccttct acgagttgac gcaagatctc ctcgatgacc tgctcgacgg aggaggctgg
     1261 acggtccgcg aagccgtccg acttcacgac cgatgcctcc gccccatgac cgattccgcg
     1321 gtctcgacgg acggactcga cgacgagctg gcgaacttca tgggaccggg gcaggatggc
     1381 cttgaacagg tcctggcggg tgccacgcga gccctgcggg gactcctcgc ttccagcgat
     1441 gaccggatcc gcaggctcgt gcacgaaggc cacgatgccc ttggccgtgc ccaggcggcc
     1501 accgtccact tccgacgcga gggactcaac atccccgcgg tcacgaacat cgcggcgagc
     1561 ctgccgtcgc ccgattctca cctgccttgg ctcgaccggc tcgcaatctg cgcgtcatgg
     1621 ccctcaaaca tcgccctgtt cgacgcggga tttacttcgg ccgcagtgcc gcaacgagaa
     1681 ctggccgccc atgcccgcgc ctggctcttc tttgacgagg ccgtcacctt cctggaacac
     1741 ttcgcgggag ccgcggccga ccttcgcgaa ggagtgttca acgtcgcatg cgtctacgca
     1801 aacctcccgg ccacgatcct tgaagaggac tcgttcggag gattcacgtc gccacaacgt
     1861 cattcgatct tcgagaaagc gaccgagtgc ctcgtccgcg ccgtgcgcga cggaatcgcg
     1921 ggaggtggac ctcccgatga g
//
LOCUS       DATLMA010000309         1362 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_450944, whole genome shotgun sequence.
ACCESSION   DATLMA010000309 DATLMA010000000
VERSION     DATLMA010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450944"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VNA10_03940"
     CDS             <1..878
                     /locus_tag="VNA10_03940"
                     /inference="COORDINATES: protein motif:HMM:NF019307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HVG36860.1"
                     /translation="IANDYSEDLRGVPTIYLGVKGCLYLTIWSRGNPQAGGPMDSEIH
                     SSNAVWIGSPVWRLLQALNTLVDGEQRPAIDGIWDDVVPPTKQDSAMVKALAKTFDPS
                     AWLQEERTAKFKFDLPKDQLLLKYLFEPTVNICGIYSGYIEHGGTKTVLPHEAYAKID
                     IRLVKDMTVEGTLRKLRAHLKKRGYDDLRIEVHGPYGPAKTDPGSWIAKAAVEAVEAN
                     GKQPEIWPSSGGTMPAFAFDEYLKLPWVSMGLGHGSRAHAPNEYASIDGMKRFMAGEA
                     TLLYAAARRAPKRPR"
     gene            1008..>1362
                     /locus_tag="VNA10_03945"
     CDS             1008..>1362
                     /locus_tag="VNA10_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36861.1"
                     /translation="MGRWNVYEEYSSGGFMRILIRDIRRDEAGVASTVGTIMALLVFL
                     TFLSLIVNQYVPVWMKDSEASHMNGSLGQFGGIKGAIDLQILAAQAAQITGTHYIPVT
                     ASSAVSLGVDGVPIFA"
BASE COUNT          283 a          425 c          426 g          228 t
ORIGIN      
        1 cgatcgcgaa cgattactcg gaggacctgc gcggcgtgcc gacgatctac ctgggcgtca
       61 aagggtgcct ctacctgacg atctggtccc gcggcaaccc gcaggccggc ggcccgatgg
      121 acagcgaaat ccacagctcg aacgcggtgt ggatcggctc ccccgtctgg aggctgctgc
      181 aggcgctcaa caccttggtc gacggcgagc agcgtccggc catcgatgga atctgggacg
      241 acgtcgtccc gccgacgaag caagattccg cgatggtgaa ggcccttgcg aagacgttcg
      301 acccgtccgc ctggctccag gaggaacgga cggcgaagtt caagttcgat ctgccgaagg
      361 atcagctcct cctgaagtac ctgttcgagc cgaccgtgaa catctgcggc atctactccg
      421 ggtacatcga acacggaggc acaaagacgg tgcttccgca cgaggcgtac gcgaagatcg
      481 acatccgatt ggtcaaagac atgaccgtcg aagggacgct gcgcaaactg cgcgcccacc
      541 tgaagaagcg tggatatgac gacctgcgga tagaagtgca cggtccctat ggccccgcga
      601 agaccgaccc ggggtcgtgg atcgcgaagg ccgcggtcga ggcggtcgag gcgaacggaa
      661 agcaaccgga gatctggcct tcgagcgggg gcacgatgcc cgccttcgcc ttcgacgaat
      721 acctcaagct gccatgggtt tcgatgggcc tgggccatgg atcccgggcc catgcgccga
      781 acgaatacgc gtcgatcgac ggaatgaaac gtttcatggc cggcgaagcg acgctcctct
      841 acgccgccgc gaggcgggcg ccgaaacggc cgcgataggc gttcggaaac cacgctgaaa
      901 acaccttcga aatcgcgggc ccaaaatggc ccctctcaca tggagaaaat caactcattc
      961 tcaaggtcag attttcagcg cgacacctat aaatagcgtc atccaggatg ggccgatgga
     1021 atgtctacga ggaatactcc tcaggtggct tcatgcgtat tctgatccgc gacattcgcc
     1081 gggacgaggc tggggtcgcc tcgaccgtcg gtacgatcat ggccctgctc gtgttcctca
     1141 cgttcctcag cctcatcgtg aaccagtacg tgcccgtctg gatgaaggac tccgaggcgt
     1201 cccacatgaa cggatccctg ggccagttcg gcggcatcaa aggggcgatc gacctccaga
     1261 tcctcgcggc gcaggccgcc cagatcacgg gaacccatta catcccggtg acggcctcgt
     1321 ccgcggtgag cctcggggtc gacggggtgc cgattttcgc gg
//
LOCUS       DATLMA010000310         2014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_512094, whole genome shotgun sequence.
ACCESSION   DATLMA010000310 DATLMA010000000
VERSION     DATLMA010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512094"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VNA10_03950"
     CDS             <1..301
                     /locus_tag="VNA10_03950"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HVG36862.1"
                     /translation="GGHLVPCEEPSAALVRELQEELGITALRPRFLGIYEDVDPTSKD
                     LFRHYLFFVTRWTGDPKIANEEHSEVRWFTPEEAGQLNLAPSLKDAIRRVLPKKP"
     gene            334..753
                     /locus_tag="VNA10_03955"
     CDS             334..753
                     /locus_tag="VNA10_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018084818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HVG36863.1"
                     /translation="MVDEIQVKKILSDIRTIAVVGCSKDPAKDAHRVPKYMQMNGYRI
                     IPVNPTATEILGEKAYPSLDAVPIPFDAVDIFRPSADVPPIVDQAVKTPAKVIWMQLG
                     IRNEAAARKAQAAGKIVIQDRCMMRDHARLFGKTILE"
     gene            complement(727..1350)
                     /locus_tag="VNA10_03960"
     CDS             complement(727..1350)
                     /locus_tag="VNA10_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36864.1"
                     /translation="MGWRALLRVVDFQALLSSQPLVASALEKAQHTGGPKSPEAKALR
                     ESYYLLAKVLWTRRASIRRIHDLAWLDHTVVSAGARLGRVWENSDGSRSIRAAEEALP
                     PGVSPELFPQEGSNWIEVPVQAFSGINPNVKLERGVSDPFRVGIVPEARLRPWYEAVT
                     TAKFKAPPAAVTVLGEIEALISAARRAGGPSVAVVFAASSFEDRLAE"
     gene            complement(1398..1898)
                     /locus_tag="VNA10_03965"
     CDS             complement(1398..1898)
                     /locus_tag="VNA10_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HVG36865.1"
                     /translation="MWARFRHYFKGFPAQEKVAQLMVMYGLRVHEGSVYAAEIKLSDT
                     AMARAAGVDRRVVTATVDTIDKNEELRSFFDALRPVCHLREIAPLMNWGAIEIVPTNA
                     SKPGILAGVAAIIAQAGISIRQVIMDDPEIVDDPHGFIVTEAPVPERLLPQIKQVDGV
                     KSVVLH"
BASE COUNT          373 a          659 c          632 g          350 t
ORIGIN      
        1 cggcggacat ctggtcccgt gcgaggaacc ctcggccgct ctggtccgcg aacttcagga
       61 ggagttgggc atcaccgcgc tccggccccg gttcctcggg atctatgagg acgtcgatcc
      121 gacgtccaag gacctcttcc gtcactacct gttcttcgtc acccgctgga ccggggatcc
      181 gaaaatcgcg aacgaagagc actccgaggt ccgttggttc acccccgagg aagcgggaca
      241 actgaatctc gcgccgagcc tgaaggacgc cattcggcgc gtcctgccaa agaaacctta
      301 atcgcgacgc atgtgttcaa tcgagacgag cctatggtcg acgagatcca ggtcaagaaa
      361 atcctgagcg acatccggac gattgcggtc gtcggttgct ccaaggatcc cgcgaaggac
      421 gcgcaccgcg tcccgaagta catgcagatg aatggctacc ggatcatccc ggtgaatccg
      481 accgcgaccg agatcctcgg tgagaaggcc tacccgtccc tcgatgccgt gccgatcccg
      541 ttcgatgccg tcgacatctt ccgtccatcc gcggacgtgc cgccgatcgt ggaccaggcc
      601 gtcaagaccc ccgcaaaggt catctggatg caactcggga ttcgcaacga ggccgccgcg
      661 cggaaggccc aggccgcggg caagatcgtg attcaggacc gatgcatgat gcgcgaccac
      721 gcgcggttat tcggcaagac gatcctcgaa tgacgaggcc gcgaacacga ccgcgacgct
      781 cggtccgccg gcacgtctcg ccgcagagat gagcgcctcg atctctccga ggacggtcac
      841 cgccgccgga ggtgccttga acttcgcggt ggtcacggct tcgtaccagg gacggagtcg
      901 ggcttccggc acgatcccga cgcggaacgg atcggagacg ccccgctcga gcttgacgtt
      961 cgggttgatt cccgagaacg cctgcaccgg gacctcgatc cagttggatc cctcctgagg
     1021 gaacagttct ggcgatacgc ctggcgggag ggcctcctcc gccgcccgga tcgaccggct
     1081 cccgtcggag ttctcccaga cccggccgag gcgagccccc gccgatacga cggtatgatc
     1141 gagccacgcg aggtcgtgga tccgccggat cgacgcccgt cgggtccaca ggactttcgc
     1201 caggagatag tacgactcgc ggagtgcctt cgcctccggg gacttcgggc ccccggtgtg
     1261 ctgcgccttc tcgagcgccg aggcgacgag gggttgcgac gagagcaacg cctgaaagtc
     1321 gacgacccgg aggagcgctc gccatcccac ggcaccgcca cgggtctcgg caagaaaagg
     1381 gtgtcggcgg cgggcgctca atgcaagacg acggacttga cgccgtccac ctgcttgatc
     1441 tgcgggagca gccgctcggg cacgggcgcc tccgtgacga tgaatccgtg cgggtcatcc
     1501 acgatttccg gatcgtccat gatgacttga cggatcgaga tccccgcttg cgcgatgatc
     1561 gccgcgaccc cggccaggat gcccggcttc gaggcgttcg tcgggacgat ctcgatggcg
     1621 ccccagttca tcagcggcgc gatttcgcgg aggtggcaga ccggccgaag ggcatcgaag
     1681 aacgaccgca gctcctcgtt cttgtcgatc gtgtcgacgg tcgcggtcac gacgcgccgg
     1741 tcgacgccgg cggcccgcgc catcgcggtg tccgagagct tgatctcggc tgcgtacacg
     1801 ctcccctcat ggacccgcag gccgtacatg accatgagct gcgcgacctt ctcctgcgcc
     1861 gggaatcctt tgaagtagtg acgaaatcgc gcccacatgc tttcggccca atgtgcggaa
     1921 gggtgcgcta tgggttaatg ttttcgtcat caagtgtaga atcatgtacg ttgacgaaca
     1981 gaatcgttat atattgtcca aataatcctc cttt
//
LOCUS       DATLMA010000311         1350 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_693950, whole genome shotgun sequence.
ACCESSION   DATLMA010000311 DATLMA010000000
VERSION     DATLMA010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693950"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..668)
                     /locus_tag="VNA10_03970"
     CDS             complement(261..668)
                     /locus_tag="VNA10_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003105074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HVG36866.1"
                     /translation="MADWNTRVIDEFHAKRGRGVGTWGDNLLLLTTRGAKTGQVRTTP
                     LVYHRDGERYVIAASKGGAPTHPGWYHNLVKHREAEIEVGTEKFKVRATPIPKGPERD
                     RLYEAHGNVYAGFRDYPKKTKRVIPVVVLERIP"
BASE COUNT          243 a          396 c          415 g          296 t
ORIGIN      
        1 ttaagcggtg gtcggacgtt tttcggggat tggcttaccg gagggatatt cgaatcacct
       61 tgatagacct gaggatcggt ggagcgggcg atgggatttg aacccgcgac cctcggtgct
      121 tgggaagcct ctcgatgctt cttcgctgtt gtcggtatcg tttgtcgacg tttggaatgc
      181 gcgccgaact tcagcccgtg ggtaaagtcc tcgcagatcc gagccgacgg catcctcaat
      241 tttgcagaga cgatgggtac ctaggggatc cgctctagga cgacgaccgg gatgactcgt
      301 ttcgtcttct tcgggtagtc gcggaatccc gcatacacat tgccgtgcgc ttcgtagaga
      361 cgatcgcgct cgggtccttt cgggatcggc gtcgcgcgta ccttgaactt ctccgtgccg
      421 acctcgattt cggcctcgcg atgcttcacg aggttgtggt accagccggg atgcgttggc
      481 gcgccgccct tcgatgccgc gattacgtag cgctcaccat cacggtggta gacgagcggc
      541 gtcgtgcgca cctgtccggt cttcgccccg cgcgtcgtaa ggagcagaag gttgtcgccc
      601 caggtcccga cgcctcttcc ccgcttcgcg tggaactcgt ctatgacgcg cgtgttccag
      661 tccgccacgc ccaaccgaac gtgtcgatgt ccgccgctat tccctccgtc tgtgcagatc
      721 gtcgagaggg ccggacctga ataccctaat gcatgccggg gaaccatgtg ccgcaggctt
      781 ggtccccctc gagtgctcaa aggcgagcag actaacccgg acgcccagag ggggaagcct
      841 tcagcagacc actcgccggc gagagagagt tccggtctat gaccgggacc cgactctaga
      901 agcggtggtt aagcggtggt aggggttttt ctaagggact gactgggtga gaggatacgc
      961 gatcgccttg atagaccttg ggattcatgg agcgggcgac gggatttgaa cccgcgaccc
     1021 tcggcttggg aagccgcatc gatgttgttt cgctaccgta cgccatcatt cgccgacgtt
     1081 cgaaatccgt ggaaatactg agtttcttga tcttccgagt cttcgccgtt gttcgccgaa
     1141 ggacgttacc gttcgcccgt taagcggtgg ttgcaacgat ggtggatccc cgagtcatta
     1201 ttcgctcgcc gcctaacctc gtcctcacaa tctggtggca atgtactcag cgaggtattc
     1261 ggcgtccctg ccgacgccgc gcacgaagga cgaaagcaaa gtgtgcagcc acctaagccc
     1321 aaggaagtac aagcccgagc ggcgcgtcac
//
LOCUS       DATLMA010000312         1731 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_693967, whole genome shotgun sequence.
ACCESSION   DATLMA010000312 DATLMA010000000
VERSION     DATLMA010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693967"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VNA10_03975"
     CDS             <1..651
                     /locus_tag="VNA10_03975"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HVG36867.1"
                     /translation="VIGLVMPALYVLSTGIRSGVALEEMSLGIAGILLLAYVFGLFFS
                     LRTHRDIFNPVTEVAEKPRWEKRFALSVLVASTILVAVESEILVGSLEIARESLGLTD
                     LFVGVIIVAIVGNAAEHGSAILMAWRNKMELSVAVATTSTTQVALFVAPILVFVSLLT
                     AQVMTLDFEIFELASLVLATAVVAAVVSDGRSNWYEGALLVMVYAVVAVAFLFHPP"
     gene            656..>1731
                     /locus_tag="VNA10_03980"
     CDS             656..>1731
                     /locus_tag="VNA10_03980"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG36868.1"
                     /translation="MTTRRSLAYGLTANVVILGVVSLFTDVSSEMILPILPFFLIQVL
                     GANAFIVGLEEGFSDSVVSFMKIVSGRFSDAAGRRKRFVGAGYALSTAMKVLFPFAQS
                     WPQFIGLRVIERTGKGVRDAPRDALLTESTPPETRGKAFGFHRSMDTTGAILGPLVTL
                     VLLGTVAASLSIAEQYRLVLLLAAIPAVISVLIVVLVREPQRARVPTQTLRVAFRGIP
                     RPLLTFIAIASLFSFADFSYAFLLLRAGQTNGTTVVILLYVLYNIVYAAHAFPAGILS
                     DRVGRKPVVLFGYVAFIGMATLLVFSDALFVLVIAFILYGLEYGMAEGTQRALVADFA
                     PPDIKATVLGAYHTSVGLVKLASG"
BASE COUNT          252 a          583 c          516 g          380 t
ORIGIN      
        1 gtcatcggcc tcgtgatgcc cgcgttgtac gtgctctcca cggggatccg ctcgggcgtg
       61 gccctcgaag aaatgagcct gggcatcgcc gggatcctgc tcctcgccta cgtgttcggc
      121 ctgttcttct ccctgcggac gcatcgggac atcttcaatc cagtcaccga ggtcgctgag
      181 aaaccgcgtt gggaaaaacg gttcgcgctg agcgtcctcg tggcatcgac aatcttggtc
      241 gccgtcgaga gcgagatcct ggtcggttcc ctggagattg cgcgggagag cctcggcctc
      301 accgatttgt tcgtcggagt catcatcgtg gccatcgtcg gcaacgccgc agaacatggg
      361 agtgcgatcc tcatggcctg gaggaacaag atggaactga gcgtcgccgt cgcgacgacg
      421 tcgacgaccc aggtcgcgtt gttcgtggcg ccgattctcg ttttcgtttc tctcttgacc
      481 gcgcaggtca tgactctcga ctttgaaatc ttcgagctcg cctccttagt cttggcgacc
      541 gccgtcgtcg cggccgtcgt ctcggatgga cgaagcaact ggtacgaggg ggcattgctc
      601 gtgatggtct atgcggtcgt cgcggtcgcg ttcctcttcc atccgccgtg agcccatgac
      661 cacccgccga tccctcgcat acggactcac cgcgaacgtg gtcatcctcg gtgtcgtgtc
      721 tctattcacc gacgtcagca gcgagatgat cctgccgatc ctcccgttct tcctgatcca
      781 ggtcctcggg gcgaacgcgt tcatcgtcgg cctggaggaa gggttctcgg acagcgtcgt
      841 ctcgttcatg aagatcgttt cgggacggtt ctccgacgcg gcggggcgaa ggaagcgttt
      901 cgtcggcgcg ggctacgcgc tttccaccgc gatgaaggtc ctcttcccct tcgcccagag
      961 ctggcctcag ttcatcggac tgcgcgtgat cgaacgcacg ggaaagggtg tccgggatgc
     1021 cccgcgcgat gccctcttga cggagtcgac tccccccgaa acgcgcggga aagcgttcgg
     1081 attccaccgc agcatggaca ccaccggcgc catcctgggc ccccttgtca ccctggtctt
     1141 gctcgggacc gtcgcggcat ccctgagcat cgccgagcag taccgtctcg tcctcctgct
     1201 cgcggcgatt cccgccgtca tctccgtcct cattgtggtc ctcgtccgcg agccgcagcg
     1261 ggcgcgcgtg ccgacgcaaa ctcttcgtgt tgccttccgc gggatcccac ggccgctcct
     1321 caccttcatc gcgatcgcga gtctgttctc attcgcggac ttctcgtatg cgttcctcct
     1381 cctccgggcc ggccagacga acggcacgac ggtcgtgatc ctcctctacg tgctgtacaa
     1441 catcgtctat gcggcccacg cgttccccgc ggggatcctc tccgatcggg tcggacgaaa
     1501 gccggtggtg ctcttcgggt atgtcgcgtt catcgggatg gcaacgctcc tcgtcttctc
     1561 ggatgcgctc ttcgtccttg tgatcgcgtt catcctctac ggcctggaat acggcatggc
     1621 cgagggaacg caacgcgccc tcgtcgcgga cttcgctccg cccgacatca aggcgaccgt
     1681 ccttggcgcg taccacacga gcgtcggcct cgtgaagctc gcatcgggtt t
//
LOCUS       DATLMA010000313         1413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_30679, whole genome shotgun sequence.
ACCESSION   DATLMA010000313 DATLMA010000000
VERSION     DATLMA010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30679"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VNA10_03985"
     CDS             complement(<1..285)
                     /locus_tag="VNA10_03985"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HVG36869.1"
                     /translation="MSAFVTTNEGKFREVSTKMGEAHIKLVHEDRTYPEIQTDRLEKV
                     VRFAATILDDQIHGDYLIDDSGLFLEEFGGFPGVYSSYVYKRLGCAGVLKL"
     gene            complement(282..893)
                     /locus_tag="VNA10_03990"
     CDS             complement(282..893)
                     /locus_tag="VNA10_03990"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF011463.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex kinase/ATPase Bud32"
                     /protein_id="HVG36870.1"
                     /translation="MLVKRGAEAELRTTEFLGRPAIEKYRRAKAYRLDVLDDELRRSR
                     IRHETRLMAEARAAGVAVPILYDIDLVENKIVMEFVDGPTAKDVLDEGGPRAMKVAGA
                     IGEIVGRLHRAGIIHGDLTTSNMIVRDARIVMIDFSLGGKEDGVEARGVDLHLLKEAL
                     GSAHARAASYYRAALKGYRRTMGKAAEDVISKVKEIESRGRYT"
     gene            954..>1413
                     /gene="aac(6')"
                     /locus_tag="VNA10_03995"
     CDS             954..>1413
                     /gene="aac(6')"
                     /locus_tag="VNA10_03995"
                     /EC_number="2.3.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015249247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047663 - aminoglycoside
                     6'-N-acetyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside 6'-N-acetyltransferase"
                     /protein_id="HVG36871.1"
                     /translation="MTKPHESALRIRRAEASDRTEWMRMRAALWPEYTPEDHRNELDE
                     YLEEKSAAAFVAERPDGGLAGFVEATIRPYADACDTSPVGYVEGWYVDPDVRLSGVGR
                     RLVRTAERWARGRGCSEMGSDCLVENEGSLRAHLAIGYEERERLIHFRRWL"
BASE COUNT          240 a          454 c          448 g          271 t
ORIGIN      
        1 cagcttcagg accccggcgc acccgaggcg cttgtatacg tacgacgaat agacgccggg
       61 gaagccgccg aactcctcga ggaacagtcc ggagtcatca atcaggtagt cgccatggat
      121 ctggtcgtcg aggatcgtcg cggcgaaccg gacgaccttc tcgaggcggt ccgtctggat
      181 ctcaggatac gtgcggtcct cgtgcacgag cttgatgtgg gcttcgccca tcttcgtcga
      241 gacctcgcgg aacttgcctt cgttcgtcgt cacgaatgcg ctcacgtata gcgaccccgc
      301 gactcgattt ccttcacctt tgagatgacg tcttcggccg ccttccccat cgtcctgcga
      361 tagcccttca gggccgcccg gtaatacgat gccgcgcgcg catgcgcgct ccccagggcc
      421 tctttcagga ggtggaggtc gacgcccctc gcttccacgc cgtcttcttt tccgccgaga
      481 ctgaagtcga tcatgacgat tcgagcatct cggacgatca tgttcgacgt cgtcagatcg
      541 ccgtggatga ttccggcccg gtggagacgt ccaacgatct cgccgatcgc acccgcgact
      601 ttcatcgcgc gaggccctcc ctcgtcgagt acatccttcg cagtcggacc gtcgacgaac
      661 tccataacga tcttgttctc cacgagatcg atgtcgtaga gaatcggcac cgcgaccccg
      721 gcggctcggg cctcggccat gaggcgcgtc tcatgacgga ttcgagaccg gcgcagttcg
      781 tcgtcgagga cgtcgaggcg gtacgctttc gccctccggt atttctcgat ggcgggccgt
      841 ccgaggaact ccgtcgtccg gagctccgcc tccgcgcccc gtttgacgag cacgcggtgc
      901 gatgcgaggc ggccgagaaa aacctttcat cgcgtcgtcc atctgggcga tcgatgacca
      961 aaccgcacga gtcggcccta cggattcgtc gcgccgaagc gagcgatcga accgagtgga
     1021 tgcggatgcg cgccgccctc tggcccgagt acacgcccga ggatcaccgc aacgagctgg
     1081 acgaatatct cgaggaaaaa tcggcggcgg cctttgtggc cgagcgtccc gatggcggcc
     1141 tggcgggttt cgtggaagcc acgatccgtc cctatgcgga cgcgtgcgac acgagcccgg
     1201 tcggttatgt cgaaggttgg tacgtggacc ctgacgtgcg gctcagcgga gtcggacgtc
     1261 ggctcgttcg gaccgccgag cggtgggctc gcggacgcgg ctgcagcgag atgggttccg
     1321 attgtctcgt ggagaacgaa ggcagcctgc gggcgcatct cgcgatcggg tacgaagagc
     1381 gggaacggct catccatttc cgacgatggt tgg
//
LOCUS       DATLMA010000314         1189 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_757077, whole genome shotgun sequence.
ACCESSION   DATLMA010000314 DATLMA010000000
VERSION     DATLMA010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757077"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..747)
                     /locus_tag="VNA10_04000"
     CDS             complement(196..747)
                     /locus_tag="VNA10_04000"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG36872.1"
                     /translation="MTKQKQLKSKICLVGDKAVGKTSLIRRYTINMFDEEYLTTIGTH
                     VTKKEARILLPEYDLLLDLDMTIWDIMGEKGFRELLKDAYFYGANGILAVADLTRRRT
                     LDNLDDWIDGVEDVVGKVPILIAVNKSDLVSSARFREIDIAAFAKAYHAEFFLTSAKT
                     GARVEDVFRRLGALVAEQQLQLA"
     gene            complement(826..>1189)
                     /locus_tag="VNA10_04005"
     CDS             complement(826..>1189)
                     /locus_tag="VNA10_04005"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36873.1"
                     /translation="WDIMGEKGFRDLLKEAFFHGAKGVVAVCDLTRYSTLKELDDWVQ
                     SVFNVVGEIPVVYAINKIDLKDEVMILYGDKEIEQAVRAFEAPYFYASAKTGENVEVL
                     FRRLGTMVLQREGMAVAT"
BASE COUNT          208 a          393 c          324 g          264 t
ORIGIN      
        1 cctggctttc accctgggtc tttgcgtgag catgggcatt ccgatcggtc ccccctgctc
       61 ccgcccgtga ccatttacgt tcatccgcgc agccgatgac gttcggggag cgcaaccatc
      121 tgagcgtgcg tacttaatga tttcgaaaaa tctgttcgag aaccttggaa cattcctcgg
      181 attgttgcgg aaagtctacg cgagctggag ttgctgttcc gcgacgagcg ccccgaggcg
      241 gcggaacacg tcctcgacgc gcgcacctgt cttcgccgac gtgaggaaga attcggcatg
      301 gtacgccttc gcaaacgcgg cgatgtcaat ctctcggaaa cgtgcgctcg agacgaggtc
      361 cgacttgttg accgcgatca agatcggcac cttcccgacg acgtcctcga cgccgtcgat
      421 ccagtcgtcc aggttgtcga gcgtccgacg ccgcgtgagg tcggcgaccg cgaggatgcc
      481 gttggctccg tagaagtacg cgtctttcaa gagttcccgg aatcccttct cccccatgat
      541 gtcccatatc gtcatgtcca ggtccaagag gagatcgtat tccggcagca ggatgcgggc
      601 ctctttcttc gtcacatggg tcccgattgt cgtgaggtat tcctcgtcaa acatattgat
      661 cgtgtagcgg cggatcaacg acgtcttgcc gaccgccttg tccccgacga gacagatctt
      721 cgacttcagc tgtttctgct ttgtcatccg atgtcctcgc ccggaaccgc ggcccgactt
      781 cggcgctgcc tacttaacga ttctcgcgtt gttctcccgg ctgattcacg tcgcgaccgc
      841 catgccctcg cgctggagga ccattgtgcc gagccgccgg aagagaacct ccacgttctc
      901 ccccgtcttc gccgaggcgt agaagtacgg cgcctcgaac gcccgcacgg cctgctcgat
      961 ctccttgtcg ccgtacagga tcatgacctc gtccttcaag tcgatcttgt tgatcgcata
     1021 caccactggg atctcgccga cgacgttgaa gacgctctgc acccagtcgt cgagctcctt
     1081 cagcgtcgag taccgcgtga ggtcgcacac cgcgacgacc cccttggccc catggaagaa
     1141 cgcttccttc aggaggtccc ggaagccctt ctcccccatg atgtcccag
//
LOCUS       DATLMA010000315         1924 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_874438, whole genome shotgun sequence.
ACCESSION   DATLMA010000315 DATLMA010000000
VERSION     DATLMA010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874438"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VNA10_04010"
     CDS             <1..708
                     /locus_tag="VNA10_04010"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HVG36874.1"
                     /translation="GLSGGVDSALVAKLCADALGPQRVLAVAMPDGKGGKDLKDAKKF
                     AKALGIDLRIIGIAPIANSLENRLLGFQADQVARGNLRARARMIVLYFIANTEGRVVM
                     GTGNKSELLTGYFTLFGDGAADFLPIGDLYKTQVREMARYLALPPEIVEKVPTAGLWP
                     GQTDEGELGISYDELDRILLGIELQLDPEAIAQKAGVPLDHVMYVGKLVTASVHKRKM
                     PLIPKLGARTIGLDWRE"
     gene            complement(658..1206)
                     /locus_tag="VNA10_04015"
     CDS             complement(658..1206)
                     /locus_tag="VNA10_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36875.1"
                     /translation="MEKRLTFAYGRTLVTSRIFVLASLAVLAAILIALTASPISAVLG
                     LAALLAAYLVLFTLSPLLTQHWITRSRVILRQGWYFRAVLPFSLIEELRAADDAGAFR
                     TPLGISRPFGQPVLFVTGGRTNLVRVRLGRPRRFWQAFGLSASEIVFDVTDRDGFLTA
                     FEERRRLLPPVQTDRSRAELGD"
     gene            1522..>1924
                     /locus_tag="VNA10_04020"
     CDS             1522..>1924
                     /locus_tag="VNA10_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG36876.1"
                     /translation="MEESIFQPYLGTRTIFKMDREILRPSYLPDRLPHRESHIGQLAQ
                     ILVTALKGERPSNVLIFGKTGTGKTAVVKYIENEFRKADGARMVQYLYLNCEIVDTPY
                     GVLQSIGNKFIENFHQRIPFTGLSTDRVYSLL"
BASE COUNT          395 a          584 c          635 g          310 t
ORIGIN      
        1 ggcctcagcg gcggcgtcga ttcggccctc gtggcgaaat tgtgcgcgga tgcgctcggg
       61 ccgcaacgcg tcctggcggt cgcgatgccg gacgggaaag gcgggaagga cctgaaggac
      121 gcgaagaagt tcgcgaaggc actcggcatc gacctccgga tcatcgggat cgcgccgatc
      181 gcgaactctc tggaaaaccg gctgctcggg ttccaagccg accaggtcgc ccgcgggaac
      241 cttcgggctc gcgcccggat gatcgtcctg tacttcatcg cgaacacgga gggccgagtc
      301 gtcatgggca ccggcaacaa gagcgaactg ctgaccgggt acttcacgct ctttggggac
      361 ggcgccgcgg acttccttcc gatcggcgat ctatacaaga cgcaggtacg ggaaatggcc
      421 aggtatctcg ccctcccgcc ggagattgtc gagaaggtgc cgaccgccgg tctgtggcca
      481 ggccaaacgg acgaagggga gctcgggata tcctacgacg agctggaccg gatcctcctc
      541 ggcatcgagt tgcagctgga tccggaggcg atcgcccaaa aggccggcgt gccgctcgac
      601 cacgtgatgt acgtcgggaa gctcgtcacc gcgagcgtcc acaagcggaa gatgccgcta
      661 atccccaagc tcggcgcgcg aacgatcggt ctggactggc gggagtagac ggcgtcgttc
      721 ctcgaaggca gtcaagaatc cgtcccggtc cgtgacatcg aagacgatct cggaggcgga
      781 caggccgaac gcctgccaga accgccgcgg gcgccccagt cggacgcgca ctaggttcgt
      841 gcggcctccc gtgacgaaca gaacgggctg gccgaacgga cggctgatcc ccaagggcgt
      901 gcggaaggcg cccgcgtcgt ccgcggcccg caactcctcg atgagcgaga acgggagcac
      961 ggcacggaag taccagcctt gacgcaagat gacgcgggac cgggtgatcc aatgctgcgt
     1021 gagcagtggg gagagcgtaa agagcacgag gtacgccgcc aggagcgccg ccagaccgag
     1081 gacggccgag attggactgg cggtgagggc gatcaagatg gcggccagga cggcgaggct
     1141 cgcaaggacg aagatgcggc tcgtgacgag tgttcgccca tacgcgaacg tgagtcgttt
     1201 ctccacggtc cccggactcg gttgacctcg gataagggta atgctcatcc gcggcgttgc
     1261 attgctcgtt cgaattccgt caacgcagtc cacgaaatcg tgtgttgctc ggagcgtgaa
     1321 gtttcaaccc ggtctcgaag ggtcctatca taaacggatg agaataaaaa tcgggccatc
     1381 ggcatgcatc gattgtcgca tgggaaactc gcaaaccttt ttgtggggtc cccctgatac
     1441 cggccctctc gcgcgcgatt ttctctggaa aagagacacg cgaggcgaac cttctcgctt
     1501 tcagggggag cgtggggatc catggaagaa agcatcttcc aaccgtacct tggcactcgg
     1561 acgatcttca agatggaccg ggaaatcctg cgtccgtcgt acctgccgga ccgcctgccg
     1621 catcgagaga gccacatcgg acagctcgcg cagatcctcg tgacggccct gaagggcgag
     1681 cgtccgagca acgtcctcat cttcgggaaa acggggaccg gcaagacggc cgtcgtcaag
     1741 tacatcgaga acgagttccg caaggcggac ggcgcgcgga tggtccagta tctgtacctg
     1801 aactgcgaga tcgtcgacac gccgtacggc gtgctccagt cgatcgggaa caagttcatc
     1861 gagaacttcc accagcgcat cccgttcacg ggcctgtcga cggaccgcgt gtacagcctg
     1921 ctcc
//
LOCUS       DATLMA010000316         2242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_212225, whole genome shotgun sequence.
ACCESSION   DATLMA010000316 DATLMA010000000
VERSION     DATLMA010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212225"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1713)
                     /locus_tag="VNA10_04025"
     CDS             complement(<1..1713)
                     /locus_tag="VNA10_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012256094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HVG36877.1"
                     /translation="MASRVRRKGVRRVSAVPFGLGFTKPHNYREVFRSAWNNKRRPIF
                     TWRILRDGVCDGCALGTTGLRDFTMEGIHLCTVRLDLLPLNTMGRLRIRRLVDVKALR
                     SKSSKELRELGRLPYPMIRHRGDPGFRRISWDDALQFAARQIRATSPDRLAFFITSRG
                     MTNESYYMANKVARFLGTNHIDNSSRPCHSPSTTALKETIGVAASTCSYSDWIGSDLI
                     VFFGSDVPNNQPVTMKYLYYAKDQGTKVAVVNPMREPGLERYWVPSVPRSALFGTRFA
                     DEFFTIHTGGDIAFINGVLRHLIENRWVDEDFIEKHTTGFYPVRVEVLSQTWEELERQ
                     AGVSKDRMFDFARMYHEAKTAIFVWSMGITHHRFGVDNVKAIVNLGLVRGIVGREKCG
                     LMPIRGHSGVQGGSEMGAQPAAYGLGFPVDDESADRFAKLWGFRPPTMAGMTAVGMVD
                     AAHERRLDVLYLAGGNFLETLPEPDYVRAALERIPLRIHQDLVLTSQMLVDPAETVLL
                     FPAQTRYEQRGGGTETSTERRIYFSPEIPGRRIRESRAEWEIFMDLAERALPDSAHLT
                     HFEDA"
     gene            1916..2209
                     /locus_tag="VNA10_04030"
     CDS             1916..2209
                     /locus_tag="VNA10_04030"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HVG36878.1"
                     /translation="MGDASGGSVEVYVPYPLRGLTNGIGTVELHAADLAQAIAELNRR
                     FPGLGYRILDDQGRLRRFVNAFVNDEPVSHLSPNDVPLHAGDVVTILPSVAGG"
BASE COUNT          386 a          708 c          727 g          421 t
ORIGIN      
        1 ggcgtcctcg aagtgggtca ggtgcgccga gtcagggagc gctcgctcgg cgaggtccat
       61 gaagatctcc cactccgctc ggctctcccg gatccgacga cctgggatct ccggagagaa
      121 gtagatccga cgttccgtcg acgtctccgt gcccccgccc cgctgctcgt accgggtctg
      181 ggcgggaaac aacaagaccg tctcggccgg atcgacgagc atctgactcg tgaggacgag
      241 atcctggtgg atccgcagcg ggatccgttc gagggcggcg cgcacgtagt ccggctccgg
      301 gagcgtctcg aggaagttgc cacccgcgag gtagaggacg tcgagacggc gttcgtgggc
      361 cgcgtcgacc atcccgaccg ccgtcatgcc ggccatcgtc gggggccgga agccccacaa
      421 cttcgcgaag cgatccgcgc tctcgtcgtc caccgggaag ccgaggccgt acgccgcggg
      481 ctgcgctccc atctcggatc ccccctggac accgctgtgg ccccggatcg gcatcaggcc
      541 gcacttctcc cggccgacga tcccgcgcac gagcccgagg ttcacgatcg ccttgacgtt
      601 gtccacgccg aaccggtggt gggtgatgcc catgctccag acgaagatcg cggtcttggc
      661 ctcgtggtac atccgagcga agtcgaacat ccgatccttc gagacgcccg cctgccgttc
      721 gagctcctcc caggtttgcg acaagacttc cacgcggacc ggatagaagc ccgtcgtgtg
      781 cttctcgatg aagtcctcgt cgacccagcg gttttcgatc agatgcctca gcacgccgtt
      841 gatgaatgcg atgtcgccgc ccgtgtggat cgtgaagaac tcgtccgcga agcgcgtgcc
      901 gaacagcgcg cttcggggta cggagggcac ccagtagcgt tcgagccccg gttcccgcat
      961 cggatttacg accgcgacct tcgtgccctg gtccttcgcg taatagaggt atttcatcgt
     1021 caccggctgg ttgttcggga cgtcggatcc gaagaagacg atcaggtcgc tcccgatcca
     1081 gtccgagtac gagcaggtgg atgccgcgac gccgatcgtc tccttgagag cggtcgtgct
     1141 cggcgaatga cacggccggc tcgagttgtc gatgtggttc gtgccgagga accgcgccac
     1201 tttgttggcc atgtaatacg attcgttcgt catcccgcgg gacgtgatga agaacgcgag
     1261 ccggtccggg ctcgtcgccc ggatctgtcg cgccgcaaat tggagcgcgt cgtcccacga
     1321 gatccgtcgg aaccctgggt cccctcgatg gcggatcatc gggtacggga gccggccgag
     1381 ttcccgaagc tccttcgagg acttcgaccg caacgctttc acgtccacga gacgccggat
     1441 gcggaggcgt cccattgtgt tcagcgggag gagatcgagt cggacggtgc agagatggat
     1501 tccttccatc gtgaagtcgc ggaggcccgt ggtcccgagg gcacaaccgt cgcagacgcc
     1561 atcgcggaga atgcgccacg tgaagatcgg ccggcgcttg ttgttccagg cggaacggaa
     1621 gacttcgcgg tagttatggg gcttcgtgaa gccgagtccg aatgggaccg cgctcacgcg
     1681 ccggacgcct ttccgccgca cgcgggaggc cacgtcccga ggatacgtcg acggcttatc
     1741 tttttgtctc cgtcttgcgg gaatctcgcg agcggtcgat cccacccgga ccttcgtcgc
     1801 ggaatccgcc ctttggatcg caatgaaaaa gggttctccc gtctccagtg aaccgttaaa
     1861 tagcctgctc atgctccgcg cacacggaag tcgagacgtg caggagaccc gtggaatggg
     1921 cgatgcgtca ggaggctcgg tcgaggtgta tgtgccgtat cctctccggg gactcacgaa
     1981 cggaatcggg acggtcgaac tccacgcggc cgacttggca caggcgatcg ccgagttgaa
     2041 tcgtcgattc cccgggctcg ggtatcggat cctggacgat cagggtcggc tccggcgatt
     2101 cgtgaatgcg ttcgtcaatg atgagcccgt gtcgcatctc agtcccaatg acgtcccgct
     2161 gcacgccggc gatgtcgtga cgatccttcc ctcggtagct ggtggttgaa tggcggcaat
     2221 caagaaaggc gatacattgg tg
//
LOCUS       DATLMA010000317         1096 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_512626, whole genome shotgun sequence.
ACCESSION   DATLMA010000317 DATLMA010000000
VERSION     DATLMA010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512626"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..>1096
                     /locus_tag="VNA10_04035"
     CDS             258..>1096
                     /locus_tag="VNA10_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014733634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1246 domain-containing protein"
                     /protein_id="HVG36879.1"
                     /translation="MVSREGILKVLEAYDSSAIRIATIGSHSALDVCDGAVEEGFATL
                     VICEKGRSTPYARFFRATRDKEGRAVRGMVDEAIVLSKFQEVLDEKMQERLRKANAVF
                     IPNRSFTSYCDLDAIERSFHVPLFGSRNLLRTEEREEERSYYWILEKARLPAPEKIKD
                     PKDIDGLVIVKLHHKVKKLERGFFTAASYKEYKAKSEALLKQGVISARDLAKARIERY
                     IIGPIFNFDFFYSPIEAQAEKLELLGVDWRFETSLDGHVRLPADQQMTLDEAQRIPEY
                     VVVG"
BASE COUNT          222 a          337 c          357 g          180 t
ORIGIN      
        1 cgaacgacgc cacgggatgc cccgcggaga ggtcgacctc caggcgatgg ccgagatacg
       61 ccgccagggc ggggcggctc tcgagccgga ggaccttgtc ttcccagccc catccccacc
      121 acttcgtcgg ccgcgcgtcc aacgcttgcg cgaagcggat gggccgataa agacgttcct
      181 ctggaattgc gcgcgacgcg gtcccaaagc attaaagacg gcgccacgat ggggccgcac
      241 cgggagggga cggcacgatc gtgagccggg aagggatcct gaaagtcctg gaagcgtatg
      301 attcgtccgc gatccgcatc gcgacgatcg gctcgcactc ggccctcgat gtctgcgacg
      361 gagcggtcga ggaagggttc gcgaccctcg tgatctgcga aaagggccgg tcgacgccat
      421 atgcgagatt cttccgcgcg acccgggaca aggaaggccg tgcggtccgc gggatggtgg
      481 acgaggcgat cgtcctctcg aagttccagg aagtcctcga cgagaagatg caggagcgcc
      541 ttcgcaaggc gaacgcggtc ttcatcccga atcgctcctt cacctcgtac tgcgatctcg
      601 acgcgatcga gcgctcgttc cacgtcccct tgttcgggag ccgcaacctg ctgcggacgg
      661 aggagcgaga ggaggagcgg agctattact ggatcctcga gaaggcccgc ttgccggccc
      721 cggagaagat caaggatccg aaggacatcg acggcctggt catcgtgaag ttgcatcaca
      781 aggtcaagaa actggagcgc ggcttcttta cggccgcgag ctataaggag tacaaggcga
      841 agtccgaggc cctactgaag caaggagtca tctcggcccg ggacttggcc aaggcccgca
      901 tcgaacggta catcatcgga ccgatcttca acttcgattt cttctattcc ccgattgagg
      961 cccaagcgga gaaactggag ctcctcgggg tcgactggcg gttcgagacg tccttggacg
     1021 gacacgtgcg cctgccggcc gatcaacaga tgacgctcga cgaggcccag cgcattcccg
     1081 aatacgtcgt cgtcgg
//
LOCUS       DATLMA010000318         3691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_31405, whole genome shotgun sequence.
ACCESSION   DATLMA010000318 DATLMA010000000
VERSION     DATLMA010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31405"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VNA10_04040"
     CDS             complement(<1..443)
                     /locus_tag="VNA10_04040"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAD55 family ATPase"
                     /protein_id="HVG36880.1"
                     /translation="MTPSLYNEDLVVRPTMDIEVPLLQTYVEGLDRALGGGIPRGSTV
                     LVAGTPGTMKTSLILWLMHENARLNGVKSLYVSLEQDMDSLKAGAARMGMRNLHESSV
                     YILDMGQLRRGLQRSESSKDWFTILFEIIKEAVNSSGYGVLALDSL"
     gene            545..1336
                     /locus_tag="VNA10_04045"
     CDS             545..1336
                     /locus_tag="VNA10_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36881.1"
                     /translation="MAKRDEAALKLLRWELEGHGKVVMEAMLRHPDKTLAEAVDLIEQ
                     EVPSLSASDPSASDPPGEMPAPVAPSRHRSPPELDALSQEFQTFRHLLHPKEAKEVEA
                     TLKELVRSQDREAMTALRRRLRALSLQAAFWSELAAGHKESNAIALVILRKGREVLAK
                     AGETAYVDQPEVSEMIRRESERRAKGTYVLHLPVGRLVVMTGEGATIAALFRRAPGKD
                     VVQVLVKTVEAIEENKTAATKTFGNDKLAAKYAEALLKLLQKTSL"
     gene            complement(1328..2029)
                     /locus_tag="VNA10_04050"
     CDS             complement(1328..2029)
                     /locus_tag="VNA10_04050"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG36882.1"
                     /translation="MDRMKTYVEGFDEALGGGIPRGSLVLVAGTPGTMKTALTFSILY
                     ENVKAGSKALYITLEESQEDLRAAMTDLGMTGLDDMELYILDIGRIRLEHKDEELSKN
                     WLDVLQKYIDQRVRVNAFDLVAIDSLAALYSLSRLNNPRRELFHFFGFLRSLHATCFL
                     ISEVPSEDQGKLSSFEEEFLADGILYLGHFAKGATDMQLRLRCVKMRRARHALGSYAL
                     SQDDGQFQIARPTSE"
     gene            2180..2407
                     /locus_tag="VNA10_04055"
     CDS             2180..2407
                     /locus_tag="VNA10_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36883.1"
                     /translation="MHIGCGLRVHRIDGNEYLYFWHYEREGGRSRRREDYIGPARDPA
                     SRQQGGKRLLTYYRRIQADMASRIARLEGSA"
     gene            2534..3094
                     /locus_tag="VNA10_04060"
     CDS             2534..3094
                     /locus_tag="VNA10_04060"
                     /EC_number="2.7.7.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol
                     synthase"
                     /protein_id="HVG36884.1"
                     /translation="MALEAIPQALCFFLPAFVANPMAVVFGGGTQMDFGRTLRDGERL
                     FGDGKTWRGLVGGTVSGALLGFLLSVPFNLVASNSPWSFGSYGVAFVASAVLAFGALL
                     GDLVGAFLKRRMHKARGAKAPVLDQYDFVVGALLLSLTIPWWSVPRFFSGDALLGLLA
                     IILITPALHRAVNVIGYRIGQKREPW"
     gene            3051..3617
                     /gene="pyrE"
                     /locus_tag="VNA10_04065"
     CDS             3051..3617
                     /gene="pyrE"
                     /locus_tag="VNA10_04065"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011032096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HVG36885.1"
                     /translation="MSSDTGSARSASPGKVDRSGLVAALKSCGAIQFGTFTLASGKTS
                     SYYVDIKKAITRPDLLRTIAKAMVPFARGASRIAGVELGAVPIAAAVSLATDTPYIIV
                     RKAAKEHGTKHDFEGELNRGDRVLFVEDVVTTGGTLRAAIDRLREHGAVIEDCVCVVD
                     REEGGAILLAEVGVRLHALLRASELVGR"
BASE COUNT          622 a         1177 c         1239 g          653 t
ORIGIN      
        1 aggctgtcca gcgcgaggac gccgtatccg ctcgagttca cggcctcctt gatgatctcg
       61 aagaggatcg tgaaccagtc tttcgacgac tccgaccgct ggagaccgcg gcggagctgg
      121 cccatgtcga ggatgtagac gctcgactcg tggaggttcc tcatccccat ccgcgcggcc
      181 ccggccttca ggctgtccat gtcctgctcc aggctcacgt acagcgactt gacgccgttc
      241 aggcgcgcgt tctcgtgcat cagccagagg atgagggagg tcttcatcgt ccccggcgtg
      301 ccggcgacga ggaccgtgct gcccctcggg atcccgccgc cgagggcgcg gtcgagtcct
      361 tcgacatacg tctggagcag ggggacctcg atgtccatcg taggccgcac gacgaggtcc
      421 tcgttataaa gcgatggcgt caccgttatc gagggagata ttcaatgatg acacttattc
      481 gccgaatccc gatttcggaa ggaatgcttt tgtagccgcg gtccgttgcg ccgggcgaga
      541 agggatggcc aagcgggatg aggcagccct gaagctgctc cgctgggagc tcgagggcca
      601 tggcaaggtc gtcatggaag cgatgctgcg ccaccccgac aagaccttgg ccgaggccgt
      661 cgacctgatc gaacaagagg ttccgtcctt gtccgcgagc gacccgtccg caagtgaccc
      721 gcccggcgag atgcccgcgc ccgtggcccc gtcgaggcac cggtccccgc cggagctgga
      781 cgcgttgagc caggagttcc agacgttccg tcatctgcta catccgaaag aagcgaaaga
      841 ggtcgaggcg accctcaagg agctcgtgcg aagccaggac cgggaggcaa tgaccgccct
      901 ccggcgacgg ctgcgggcgc tctccctcca ggccgcgttc tggtccgagc tcgccgccgg
      961 ccacaaggag tcgaacgcga tcgccctcgt catcctgagg aaaggccgcg aggtcctcgc
     1021 gaaggccggc gagaccgcct atgtggacca gcccgaggtc tcggagatga tccgacggga
     1081 atccgagcgg cgggcgaaag gcacgtacgt gctgcatctc cctgtcggcc ggctcgtcgt
     1141 gatgacgggc gaaggcgcga cgatcgcggc gctgttccgg cgggcgcccg ggaaggacgt
     1201 cgtgcaggtc ctcgtgaaga ccgtcgaggc gatcgaggag aacaagaccg cggccacgaa
     1261 gacgttcggg aacgacaagc tcgcggcgaa gtacgccgag gcgctcctca agctgctcca
     1321 gaagacctca ctctgaggtc ggccgggcga tctggaactg gccgtcgtcc tgactcagcg
     1381 cgtacgatcc gagcgcgtgc cgcgcgcggc gcatcttcac gcaacgcagc cgcaactgca
     1441 tgtccgtcgc gcctttcgcg aagtggccga ggtacaggat gccgtccgcg aggaactcct
     1501 cttcgaacga cgacagcttc ccctggtcct cggacgggac ctcggagatc aggaagcacg
     1561 tcgcgtgcag ggacctcagg aacccgaaga agtggaagag ctcgcggcgc gggttgttca
     1621 ggcggctcag gctgtacagg gccgcgaggc tgtcgatcgc gacgaggtcg aacgcgttca
     1681 cccgcacccg ctggtcgatg tacttctgga ggacgtcgag ccagttcttc gagagctctt
     1741 cgtccttgtg ctccaaccgg atcctgccga tgtccaggat gtacagctcc atgtcgtcca
     1801 ggccggtcat cccgaggtcc gtcatcgcgg cccgcaggtc ctcttggctt tcttccagcg
     1861 tgatgtaaag ggccttggat ccggccttca cgttctcgta caggatcgag aacgtcagcg
     1921 cggtcttcat cgtgcccggc gtgccggcga cgaggacgag ggaaccgcgg gggatgccgc
     1981 cgccgagcgc ttcgtcgaag ccctcgacgt aggtcttcat gcggtccatg ggaggacgtc
     2041 gaacgagccg gatggcgcta taaaggggtg gtggggagat tatcatccct gaaaggagcg
     2101 ggctgctcgg gattcgcaca ccccaccgga aggttcatcg catccggcaa atctacctct
     2161 aaacagaggt aggaacctca tgcacatcgg ctgcggtctc cgcgtccatc ggatcgacgg
     2221 gaacgagtac ctgtacttct ggcactacga gcgggaaggc ggtcgcagcc gccggcggga
     2281 ggactacatc ggaccggccc gggaccccgc ttcgaggcag cagggcggga agaggctcct
     2341 cacgtactat cgccggatcc aagccgatat ggcgtcgcga attgcccgac tcgaaggctc
     2401 ggcgtaggcc atccgaaccg ttccattcga tgccgggatt cctacctctg ttcagaggta
     2461 ggatatcggg aagggctccg gatcggtggg gtgggattat ctatatccgg gtcacgaacc
     2521 tacgccggcc gcgatggccc tcgaggcgat tccgcaggcc ttgtgtttct tcctccccgc
     2581 cttcgtcgcc aacccgatgg ccgtcgtgtt cggaggtggc acgcagatgg acttcggtcg
     2641 aaccctccgc gacggcgagc ggctcttcgg cgatgggaag acctggcggg gcctggtggg
     2701 tgggaccgtg tccggagcgc tcctgggatt cctcctgtcc gtgccgttca atctcgtcgc
     2761 gtcgaattca ccgtggtcgt tcggatcgta cggcgtcgca ttcgtggcct ccgccgtgct
     2821 cgccttcggc gcgctcctcg gggacctggt cggggcgttc ctcaagcggc ggatgcacaa
     2881 ggcccgcggg gccaaggctc cggtcctcga ccaatacgat ttcgtcgtcg gcgcgctcct
     2941 cctgagcctg acgattccat ggtggtccgt cccgcggttc ttctccggtg acgcgctcct
     3001 cggactcctc gccatcatcc ttatcacgcc cgccctgcat cgggcggtga atgtcatcgg
     3061 ataccggatc ggccagaagc gcgagccctg gtaaagtcga ccggtccggc ctcgtcgccg
     3121 cgctgaagtc gtgcggtgcc atccagttcg ggacgttcac gctggcgtct ggcaagacct
     3181 cgtcgtatta cgtggatatc aagaaggcca tcactcgtcc ggacctgctc cggacgattg
     3241 cgaaggcgat ggttccgttc gcccgcggcg cgagccggat tgcgggcgtc gagctcggcg
     3301 ccgtcccgat cgccgcggcc gtgagcctcg cgaccgacac gccgtacatc atcgtccgga
     3361 aggccgcgaa ggagcatggc acgaagcacg acttcgaagg cgagttgaac cgaggtgatc
     3421 gcgtcttgtt cgtcgaggat gtcgtgacga ccggcggcac cctgcgtgcc gcgatcgatc
     3481 ggctacggga gcacggcgcg gtcatcgagg actgcgtgtg cgtcgtggac cgagaagagg
     3541 gcggcgcgat cctcctcgcc gaggtcggcg tgcgccttca tgcgctgctt cgggcgagcg
     3601 aactggtcgg tcggtgaggg cgggttccgc accggtccca atggcatccg aggccgtccg
     3661 caggcgcgag tggccgtgga aacactttcg g
//
LOCUS       DATLMA010000319         2817 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_151164, whole genome shotgun sequence.
ACCESSION   DATLMA010000319 DATLMA010000000
VERSION     DATLMA010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151164"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="VNA10_04070"
     CDS             complement(<1..535)
                     /locus_tag="VNA10_04070"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HVG36886.1"
                     /translation="MALRTALFEWHRTAGARMIEFGGWEMPLQYSGIVDEHRAVRRAV
                     GLFDVSHMGKIFVEGPTAHTFLDRLSANDVPTSAGKARYTHLLREDGTILDDVIVTCL
                     AADRFLLVCNAGPRPAVWSWLTSHASETVALTDRTSERLCLALQGPRAPDLLQRFTSV
                     DLSRVKPFAGVTIDFVPP"
     gene            614..991
                     /locus_tag="VNA10_04075"
     CDS             614..991
                     /locus_tag="VNA10_04075"
                     /inference="COORDINATES: protein motif:HMM:NF022873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3198 domain-containing protein"
                     /protein_id="HVG36887.1"
                     /translation="MGLFRELRYELSSLIFGLGILGMFFSLTQYIIPSQSPDWLQSVH
                     RAVGNYVVWEAFLGFLAVLGGGFYFVDTLRKEREFERLISTPSKEVFVKNMGRIEELT
                     YDHLPSAYERRFLDKKREFRIKS"
     gene            complement(992..2239)
                     /gene="hflX"
                     /locus_tag="VNA10_04080"
     CDS             complement(992..2239)
                     /gene="hflX"
                     /locus_tag="VNA10_04080"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HVG36888.1"
                     /translation="MDVLLVSLTADVGEISALLASAGHRIIETIVQRRDHPDNRTFVG
                     RGKLEEIQARVEAGGIAAVVFNGELRPTMHYQLERDLGVECYDRLRVLLELFAQRASS
                     REGKLQVELALLQYEVPLLREWIHEGDVGERPGFMAGGELRVEAYYETVKRRIKKIRD
                     ELEAIRRERAVRRSVRKERGYHLVALAGYANAGKSSLLNVLADERVVVDDRMFSTLAT
                     TTRSLTGTRKRILLTDTIGFVDGVPFWMAEAFNATLEEILQADLVLLLVDVSDSELEI
                     QRKVRLAARTLFPKVSADSVRPVLTKADLLPDDEIEAKVRVLAESEFHRTPIVISTRT
                     GRGFDELRDAIFRAFAYPIEVHLILPQDPEAGGKLHWLYERTEVVSAVHRPDRIEVVV
                     RCRPRDRESVERLGRVLLARTIE"
     gene            2367..2603
                     /locus_tag="VNA10_04085"
     CDS             2367..2603
                     /locus_tag="VNA10_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36889.1"
                     /translation="MQIGCGVTTKAIRGRPYLYFWHYEERGGRRVQAFRYLGAARSEA
                     ARAKLTEALDAYLERVTAEIRRKRAEVLARAMPE"
BASE COUNT          498 a          916 c          937 g          466 t
ORIGIN      
        1 ccggtggaac gaagtcgatt gtcacgccgg caaagggctt aacgcgactc aggtccaccg
       61 acgtgaaacg ttgaaggaga tccggggcgc gaggaccctg gagggccagg cagagccgtt
      121 ccgatgtgcg atccgtgagg gcgaccgttt cactcgcgtg agacgtgagc catgaccaga
      181 ccgcgggacg aggccccgcg ttgcacacga gcaagaaccg gtcggccgcg aggcacgtca
      241 cgatgacgtc gtcgaggatc gtgccgtctt cgcgcagcag atgcgtgtac cgcgctttgc
      301 ccgcggacgt gggcacgtcg ttcgcgctga ggcgatcgag gaacgtatgc gccgtcggcc
      361 cctcgacgaa gatcttgccc atgtggctca cgtcgaacag gccgaccgca cggcgcacgg
      421 cgcgatgctc gtcgacgatc ccggaatatt ggaggggcat ctcccatccg ccgaactcga
      481 tcatgcgcgc gcccgccgtc cgatgccatt cgaagagcgc cgtgcgcaac gccacgaagg
      541 cgcatcgcgc gcgtcgatga aagccttcgc tgcgagcaaa gcttatggcc gccgccctca
      601 tagcgcggcc accatgggcc tgttccggga actccgctat gagctgagct ccctcatctt
      661 cggcctgggg atcctcggga tgttcttttc gttgacgcaa tacatcatcc cgagtcagag
      721 cccggactgg ctccagtcgg tccaccgggc ggtcggcaac tacgtggtct gggaggcgtt
      781 cttgggcttc ctcgcggtcc tcggcggcgg cttctacttc gtcgacacgc tccgaaaaga
      841 gcgcgagttc gaacggctca tctcgacgcc atcgaaagag gtcttcgtga aaaacatggg
      901 tcggatcgag gagctcacgt acgaccacct gccgtccgcc tacgagcggc ggttcctcga
      961 caagaaacgg gagttccgaa tcaagagctg atcactcgat cgtccgcgcc aggaggacgc
     1021 gtccaaggcg ctcgacggac tcgcgatcgc gcggccgaca gcgcacgacg acctcgatgc
     1081 ggtcgggccg atgaacggcg gacacgacct ccgtgcgctc gtacaaccag tggagcttgc
     1141 cgcccgcctc gggatcttgc ggcaggatga ggtggacctc gatcgggtac gcgaacgcgc
     1201 ggaagatggc gtccctcaac tcgtcgaacc cgcgtccggt ccgcgtcgag atgacgatcg
     1261 gcgtccgatg gaactccgac tcggcgagga cgcggacctt cgcttcgatc tcgtcgtccg
     1321 ggaggaggtc ggctttcgtc aggaccggtc gaaccgaatc ggcggagact ttcgggaaga
     1381 gggtgcgtgc cgccaaacgc actttccgtt ggatctccag ctcggaatcg gagacgtcca
     1441 cgaggagcag gacgagatcc gcctggagga tttcctcgag cgtcgcgttg aaggcctcgg
     1501 ccatccagaa cggcacgcca tcgacgaagc cgatcgtgtc cgtgagcagg atccgcttgc
     1561 gcgtccccgt gaggctccgc gtcgtcgtcg ccaaggtcga gaacatccgg tcatccacga
     1621 ccacgcgttc gtccgcgagg acgttcagga gggacgactt gcccgcgttg gcgtatcccg
     1681 ccagggcgac gagatgatag ccccgttcct tgcggacgga tcgccgcacg gcccgctccc
     1741 gacggatcgc ctcgagttcg tcccggattt tcttgatccg tcgtttcacc gtctcgtagt
     1801 acgcctcgac gcgcagctcg ccgcccgcca tgaacccggg acgctccccg acgtcgccct
     1861 cgtggatcca ctcgcggagc aggggcacct cgtactgaag gagggcgagt tcgacctgga
     1921 gtttcccttc ccgactcgat gcgcgttggg cgaagagctc cagcaggacg cgcaagcggt
     1981 cgtagcattc gacgccgagg tcccgctcga gctggtaatg catcgtgggc cggagctcgc
     2041 cgttgaagac gaccgcggcg attccgccgg cctcgacgcg ggcctgaatc tcctcgagct
     2101 tcccgcggcc cacgaacgtg cggttgtccg gatggtcgcg acgctggacg atcgtctcga
     2161 tgatccgatg gcccgcggac gccaggaggg ccgagatctc tcccacgtcg gccgtgaggg
     2221 aaaccaggag gacgtccaac gggcatccga aggggtccga ccgccatgaa cgtttccagt
     2281 ggaaaccaag gggtggggcc accggcatct catttccgga ttgcggcccg attaacctta
     2341 agtaaggtta acgcgatgcc ggggccgtgc agatcggttg tggcgtgacc acgaaggcca
     2401 ttcgcgggcg gccgtacctc tacttctggc attacgagga acggggcggt cgccgggtcc
     2461 aggccttccg atacctggga gccgcgcggt ccgaggcggc ccgggcgaag ctgacggagg
     2521 ccctggacgc atacctcgag cgcgtcaccg cggagatccg tcggaagcgc gcggaagtcc
     2581 tggcccgcgc gatgccggag tgacgcgaag cccttatcgc cggccgaggc catcggaatc
     2641 ccgcgatgca gattcaggtg cggctcttcg cgacgtaccg agagatcgtg ggcgaggggc
     2701 aactcgcctg gacgctgcgg gatggcacga ccgttgcgca gctcgtcgag gccgtcctcg
     2761 cgaaataccc gcggctcctc ggccacggga acagcatgct cctcgcggtg aaccacg
//
LOCUS       DATLMA010000320         1115 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_31825, whole genome shotgun sequence.
ACCESSION   DATLMA010000320 DATLMA010000000
VERSION     DATLMA010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31825"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /gene="thiD"
                     /locus_tag="VNA10_04090"
     CDS             complement(<1..495)
                     /gene="thiD"
                     /locus_tag="VNA10_04090"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015492140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HVG36890.1"
                     /translation="MRTALTIAGSDSGGGAGIQADLKSFASVGVHGTSVITCVTAQNT
                     RSVDSIFPIPVAEVRKQLRAVLGDFDVRAAKTGMLYSAEIVRVVARELRGTTFPLVVD
                     PVMMATVGARLEQDDFADALVDRLLGRATLITPNRFEAERLSGIRIPDVESMERAARA
                     IHGLG"
     gene            602..895
                     /locus_tag="VNA10_04095"
     CDS             602..895
                     /locus_tag="VNA10_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36891.1"
                     /translation="MRARSGHIKFDKKVKWKNLASAFRPLFLKFLEETQQLPEDMESV
                     DVLIEENLRDLRNNRKPEGYNREGLMRMIFPISNQVEFYLYGRGKTIEVARVT"
BASE COUNT          232 a          355 c          362 g          166 t
ORIGIN      
        1 tccgagtccg tggatggccc gcgccgcgcg ctccatcgat tcgacgtccg ggatccggat
       61 ccccgacaag cgctcggcct cgaagcgatt cggggtgatg agggtggcgc gaccgaggag
      121 gcggtccacg agggcgtccg cgaagtcgtc ttgctcgagg cgcgccccga ccgtcgccat
      181 catgaccggg tccacgacga gggggaacgt cgtgccgcgg agctcgcgcg cgacgacccg
      241 cacgatctcg gcagagtaga gcatgcccgt cttcgccgcc cgcacgtcga agtccccgag
      301 gaccgcgcgg agctgttttc ggacttcggc cacggggatc gggaagattg agtcgacgga
      361 gcgcgtgttc tgggccgtca cgcacgtgat gaccgatgtt ccgtggaccc cgaccgaggc
      421 gaacgatttc aggtccgcct ggatcccggc accgcccccg gagtcgctcc cagcgatcgt
      481 cagggcggtc cgcacgctcg caccatcgag ggggtcggct taagcctgac gcgggcgacg
      541 tcgccggacg cgcccgggcg ggacacggtt aaatagcgcg tggctcttcg gaacgaaaac
      601 catgcgcgcg cggagcggtc acatcaagtt cgacaagaag gtgaagtgga agaacctcgc
      661 gtccgcgttc cggcccctgt tcctgaagtt cctcgaggag acgcagcagc tccccgaaga
      721 catggaaagc gtcgacgtgc tgatcgaaga gaacctgcgg gacctgcgaa acaaccggaa
      781 acccgaaggg tacaaccggg aaggcctcat gcggatgatc ttcccgatct cgaaccaggt
      841 cgagttctat ctgtacggcc gcgggaagac gatcgaggtc gcccgcgtga cctagcagct
      901 gagccggatc ctccagaaat atcgtctcaa gcacacgatc gagtgggacc gcctcaagat
      961 cttcgcagac aagaaagagg cctagacgcc atcgggccgc aaaatcgccc ggaagggact
     1021 gcatacctct acttagaggt ataaacggaa actcgagccg accacgcgca gatggactac
     1081 tcattccccg aacacgaacg tcgagacgac cgagt
//
LOCUS       DATLMA010000321         1032 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_396904, whole genome shotgun sequence.
ACCESSION   DATLMA010000321 DATLMA010000000
VERSION     DATLMA010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396904"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VNA10_04100"
     CDS             complement(<1..716)
                     /locus_tag="VNA10_04100"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG36892.1"
                     /translation="MRELGYVEGQNVTIEARWMEGTAPEEAAGLSAELVRSKVDVLVA
                     QGHAVLGAKSEAGSVPIVFIFSGDPVGAKIVPNLARPGGNLTGITLQAVDLAGKRIEL
                     LKEAAPRVSRLAAFVNPLHPGEDDEFRESQTAAHRLGLTLRDFPVRTVAEVNAALQAM
                     ARDRVDGVVAFSNALIMSQRNVIAEFAIMYRIPTISGWEDFAVDGNLMTYGPNLQDSG
                     RRVATYVDKVLKGAKPADLPV"
BASE COUNT          198 a          334 c          300 g          200 t
ORIGIN      
        1 acggggagat cggcgggctt cgcgcccttc agaaccttgt cgacgtacgt ggcgacgcgc
       61 cgcccggagt cctgaaggtt cggaccgtag gtcatgagat tgccgtcgac tgcgaagtct
      121 tcccatcccg aaatcgtggg aatccggtac atgatcgcga actcggcgat cacgttccgc
      181 tgactcatga tcagcgcgtt cgaaaacgca acgaccccgt cgacgcggtc acgcgccatc
      241 gcctgaaggg cggcgttcac ctcggcgacg gtgcgcacgg gaaagtcccg aagcgtcagc
      301 cccaagcggt gcgccgcggt ctgcgattct cgaaattcat cgtcctcccc tgggtggagt
      361 ggattcacga aagcagcgag gcgtgagacg cgcggggccg cttctttgag caactcgatt
      421 cgctttccgg ctaggtcgac ggcttggaga gtgattccag tgaggttgcc tccgggccgc
      481 gcgaggttcg gtacgatctt cgccccgaca gggtcaccac tgaatatgaa cacaatcggc
      541 actgatcccg cctcgctctt cgcaccgagg accgcgtggc cttgcgccac gaggacgtcg
      601 accttcgatc gaacgagttc ggcgcttaac ccggccgcct cctcgggcgc cgttccttcc
      661 atccagcggg cctcgatcgt gacgttttgc ccctcgacgt aaccaagctc gcgcatccct
      721 tgacgaaaag cctcgaagac gccgtttgcc gcagagacgg agtaccagcc gccgacccag
      781 ccaactcgcg cagcttttcg cccctgcaaa cgcgtcgagg cgggcgcagc gatgagcccg
      841 acaccgatac ttacaacgaa tgtcctccgg tccatggctc aattacctcg tctcttgcgt
      901 gtgcggccta acagttattc accaggccga ccggtcagta ctattgaaaa tcgcagagca
      961 tgcgagcgca caataactcc ttgattcatc gcgaatgctc tcggggagtc tgtccgcata
     1021 tgtgatgata gt
//
LOCUS       DATLMA010000322         3279 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_32124, whole genome shotgun sequence.
ACCESSION   DATLMA010000322 DATLMA010000000
VERSION     DATLMA010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32124"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VNA10_04105"
     CDS             complement(<1..181)
                     /locus_tag="VNA10_04105"
                     /inference="COORDINATES: protein motif:HMM:NF014058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archease"
                     /protein_id="HVG36893.1"
                     /translation="MRYEEIEHTADVGIRAYGATLNELFANAAEGMFSLVADLGAVKP
                     VGEIEVRLAAEDIPTL"
     gene            complement(260..1012)
                     /locus_tag="VNA10_04110"
     CDS             complement(260..1012)
                     /locus_tag="VNA10_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011237337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HVG36894.1"
                     /translation="MEAQATVASRKGKEFLLSECYVSVQGESSLVGLPTIFVRLYTCN
                     LRCRWCDSMHAVEGGDFTRIGVDATVKKILGLAGDIQSDARGIRNLCWTGGEPLLQGE
                     SIARAIERLPETFVHSIETDGEIDLAAFDALVPDERASGRVRYVMDVKCPGSGMVANK
                     AYANLERLRAHDEVKFVLLDRADYEFAKGVLSKVDTRARTVLFSPATPAHHVSHGLDP
                     GQLASWILDERLPVRLQLQLHKVIWPGRERGI"
     gene            complement(1039..1746)
                     /gene="queC"
                     /locus_tag="VNA10_04115"
     CDS             complement(1039..1746)
                     /gene="queC"
                     /locus_tag="VNA10_04115"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015180290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HVG36895.1"
                     /translation="MVETAVVLVSGGMDSATALATTIKEGNRVIALTFDYGQRHRREL
                     DAAASIAKHFRVADHRIVAIDLSAIGGSALTDERIRVPEQRRIEEIGRGIPITYVPAR
                     NTIFLSYALGLAEATTAKSIVIAANQVDYSGYPDCRPEFYEAFQEVARLGTRRGVEGD
                     VIEIRTPLIRMSKADIVRKGEELGVPWELTWSCYLGGIKACGVCDSCQLRLKGFREAG
                     VKDPLPYASRPKRAAKS"
     gene            complement(1794..>3279)
                     /locus_tag="VNA10_04120"
     CDS             complement(1794..>3279)
                     /locus_tag="VNA10_04120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36896.1"
                     /translation="WSPGSTVTVVGTITSTERQNTSYGPEVYLGLDGGPGCAGVPSVA
                     GDPTAKYEIGARFQTTLHFQRYMINGDPAVSAPELQCPFPSGLRAIGTVLDAGSLYAG
                     RLFLVYNGTESNGTVHYEIVTANGAAYAPDTLPATLRKSTPLQGSDPILPAGAPIDSF
                     ARWIDFSGLQYLGALGAYSEFPIVDEMSSLAAGISRNGSLRFVDANRNGLVDDGDRLD
                     VNLAATGSPTAWDTFQLIIGGLFVAPETYVACTRFIVNGPMGPFDIPLPERRDSHVKL
                     RYAGDTIGTTFTSKIDVRSGFGPAPALSDVRFFLQAGGSSGNGTLSALPITLSNGVSL
                     ALTDANGNGRLDSGDMFRAAGLGNRTSVTLDLARSNASVGTLSWVVGYGEPIGRVPLI
                     TFTTQGTNPWRATANSPFWSPELALNRTVRASLLENGIAVLTNVSLASGVLGTFANGT
                     LAFTDSDGDGSLSSGDVFTVTGASGNRYELDVSVLYGYPWRAYL"
BASE COUNT          568 a         1053 c         1076 g          582 t
ORIGIN      
        1 tgagcgtcgg gatgtcctcc gcggcgaggc ggacctcgat ctccccgacg ggcttcaccg
       61 cgccgagatc ggcgacgagg ctgaacatcc cctcggccgc gttcgcgaag agttcgttca
      121 acgtggcccc gtacgctcgg atcccgacgt ccgcggtgtg ctcgatttct tcgtaccgca
      181 cggccacgcc aagcgcactc gaagatgaaa gtcctccggt gttgcgcgtc ccgtcggagc
      241 cgctcagacc tgtgtgccgt cagattccgc gctctcgtcc gggccagatc accttgtgca
      301 gctggagctg gagccgaacg ggcaggcgct catcgaggat ccacgacgcg agctgtccgg
      361 gatccagccc atgcgagacg tggtgcgccg gcgtggcggg agagaagagg accgtccggg
      421 ccctcgtgtc gaccttggac aagacgccct tcgcgaattc gtaatccgcg cgatcgagga
      481 ggacgaactt cacttcgtca tgggcccgga ggcgctcgag gttcgcgtac gccttgttcg
      541 cgaccatgcc ggaaccgggg cacttcacgt ccatcacgta ccgcacgcgg ccggatgccc
      601 gttcgtccgg cacgagcgcg tcgaaggcgg cgaggtcgat ctcaccatcc gtctcgatcg
      661 aatggacgaa ggtctccgga aggcgttcga tggcgcgggc gatcgactcg ccttggagca
      721 acggttcgcc gccggtccag cacaggttcc ggatccctcg ggcgtccgac tgaatgtcgc
      781 ccgcgaggcc gaggatcttt ttcaccgtcg cgtcgacgcc gatccgggtg aagtccccgc
      841 cctcaaccgc gtgcatcgag tcgcaccagc gacagcgcag gttgcacgtg tacagccgga
      901 caaagatcgt cgggaggccg acgagagagc tctccccctg gaccgacaca tagcattcgc
      961 tcaggaggaa ctccttccct ttgcgcgatg cgacggtggc ctgggcctcc atcgtgcttc
     1021 cgatgagccc gtggcctctt aactcttcgc cgcgcgcttc ggtctcgagg cgtacggcaa
     1081 cggatccttc acgccggcct cgcggaatcc cttgagccgg agttggcacg agtcgcagac
     1141 gccgcacgcc ttgatgccac cgaggtaaca cgaccacgtg agctcccagg gcacgccgag
     1201 ttcctctccc ttgcgaacaa tgtccgcctt cgacatgcga atcagcggag tgcggatttc
     1261 gatgacgtct ccttcgaccc ctcgcctcgt gccgagacga gcgacctcct gaaaggcctc
     1321 gtaaaactcg ggccggcagt ccggatatcc ggagtaatcg acttgattgg cggcgatcac
     1381 gatcgacttc gcggtggtgg cctccgccaa gcccagggcg tagctcaaga agatcgtgtt
     1441 ccgagccggg acataggtga tcgggatgcc tcggccgatt tcctcgatcc gtcgttgctc
     1501 cggtacgcgg atgcgctcgt ccgtgagggc ggacccgccg atcgccgaca ggtcgatggc
     1561 cacgatccgg tggtctgcga cccggaagtg cttcgcgatg ctcgccgccg cgtcgagttc
     1621 ccttcgatgg cgctggccgt agtcgaacgt gagggcgatg acgcgatttc cctctttgat
     1681 cgtcgttgcg agggcggtcg ccgagtccat cccgccggac acgaggacca ccgcggtctc
     1741 gaccatcgtc tcagacatcg gggcggacgc taaaggcctt gcgaacgacg cgttcacagg
     1801 taggctcgcc acgggtatcc gtaaagcacg gagacatcga gctcgtaccg gttgccgctg
     1861 gcgccggtca ccgtgaagac gtcccccgaa gatagacttc cgtcgccatc cgagtcggtg
     1921 aacgcgaggg ttccgttcgc aaatgtgccg agaaccccgc tagcgaggga gacgttcgtc
     1981 aacaccgcga ttccgttctc caggagagac gcacggaccg tccggttcag ggcgagctcg
     2041 ggactccaga acggggagtt cgcggtcgca cgccacgggt tcgtcccctg ggtggtgaac
     2101 gtgatcagcg gaacccgccc gatcggctcg ccgtagccga cgacccagga gagggttccc
     2161 acgctcgcat tgcttcgggc caaatccaag gtcaccgagg tccgattccc caggcccgcg
     2221 gcgcggaaca tgtcaccgga gtcgagccga ccgtttccat tcgcatccgt gagggcgagc
     2281 gagactccgt tgctcagtgt gatcgggagg gcggagaggg tcccgttccc ggacgagcct
     2341 ccggcttgca ggaagaagcg gacgtctgaa agcgcagggg cgggtccgaa tccggagcgc
     2401 acgtcgatct tcgaggtaaa cgtcgtcccg atggtgtccc cggcgtagcg cagtttcaca
     2461 tgggagtcgc gtctctcagg caacgggatg tcgaacggtc ccatcggacc gttcacgatg
     2521 aaacgcgtgc aggccacgta ggtctccgga gctacgaaga ggccgccgat gatgagctga
     2581 aacgtgtccc acgcggtcgg cgagcccgta gcggccaggt tgacatccaa acggtcgccg
     2641 tcgtccacga gtccattgcg gttcgcgtcg acgaaccgaa gggagccgtt ccgggagatg
     2701 ccggccgcca gggaactcat ttcgtcaacg atcggaaact ccgagtatgc cccgagcgca
     2761 cccagatatt gcagtccact gaaatcgatc cagcgcgcga acgaatcgat gggggcgccg
     2821 gcgggaagga tcgggtctga tccttggagt ggtgtggact tgcgcaatgt ggcggggagc
     2881 gtgtccggtg cgtaggccgc tccgttcgcc gtgacgattt cgtagtggac ggtgccattt
     2941 gactcggtgc cgttgtagac gaggaagagc cgtccggcat agaggctccc ggcgtccagg
     3001 accgtgccga tcgcccgcag tcccgacggg aacggacact gaagttccgg agcggatacc
     3061 gccgggtctc cgttgatcat atatcgttgg aaatggaggg ttgtttggaa ccgggcgccg
     3121 atctcgtact tcgcggtcgg gtcgccggcg acgctcggaa cgcccgcgca gccgggcccg
     3181 ccgtcgagtc ccagatacac ctcggggccg tagctcgtgt tctgtcgttc ggtgctcgtg
     3241 atcgtcccca cgacggtgac ggtacttccc ggactccag
//
LOCUS       DATLMA010000323         1016 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_151508, whole genome shotgun sequence.
ACCESSION   DATLMA010000323 DATLMA010000000
VERSION     DATLMA010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151508"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..356
                     /locus_tag="VNA10_04125"
     CDS             156..356
                     /locus_tag="VNA10_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36897.1"
                     /translation="MSAALLALFWGLAFLVMLNDIDFFSVQDLFDTEQLHHEHIVVAL
                     FFCGIVAAAIAVIWARQRRIEY"
     gene            complement(372..>1016)
                     /locus_tag="VNA10_04130"
     CDS             complement(372..>1016)
                     /locus_tag="VNA10_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36898.1"
                     /translation="ISLVNVTLTATSPSGTGIFTMYSVDGSGWTQYAQMFMLTEGRHT
                     LDYQSWDTAGFVEPKASTSVDIDLTAPTLNGSPSGVVTTPDVTITWTGTDGSSGIARY
                     EVSIDGGATESVGMTTSLTRRWSDGDHTIRVTAYDAAGNQDATVIHFTVSPASSGVFG
                     VFQTLPLILPAFALCLLLFAIAFWRRRLRRNEEEDRPEPDPDDLPPEEYESSEW"
BASE COUNT          177 a          316 c          333 g          190 t
ORIGIN      
        1 agtggttacc gcttcccgga acacgcacga cttttgtgtc ggcgtcggcg gtgcatttcc
       61 aggtgcgagg cggaacgaag cgcggcgaga aaggttgaag ggatagtctc gattctgggc
      121 cgcgaggcgg cactacgcga ctgcaagagt actcgttgag cgccgcgctt ctcgcccttt
      181 tctggggact cgcattcctc gtgatgttga acgacatcga ctttttctcc gtgcaggatt
      241 tgttcgacac ggaacagctg caccatgaac acatcgtcgt cgccctcttc ttctgcggca
      301 tcgtcgcggc ggccatcgcg gtgatctggg caaggcaacg ccgaatcgag tactgacggt
      361 cgaggccgcc gctaccactc cgaggactcg tattcctcgg gcggcaggtc gtccggatcc
      421 ggctcgggtc ggtcctcctc ttcgttgcgg cggagacgcc ggcgccagaa ggcgatagcg
      481 aacaagagaa ggcacagcgc gaacgccggc aggatgagcg ggagcgtctg gaacaccccg
      541 aacaccccgg acgacgccgg gctcacggtg aagtggatga ccgtggcatc ctggttgccg
      601 gccgcatcgt aggccgtcac ccggatcgtg tggtccccgt cggaccagcg gcgggtcagg
      661 ctcgtggtca tgccgacgga ctccgtcgcc cctccatcga tcgacacctc gtagcgggcg
      721 atgcccgagg aaccatcggt gccggtccac gtgatcgtca cgtcgggggt tgtcacgaca
      781 ccgctcggag aaccgttaag ggtcggagcc gtcaggtcaa tgtcaaccga cgtcgatgcc
      841 ttcggttcga cgaacccggc ggtgtcccag gattggtagt cgagcgtgtg ccggccctcc
      901 gtaagcatga acatctgcgc gtactgcgtc catccggacc cgtcgacgct gtacatcgtg
      961 aagatcccgg tgccgctcgg actcgtggcc gtcagcgtga cgttcaccag ggagat
//
LOCUS       DATLMA010000324         2211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_32562, whole genome shotgun sequence.
ACCESSION   DATLMA010000324 DATLMA010000000
VERSION     DATLMA010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32562"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..1259
                     /locus_tag="VNA10_04135"
     CDS             75..1259
                     /locus_tag="VNA10_04135"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HVG36899.1"
                     /translation="MVRLRFGCSGWDYQEWIGPVYRNASESKLRAYSRIFDTAEINST
                     FYRAPSPGMVIGWARYTPDEFVFAAKVPQTVTHDRLLDLAKGADKDLRAYCELMRPLL
                     DAGKLGPLLLQLPPRLRFQEAAIHRFLDVLPRDFTFALEPRNKTWMTMEAFDLLHATG
                     VAYTIVDEPLLPPDLHVTSAMAYLRWHGHGTDPWYNYRYSEEEITSWVPRVEQVASQA
                     ETVYGFFNNHFHGYAPENCLQILRMLGVQTQEQARAMQRIEAFRKQTSPAEVRLRSLT
                     LEDFGADVPKDALVEAALGRFIDAGRLDRAKRIDSRDVEISRDGAAILARVKNYRVEL
                     DPGARTVVHDCEDWGKLVDRKDFCKHVGKFFLSLPKGEALTLLEAIAANRNAWTFSMP
                     AR"
     gene            1327..>2211
                     /gene="fen"
                     /locus_tag="VNA10_04140"
     CDS             1327..>2211
                     /gene="fen"
                     /locus_tag="VNA10_04140"
                     /inference="COORDINATES: protein motif:HMM:TIGR03674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease-1"
                     /protein_id="HVG36900.1"
                     /translation="MGVLLTPIVVRHATNLEALRGRSVAIDGNLELYQFLSIMRTRDG
                     RPLEDSKGRITSHLNGMAFRTTRLIADYDIRPVFVFDGPPPELKREEIRKRREAREKS
                     IREYEAAVASGDTATAWSRAVMTSRLTRTMVDEAKTLLALLGIPWVQAPSEGEAQAAF
                     LARRGDVWAAGSKDYDSLLFGAPRLVRFLAVASSEFLPSIGRSRSVPPELLDLEENLR
                     ILGLSREQLIDVGILVGTDFDEGVKGIGPKTAVKRIREWGSLDGSPAEIRALLPDHLD
                     AIREFFSNPPVTVDVDLTV"
BASE COUNT          396 a          699 c          719 g          397 t
ORIGIN      
        1 gaccgcgaaa ctgcgtccat cttgccacgc ccgactatac aataatcaat cgcgggcgca
       61 tctgggtggc accgatggtc cgcctccggt tcgggtgcag cggctgggac taccaggaat
      121 ggatcggccc cgtctatcgg aacgccagtg agtcgaagct ccgcgcctac tcccggatct
      181 tcgacacggc cgagattaac tcgacgttct atcgcgcccc gtcccccggc atggtcatcg
      241 ggtgggctcg ctacacgccg gatgagttcg tctttgccgc caaggtgccg cagaccgtca
      301 cgcacgatcg gctcctcgac cttgcgaagg gcgccgacaa ggatctccgc gcgtactgcg
      361 aactgatgcg gcccctcctc gacgcgggaa agctgggccc gctccttctc cagctcccgc
      421 cgcggctgcg gttccaggag gcggcgatcc accgcttcct ggacgtcttg ccgcgagact
      481 tcacgttcgc gctcgagccg cgcaacaaga cgtggatgac gatggaggcg ttcgacctct
      541 tgcatgcgac cggcgtggcg tacacgattg tcgacgaacc gctacttccg ccggacctgc
      601 acgtgacgtc ggcgatggcg tacctgcggt ggcacggcca cggcacggac ccgtggtaca
      661 actatcgcta cagcgaggag gagatcacct cctgggtgcc ccgcgtggaa caggtcgcct
      721 cccaggcgga gaccgtctac ggtttcttca acaatcactt ccacggatac gcgccggaga
      781 actgtctcca aatcctgcga atgcttgggg tccagacgca agagcaggcg cgcgcgatgc
      841 agcggatcga ggcgttccgg aaacagacga gtcccgcgga ggttcgtctt cgatcgctca
      901 cactcgaaga cttcggggcc gacgtgccga aggacgcgct cgtcgaggcg gcgctcggac
      961 ggttcatcga tgcgggccgg ctcgatcggg cgaagcgaat cgattcgcgg gatgtagaaa
     1021 tctcgaggga tggagccgcg atcttggcgc gcgtcaagaa ttaccgcgtg gagctcgacc
     1081 ccggtgcgcg tacggtcgtg cacgactgcg aagactgggg caagctcgtc gaccgaaagg
     1141 acttctgcaa acatgtcggg aagttcttcc tgagccttcc gaagggggag gcgttgacgc
     1201 tcctcgaggc gattgcggcg aatcgaaatg cctggacgtt ctcgatgcca gcccggtagg
     1261 cggtttctca tcaagctcga ggtcggcgag aagccataac gcgcgatgcg gtaggggaat
     1321 tcggccatgg gcgtcctcct cacaccgatt gtcgttcgcc acgccacgaa cttggaggcg
     1381 ctgcgcggac ggagtgtcgc aatcgacgga aatctcgaac tgtaccagtt cctgtcgatc
     1441 atgcgcacgc gcgatggtcg gccgctcgaa gactcaaagg gtcggatcac atcccacctg
     1501 aacgggatgg ccttccggac gactcgcctc atcgcggatt acgacatccg tcccgtgttc
     1561 gtgttcgacg gtccgccgcc ggagttgaaa cgggaagaaa ttcgcaagcg gcgcgaggcg
     1621 cgcgagaagt cgattcggga atacgaggcc gccgttgctt ccggcgacac cgcgaccgcg
     1681 tggtcgagag ccgtgatgac ctcgcgcctg acccgaacga tggtcgacga ggcgaagacc
     1741 ctgttggcgt tgctcgggat cccatgggtc caggccccca gcgaaggcga agcccaggcc
     1801 gcgttcctcg cgcgtcgcgg cgacgtgtgg gccgcgggct ccaaggatta cgattccctg
     1861 ctctttgggg cgccgcggct cgtccggttc ctcgcggttg cgtcgagcga gttcctcccg
     1921 agtatcggcc gatcgcggtc cgtgccaccg gaattgctcg acctcgagga gaacctccgg
     1981 atcctcggcc tctcccggga acagctcatc gacgtcggga ttctggtcgg gacggacttt
     2041 gatgaaggcg tgaaaggaat cggcccgaag accgcggtca agcgaattcg tgagtggggg
     2101 tctctcgacg gatcgcccgc cgagatccgc gcgctgttgc cggatcacct ggatgcgatc
     2161 cgagaattct tttcgaatcc tcccgtgacc gtggacgtgg acctcacggt g
//
LOCUS       DATLMA010000325         1082 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_821033, whole genome shotgun sequence.
ACCESSION   DATLMA010000325 DATLMA010000000
VERSION     DATLMA010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_821033"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VNA10_04145"
     CDS             complement(<1..477)
                     /locus_tag="VNA10_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HVG36901.1"
                     /translation="MPLEEKKKSRLYALKPLTDRLPAVTRPEGHVHFRTKMFWVLAIL
                     ILYFAMTNIFIYGLDRANVIDFFSSLRAILAGAQGSLMHLGIGPIVTASIIMQLFAGA
                     KIINLDLQDDEDKSVYQGTQKFLVIVMIFVEAVPQVFGFLTPAAGFVTGLNSSFLFG"
     gene            complement(482..919)
                     /locus_tag="VNA10_04150"
     CDS             complement(482..919)
                     /locus_tag="VNA10_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015505276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uL15 family ribosomal protein"
                     /protein_id="HVG36902.1"
                     /translation="MPSRTRKLRGSRTHGRGKKHGRGAGGRGGTGNAGLHKHKFKWMI
                     KYDPEHFGPRGFFRHAQPRPTSAIDLEDLVHRIGEFEAAGHAKKDDSRINVDLTAAGI
                     DKLLGSGRVTMTMRITVAKASPAAVAKVSGAGGEVVLPGDAGK"
BASE COUNT          179 a          351 c          352 g          200 t
ORIGIN      
        1 gccgaacagg aaggagctgt tcagcccggt cacgaacccc gcggccgggg tgaggaagcc
       61 gaagacctgc gggaccgcct cgacaaagat catcacgatg accaggaact tctgggtccc
      121 ctggtacacg ctcttgtcct cgtcgtcctg gaggtccaga ttgatgatct tcgcgcccgc
      181 gaagagctgc atgatgatcg acgccgtgac gatcggtccg atcccgaggt gcatcagcga
      241 gccctgggcg cccgcgagga tcgcccgcaa gcttgagaaa aagtcgatga cattggcccg
      301 gtccaggccg tagatgaaga tgttcgtcat cgcgaaatac aggatcagga tcgcgaggac
      361 ccagaacatc ttcgtgcgaa agtggacgtg gccctccggc cgcgtgaccg cgggcagccg
      421 gtccgtgagc ggtttcagcg cgtacagacg gctcttcttc ttctcttcga ggggcatcgg
      481 actacttccc ggcgtcccct gggaggacga cctcgccgcc agcgccggag accttcgcga
      541 cggccgccgg agaggccttc gcgacggtga tccgcattgt catcgttaca cgaccagagc
      601 ctaatagctt gtcgattccc gccgccgtca ggtcgacgtt gattcgagaa tcgtccttct
      661 tcgcatggcc cgcggcttcg aattcgccga tgcgatggac gaggtcttcg aggtcgatcg
      721 cgctcgtcgg gcggggctgc gcgtgccgga agaagccgcg cggtccgaag tgctccgggt
      781 cgtacttgat catccacttg aacttgtgtt tgtgaaggcc cgcgttgccg gtgccgccgc
      841 ggccaccggc accccgtccg tgcttcttgc cgcggccgtg cgtgcgactg ccccgcaact
      901 tccgcgtcct agagggcatc tttcccctcc tcgaggagca tccgcacgag gagcgagttg
      961 atcgcgcctc cgcggtatcc gaggtcgcct ccgtcgtgga agccgcgctt gatcccgcga
     1021 taccctttcc ggggcggcgg cagtcggagg acgggccgga gctcccgcac gtcggcgagg
     1081 gt
//
LOCUS       DATLMA010000326         1454 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_452868, whole genome shotgun sequence.
ACCESSION   DATLMA010000326 DATLMA010000000
VERSION     DATLMA010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452868"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..754)
                     /locus_tag="VNA10_04155"
     CDS             complement(107..754)
                     /locus_tag="VNA10_04155"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HVG36903.1"
                     /translation="MRVGILGSSDVGQALGRGFASRGHDVKLGSRSPKSESLTAWLKE
                     VKGQASTGTFEEAARHGETIVLATRGSAFDEVARLAGPKNFAGKVVIDVQNALEFSGG
                     PNPGLFVGLNDSLAERVQRALPEAKVVKAFNTVPNTQMVDPKFVGGAPEMLIAGNDSA
                     AKKKVVGILREFGWPGAIDVGGIEAARWIEALVPLWALVGSATNRWEHAFKVVHR"
     gene            869..>1454
                     /gene="hxlA"
                     /locus_tag="VNA10_04160"
     CDS             869..>1454
                     /gene="hxlA"
                     /locus_tag="VNA10_04160"
                     /EC_number="4.1.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043801 - hexulose-6-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0019647 - formaldehyde assimilation via
                     ribulose monophosphate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate synthase"
                     /protein_id="HVG36904.1"
                     /translation="MEPVLQVALDHMHLKRALLAAKEAVDGGADWLEAGTPLVKSEGI
                     EVVRQLKKSFPGKTIVADLKTMDTGAFEVEIAAKAGADVITVMGVTDDATILEAVRAA
                     RRYGSKIMVDLMRVADKPARAKELEKLGVDYLNVHVSIDEQMIAHTPLQELKAVAAAT
                     SLPVAVAGGLNSETVGQALKAGASIVIVGGAIIKA"
BASE COUNT          252 a          467 c          476 g          259 t
ORIGIN      
        1 ttggggctcg ctatatgaga tgaacgcgct gagtatcaag gttgaaagca ggccagggcg
       61 gatgcgcgcg ggtcgcggtc gagtcaacct tgtttaaggt taacgctcac cggtggacga
      121 ccttgaacgc atgctcccat cggttcgtcg cggagccgac caaagcccag aggggcacga
      181 gcgcttcgat ccaacgagcc gcttcgatgc cgcccacgtc gatggccccg ggccatccga
      241 actctctcag gatcccgacg actttcttct tcgcggccga atcgttcccg gcgatcaaca
      301 tctccggtgc gcccccgacg aacttcgggt cgaccatctg cgtgttgggg accgtgttga
      361 aggccttcac gaccttcgct tccgggaggg cccgctggac tcgctccgcg agggagtcgt
      421 tgagcccgac gaagagaccg gggttcggtc ctccggagaa ttcgagcgca ttctgcacgt
      481 cgatgacgac tttgcccgcg aagttcttcg gtcccgccag tcgcgcgacc tcgtcgaacg
      541 cggatccccg ggtcgcgagc acgatcgtct cgccatgcct cgcggcctcc tcgaacgtgc
      601 cggtcgaggc ttgtcctttg acctctttca gccacgccgt gagactctcg ctcttcgggc
      661 tccgcgagcc caacttcaca tcgtgtcccc ggctcgcaaa gccgcgaccc agtgcctggc
      721 cgacatcgct gctccccaaa atgccgacgc gcatggtggc gccgaggacg accgttcctt
      781 ttccgccttt gggtcgttgt acgtcggcgg accgcgacgc cgccggagtc gttacgtttt
      841 taagatgagg gcgaggtaag cacggtccat ggagccggtt ctccaggtgg ccttggacca
      901 catgcacctc aagcgcgccc tcctcgcggc gaaggaagcc gtcgacggag gcgcagactg
      961 gctcgaagcg ggcacgcccc tcgtcaagtc ggaaggcatt gaggtcgtcc ggcagctgaa
     1021 gaaatcgttc cccgggaaga cgatcgtcgc ggacctcaag acgatggaca cgggggcgtt
     1081 cgaggtcgag atcgcggcga aggccggggc cgacgtcatc acggtcatgg gcgtcacgga
     1141 cgacgcgacg atcctcgagg ccgtgcgtgc ggcccgccgg tatggctcga agatcatggt
     1201 cgatctgatg cgcgtcgccg acaaaccggc ccgggcgaag gaactggaaa agctcggcgt
     1261 ggactacctc aatgtgcatg tgtcgattga cgagcagatg atcgcacaca cgccgctcca
     1321 ggaattgaag gcggtggccg cagcgacctc gctgccggtc gcggtggcgg gcggcttgaa
     1381 ttcggagacc gtcggccagg ccctgaaggc cggcgcctcg atcgtcatcg tcggcggggc
     1441 gatcatcaag gcgg
//
LOCUS       DATLMA010000327         1321 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_695820, whole genome shotgun sequence.
ACCESSION   DATLMA010000327 DATLMA010000000
VERSION     DATLMA010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695820"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VNA10_04165"
     CDS             <1..757
                     /locus_tag="VNA10_04165"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HVG36905.1"
                     /translation="KLYRGPGADRPAMVFRTQRHRYGVSQAILDALRIRSLAERAIEG
                     ATDLHPSIRLELLSELTQVDLILSDGQGLDIDFERANRIPEADYVRMSEAKTARLYLG
                     AAATAAIAARASSEHRAALETFARHFAIAFQDRDDLLGSGVVESRIGGSAEGDIRQGK
                     RTRLFVLAIQRLAAKDRAAFLRAYGRGPRTTKGDLRSVRELLRAHVLPTMEARIADHL
                     VEAGRALDRLPSKDLEARRLLEALVDAQRSRVR"
     gene            complement(754..>1321)
                     /gene="radB"
                     /locus_tag="VNA10_04170"
     CDS             complement(754..>1321)
                     /gene="radB"
                     /locus_tag="VNA10_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008605226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair and recombination protein RadB"
                     /protein_id="HVG36906.1"
                     /translation="TNFCLQLARNIVRAGRKVIYIDTEGVSLERLRQICGDDFEVVLK
                     NILFSEPYSFEEQEKLIDKAVKLAEGNPDVGLIVIDSITMHYRLTMRDETRRDERYGL
                     TRQIAKLLRASRVRGIPVVVTSQVYTDIDTGMYMPLGGHMLSHNAKTTVRLERTGVST
                     RAAVLMKHRHLEEGARAAFRITAHGLED"
BASE COUNT          215 a          442 c          424 g          240 t
ORIGIN      
        1 gaagctgtat cgcggccccg gcgcggaccg ccccgccatg gtctttcgga cccagcgcca
       61 tcgatacggg gtgtcccaag cgatcctcga tgcgctacgc atccgatcgc ttgccgagcg
      121 ggccatcgag ggcgccacgg acctccatcc gtcgattcgg ctcgaactcc tctctgagtt
      181 gacccaagtc gacctgattc tcagcgatgg ccaaggactc gacatcgact ttgagcgggc
      241 gaatcgaatc cccgaggcag attatgtgcg gatgagcgag gcgaagacgg ctcgcctcta
      301 cctcggtgcg gccgcgaccg cggcgatcgc ggctcgtgcg tcgtccgaac atcgcgcggc
      361 gctggaaaca ttcgcgcgac acttcgcgat tgcattccaa gatcgcgacg accttctcgg
      421 gtccggcgtc gttgagtctc gaatcggtgg atcggccgag ggggacatcc ggcaggggaa
      481 gcgaacccgt ctcttcgtcc tcgccatcca acgactcgcg gccaaggatc gtgcggcttt
      541 ccttcgcgcg tacggacgcg gcccgcgcac gaccaagggc gatctgcgga gcgtgcggga
      601 gctcctccgc gcgcacgtcc ttcccacgat ggaggcccgc atcgcggatc atctcgtcga
      661 agcggggcga gccctcgacc gactcccgtc gaaagacctc gaggcccggc ggttgctcga
      721 agcgctcgtc gacgcacaac gcagccgggt gcgctagtcc tcgagcccat gggccgtaat
      781 ccggaacgcc gcgcgggcgc cttcttcgag gtgtcgatgc ttcatgagga ccgcggcccg
      841 cgtgctgacc ccggtccgct cgaggcgcac ggtcgtcttc gcgttgtgac tgagcatgtg
      901 gccgccgagc ggcatgtaca tgccggtatc gatgtccgtg tacacctgcg acgtcacgac
      961 gaccgggatg ccccggacgc gagacgcgcg caggagcttc gcaatctgtc gggtgagtcc
     1021 gtatcgctcg tcccgccggg tctcgtcccg catcgtgagg cgatagtgca tcgtgatgct
     1081 gtcgatcacg atgagtccga cgtccggatt gccctccgcc agcttgacgg ccttatcgat
     1141 cagcttctcc tgttcctcga agctgtacgg ttcggagaag aggatgttct tcaagacgac
     1201 ctcgaagtcg tccccgcaga tctgccgaag gcgctcgagg gacacgccct cggtgtcgat
     1261 gtagatcacc ttgcgccccg cgcggacgat gttccgcgcg agctggaggc agaagttcgt
     1321 c
//
LOCUS       DATLMA010000328         1071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_695942, whole genome shotgun sequence.
ACCESSION   DATLMA010000328 DATLMA010000000
VERSION     DATLMA010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695942"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..374
                     /locus_tag="VNA10_04175"
     CDS             171..374
                     /locus_tag="VNA10_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36907.1"
                     /translation="MARRGVERPKPTKLRKETREWLTKQTIPNARRIARDLENEGEDV
                     HDLLAAIDELEALLKEGSPKAKP"
     gene            419..489
                     /locus_tag="VNA10_04180"
     tRNA            419..489
                     /locus_tag="VNA10_04180"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:451..453,aa:Gly,seq:tcc)
     gene            complement(581..706)
                     /locus_tag="VNA10_04185"
     CDS             complement(581..706)
                     /locus_tag="VNA10_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36908.1"
                     /translation="MASAAMMVPVNEMYAGADQSWQDVYASYGCSLDFDVSDDDG"
     gene            complement(816..>1071)
                     /locus_tag="VNA10_04190"
     CDS             complement(816..>1071)
                     /locus_tag="VNA10_04190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36909.1"
                     /translation="SRMALLPDLAAAALDAVVVFLLFLGLLVVFVETIPIRLLMVMIL
                     AVILFAAWLAWVGEIGLSFVALGAVAALAANHAFEWLTNR"
BASE COUNT          247 a          297 c          357 g          170 t
ORIGIN      
        1 gggccgcgtc ggacaagtgg ccgacatgga aagtggatga cttatagata tcgccaatgg
       61 ctcgctgcca tggacaatcg gcggtcttcg tcaacgccgg ccgttgtgac aattgcgcta
      121 agtacgcgcg gcctcgattc caagctgaca attgtcagac gggatggacg atggcacgca
      181 gaggagtgga acggccgaag ccgaccaaac tccggaagga aacgagggag tggctgacga
      241 aacagacgat cccgaacgcc cgtcgaatcg cgcgggatct ggagaacgaa ggcgaggacg
      301 tgcatgatct cctcgcggcg atcgacgagc tcgaggcact cctgaaagag ggatccccga
      361 aagccaagcc ttgatccgag gaaggactca agtattcgcg gtcgagtccc ccaacggagc
      421 gtgggtagtc tagcggtaga acttgggcct tccaagccca aagcgcgggt tcgactcccg
      481 ccccacgcac tggacttgtc gctcgaaaaa aaatggggga tcgacggagt cgtggaggcg
      541 accctctccg ccgatcggtg ggatggatgg gttgtgagcg ttagccgtcg tcgtcggaca
      601 cgtcgaagtc gagcgagcat ccgtacgagg cgtagacgtc ctgccagctt tggtctgctc
      661 ccgcgtacat ctcgttcacc gggaccatca ttgccgcgct tgccacggag gtccgaatgt
      721 tcccgccgta taagatgcgg aatgggggag aggtgtgcga aagtattggg cggggggtgt
      781 gaaagtactc gtcggtgatg agcgaatcgg gcgcttcagc ggttcgtcag ccactcaaag
      841 gcgtggtttg ccgcgagcgc ggcgaccgct ccgagggcaa cgaacgaaag tccaatctcg
      901 ccgacccatg caagccacgc ggcaaagaga atcaccgcga ggatcatgac catcaagagt
      961 ctgatcggaa tcgtctcgac gaagaccacg agaagcccga ggaagagcag gaacacgacg
     1021 acggcatcga gcgcggccgc cgcgaggtcc ggcagaagcg ccatccgcga g
//
LOCUS       DATLMA010000329         3162 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_332668, whole genome shotgun sequence.
ACCESSION   DATLMA010000329 DATLMA010000000
VERSION     DATLMA010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332668"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VNA10_04195"
     CDS             complement(<1..459)
                     /locus_tag="VNA10_04195"
                     /inference="COORDINATES: protein motif:HMM:NF025873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HVG36910.1"
                     /translation="MDPHSTMDESYLEWLIGLRGLGEAKARRIAERFPSFEQLRAASR
                     DELSAVEGVTSGDIETLLGLFSDGSARDASGQLFLCPQCGSFAGTTAKSCPFCGVEFE
                     VSADSGLSDQIDDFVAEEEAPARMCLTCGAGMGTAATKCDVCGRSYAPEEL"
     gene            complement(523..1218)
                     /locus_tag="VNA10_04200"
     CDS             complement(523..1218)
                     /locus_tag="VNA10_04200"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HVG36911.1"
                     /translation="MARGLGRALQRAVSREGTDVDLDGEGRSLANARRRQVFRYLCLR
                     PCARIGDISRDLKISPATVRWHTWDLIGNRYLQSEGVSVFPSGLIDPRDVPLFAALAA
                     AGRAATLAAVSDVPGLSFQEIASRVGLTRQSVSKVASELVEFGLVRILDDGRFRRVHA
                     TVLLARKREANRARAEAFGEALLRRLSDEGLAPELVRREETTLLVRFGTGAQRVLLEV
                     PADPYETSWKAPV"
     gene            complement(1220..2086)
                     /locus_tag="VNA10_04205"
     CDS             complement(1220..2086)
                     /locus_tag="VNA10_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG36912.1"
                     /translation="MRKIRSGIYGLNPLLDGGVNENSTTVVIGRSGAGKTTLATQFIR
                     RGLQDGQEGVFVSLDENKEQIIREAVEMGWSDILDYLDNELLVFIDASGREFSNFIRK
                     ELPAFVADWKGSNARIVVDPLTPVLWSTKDLYEQRDLIGYMFKQTRKVGTVLCTLEEH
                     GPGDLAGPETVIPMYLADCVVHLKFNSDQANPSRLLNIVKCRNSRHSPSAHAFQIVRG
                     LGIVIEGVDGRKPVSAKAPSQLRQLLLTHSMPKNVRDALEKSLDGLTDDDFRTLKPEQ
                     VLDLIIQEYQGA"
     gene            complement(2153..2491)
                     /locus_tag="VNA10_04210"
     CDS             complement(2153..2491)
                     /locus_tag="VNA10_04210"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HVG36913.1"
                     /translation="MLQVRNPDAFQESVVKANEPTVVMFWATWCPFCRRFKQEFEKLA
                     AGRPWRFAAVYLDDEDNPLWEDYAVDVVPTLALFRDGKVVDRLDGILGYGIDQKMVDE
                     FVRRLQPELA"
     gene            2620..>3162
                     /locus_tag="VNA10_04215"
     CDS             2620..>3162
                     /locus_tag="VNA10_04215"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177373.1"
                     /note="unique DNA polymerase that is similar to eukaryotic
                     polymerases; forms a heterodimer of the small and large
                     subunits; possesses polymerization and 3' to 5'
                     exonuclease activities; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HVG36914.1"
                     /translation="MGSPVASEEVRGYFAGLLKQVEATYAVARAARTRGFDPELEVEI
                     PLTDDLASRVERLLEHYEVEGVARRIRELAKTHDREELAILVAKEMAVRPATSKEKAV
                     ERAVRVGLAILTEGILVAPLEGLAGVKIKRNRDGTSYVGLSYAGPIRSAGGTGQALSV
                     LIADIVRRELGLGRYMPTREE"
BASE COUNT          572 a         1009 c         1031 g          550 t
ORIGIN      
        1 aagttcttcg ggagcgtatg accgtccaca tacgtcgcac ttcgtcgctg ccgtgcccat
       61 gccggcaccg cacgtgagac acatgcgggc cggggcctcc tcttcggcga cgaaatcgtc
      121 gatctgatcc gacaaaccgg agtcggccga gacctcgaac tcgacgccac agaacggaca
      181 cgatttcgcc gtggtcccgg cgaaggatcc gcattgcgga cagaggaaga gctggcctga
      241 tgcatcccgt gctgaaccgt ccgagaagag accgaggagc gtctcgatgt caccggacgt
      301 gacgccttcg acggcggaca gttcatcccg gctcgcggcc cgcagctgtt cgaacgaggg
      361 gaaccgttcg gcaatccgcc gggctttcgc ctcgccgagc cctcggagtc cgatcagcca
      421 ctcgagatag ctctcgtcca tcgtcgagtg ggggtccacg tgctacttaa agcgcgttgt
      481 atcgtccgta tcacgccgtc tattcaatcc gttaacatgg cctcagacgg gcgccttcca
      541 cgaggtctcg tacggatccg ccgggacttc caagaggacc cgttgggcgc ccgtgccaaa
      601 ccggacgagc agcgttgtct cttcgcgtcg cacgagttcc ggcgccagac cttcgtctga
      661 cagtcgccgg aggagcgcct ccccgaacgc ctcggcgcgg gcccggtttg cctcgcgctt
      721 ccgggcaagc agaacggtcg catgaacgcg gcggaagcga ccgtcgtcga ggatgcgcac
      781 gagaccgaat tcgacgagtt ccgaggcgac cttgctcacg gactgtcggg tgagccccac
      841 gcgggacgcg atctcctgga acgagaggcc ggggacgtcg gacaccgccg cgagggtggc
      901 ggcccgaccg gccgcggcga gggcggcaaa gagcggcacg tcccgcggat cgatgagtcc
      961 ggagggaaag acgctcaccc cctcggactg gagatatcgg ttcccgatga ggtcccacgt
     1021 gtgccagcgc acggtcgcgg gggatatctt caggtcccga ctgatgtctc cgatccgggc
     1081 gcacggtcga aggcagaggt agcggaacac ttgccgacgc cgcgcgttcg cgaggctgcg
     1141 gccttcgcca tccaagtcga catcggtccc ttcccgggac accgcccgct gcagggcacg
     1201 acccagcccg cgggccacgt catgccccct gatactcctg gataatcagg tcgaggactt
     1261 gctccggctt cagcgtgcga aagtcgtcgt ccgtgagtcc gtccaaggat ttctcgagcg
     1321 cgtcgcgcac gttcttcggc atcgaatggg tgagcaggag ttgacggagc tgggacggtg
     1381 ccttcgccga gacgggcttt cggccatcga ccccttcgat cacaatcccg aggccgcgga
     1441 cgatctggaa tgcgtgcgcc gacggactgt gtcggctgtt gcgacacttg acgatgttca
     1501 ggagccgcga cggattcgcc tggtcgctgt tgaacttcag gtggacgaca cagtccgcga
     1561 ggtacatcgg gatcacggtc tccggaccgg cgaggtcccc tgggccgtgt tcctcgagcg
     1621 tacacaggac cgttcccacc tttcgcgtct gcttgaacat gtagccaatc aggtcccgtt
     1681 gctcgtacag gtccttcgtc gaccagagga ccggcgtgag cgggtcgacg acgattcgag
     1741 cgttgctgcc tttccagtcc gcgacgaacg ccggaagttc cttgcggatg aaattggaaa
     1801 attctcggcc cgatgcgtcg atgaagacga ggagctcgtt gtcgagatag tcgaggatgt
     1861 cggaccagcc catctcgacc gcctcgcgga tgatctgctc cttgttctcg tcgagcgaga
     1921 cgaagacgcc ttcctggccg tcctgcaagc cgcggcggat gaactgcgtg gccagggtgg
     1981 tcttgcccgc accggagcga ccgatcacga cggtcgtgct gttctcgttg acgccgccgt
     2041 ccaaaagcgg gttgagtccg tagattccac tccgaatctt acgcacgcga tttcatcccg
     2101 gcgggagccc gataaacgtg ccgacctgag aatcaggcac gaaatcgaat gctcacgcga
     2161 gttcaggttg gagccggcgg acaaactcgt cgaccatctt ctggtcgatc ccgtacccga
     2221 ggattccgtc cagtcggtcg acgaccttcc cgtcgcggaa cagcgcgagg gtcgggacca
     2281 cgtcgaccgc gtagtcctcc cagagcggat tgtcctcgtc gtccaggtac acggccgcga
     2341 atcgccacgg tcgcccggcg gcgagcttct cgaattcctg tttgaaccgc cgacagaacg
     2401 gacaccacgt ggcccagaac atgacgacgg tcggctcgtt ggctttcacg accgactctt
     2461 ggaatgcgtc gggattccgg acctgcaaca tcgccggtgc gttcacgaca ttcgagagcg
     2521 ataaagcttc acacgtgaag attcgcgcgt cacgcgacgc aaagacatat acgagatacc
     2581 ccggatacga cccgccgctc gcgctctcga agggatggaa tgggttcacc ggtcgcttcc
     2641 gaggaggtcc gcggctattt cgcgggcctg ctgaagcagg tcgaggcgac gtacgcggtc
     2701 gcccgggccg caaggacgcg gggtttcgat ccggaactcg aagtggagat cccgctgacg
     2761 gacgacctcg cctctcgcgt cgaacggctc ctcgagcact acgaggtcga gggtgtggcg
     2821 cggcggattc gcgagctcgc gaagacccac gatcgcgagg agctcgcgat tctcgtggcg
     2881 aaggaaatgg ccgtgcggcc cgcgacgagc aaggagaagg cggtcgagcg cgccgttcgg
     2941 gtcggcctcg cgatcctcac ggaagggatc ctcgtcgcgc cgctcgaagg cctcgcgggg
     3001 gtcaagatca agcgcaatcg ggacggcacc tcgtatgtcg gcctatcgta tgccggtcca
     3061 atccgctccg cgggcgggac cgggcaggcg ttgagcgtgc tgatcgccga catcgtgcgg
     3121 cgggagctcg gcctgggacg atacatgccg acgcgagagg ag
//
LOCUS       DATLMA010000330         1711 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_696236, whole genome shotgun sequence.
ACCESSION   DATLMA010000330 DATLMA010000000
VERSION     DATLMA010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_696236"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VNA10_04220"
     CDS             <1..401
                     /locus_tag="VNA10_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015504465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HVG36915.1"
                     /translation="SRAEFDVLVETVLKIDDRLNKEVQKRGLIHVDGKKEFAMDDARR
                     LMLVDTFGTADEDRFWDLDAYKKGQQVELSKEFVRQYYRKTGYHQKLMEAREAGKPEP
                     DIPPLPADVAKQVSELYVGLFERLTGEKFR"
     gene            476..1378
                     /gene="ilvE"
                     /locus_tag="VNA10_04225"
                     /pseudo
     CDS             476..1378
                     /gene="ilvE"
                     /locus_tag="VNA10_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980767.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
     gene            1410..>1711
                     /locus_tag="VNA10_04230"
     CDS             1410..>1711
                     /locus_tag="VNA10_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013878416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HVG36916.1"
                     /translation="MKFLEYKAKEIFARYRIPVPRGVVASSPAEILDPPLPCMVKAQV
                     LVGGRGKAGGIKPAESLDEARTVAGQILGMDIHGYRVKQVYLEERLEIGQELYLGVT"
BASE COUNT          373 a          518 c          536 g          284 t
ORIGIN      
        1 tcagccgtgc ggagttcgac gtcctcgtcg agaccgtgct gaagatcgat gaccggctca
       61 acaaggaagt ccaaaaacgc ggtctgatcc atgtggacgg caagaaggag ttcgcgatgg
      121 acgatgcgcg gcgcctgatg ctcgtggaca ccttcggcac ggcggacgaa gaccgcttct
      181 gggatcttga tgcatacaag aaggggcagc aggtcgaact gagcaaagag ttcgtccggc
      241 agtactaccg caagacgggg taccatcaaa agctgatgga ggcgcgggag gcaggcaagc
      301 cggagcccga catcccgccc ctccccgccg acgtcgcgaa gcaggtcagc gaactgtacg
      361 tcggcctctt cgagcgactc acgggtgaaa agttccgtta ggatgcgttt tgggaaacgc
      421 ggaacaaagt cttttagtga aagcggtgat acattccgcg gtcggggtct ccggtatgga
      481 gttaagtgtc tacgtcgacg gcaagttcta cccgcagtcc gaggcgaagg tcagcgtctt
      541 cgaccacggc ctcctctacg gcgacggcgt attcgaagga atccgcgcgt acaacggccg
      601 agtcttcaaa ctggaccgcc acctcgaacg actgtaccac tcggccaagg ccatcgacct
      661 gaagatcccg cacacgaagt aggagatggc gaacatcatc ctcgagacat gccgccggaa
      721 cgacatccat gaggggtaca tccggcccgt catcacgcgg ggcaaagggg atctcggact
      781 cgatccgcga aaatgcaaga gcggaccgag cgtggtcgtg atcgcgcagc ccggcatctc
      841 tctgtacggc aaggtctacg agcggggctt gaaggtcgtc acctcttcgt atcgtcgcgt
      901 gccaccgcaa agcctgagcc cttcgatcaa gtcactgaac tacctgaaca acatcatggc
      961 ccgcgtcgag gcgaaccaat acggagcgga cgaggcgttg atgctcgaca tccacgggta
     1021 cgtgtccgag gcgaccgcgg agaacttctt catcgtccgc aactcgacga tcgtcacgcc
     1081 ctggacctcc acgaacctcc ccggcgtcac gcgagagacg gtcctcgaaa tcgtcccgca
     1141 gctcggcttg aagtcggagg aacggctctt caccctgtac gatgtctggt ccgcggacga
     1201 ggcgttcatc agcgggactg ccgcagagat cgggccggtc gttgaactgg acggtcggac
     1261 gatcggagat ggcaaacccg gaccgacgac gaagcggatc atgaaggcgt tccgcgacct
     1321 cgtgataacg acgggtacgc caatcggggc ggcgcacgcg atatcgcaaa agatataggc
     1381 cctccaccca tcggcggctc cggtcccgcg tgaagtttct cgaatacaag gcgaaggaga
     1441 tcttcgcccg atatcgcatc ccggtccctc ggggggtcgt tgcatcctcc ccggccgaaa
     1501 tcctcgatcc gccgctcccg tgcatggtga aggcgcaggt gctcgtcggc ggccgaggca
     1561 aggccggggg catcaagccg gccgagtcat tggacgaggc ccgcacggtc gccggacaaa
     1621 tcctcgggat ggacatccac gggtatcgcg tgaaacaagt gtacctcgag gagcgcctgg
     1681 agatcgggca ggaactctac ctcggcgtca c
//
LOCUS       DATLMA010000331         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_821479, whole genome shotgun sequence.
ACCESSION   DATLMA010000331 DATLMA010000000
VERSION     DATLMA010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_821479"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..479
                     /locus_tag="VNA10_04235"
     CDS             144..479
                     /locus_tag="VNA10_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006195868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HVG36917.1"
                     /translation="MATITFEDFQKVEMRVGRIVAAEDFPEARNPSHRLRIDFGPHGV
                     RKSSAAVQPWYRATDLVGRTIVAVTNFPPRQIGLFMSEVLCLGAVQSDRRVILLQPDT
                     EGELGARIA"
     gene            463..954
                     /locus_tag="VNA10_04240"
     CDS             463..954
                     /locus_tag="VNA10_04240"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HVG36918.1"
                     /translation="MLGSHDPRREFLIRSCGMLIHEQSVLAQEAVDDRGGKVYALPGG
                     HLEFGESLAACMSREFYEESGLNVEAEKLVYVHENFYTLKGVTTHEIGFYFLVDLNSE
                     FPGADPAGYIPSRESHIRMRLLPLARLSAVKLMPPFLRDELANEVRDHFARPTRHLIS
                     REE"
     gene            958..>1296
                     /locus_tag="VNA10_04245"
     CDS             958..>1296
                     /locus_tag="VNA10_04245"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36919.1"
                     /translation="MAIRIRPMRGSDYDAMIALFRVCGMNLKTKGRDSLRSFTAQLRR
                     NADSYLGAFDGDRLVGTVLGTHDTRKGWINRLAVDPRYRRRTIAARLVRRCELVLRKK
                     GFEMFAALIEP"
BASE COUNT          229 a          418 c          408 g          241 t
ORIGIN      
        1 gacgagtcgg gaggaacacg agcggctgtg tcgacgactc ggtgtccgcg tgaccgattc
       61 ccgcgcccac tgacgcgccg gcccttttcc gaatgcccgg aaagagtcaa atcgaccgag
      121 acctttccgc gcggccggat accatggcca caatcacctt cgaggatttt cagaaagtcg
      181 agatgcgcgt cggtcggatc gtcgccgccg aagatttccc ggaggcgcgt aatccatcgc
      241 accggctgcg aatcgatttc ggcccccatg gggtgcggaa gtcctccgcc gcggttcaac
      301 cgtggtaccg ggcgaccgat ctcgtcggtc ggaccatcgt cgcagtcacg aacttcccgc
      361 ctcgccagat cggcctgttc atgtcggagg tcctctgtct cggagccgtc cagtcggacc
      421 gccgggtcat cctgctccag cccgacacgg agggggagct cggtgctcgg atcgcatgac
      481 ccgcgccgcg aattcctgat ccgttcgtgc ggcatgttga ttcacgagca gtccgtgctc
      541 gcccaggagg cggtcgacga ccggggaggc aaggtctatg cgctgcccgg cggccacctt
      601 gaattcgggg agagcctcgc ggcctgcatg agccgcgaat tctatgagga gagcggcctc
      661 aatgtcgaag cggagaagct cgtctacgtg cacgagaact tctacacgct gaagggggtc
      721 acgacacacg agatagggtt ctactttctt gtcgatctga actcggaatt ccccggggca
      781 gatccggccg ggtacatccc gagccgcgaa tctcacatcc gcatgcggct gctcccgctc
      841 gcgcgcctct cggccgttaa gctgatgccg ccgttcctgc gcgacgagct ggccaatgaa
      901 gtccgggacc atttcgcgcg accgacccga catctcatct cccgggagga gtagaccgtg
      961 gcgattcgaa tccgtccgat gcgcggatcc gactacgatg cgatgatcgc acttttccgc
     1021 gtgtgcggca tgaatctgaa gaccaaggga cgggacagcc ttcgctcgtt caccgcacaa
     1081 cttcgtcgga atgcggattc gtaccttggc gccttcgacg gcgaccggct cgtagggacc
     1141 gtcctgggga cgcacgacac ccggaagggc tggatcaacc gtctcgcggt cgatccgcgg
     1201 taccgtcgac gcacgatcgc ggcgcgtctg gtccggcgtt gtgagctcgt cctccggaag
     1261 aagggattcg agatgttcgc cgccctgatt gaaccg
//
LOCUS       DATLMA010000332         1247 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_513927, whole genome shotgun sequence.
ACCESSION   DATLMA010000332 DATLMA010000000
VERSION     DATLMA010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513927"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VNA10_04250"
     CDS             complement(<1..779)
                     /locus_tag="VNA10_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36920.1"
                     /translation="MKKIAIALTLVFCAAVPASAQFGKNKIVYDRFDWKIYRSTHFAV
                     YFYESERPALAKVTSYAESAYDDISRALNFQIPKPINLIYYATHSDFEQTNTLLNFIP
                     EGVGAFSLPSRNRMVLPIDLPDEKLQQLIGHELTHVFQFEILFGGNYIRAATTNAPQW
                     FMEGMASYFGNDEDNKDRMVLRDAVLADQVPQIAQTGNVAGFFAYRFGHSVFDFMEAE
                     WGKDAVRDFVFEFRNQIGGNVEKVIKRAFNLSAEDFDVKFRR"
     gene            complement(936..>1247)
                     /locus_tag="VNA10_04255"
     CDS             complement(936..>1247)
                     /locus_tag="VNA10_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36921.1"
                     /translation="EFRVEDRSGYKTEEYVSPIDSRTYYRQVYVEQTGFLFDIVFMVF
                     DGRSGEKILQDEFKDFRQTGGRRADELQGLFENLFSLENQILNLFVARDREAERYIFT
                     D"
BASE COUNT          234 a          349 c          416 g          248 t
ORIGIN      
        1 cggcggaact tgacgtcgaa gtcctcggct gaaaggttga aggcgcgttt gatcaccttt
       61 tcgacgttgc cgccgatctg gttgcggaac tcgaaaacga agtcgcggac cgcgtctttg
      121 ccccattccg cctccatgaa atcgaagacc gaatggccga accggtacgc gaagaagccg
      181 gcgacgttac cggtctgggc gatctgcggg acctggtcgg cgagaaccgc gtcgcggagc
      241 accatccgat ccttgttgtc ttcgtcgttt ccgaagtagg aggccattcc ttccatgaac
      301 cactgcggcg cattcgtcgt ggcggcccgg atgtagttgc ctccgaaaag gatctcgaac
      361 tggaacacgt gggtgagctc gtggccgatg agctgctgca gcttctcgtc ggggaggtcg
      421 atgggaagca ccatccggtt gcgcgacggc agcgagaaag cgccgacccc ttccggaatg
      481 aagttcagga gggtgttcgt ctgctcgaaa tcggagtggg tggcgtagta gatcaggttg
      541 atcggcttcg gaatctggaa gttgagagcg cgcgaaatgt cgtcgtacgc gctctcggcg
      601 taggacgtga ccttggcgag cgccggccgc tccgactcgt agaaatagac ggcgaagtgg
      661 gtcgagcgat agatcttcca gtcgaaacgg tcgtagacga tcttgttctt cccgaactgc
      721 gcggaggccg gaacggcggc gcagaagacg agggtgagcg cgatcgcgat cttcttcatg
      781 tcgcaagccc tcctcaatat catcccgagt ccttcgctcc gctcaggaca ggcttcgcga
      841 agagatccct cgcgccccgg gcgctcggga tggtgaagga ggcgctcgct gctgtatacg
      901 ggatatcgga tggtcggtgc ctcggccggt ccggctcagt cggtgaagat gtaccgctcg
      961 gcttcccggt cgcgagcgac gaagaggttc aggatctggt tctcgagcga gaagaggttc
     1021 tcgaagaggc cctgcagctc gtcggcgcgg cggccgccgg tctggcggaa gtccttgaac
     1081 tcgtcctgga ggatcttctc gcccgagcgg ccgtcgaaga ccatgaacac gatgtcgaaa
     1141 aggaacccgg tctgctcgac gtagacctgc cggtagtagg tccggctgtc gatcggggag
     1201 acgtattcct cggtcttgta gccggagcga tcttcgacac ggaactc
//
LOCUS       DATLMA010000333         1035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_33188, whole genome shotgun sequence.
ACCESSION   DATLMA010000333 DATLMA010000000
VERSION     DATLMA010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33188"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VNA10_04260"
     CDS             <1..276
                     /locus_tag="VNA10_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36922.1"
                     /translation="VLVTSLYIVVMTAYLTGLRTNSFLFDPGVLARFSVMSMLPDFGL
                     TILSFTIDRDLRLSAIGIGIVLTILGAITYILLKGIDAKWRGTEFGE"
     gene            296..901
                     /locus_tag="VNA10_04265"
     CDS             296..901
                     /locus_tag="VNA10_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36923.1"
                     /translation="MDGNAAFRRAMHIVSPVFLSYYLLPEDLRPGSGVTRTSVTLLFL
                     GTAACIEIARMALGVRLFGMRPYEGKRVSAYAQGALGLGLALFLFGDLLGSRAPYFVV
                     PVFLGMAWIDPIAALARRRSWPRSAVIAAYFVLFLATEYAMLGTRAWSWQFVFAVLAT
                     GSAMIVEGPKHRQLDDDLLMLVVPLAVLTAVVILFAPPALP"
BASE COUNT          146 a          348 c          315 g          226 t
ORIGIN      
        1 gtcctcgtca cctcgctgta catcgtcgtg atgacggcct acttgacggg cctgcggacc
       61 aactcattcc tcttcgaccc cggcgtgctc gcgcggttca gcgtgatgtc gatgctcccg
      121 gatttcgggc taacgatcct gtccttcaca atcgatcggg accttcggct ctcggccatc
      181 ggcatcggca tcgtcctcac aatcctgggc gcgataacgt atatcttgct caagggcatt
      241 gacgcgaaat ggcgcggcac ggaattcggc gagtgatggc cgcggggtca acaccatgga
      301 cggcaacgcc gccttccgtc gagccatgca tatcgtttcg ccggtctttc tgtcgtacta
      361 tctgctgccg gaggatctcc gacccggcag cggcgtcacc cgcaccagcg tgacgctcct
      421 cttcctaggg acggcggcat gcatcgagat cgcacgaatg gcactcggcg ttcggctgtt
      481 cggcatgcgg ccgtacgagg gcaaacgggt ttcggcatac gcccagggag cgctcggcct
      541 ggggctcgcg cttttcctgt tcggagacct cctcgggagc cgcgcaccct actttgttgt
      601 cccggtattc ctcgggatgg cgtggatcga tcccatcgcg gcgctcgccc ggagacgatc
      661 gtggcctcgg tccgcggtca tcgccgcgta tttcgtgctc ttcctcgcga cggagtatgc
      721 gatgctcgga actcgcgcgt ggagttggca gttcgtcttc gcggtgctcg cgaccggctc
      781 cgcgatgatc gtcgaaggtc cgaagcaccg tcagctggac gatgatctgc tcatgctcgt
      841 cgtgccgcta gcggtcctca ccgcggtcgt gatcctcttc gcgccgccgg ccctaccgta
      901 ggacctcgag cttcccgtac cggcccgcgc tgacctgcat gttgccccgc cactcgcgga
      961 cccatccgtt cgtgatgcgg atgcggtcgt tcgtctggac ccgttcgatc tcgtcgttcc
     1021 agaggctgac cgaga
//
LOCUS       DATLMA010000334         1066 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_214556, whole genome shotgun sequence.
ACCESSION   DATLMA010000334 DATLMA010000000
VERSION     DATLMA010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214556"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /locus_tag="VNA10_04270"
     CDS             complement(<1..412)
                     /locus_tag="VNA10_04270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36924.1"
                     /translation="MQRSGMSNALYAILAMALVTSVGAGVAIHAMESESPENLVTVEG
                     TVTAVAWNPHFNESVELRLTTANGTNYSVELAPPSWWAQQNFTTIHVNDTLKVEGRLD
                     DGHEIQAFTVWVNGGNAIVVRTGEMPPWAQERSGH"
     gene            460..>1066
                     /locus_tag="VNA10_04275"
     CDS             460..>1066
                     /locus_tag="VNA10_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36925.1"
                     /translation="MRTIGSWAVTPRYTRPHRTTPRFNIEADSSLERNAEECAIHRSE
                     RTIFSIRAAVLVLVGALLVLVLGISAPIVRAAGPTLTIVSPADHAVIGNGTPVAVIFV
                     VSDFNLTPPGTGGPSPTEGHVAVYVDGVLTMATSQETIELPLASGTYVVLLRLVTDNG
                     TSLNPDVTSSISVTVTQGPAVGTPRVHITYIDITNPTPGLVL"
BASE COUNT          193 a          356 c          317 g          200 t
ORIGIN      
        1 cgtggccgga tcgttcctgg gcccacggag gcatctcgcc ggtccggacc acgatcgcgt
       61 tcccgccgtt gacccagacc gtgaacgcct ggatctcgtg gccgtcatcg agcctgcctt
      121 cgaccttcag cgtgtcattc acgtggatcg tcgtgaagtt ctgctgggcc caccacgacg
      181 gaggcgcaag ctcgacgctg tagttcgtcc cgttcgcagt cgtcagcctg agctcgacac
      241 tctcgttgaa gtgcggattc caagccacgg cggtcaccgt gccctcgacc gtcaccaggt
      301 tctccggcga ctcggactcc atcgcatgaa tggcgacacc ggcaccgacc gaggtcacaa
      361 gtgccatcgc gagaatcgcg tacaaagcgt tcgacattcc actcctctgc atcggtccac
      421 gttcggccgc gggttaaggc ttgttgaaca ttcgtcgaaa tgagaacaat cggaagctgg
      481 gccgtcacgc ctcgatacac caggccacac cgcaccacgc cgaggtttaa tatcgaagcc
      541 gattcatccc tcgagagaaa cgcggaggag tgcgcgatcc accgttctga acggacgatc
      601 ttcagcatcc gagccgcggt actcgtcctc gtcggcgctc tcctggttct ggtgctggga
      661 atctcggcgc cgatcgtccg agccgcgggg ccaacgctca cgatcgtctc tccggcggac
      721 cacgccgtca tcgggaacgg gactcctgtc gcagtgattt tcgtcgtctc cgatttcaat
      781 ctcacgccgc ctgggaccgg agggccgtcg ccgacggaag ggcacgtggc cgtctacgtg
      841 gacggggtgc tgacgatggc cacgagccag gagacgatcg agctcccgct cgcatcggga
      901 acgtacgtag tcctgttgcg gctcgtcacc gacaacggga cgtcgctgaa tcccgacgtg
      961 acgtcctcga tctcagtcac cgtgacgcag gggcctgcgg tcggaacgcc gcgagtccac
     1021 atcacataca tcgatatcac gaatccgacg ccgggactgg tcctgg
//
LOCUS       DATLMA010000335         1013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_276168, whole genome shotgun sequence.
ACCESSION   DATLMA010000335 DATLMA010000000
VERSION     DATLMA010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276168"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VNA10_04280"
     CDS             complement(<1..832)
                     /locus_tag="VNA10_04280"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HVG36926.1"
                     /translation="MRRLIVTEKFNASIRIATILSGGKSKRSYVEGTPVFEFTQGEDR
                     VQVVGLRGHIINLDYPDALNDWARVALKELVWAEPQKVVTAGKIGAALKVLAAQADEV
                     VIATDFDREGELIGVEALGLIREARPEIRVRRARFSALTKWDIEDAFANLVDVDFPLA
                     WSAESRQSVDLAWGAVLTRFVSIASKQLGRDFLSVGRVQSPTLALIVDREREIENFVP
                     QDFWTVHAKFRKGVDGAPVEFETNHEHGPFWARREAETAMAQAEAAAQGIVREYLQNE
                     R"
BASE COUNT          161 a          339 c          320 g          193 t
ORIGIN      
        1 cgcgttcgtt ctgaagatac tcgcgcacga tcccttgcgc cgcggcctcc gcctgagcca
       61 tcgcggtctc ggcttctcgg cgcgcccaga acgggccgtg ctcgtgattc gtctcgaact
      121 cgaccggagc tccgtcgacc cccttccgga atttcgcatg cacggtccag aaatcctgcg
      181 ggacgaagtt ctcgatctct cgctcccggt ccacgatcag cgcgagggtc gggctctgca
      241 cgcggcccac ggagaggaag tcccgtccga gctgtttcga tgcgatcgaa acgaagcgtg
      301 tgaggacggc accccacgcc aggtcgaccg attgtcggga ctcggcggac caagcgagcg
      361 ggaagtcgac gtccacgaga ttcgcgaacg cgtcctcgat gtcccatttg gtgagcgcgg
      421 agaaccgggc ccggcgcacg cggatctccg gtcgggcctc gcggatgagc ccgagggcct
      481 cgacgccgat gagttcgccc tcccggtcga aatcggtcgc gatgacgact tcgtccgcct
      541 gagccgccag gaccttcagc gccgccccga tcttcccggc ggtcacaacc ttctggggct
      601 ccgcccacac gagctccttg agggcgaccc gcgcccagtc gttgagggca tccggataat
      661 cgaggttgat gatgtgtccg cggaggccga ccacttggac gcggtcttcg ccctgggtga
      721 attcgaagac gggcgttcct tccacgtacg accgcttcga ttttccgccg ctgaggatcg
      781 tcgcgatccg gatcgaggcg ttgaacttct ccgtcacaat gagtcggcgc acggaaaggc
      841 tcgcacgcaa ggggctctat ttaaccgttt gtcgctggat gttcccgccg aggattcctc
      901 gcgcgcgcgt ttcttcgagt gcgcgtgcgc ggcacgcgtc accggcgaga cgcctctgaa
      961 aacgcacgtc ggatcgcttc ggtcgtttgt cgaggatccg tcgcgtccat gat
//
LOCUS       DATLMA010000336         1004 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_33638, whole genome shotgun sequence.
ACCESSION   DATLMA010000336 DATLMA010000000
VERSION     DATLMA010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33638"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VNA10_04285"
     CDS             <1..745
                     /locus_tag="VNA10_04285"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HVG36927.1"
                     /translation="ELVGKIRALKTKSDEELRKLQSDVVTYNTTEWFSRSGPIAGIGA
                     NPEFSKEAWALKVGEVSTTPISTSRGPAFVRPLAERPAGIQPLSEVRAVVVEDWKSER
                     RQKDALEKLAPVARELGSGTTLADLAKRYETEVKTTSEFGPQGPVPDLGAAPRLLDAV
                     FKTPSGQAGPPVPVPSGFVLFRVLTRAEGNPSAFATQRAQLTDALRAKEAERLIRAVV
                     TQMRADRKIEVNEELLNSFLPAQQKTRRG"
     gene            845..>1004
                     /locus_tag="VNA10_04290"
     CDS             845..>1004
                     /locus_tag="VNA10_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HVG36928.1"
                     /translation="MIGRLVGRLASKATDHVILDVGGVGYLVQIPLSTFYELPEEGSP
                     VSLWIHTHV"
BASE COUNT          179 a          322 c          334 g          169 t
ORIGIN      
        1 ggagctcgtg ggcaaaatcc gcgcgctcaa gacgaaatcg gacgaggagc tccgcaagct
       61 ccagagcgac gtcgtgactt acaacaccac agaatggttt tcccgcagcg gtccgatcgc
      121 gggaatcggc gcgaaccccg agttctcgaa ggaagcgtgg gctctcaagg tcggggaggt
      181 ttcgacgact ccgatttcga cgtcgcgcgg cccggccttc gtccgtccgc tcgccgagcg
      241 gccagcggga atccagcctc tcagcgaggt ccgcgcggtc gtcgtggagg actggaagtc
      301 cgaaagacgc cagaaagacg cgttggagaa gctcgcgccg gtggcgcggg agctcggatc
      361 cggaacgacg ctcgccgatc tcgcgaagcg ttacgagacc gaagtgaaga cgacgtcgga
      421 gttcgggccg caaggtcccg tgccggacct gggggccgct ccgcgacttc tcgacgcagt
      481 cttcaagacg ccgtcggggc aggcgggccc gccggttccg gtgccttcgg ggttcgttct
      541 cttccgcgtg ctcacccgcg cggagggaaa tccctcggcc ttcgccacgc agcgggcgca
      601 gctcacggac gcgctgcgcg cgaaagaagc ggagcgactc attcgcgctg tcgtgaccca
      661 gatgcgagcg gaccgcaaga tcgaggtcaa cgaggagctg ctgaactcgt tcctgccggc
      721 gcagcagaag acgagacggg ggtagcttcc tcctgtcatc ctgaggcgtg cagcgccgaa
      781 ggatccctcc cttcaacgga tccctcgctt cgctcgggat gacggtggga aatacaatcc
      841 acccgtgatc ggtcgcctcg tcgggcgtct cgcgtcgaag gcgacggatc acgtgatctt
      901 ggacgtcggc ggtgtcggct acctcgtcca gattccgctc tccacctttt atgagcttcc
      961 ggaagaggga agtcccgttt cgctctggat ccacacgcac gtcc
//
LOCUS       DATLMA010000337         2667 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_333178, whole genome shotgun sequence.
ACCESSION   DATLMA010000337 DATLMA010000000
VERSION     DATLMA010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333178"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..129
                     /locus_tag="VNA10_04295"
     CDS             28..129
                     /locus_tag="VNA10_04295"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HVG36929.1"
                     /translation="MLLAVNHEVVRPDVVLREGDEVALLPPVSGGDR"
     gene            126..521
                     /locus_tag="VNA10_04300"
     CDS             126..521
                     /locus_tag="VNA10_04300"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HVG36930.1"
                     /translation="MIEIQRARIDVETVVNSVRRDDAGAIVVFLGSVRSDPEVQALDY
                     EVYKPMAVRTLTELVERVKEKFGVLEMSIVHRVGRVPIGGDSVVLACAAVHRSEAFAG
                     CAWVMDEVKRIVPIWKTEAGPRKPRSRRA"
     gene            complement(633..1010)
                     /locus_tag="VNA10_04305"
     CDS             complement(633..1010)
                     /locus_tag="VNA10_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36931.1"
                     /translation="MAGLKKIVGVTLAVVLATALIAYMLRPSATPTTTSTSEPGTPTT
                     QPPPTDQGTCRDQDHGHHDSDCDNATGSGHDSDQDNETGDHDGTSGHSDDNETNDHES
                     HDGESDQNEAGHTSDGHDSDDDS"
     gene            complement(1414..1749)
                     /locus_tag="VNA10_04310"
     CDS             complement(1414..1749)
                     /locus_tag="VNA10_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36932.1"
                     /translation="MIRRKTAVAVLIAVIVGAAFAAYTFRPRATNSSVAVNQPGTDNG
                     NPGSGTTPSTPPTPPAKASNGPKHDKCVHENDHIPDQARVHGANWYRFYDRAACTALQ
                     SLEDFVSIF"
     gene            2055..2522
                     /gene="moaC"
                     /locus_tag="VNA10_04315"
     CDS             2055..2522
                     /gene="moaC"
                     /locus_tag="VNA10_04315"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010876444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HVG36933.1"
                     /translation="MAKMVDIGKKPDVRRRAVATGLIRLRPATIRAIRAQHVEKGDPL
                     STAEVAALQAMKAVWQVLPHTHPIPITAGSVTFDVGPDRISATTTVEATYKTGVEMEA
                     LYSVTVALLTIWDMVKGLEKNSDGQYPSAAIETVRVVSKEKQRPTVRRSANRR"
BASE COUNT          441 a          828 c          880 g          518 t
ORIGIN      
        1 ccgcggctcc tcggccacgg gaacagcatg ctcctcgcgg tgaaccacga ggtcgtgcga
       61 cccgatgtcg tgttgcgaga aggggacgag gtcgccctct tgcctcccgt gagcggaggc
      121 gatcgatgat tgagatccaa cgtgcccgga tcgacgtcga aacggtcgtg aacagcgtgc
      181 gccgggatga tgcaggggct atcgtcgtct tcctcgggtc tgtgcgatcg gatcccgagg
      241 tgcaagccct cgactacgaa gtctacaagc cgatggccgt gcggaccttg actgagctcg
      301 tggaacgcgt gaaagagaag ttcggtgtcc tcgagatgtc gatcgtgcac cgcgtaggcc
      361 gtgtcccgat tggaggggac tccgtcgtcc tcgcgtgcgc cgccgtccac cggtccgagg
      421 cattcgccgg atgcgcctgg gtgatggacg aggtcaagcg gattgtccca atctggaaga
      481 ccgaagccgg tccgcgaaag ccgcgctctc gtcgcgcctg attgatttcg caacgacatc
      541 ctcgggccgc aacgggcaaa gatcggggcg gaaccggttc cggttccgcg ccagcgcacc
      601 cctttcgggg ctaaagggat tcgccgtcgc cctcaggaat cgtcgtccga gtcgtggcca
      661 tcgctggtgt ggcccgcctc gttctgatcc gactccccat cgtggctttc gtggtcattc
      721 gtctcgttgt cgtccgaatg accgctcgtg ccatcgtggt cgccggtctc gttgtcctgg
      781 tccgagtcgt ggccactccc ggtcgcgttg tcgcagtcgc tgtcgtggtg gccatggtct
      841 tgatctcggc acgttccctg gtcggtaggc ggcggctgag tggtcggggt ccccggctcg
      901 ctggtgctcg tggtggtcgg cgttgccgac ggccggagca tgtaggcgat cagggcggtg
      961 gccaagacga cggccaaggt cacgcccacg attttcttca gccctgccat gtgttcgctt
     1021 ccttttcgtg ttgcgtcgca tggcggttga tggcgcggag aaggatcagc ggagcccgcg
     1081 aggcggtctc ctttcccatc ccttcgtgcg cgcacctcat ccgcacgcag tcgccggagg
     1141 ccggaccatc ctagataact cttcccgcgt cggacatcga gcgttgacaa tccgttcgcg
     1201 cgggcatgga actcgatact tgccgcgtcc gacacacgcg accatcttga caaagaaacg
     1261 tcgcgcccgt aatcgcgcca agaatcggcg agagtcggcg acaaggcaga ccgcgcagtc
     1321 ggaaggttcc ctgagaaata cggccggggc cgctctgacc ccgcgccacg atcccccgcg
     1381 agggggtaag gggttttcag tcccgcgacg tgtctagaaa atcgacacaa agtcttcgag
     1441 cgactgcagc gcagtgcatg cggcccggtc gtagaaccgg taccagttcg ccccatggac
     1501 ccgagcttgg tcgggaatgt ggtcgttctc gtgcacgcac ttgtcatgct tcggtccgtt
     1561 gctcgctttc gcgggaggcg ttggcggggt gctcggcgtc gtgccgctcc ccggatttcc
     1621 gttgtccgtg cccggctggt tcacggcgac gctcgagttt gtcgcccgcg gccggaacgt
     1681 gtaggcggcg aacgccgccc ccacgatcac ggcgatgagc acggccaccg ctgtctttcg
     1741 tcgtatcatg tttcgcctct ccttttctcc ttcgcgtgtc gtgttgcgca ggtcgcgatg
     1801 tcgcggcgag aggatcgttt tccgggagcc cgcggagcgg tctcccttcc catcccttcg
     1861 tgcgcgcatc cctttccgca cgcagctcac aggacgccct cgcatcgtag ataatgcttc
     1921 tcgcgtcgga cgccgcgagt tgacaacgtc ccttgcgcgc gcgcgtggcg cgtcaagtaa
     1981 actgcgtcgg acgcgcgcag tccgcttgac aaagggccag ggtgaaatag cgtgagcggc
     2041 catcccgcac cccgatggcg aagatggtgg acatcgggaa gaagccggat gtgcgccgcc
     2101 gggcggtggc gaccgggttg attcgtctca ggccagcgac gattcgcgcg attcgtgcgc
     2161 aacatgtcga aaaaggtgac ccgctttcga ccgccgaggt tgcggctctt caggcgatga
     2221 aagcggtgtg gcaggtactc ccgcacaccc atccaatccc gattaccgcc ggaagcgtca
     2281 cattcgacgt gggaccggac cggatctccg cgacgacgac ggtcgaagcg acgtacaaga
     2341 ctggcgtgga gatggaggcg ctctacagtg tcacggtggc cctgctgacg atctgggaca
     2401 tggtcaaagg cctggagaag aactcggacg gccaatatcc aagtgcggcc atcgaaacgg
     2461 tccgggtcgt ctccaaagag aagcagaggc ccacggtccg ccgctccgcc aatcgccgct
     2521 gaacgactgc ctcgtcgaag agtctaaggg cctcgggcca atgtcagggt ggggaggaac
     2581 gtatggcgga tgaacgaaag atttcgatgg cggaagtgcg caagacagtt gccgcatcgc
     2641 tggcggcggc gttcggcttc gtgattg
//
LOCUS       DATLMA010000338         1962 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_759448, whole genome shotgun sequence.
ACCESSION   DATLMA010000338 DATLMA010000000
VERSION     DATLMA010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759448"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VNA10_04320"
     CDS             complement(<1..444)
                     /locus_tag="VNA10_04320"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HVG36934.1"
                     /translation="MPTLEVRGLKKSIDGHGVLKDVSFGMQDGELAAILGPSGGGKTT
                     LFRCILGELTPEAGKILIDGQEVGGLPTERRGIGIVYQTFALFPHLSVAVNIGYGLRA
                     RRFAEDLARSRIAEMIDLVHLGGKENRLPRQLSGGEKQRVALARAL"
     gene            588..938
                     /locus_tag="VNA10_04325"
     CDS             588..938
                     /locus_tag="VNA10_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018888485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HVG36935.1"
                     /translation="MSYSEAQASRVRKALAGHKEIIEKELFGGIAFLLGGNMCVGVHG
                     DDLIVRIEPSTTAAMLKEPGAKPFDLAGRPGMAGWLLVAPAGYRTEAALETWVSRGVG
                     FASSLPRKPSGRKR"
     gene            1045..1941
                     /locus_tag="VNA10_04330"
     CDS             1045..1941
                     /locus_tag="VNA10_04330"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HVG36936.1"
                     /translation="MLETILAELRRELLTRAPLDALPPSVWRRTGALNTWGTNAIEGN
                     TLSRKDVERILLEGRSVANRPLPDVLETIQHEQAFESLLERRADPIGLSAVLDLHATV
                     FRGIKPDVGQWRRMNVRIAGARHVPPRMEKVVALMSDWEESYTKHDMEGAEVFPLGAW
                     MHFEFESIHPFSDGNGRVGRLLLNLHFLKHNWPPVHILPPDRSRYLRTLNSGHSGDLT
                     ELEALLTTAMGRSLLDLLDQVGTAEDALKPLRKIATRGPYSAKYLGLRAGQEKLPAIK
                     IAGDWNTSPRALRLYRERIDRS"
BASE COUNT          377 a          607 c          624 g          354 t
ORIGIN      
        1 gagggcgcgg gcgagggcga cccgctgctt ctcgccgccg gaaagctggc gcggcagccg
       61 attctccttc cccccaaggt gcaccaggtc gatcatttcc gcgatgcggc tccgcgcgag
      121 atcctcggca aaccggcgag cccgcaagcc gtagccaatg ttgaccgcga cggagaggtg
      181 cggaaacagg gcgaaggtct ggtagacgat tccgatcccc cggcgctccg tggggagccc
      241 gcccacctcc tggccgtcga tgaggatctt ccccgcctcg ggcgtcagtt caccgaggat
      301 gcatcggaac agcgtggtct tcccgccgcc cgagggaccc agaatcgcag ccaattcgcc
      361 gtcttgcatt ccgaaagaaa cgtccttcag aaccccgtgg ccgtcgatgg acttcttgag
      421 ccctcggacc tcgagggtcg gcattccacc gggttgaagg gggtgggggt agaaataccc
      481 gcggaattcc ggaaaggcgt gctgagcgag aagccaaaac tctgcggggt caccgtccgc
      541 cccgggtcat ggtttttgaa ccggggaggg ttctcctcgc ggcgaccatg agttactcgg
      601 aagcccaggc gtcgcgtgtc cgaaaggcgc tcgcgggcca caaagaaatc atcgagaagg
      661 aactgttcgg cggtatcgcc ttcctcctcg gcggcaacat gtgcgtcggc gttcacgggg
      721 acgatctcat cgtgcggatc gaaccgtcca ccaccgcggc gatgctgaag gagccgggcg
      781 caaaaccgtt cgacctcgcg ggccgcccgg gcatggcggg ttggctcctc gtggcgccgg
      841 cgggataccg gacggaggcc gcgctcgaga cttgggtgtc acgcggggtc ggattcgcct
      901 cgtcgctccc gaggaaaccg tcaggccgga agcggtaatg tgcggctctg aaccgcgcaa
      961 tccttcgcga tagtatggtt aatccgattg aatggtttaa taaccataca tctttaagta
     1021 ccatatatgg gatatgagca cggaatgctc gaaaccatac tggcggagct caggcgtgaa
     1081 ttgctcactc gggctccgct ggatgcgctg ccccctagcg tctggcgacg cacgggagcg
     1141 cttaacactt ggggaacgaa tgcgatcgag gggaacaccc tcagtcgtaa ggatgtcgaa
     1201 cggatccttc tggaaggaag gagcgtagct aatcgccccc tcccggatgt cctggagacg
     1261 atccagcatg agcaggcgtt cgagagcctc ctcgagcgtc gtgccgatcc gatcggtctc
     1321 tccgcggtcc tagacctcca cgcgacggta ttccgaggca tcaagccgga tgtgggtcaa
     1381 tggcggcgga tgaatgtccg gattgcaggc gccaggcatg ttcctcctag gatggaaaag
     1441 gtcgtcgccc tcatgagcga ctgggaggag tcgtacacga agcacgacat ggaaggcgcc
     1501 gaggtgtttc ctcttggagc ctggatgcac tttgagttcg aatcgatcca cccgttcagc
     1561 gatgggaatg gccgagtcgg ccgcctcctc ctgaaccttc acttcctgaa acacaactgg
     1621 cctccggtcc acatcttgcc gccggaccgg tctcgctacc ttcgcaccct caactcgggc
     1681 cactccggtg acctcaccga gctcgaagcg ttgctcacca cggcaatggg gcgttcgttg
     1741 ctcgacctgc tcgaccaggt cgggaccgca gaggacgcgc tgaagccgtt gagaaagatt
     1801 gcgacccgcg gtccgtactc cgccaaatac ctcggcctcc gcgcgggcca agaaaagctc
     1861 ccggcgatca agattgcggg agactggaac acgagcccgc gcgcgcttcg tctgtaccgc
     1921 gaacggattg accgttcgtg aggggttccg aaaattcgcg gt
//
LOCUS       DATLMA010000339         1127 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_92352, whole genome shotgun sequence.
ACCESSION   DATLMA010000339 DATLMA010000000
VERSION     DATLMA010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92352"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..560)
                     /locus_tag="VNA10_04335"
     CDS             complement(39..560)
                     /locus_tag="VNA10_04335"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG36937.1"
                     /translation="MARGAIRRATLRDLGLLVRHRRGMWKDIAQFSKADLDAADRAYR
                     HWARTQMKSNRFAGFIVDVGGKPVASGCVWIMHVQPRPNWKGTEAAYLLSMYTEPAHR
                     GRGHGARIVREAIRYAKGRGIHVMLLHASPFGEPIYQRLGFERTKEMRLFLDREKGRL
                     RTRYPRKTQRRAR"
     gene            712..>1127
                     /locus_tag="VNA10_04340"
     CDS             712..>1127
                     /locus_tag="VNA10_04340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HVG36938.1"
                     /translation="MSSEPRVLVAVSGASGVEYARRLIEILGDRADVITTKDALAVIE
                     VETGLSAKEFAAGAQSVYSDDNLAAAPASGSSLFRAVVVVPCSGTTLAKIAAGIADNL
                     VTRAAAVAMKENRKLILVPRETPVGAIALENMLKLAR"
BASE COUNT          189 a          371 c          347 g          220 t
ORIGIN      
        1 cgtatttgaa ggcttgcgtg ctctcccgga gagggccgtc atcgggcgcg ccgttgcgtt
       61 ttccgggggt aacgagtgcg tagtcgaccc ttctcccggt caaggaataa tcgcatctct
      121 ttcgttcgtt caaagccgag acgttggtaa atcggctcgc cgaacggtga cgcgtggagg
      181 agcatcacgt ggatgccccg acccttcgca tatcgaatcg cttcgcgaac gatgcgggct
      241 ccgtggcctc gacctcggtg ggcgggctcc gtgtacatcg agagaaggta tgcggcctcg
      301 gtccccttcc agttgggccg gggttggacg tgcatgatcc agacgcaacc gctcgccacg
      361 ggtttcccgc cgacgtcgac gatgaagccc gcaaaccggt tcgacttcat ctgtgtccgt
      421 gcccagtggc ggtacgcgcg atccgccgca tccaagtccg ctttggagaa ctgcgcaatg
      481 tccttccaca tcccgcggcg atggcggacg agcaaaccca agtcgcggag agttgcccga
      541 cggatcgcgc cgcgcgccat cgacgcgcgg attcggacca gggacttttc ctttccgcat
      601 ccttggctgt taaccttatt taaggttgaa tttcgagctg cagtgagatc atgacgaaat
      661 ggcgttctca tcccgcggaa tcttcatttg gactcggcgc ctctcacaag cgtgtcttcc
      721 gaaccccggg tcctggtcgc cgtctcgggc gcctccggcg tggaatacgc ccggcgcctc
      781 atcgaaatcc tcggagaccg ggccgacgtc atcaccacca aggacgcgct ggcggtcatc
      841 gaagtcgaga ccggcctctc cgcgaaggag ttcgccgccg gtgcgcaatc ggtctacagc
      901 gatgacaacc ttgcggcggc gcccgcgtcc ggctcgtctc tcttccgcgc ggttgtcgtc
      961 gtcccgtgca gcggcaccac gctcgccaag atcgcggccg gcatcgcgga caacctcgtc
     1021 acccgggccg ccgccgtggc gatgaaggag aatcggaaac tgattcttgt cccccgcgag
     1081 accccggtcg gcgcgatcgc gctggagaac atgctgaagc tcgcccg
//
LOCUS       DATLMA010000340         1275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_153594, whole genome shotgun sequence.
ACCESSION   DATLMA010000340 DATLMA010000000
VERSION     DATLMA010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153594"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VNA10_04345"
     CDS             <1..321
                     /locus_tag="VNA10_04345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HVG36939.1"
                     /translation="IAADEVVMDWSSTIDDPAVQSELRIVLSSAISELPVHYRAVIVM
                     RDIEGLSMAEIADGLGLTVATAKTRVHRARLLLRSRLNIFMTSRVRRPIKNAPCPHDC
                     SLSE"
     gene            565..>1275
                     /locus_tag="VNA10_04350"
     CDS             565..>1275
                     /locus_tag="VNA10_04350"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HVG36940.1"
                     /translation="MRTISGEILTDKLVETLMRTAIQHADVERGVLIVRRAEEARVEA
                     EATMRRGAIVVRRLDTLPERSDLPDTVVRYVLRTHETVLLDDASSPNPFSTDPHVAEH
                     RVRSLLCLPLVNRGTLIGALYFEDRAASHVFTASRIGILRLLASQAAIALENARLYAQ
                     LRSENSLLREELHKTSTFELRRTIDAIPHGITVLGPDGSTLGANTFMLDYTGLSLEEV
                     TDEDSRVRRFHPDDVARLE"
BASE COUNT          242 a          406 c          388 g          239 t
ORIGIN      
        1 atcgcggcgg atgaggttgt catggattgg tcgtcgacca tcgatgaccc ggcagtgcaa
       61 tcagagcttc ggattgtgct gagctcagcg atctcggagc ttcccgttca ctatcgggcc
      121 gtaatcgtca tgcgtgacat cgaggggttg tcgatggccg agatcgcgga cggcctgggc
      181 ctgacggtgg cgacggcgaa aacccgcgtg caccgggctc gcctccttct gcgctcccgt
      241 ctcaatatct tcatgacgtc ccgcgtcagg cggcctatca agaacgcccc atgtccgcat
      301 gattgctcgc tttccgagtg aacaacacga acacgaagtc tttaccaaaa gactaccgag
      361 cgatcacgat tcgggctggc gtggatcgta catttgcccg caagaggtgt tgcgatgacg
      421 accgcgttat cgactaggga cttcgaggtg ttctccaacc actccgaatt cgtcctcgcg
      481 aatgtcaggc atcagccaga caggcaggcg ccggcgggag ggcccgcagc aacaggactc
      541 gacgcggcga cggtgatcca ggctttgcgt accatctccg gcgaaatcct gaccgacaag
      601 ctcgtcgaga cgctgatgcg gaccgcgatc cagcacgccg atgtcgagcg aggggttctc
      661 atcgttcggc gagccgaaga agcacgggtc gaggcggagg cgacgatgcg gcggggcgcc
      721 atcgtggtgc gacgcctcga cacgctccct gagcgatcgg atctgcccga tacggtcgtg
      781 agatacgtgc tacgaacgca cgaaaccgtc cttctggacg atgcgagcag cccgaaccca
      841 ttctccaccg accctcacgt ggccgagcac cgcgtgcgct cattgctgtg cttgcccctc
      901 gtcaatcggg gaacgctcat cggcgcactc tatttcgagg accgcgcggc ttcccatgta
      961 ttcacggcgt cccgtatcgg gattctcagg ctgctggcgt cgcaggccgc cattgctcta
     1021 gagaacgcgc gtctctacgc gcagctccgg agcgagaaca gcctcctccg tgaggagctc
     1081 cacaagacct ccacgttcga gctgcggcgc actatcgacg ccattccgca cggcatcacc
     1141 gtcttgggcc cggacggaag tactctcggc gcgaatacct tcatgctcga ctacacgggg
     1201 ctcagcctcg aagaggtgac cgacgaagac tctcgcgtcc ggcgtttcca tccggatgat
     1261 gtggcgaggc tcgag
//
LOCUS       DATLMA010000341         1839 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_759609, whole genome shotgun sequence.
ACCESSION   DATLMA010000341 DATLMA010000000
VERSION     DATLMA010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759609"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VNA10_04355"
     CDS             complement(<1..746)
                     /locus_tag="VNA10_04355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36941.1"
                     /translation="MIPDTGARPRSPFPFVGLAAVVLLIHAILVALVPANPYRAAFSF
                     AALFAVGYSTLALIVGDSFRLTAAEILAFSTGLTIFVTSLSALGVSLLGIPITVFAVV
                     IVGLPIAILASFARRSGGGTLAAITSFSRGLLDLAGYSRFEKGIVAALLGGITAALIV
                     FVALALVHFPDSLSPGIAIYGWDGTSGSLNQTFLQGQPQEIVVSAFSGSTTAGAFMVQ
                     IRLVPQNATGNESYHTAVLTAPPLRLDAFA"
BASE COUNT          428 a          531 c          601 g          279 t
ORIGIN      
        1 tccgcgaagg cgtccaacct caaggggggg gccgttagga ccgcggtgtg gtatgattcg
       61 tttcccgttg cattttgagg gaccaggcga atctgaacca tgaaggcgcc cgccgtcgtc
      121 gaaccgctga acgcggagac gacaatttcc tgtggctggc cttggagaaa cgtctggtta
      181 aggctcccac tggtcccgtc ccaaccgtag attgcgattc ctggagagag gctgtccgga
      241 aagtgcacca acgcgagggc gacgaagacg atcagggccg ccgtaatccc gccgaggagg
      301 gcagctacaa tccctttttc gaacctcgag tagccggcaa gatcaaggag ccccctcgaa
      361 aaggaggtga tcgcggccag cgtccctcca cccgagcgac gagcaaacga agcgaggatg
      421 gcgatgggca atccgacgat gacgacggcg aagaccgtga tcggaatccc gaggagggag
      481 acgccgagag cggacaacga ggtgacaaag atggtaagcc ccgtggagaa ggcgaggatc
      541 tccgccgcgg tcaagcgaaa cgaatcgccg acaatgagag cgagagtgga ataccccacc
      601 gcgaacaaag ctgcaaacga gaaggccgcg cgatacgggt tcgcggggac caaggccacg
      661 aggatggcgt gtattaggag gacgaccgcg gcgagcccaa caaatgggaa cggcgatctc
      721 ggacgcgctc cggtatcggg gatcatccag cgattctcca gaaaggaaaa gtccgcagac
      781 tcaagaacct tcgggaacgt cgcgcagcaa gactacctct ccgagagaga cacgaaagtc
      841 cgcgcgaccg ccttccagtc tggagtcgtc cgaatccatt cctcgtttct gcgccgaatc
      901 ccgtcgagcg cgtctttttc gaagacctcc tgaatgcgcg ttgcgaggtt ggacggatct
      961 cgaggttctg caaacacgag accggtgcgg ccctccaact cgcgaatcgg atgaacgcgg
     1021 gtcgtcacga ccggcaatcc ggtcgcgacc gcctcgagcg caaccagcgg taagcctgtg
     1081 cggacgaacc ggtacgggaa aacggcgacg tcagaggccc gataggcggc ccgcagttcc
     1141 tgtcgggaga ggagcccgcg gacgacgagt agctcgtgcg aaccgattcg agtccgctcg
     1201 acgcgcggat cagaaaatct tcggtcacgt agcaacagga ctacttgggt cggtggatcc
     1261 ctcggaagaa aatgggcgag gcggagcatg tcgtcgacgc cgcgagatcc ctcgggaggc
     1321 cctgtgaaga ccacgcgtcg gccagcagga cccaagattc ccgagagtgg cggtgacaaa
     1381 tttggcggtc ctcgctcgag gaaaaatgga tcgaagggat ggcggacgac cgtacacgac
     1441 gaaggaggca ggcctgcggt cgtggcggag tcccgatcgc tttcccacag gaacacgaaa
     1501 ttgttaacaa acgccgaggc gccgggccac gtgccgagaa gccgcgagac gtacaacgcg
     1561 gcgtggtgcc tgtcgtgagg aatctccgcc gccatcgttg gatcaagaaa tcgtcgcgcc
     1621 aggtccgccc cgctatggag agggcggaga aagattccca tcagccgccc gcggaaggag
     1681 gcctcgcgtg gaacatgacg catcgagaag aacaggcctg cagtcaagcg gcacacgccg
     1741 atgtcaaatc gctccgtttc gaggacccga tgaagtgcca cggcggatcg atagtcggtc
     1801 gggtttcgat gccatttgac cggcacttcg ttccatttc
//
LOCUS       DATLMA010000342         1081 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_635356, whole genome shotgun sequence.
ACCESSION   DATLMA010000342 DATLMA010000000
VERSION     DATLMA010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635356"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1081)
                     /locus_tag="VNA10_04360"
     CDS             complement(<1..>1081)
                     /locus_tag="VNA10_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36942.1"
                     /translation="FVNGEDWKEAFAYLVQSGDKAQYAYANQAALDYYQHALEAAQRV
                     TPPVAPAHVFTIYQSRSQVFMVLARYLDAVEESKKMLELARAVGDRANEGQALVDISR
                     SYFFSFRSEFADEARRCAEDARVIAEEIGDGRLLAASLGSLGSMDQAEGDLEEGDRKF
                     HEAVRISEEKGFPAVGLQSRMFLGAHANWRAEFRRAIAVSREAEKTSVEVHDGVTELM
                     AMAFRCLSEIALGDYADGLATINAGLLKAKERNNSFIQGRLTNSLGWLRQELGDFGSA
                     IELDRESVDIGKRIKNPNVEISALINLGYDHMNLGDVGSALPLLEETTVRVEKFAFGA
                     HRWRWSIHLRVYLAEALLAVGRPEEA"
BASE COUNT          175 a          379 c          332 g          195 t
ORIGIN      
        1 ggcctcctcg ggacgaccga ccgcgaggag cgcctctgcg aggtagaccc ggagatgaat
       61 cgaccaccgc cagcgatggg ccccgaacgc gaacttctcg acgcgaaccg tcgtctcctc
      121 caggagtggc agcgcgctac cgacgtcgcc cagattcatg tggtcgtagc cgaggttgat
      181 tagcgcgctg atctcgacgt tcgggttctt gatgcgcttc ccgatgtcga cgctctcgcg
      241 gtccagctcg atcgcgcttc cgaagtcccc gagctcctga cggagccacc cgagactgtt
      301 cgtcaatcgg ccctgaatga agctgttgtt ccgctccttg gccttcagga gcccggcgtt
      361 gatggtcgcc aggccgtccg catagtcgcc gagcgcgatc tcggataggc agcggaacgc
      421 catcgccatc agctcggtca cgccatcgtg cacctcgacc gaggtctttt cggcttcccg
      481 cgagaccgcg atcgcgcgcc ggaactcggc gcgccagttc gcgtgggccc ccaggaacat
      541 ccggctctgc aggcccacag cagggaatcc cttctcctcg ctgatccgca ccgcctcatg
      601 aaacttgcgg tccccttcct ccaggtcgcc ctcggcctgg tccatcgatc cgagcgatcc
      661 caggctcgcg gcgaggagac ggccgtcgcc gatctcctcg gcgatgacgc gcgcgtcctc
      721 ggcgcaccgc cgcgcttcgt cggcgaactc cgagcgaaag gagaagaagt aggagcgtga
      781 gatgtcgacc agcgcctgac cctcgttcgc acggtccccg acggcccggg ccagctcgag
      841 catcttcttc gactcctcga ccgcgtcgag gtatcgggcg agcaccatga acacctgact
      901 ccggctctgg taaatcgtga agacgtgcgc cggagcaacg ggaggcgtca cccgctgcgc
      961 ggcctcaagc gcgtgttggt agtagtcgag cgcggcctgg ttggcgtacg cgtactgcgc
     1021 tttgtcgccc gattgcacca ggtacgcgaa cgcttctttc caatcctcgc cgttgacgaa
     1081 g
//
LOCUS       DATLMA010000343         1200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_34344, whole genome shotgun sequence.
ACCESSION   DATLMA010000343 DATLMA010000000
VERSION     DATLMA010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34344"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VNA10_04365"
     CDS             complement(<1..521)
                     /locus_tag="VNA10_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36943.1"
                     /translation="MTAVFEKMPSLRCREITQEESLQSFDQADVRRIREHDLDFLLQF
                     GFGFLRGDVLNAARYGVWSFRHSAELPYPGVTPCIWPIFYGDLVTAAVLERLTDRRDG
                     GIVLRSGSFRTALHSLRQNIDDVCFGSASWPAIVCREIQLGRATYLDMPKSSAPTTEP
                     RSLSNGETLRLLLR"
     gene            878..>1200
                     /locus_tag="VNA10_04370"
     CDS             878..>1200
                     /locus_tag="VNA10_04370"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG36944.1"
                     /translation="METLRIAIITETLPPAELNLQPWRYLGDLARALQAEGHETSVMT
                     SELGAQRWNEVPVRWHRNPTDYRSAVALRRVLETERFDVGVCRLTAGLFFSMRRVPRE
                     AAFRGR"
BASE COUNT          237 a          361 c          403 g          199 t
ORIGIN      
        1 cggagaagca ggcgcagggt ctcaccgttt gaaagagacc gcggctcggt cgtgggtgcc
       61 gacgacttcg gcatatcaag gtacgtcgcg cggcccaact ggatttctcg gcagacgatc
      121 gcaggccacg aggccgatcc gaaacacacg tcgtcgatgt tctgccgcag agagtggagc
      181 gccgttcgga aggacccgct gcggaggacg atgccgccgt ctcgtcgatc ggtcagccgt
      241 tccaggactg cggctgtgac taggtcgccg tagaagatgg gccagatgca tggggtgaca
      301 cccggatacg ggagttcggc ggaatgacgg aatgaccaga cgccgtaccg cgcggcgttc
      361 aacacgtctc ccctgaggaa gccgaacccg aactggagaa gaaagtccag atcatgttcc
      421 cggatgcggc ggacgtcggc ttggtcgaag gattgcaacg actcttcctg ggtgatctcg
      481 cggcaccgca gcgaaggcat cttctcgaag accgcggtca tgtccaccag ccgcagcgcc
      541 ttcggaggac ggagtcccaa gtatgcgcga aagaggagcg gcgccgccgg aaccggatga
      601 gagaccggat ggtccgaggg tgacgcctca ggaaaaatca gcaccgcagg ggtgactccc
      661 gggaccctca aaagcgcctc gacagatcgc gcctgccacg ctgcgagcgt cgggctgtcg
      721 cacagaatcc cgaaccgaac cgggcgggga gggatcgtgg tgagagcacc ctcggacatt
      781 cttgttagac acggtcccga gattatttag cctattcagg cgaatcccaa ccgcgcccgg
      841 cttccgatgc gggccgggtc agagcgtggg ctgattcttg gaaacccttc ggatcgcgat
      901 catcaccgag acgctcccgc ctgcggagtt gaaccttcaa ccgtggaggt acctcggcga
      961 tctggcccgg gcgctccagg ccgagggcca cgagacatcg gtcatgacga gcgaattggg
     1021 tgcgcagaga tggaacgagg tgccggtccg gtggcatcga aacccgaccg attatcgatc
     1081 cgccgtggca cttcgtcggg tcctcgagac cgaacgattt gacgtcggcg tgtgccgcct
     1141 gacggcaggc ctgttcttct cgatgcgtcg tgttccacgc gaggccgcct ttcgcgggcg
//
LOCUS       DATLMA010000344         2887 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_34364, whole genome shotgun sequence.
ACCESSION   DATLMA010000344 DATLMA010000000
VERSION     DATLMA010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34364"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1089
                     /locus_tag="VNA10_04375"
     CDS             <1..1089
                     /locus_tag="VNA10_04375"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HVG36945.1"
                     /translation="PDKMSREKIDLLKALGARVVVTPTAVPPEHPDSYYRVAERIHRD
                     TPNSILPNQYANQANPRAHYETTGPEIWRDTDGTVTHFVCGMGTGGTISGVGKFLKEK
                     NPKVRVIGVDPLGSILKDFFYKKEPMKAHTYKIEGIGEDFVPESTWFDTIDEIVKVGD
                     KEAYLMTRRLAREEGVLAGSSSGAAVVAARRIAETLDRDDVMVVLLPDTGERYLSKAH
                     SEEWLKEQGYLEEPVAPLMTILRAKERTIPGVVTIDIAAKVREAADMMRQYNVSQLPV
                     MDTGILVGSLREEILMKALLENPKLYDDYVAKVMDKPFPVVEPGADLEQVYKLLMRGN
                     PAVVVGKENRLEGIITRIDVIEYLAGRA"
     gene            1135..2259
                     /locus_tag="VNA10_04380"
     CDS             1135..2259
                     /locus_tag="VNA10_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007656192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HVG36946.1"
                     /translation="MRFATKAIHVGQEPDPRTGAVTAPLYLTSTYSRKTQDEYAYARS
                     SNPTREALQKSLAGLEEAKYALSFSSGMGAITTSLTLLKKGDHVVVTDDCYGGVYRIF
                     TRIMSNYGIESSFVDLRDLVDAEDAFRPETRMLWTESPTNPLMKVVDLRELAVIAKAH
                     DAISVCDNTFASPALQNPLALGIDLVVHSTTKYLGGHADLLGGALVMNRDDLHEKLKF
                     SQNALGAIPSAFDCWLTLRGIKTLAVRMERHCDNAEALAKFLKGHKAIAKVHYPGLPD
                     DPGHAIAKKQMRRFGGMLSFEARDPSRIVERLKRLEVIVPAESLGGVESLIEHPASMT
                     HASVPKDQREKQGITDGLVRFSIGIEDVHDLTEDLERALG"
     gene            complement(2227..>2887)
                     /locus_tag="VNA10_04385"
     CDS             complement(2227..>2887)
                     /locus_tag="VNA10_04385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36947.1"
                     /translation="LFGSSLALGRWIVSPPGFELIYGDVLLAWIGVVIYVSAWPNLWA
                     GLRDLQARQPQDPNGVVAWRAFSLTLLLGVATVVVLLLQCRALASADAWIFIMSWSVV
                     RLAGWSLVPILALHGIIFGRVARSLKPPFQYVTDLGAFVLFAVAAATTVIIVESPGAT
                     ALVHAWSLGLGVLPAGAAAGYGLIAFGMTGHSATVKSRIPTTHARLLGSSAERPFEVF
                     R"
BASE COUNT          603 a          917 c          952 g          415 t
ORIGIN      
        1 ccggacaaga tgagccggga gaagatcgac ctcctgaagg ccctcggggc ccgggtcgtc
       61 gtgacgccca cggcggtccc gccggagcac ccggattcct attaccgggt cgccgagcga
      121 atccatcggg acacgccaaa ctcgatcttg cccaaccagt acgcgaacca ggcgaatccc
      181 cgggcccact acgagacgac gggcccggaa atctggcggg acacggacgg gaccgtcacc
      241 cacttcgtct gcgggatggg gacgggcggc acgatcagcg gcgtgggcaa gttcctgaag
      301 gagaagaatc cgaaggtccg ggtcatcggg gtcgacccgc taggatcgat cttgaaggat
      361 ttcttctaca agaaggaacc catgaaagcc cacacctaca agatcgaagg aatcggggag
      421 gacttcgtgc cggagtcgac ctggttcgac acgatcgacg agatcgtcaa ggtgggcgac
      481 aaggaggcgt acctgatgac gcgccgcctc gcccgggagg aaggcgtcct cgcggggagc
      541 tcgagcggcg ccgccgtcgt cgcggcccgg cggattgcgg agacgctcga tcgggacgac
      601 gtgatggtcg tcctcttgcc ggacaccggc gagcgctacc tctcgaaggc acacagcgag
      661 gaatggttga aggagcaagg ctacctcgag gaaccggtcg cgcccctcat gacgatcctc
      721 cgggcgaagg agcgaacgat tcccggcgtc gtcacgatcg acatcgcggc gaaggtccgg
      781 gaggccgccg acatgatgcg ccagtacaac gtgtcccagc tccctgtcat ggacacgggg
      841 atcctcgtcg gcagcctgcg ggaggaaatc ctgatgaagg ccctcctgga gaacccgaag
      901 ctctacgacg attacgtcgc caaggtgatg gacaaaccgt tccccgtcgt cgagccgggt
      961 gcggacctcg agcaggtcta caagctcttg atgcgcggca atcccgccgt cgtcgttgga
     1021 aaggagaacc gactcgaagg gatcatcacc cgcatcgacg tcatcgagta cctcgcgggc
     1081 cgcgcgtagc aagcttattt acggcgggcg tgcgactccg tccccggcga ttccatgcgc
     1141 tttgccacga aggccatcca cgtcgggcag gaaccggatc cgcggacggg cgcggtgacc
     1201 gcgccgctct acctgacctc gacgtattcc cggaagacgc aggacgagta tgcgtacgcg
     1261 cgttcctcga acccgacgcg ggaggccctg cagaagagcc ttgcgggcct ggaagaggcg
     1321 aagtatgcgc tctcattctc gagcggcatg ggggccatca cgacgtccct cacactcctg
     1381 aagaagggag accacgtcgt cgtgacggac gactgctacg gcggagtcta ccggatcttc
     1441 acgcgaatca tgagcaacta cgggatcgaa tcgagcttcg tcgacctgcg cgacctcgtc
     1501 gacgccgagg acgccttccg gccggagacc cggatgctgt ggaccgaatc gccgacgaac
     1561 cctttgatga aggtcgtcga ccttcgtgag ctcgcggtca tcgcgaaagc gcatgatgcg
     1621 atcagcgtgt gcgacaacac attcgcctcg ccggccctgc agaatcccct ggccctcggg
     1681 atcgacttgg tcgtccacag cacgacgaag tacctgggcg gccatgcgga tctcctcggc
     1741 ggagccctcg tgatgaaccg ggacgacctc cacgagaagc tcaagttctc ccagaacgcg
     1801 ctaggcgcga tcccgagcgc cttcgattgt tggctcacgc tgcgcgggat caagacgctc
     1861 gcggtccgca tggaaaggca ctgcgacaac gcggaggcgc tcgcgaaatt cttgaaaggg
     1921 cacaaggcca tcgcgaaggt ccactacccc ggtctccccg acgaccccgg ccacgccatc
     1981 gcgaagaaac agatgcgtcg gttcggcggc atgctgagct tcgaggcccg cgatccgtcc
     2041 cggatcgtcg aacggctcaa acgcctcgag gtcatcgtgc cggccgagag cctgggcggc
     2101 gtggaatccc tgattgaaca tccggcctcg atgacccatg ccagcgtgcc gaaggatcag
     2161 cgggagaagc aaggcatcac ggatggcctg gtccgcttct cgatcggaat cgaggatgtc
     2221 cacgacctaa cggaagacct cgaacgggcg ctcggctgaa gacccgagca ggcgcgcgtg
     2281 cgtcgtcggg atccgcgact tcacggtcgc cgaatggccg gtcattccga acgcgatcag
     2341 cccgtagccg gccgccgcgc cggcgggcag caccccgagt cccaggctcc atgcgtgaac
     2401 gagggcggtg gccccggggc tctcgacgat gatcacggtc gttgcggcgg caacggcgaa
     2461 caggacgaac gctccgaggt ccgtgacata ttggaagggc ggtttgaggg aacgagcgac
     2521 gcggccaaag ataattccat ggagcgcgag gattggcaca agcgaccagc cggcgaggcg
     2581 cacgacggac cacgacatga tgaagatcca cgcatccgcc gatgcgagcg cacgacactg
     2641 gaggagaagg acgacgaccg tcgcgacccc gaggaggagc gtgagcgaga acgctcgcca
     2701 tgcaacgacg ccgttcggat cctgaggctg ccgggcctgg aggtcacgca acccggccca
     2761 gaggttcggc caggccgaaa cgtaaatgac caccccgatc cacgcgagga ggacgtcccc
     2821 gtagatgagc tcgaaacccg gaggggaaac gatccatcga ccgagggcga gcgaagagcc
     2881 gaagagg
//
LOCUS       DATLMA010000345         1316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_154248, whole genome shotgun sequence.
ACCESSION   DATLMA010000345 DATLMA010000000
VERSION     DATLMA010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154248"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..>1316
                     /locus_tag="VNA10_04390"
     CDS             141..>1316
                     /locus_tag="VNA10_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015491608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HVG36948.1"
                     /translation="MSELGEAGARRIEWAREHMPVLAAIREELKTKKTLRGLRIGMAL
                     HVEAKTGVLALSLREAGATVRLASCNPLSTDDSVATALAEKHGLDVYAKKWQTNDEYY
                     ANLNKVLDLKPDLVIDDGADLVKLLHTKRRELLDGVRGANEETTTGIIRLRAMERDGA
                     LRFPVIDVNDAQMKHLFDNRYGTGQSTFDGLMNATNLLIAGKTFVVAGYGWTGRGIAM
                     RADGMGARVIVTEVDPVKAIEASMDGFEVLPMRSAVREADFIVSATGCKDIVTAAHFP
                     AMKDGVVLANAGHFDNEISKGDLQKAAKAKRRVREFVDEYTLTGGKRAYLVAEGRLVN
                     IAAGQGHPVEIMDMSFAIQAVSAGYLAQNAGRLQPRLYPVPPALDMKVARLKLRSMGV
                     "
BASE COUNT          266 a          394 c          449 g          207 t
ORIGIN      
        1 acgtccactt gtcctggccg atcgacgctt tgttctatgg catcatggcc gccggagtcg
       61 tggtgctcgg agtcgctgcg ttccgaaagc gctgaggata ccggaaggct gaaatcgact
      121 cgcaggcatc ggcgcacgcg atgtcggagc tgggtgaggc cggggcgcgt cggatcgaat
      181 gggcccggga gcacatgccc gtcctcgcgg cgatccgcga ggagctcaag acgaagaaaa
      241 cgctccgagg tctccggatc gggatggcgc ttcacgtcga agcgaagacc ggggtcctcg
      301 ccctgtcttt gcgggaggcg ggcgcgaccg ttcgcctggc gtcgtgcaat ccgctgtcca
      361 ccgacgacag tgtcgccacg gccctcgccg agaagcacgg tctcgacgtc tacgcgaaga
      421 agtggcagac caacgacgag tactatgcga acctcaacaa ggtcctcgac ctgaagccgg
      481 acctcgtcat cgacgacggc gcggacctcg tcaaactgct gcacacgaaa cggcgggaac
      541 tcctggacgg tgtccgggga gcgaacgaag agacgacgac gggcatcatc cggctacgag
      601 cgatggaacg agacggagcg cttcggttcc ccgtcatcga cgtgaatgac gctcaaatga
      661 agcacctctt cgacaaccgg tacgggacgg gccagagcac gttcgacggg ctgatgaacg
      721 cgacgaacct cctgatcgcc ggtaagacct tcgtcgtggc gggatacgga tggacgggtc
      781 gcgggatcgc gatgcgggcc gacgggatgg gagctcgggt catcgtcacc gaggtcgatc
      841 cggtgaaagc gatcgaggcc tccatggacg gattcgaggt ccttccgatg cgaagcgcgg
      901 tgcgggaggc ggacttcatc gtctccgcga ccggctgcaa ggatatcgtg accgccgcgc
      961 acttccccgc gatgaaagac ggcgtcgtgc tcgcgaacgc gggccacttc gacaatgaga
     1021 tttcgaaagg cgatctgcag aaagccgcca aggccaagag gcgagtccgg gaattcgtcg
     1081 acgagtacac gctcaccgga ggcaagcggg cctacttggt cgccgaagga cggctggtga
     1141 acatcgcggc gggccaaggc catccggtgg aaatcatgga catgagcttc gcaatccagg
     1201 cggtctcggc aggctatctg gcgcagaacg cgggccggct ccagccgaga ttgtaccccg
     1261 tcccgccggc tcttgacatg aaagtcgccc ggttgaagct acgcagcatg ggggtc
//
LOCUS       DATLMA010000346         2487 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_877613, whole genome shotgun sequence.
ACCESSION   DATLMA010000346 DATLMA010000000
VERSION     DATLMA010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877613"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VNA10_04395"
     CDS             <1..449
                     /locus_tag="VNA10_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36949.1"
                     /translation="DKIRAQADEMQSEVNKNLRFLQKKALDVLDQEEKIRARVAASEG
                     QEKSLDTQAEILEGKERALEADQAALDSKVAKLQAEIDRLRGNIADAEKSGGPTTAAM
                     EEWKKDVENRVKIIQKKAMDLLDREEKLRKKEEELRALASQLGVKP"
     gene            complement(493..1674)
                     /locus_tag="VNA10_04400"
     CDS             complement(493..1674)
                     /locus_tag="VNA10_04400"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG36950.1"
                     /translation="MAKRLGPRTRAVHGRRGKRRGPIVTPIYASSTWALESAREGAEF
                     ARATAPEAYYTRWGNPTLRELEDTLADLEGGARALVTGSGMGAIASAILACVDAGDHV
                     VAGASLYAATTEIFTRLLPRFGVSTSFVDPRRAGAWSEALRSGTRLVYVETPANPTMI
                     ITDLREAVKAAQSVGATTLADNTFASPINQRPLELGIDAALHSATKYLGGHSDVVAGA
                     VVTATSRLFDRIWFTYTMLGPALGPFEAFLVRRGLKTLPIRMQAQGASAQVLAESLED
                     DAAVRVVHYPGLTSFPQHALARKQMSGFGAMLSFELKGGHRAGRRFVESVKVATLAVS
                     LGGTETLVQHPASMTHGPLTESERKTSGITEGLVRVSVGLEDTDDLMEDFAQAIRKAV
                     R"
     gene            1866..2291
                     /locus_tag="VNA10_04405"
     CDS             1866..2291
                     /locus_tag="VNA10_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020266910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HVG36951.1"
                     /translation="MSREVDFAAKPIDPDFMNKPDEYPETGTHFDHKVYADGVERLDA
                     DGNPYPTKLGIHGLHVAVDFDGCVADGVCMDVCPVDVFEWLLAPGKKGTGNDKIIEKG
                     GEEWDKYRCDKSDMIRESDCIDCMACETACPTKVIKINP"
BASE COUNT          497 a          788 c          803 g          399 t
ORIGIN      
        1 cggacaagat ccgggctcag gctgacgaaa tgcagtcgga ggtgaacaag aacctccggt
       61 tcctccagaa gaaagccctc gacgtgttgg atcaggagga gaaaatccga gcccgcgtcg
      121 ccgcgagcga ggggcaggag aaatcgctcg acacccaggc ggaaatcctc gaagggaaag
      181 agcgggcact cgaagcggac caggccgcgc tcgactccaa ggtcgcgaag ctccaagccg
      241 agatcgatcg gctgcgcggg aacatcgccg atgcggagaa atccggaggc ccgacgacgg
      301 ctgcgatgga agagtggaag aaggacgtcg agaatcgcgt gaagatcatc cagaagaagg
      361 ccatggacct gctggaccgc gaggagaaac tccggaagaa agaggaggag ctccgcgcgc
      421 tcgccagcca gctcggcgtg aagccgtgat ccacgtcgga tgtccgagag cggacggcct
      481 cctcttcgac gtctagcgca cggccttgcg gatcgcctgg gcgaaatcct ccatcaggtc
      541 gtccgtatcc tcgaggccga cgctgacccg cacgagcccc tcggtgatgc cgctcgtctt
      601 ccgctccgac tccgtgagcg gaccgtgggt catcgaggcg gggtgctgga cgagggtctc
      661 tgtcccgccc aggctcacgg cgagcgtcgc caccttcacg gactccacga accgtcggcc
      721 cgcgcgatgg cctcccttca actcgaagct cagcatcgcg ccgaacccgg acatctgctt
      781 ccgcgcgagc gcgtgctgcg gaaacgatgt gaggccgggg taatggacga cccgcacggc
      841 cgcgtcgtct tcgagggact cggcgaggac ctgagcactc gcgccctggg cctgcatgcg
      901 gatcgggagc gtcttcaatc cgcgtcggac caagaacgcc tcgaacgggc cgagggcggg
      961 tcccaacatc gtgtaggtga accagatgcg gtcgaatagc cgggaggtcg cggtgacgac
     1021 ggcacccgcg acgacatcgc tgtgaccgcc gaggtatttc gtcgcgctat ggagggcggc
     1081 gtcgatccca agctcgagag gacgttggtt gatgggcgat gcaaacgtgt tgtccgccaa
     1141 tgtcgttgcg ccaaccgact gggcggcttt gaccgcttcc ctcaaatccg tgatgatcat
     1201 cgtggggttc gccggagtct cgacatacac caaccgcgtt ccgctccgca gcgcctcgct
     1261 ccaagccccc gctctccgcg ggtcgacgaa gctcgtcgac actccgaagc gcggcaagag
     1321 gcgggtgaaa atctccgtgg tcgcggcgta gaggctcgct ccggcgacga cgtgatctcc
     1381 ggcgtccacg cacgcgagga tcgccgacgc gatcgcgccc atcccggatc cggtcacgag
     1441 tgcacgggcg ccaccttcga gatccgcgag cgtgtcctcg agttcccgga gggtgggatt
     1501 cccccaccgc gtgtagtacg cctccggggc cgtcgccctt gcaaactccg cgccttcgcg
     1561 ggcggattcg agggcccagg tcgaactcgc gtaaatcggc gtgacgatcg gaccgcgcct
     1621 cttcccacgc cgtccgtgga ccgcgcgggt ccgaggcccg aggcgcttcg ccatggacca
     1681 cgagactgtc aggtcgccaa aataagtttt cgaagttgga aaaaacgcac atcggccgag
     1741 ggcgagacac gcgcgcatcg ctgcgatgaa tgttaaaccg gaaaggtcaa aaaggggggg
     1801 tgtataacaa ccctccgccc ggtcgttgtc tcacggccgg gcgacccgcc taaggaggca
     1861 actcgatgtc tcgtgaagtg gacttcgccg cgaaaccgat cgaccccgac ttcatgaaca
     1921 agccggacga ataccccgag accgggaccc acttcgacca caaggtatac gccgatggcg
     1981 tcgagcggct cgatgccgac gggaatccat acccgacgaa actcggaatc cacggtctcc
     2041 acgtcgccgt cgacttcgat ggctgcgtcg ccgacggcgt atgcatggac gtctgcccgg
     2101 tcgacgtgtt cgagtggctt ctcgctcccg gcaagaaggg cacgggaaac gacaagatca
     2161 tcgagaaggg cggcgaagag tgggacaaat atcgatgcga caagtccgac atgatccgag
     2221 agtcggactg catcgactgc atggcgtgcg agaccgcctg cccgacgaag gtcatcaaga
     2281 tcaacccata gccctccttc gatcgatcgt gcgacgccgg ggcgtttcct cccgttcgat
     2341 tcgacccaag gattatctat aacagcgtta tgcgagccgc gaaacgggtg cctcgttgac
     2401 cgatgtgctc tacgccgggt ttctcggtct gatcgcagga ctggtgccgg tgtacatcgg
     2461 cctggctccg ttgtggatct tcaagcg
//
LOCUS       DATLMA010000347         1859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_636090, whole genome shotgun sequence.
ACCESSION   DATLMA010000347 DATLMA010000000
VERSION     DATLMA010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636090"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VNA10_04410"
     CDS             <1..770
                     /locus_tag="VNA10_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36952.1"
                     /translation="RRRMRKVLGILTEDFRLYHDLVAALKARDLPFTSLSFARRVPDA
                     VGAILTSPAEASRVHLRNVVPVDDIDSSIAKALQLLRGKTEWAELRIGVDPGREPGVA
                     IIGDGEVIDTRIAASPEAVAFHVRQALRTFPAKDIRVRIGHGDPTNRDRILKALARDQ
                     LRVEIVDEAGTTHRTAQPDVDAAIDIAKSSGRRVEPPVEIRPTPGEVREIQRRSRLDS
                     GGVVTISSELAGAVARGDLSLEEAIARARRKEPQSQG"
     gene            complement(759..1172)
                     /locus_tag="VNA10_04415"
     CDS             complement(759..1172)
                     /locus_tag="VNA10_04415"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HVG36953.1"
                     /translation="MPEPLELIRIAGSETRRQILRLLRQGFDHPEDLAKKLKIRRTSV
                     DKQLVELFAWGLVDRAAIFPPNGRPRIVYQVTQRGKDLLDLLERVVKEYTSSFKSDFA
                     RELEALEAKLAAGEIAEEMYFKRRKELEARYSLAL"
     gene            1326..1511
                     /locus_tag="VNA10_04420"
     CDS             1326..1511
                     /locus_tag="VNA10_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36954.1"
                     /translation="MFGHKNTGLQETVLRSQAHDDAAKSTRTRQKTEAWMTKTPIEAV
                     ARKEMYFAVASTFRWSQ"
     gene            1508..>1859
                     /locus_tag="VNA10_04425"
     CDS             1508..>1859
                     /locus_tag="VNA10_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36955.1"
                     /translation="MKRKDILRKLEERLARGEINEKTYLEIKARYDSEPEEPEESEPP
                     QPAMPDLGEAIGAVVAQATAEAGRHAEHAGHVIGEAMRAVDFSGIGTQLSEESIKILG
                     SGVVSGNPIKTVEFK"
BASE COUNT          345 a          592 c          625 g          297 t
ORIGIN      
        1 ttcgtcgccg gatgcgaaag gtcctgggga tcctcacgga agacttccga ctctaccacg
       61 acctcgttgc cgcgctgaag gcgcgcgacc tcccgttcac gagtctgtcg ttcgcccgcc
      121 gcgtgccgga cgccgtcggc gcgatcctga cgtcccccgc ggaggcgagc cgcgtccacc
      181 ttcggaacgt cgtgcccgtc gacgacatcg actcgtcgat cgcgaaagcc ctccagcttt
      241 tgcgcggcaa gacggaatgg gcggagctgc ggattggcgt cgatccgggg cgggagccgg
      301 gcgtcgcgat cattggagat ggcgaggtga tcgacacgcg gattgcggcg agcccggagg
      361 cggtcgcgtt ccacgtccgc caagcgctcc gcaccttccc ggcgaaggac atccgagtgc
      421 gaatcggtca cggcgatccg acgaaccggg atcggatcct gaaggcgctc gcgagggacc
      481 agctccgtgt ggagatcgtc gacgaagcgg ggacgacgca ccgcaccgcg cagcccgacg
      541 tcgatgcggc gatcgacatt gcgaagtcct cggggcgccg ggtggaaccg cccgtcgaga
      601 ttcggcccac gcccggagag gtacgcgaga tccagcgtcg gtcgcgcctc gacagcgggg
      661 gcgtcgtcac gatctcgtcg gagctcgccg gggcggtggc ccgcggcgac ctctccctgg
      721 aggaagcgat cgcccgcgcg cggcgcaagg aaccgcagtc acagggctag tgaataccgc
      781 gcctcgagct ccttgcggcg tttgaagtac atctcctccg cgatctcgcc ggccgcgagc
      841 ttcgcctcta gcgcctcgag ttcgcgggcg aaatccgatt tgaaggacga cgtgtactcc
      901 ttcacgacgc gttcgagcag gtccaacagg tccttcccgc gttgtgtcac ctggtacacg
      961 attcgcggcc gaccgttcgg cgggaaaatc gcggcacggt ccacgagacc ccacgcgaac
     1021 agctcgacga gttgcttgtc gacggaggtc cggcggatct tcagtttctt cgcgagatcc
     1081 tccgggtgat cgaacccttg ccggagcaac cggaggattt ggcggcgcgt ctccgaaccc
     1141 gcaatccgga tcagctccag cggttccggc atcccggtcg gcgagtcgtg tcggcctact
     1201 tcaacgttct tccccttcgc atcggacgtc gtctccccag agggagatga tgtcgggacg
     1261 ccggcggaag gtatcattat tatccgcgag gtttacataa ataaaccggg tcccatcgac
     1321 tctgcatgtt cggacacaag aacaccgggc tgcaggagac ggtgctgcgt tcccaagcac
     1381 acgatgacgc ggcgaagtcg acgcggaccc gccaaaagac cgaggcgtgg atgacgaaga
     1441 cgccgatcga ggccgtcgcg cggaaggaaa tgtatttcgc tgtggcctcc actttccggt
     1501 ggagccaatg aagcggaagg acatcctccg aaagctcgag gaacggctcg cgcgcggcga
     1561 gatcaatgag aaaacgtact tggagatcaa agcccgctac gattcggaac cggaggagcc
     1621 ggaggagtca gaaccgcccc agccggcgat gccggacctc ggcgaagcga tcggggccgt
     1681 ggtcgcgcaa gcaaccgccg aggccggccg ccatgcggag cacgctggtc acgtcatcgg
     1741 cgaagcgatg cgtgcggtcg atttctcggg gatcgggacg cagctgagcg aggagtcgat
     1801 caagatcctc ggcagcggcg tcgtgagcgg gaacccgatc aagacggtcg agttcaagt
//
LOCUS       DATLMA010000348         1334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_400558, whole genome shotgun sequence.
ACCESSION   DATLMA010000348 DATLMA010000000
VERSION     DATLMA010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400558"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..831)
                     /locus_tag="VNA10_04430"
     CDS             complement(<1..831)
                     /locus_tag="VNA10_04430"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AsnC family transcriptional regulator"
                     /protein_id="HVG36956.1"
                     /translation="MDAKDFRLLVALDEDARQSFHALGRKVSLSAPAVRDRIRRLEER
                     VIVQGYWVSIVPAIFERQDLLVSFDGDWSRDEAMKALGAPDVAWVAWKVDGGVTLEIW
                     PQDVKKAVAALRRFLGRDPSWQGVASPEWSGELSSLDWRVLDVLIDDPRASIDQLSSS
                     TGLSPKTVRKHLNGLIRDEAIYVVPRLGFLKDSGEIVYHLVVAGNASFADVKRVLGDA
                     ELIHETQDTPKKYLFCRADSLGEMTSRNRALERLPGVTSVQVSLNREMMFGTEFVHRL
                     V"
     gene            929..>1334
                     /locus_tag="VNA10_04435"
     CDS             929..>1334
                     /locus_tag="VNA10_04435"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HVG36957.1"
                     /translation="MFRAVESDPQKSSRNIVVIGSTGRTGRLVLDEGLRRGHSMTAFT
                     RRPETLAGVHGLRSVVEGDGRRLEDMRRALRGQDAVISIVVSEGRGPTTVMSDVTRAE
                     LDAMREAGVRRLVSVSVSAIEGRRPWILINLVR"
BASE COUNT          242 a          416 c          428 g          248 t
ORIGIN      
        1 gacaaggcga tgaacgaact cggtcccgaa catcatttct cgattcaggg agacttgcac
       61 ggaggtcacg ccggggagac gttcgagagc gcggttcctc gatgtcatct cgccgaggct
      121 gtcggcccgg cagaacagat atttcttcgg agtgtcctgc gtctcgtgaa tcaattcggc
      181 gtcaccgagg acccgtttca cgtcggcaaa ggatgcgttc cccgcgacca caagatggta
      241 gacaatctcg ccggaatcct tgaggaaacc aagccgcggg accacgtaga tcgcttcgtc
      301 gcggatcagt ccattgagat gcttccggac cgtcttcgga ctcagcccgg tcgacgagga
      361 gagctggtcg atcgatgctc gtgggtcgtc gatcaggacg tcgagcactc tccaatccag
      421 gctcgacaat tcgccgctcc actcgggact ggccacgcct tgccagctcg ggtcgcggcc
      481 gagaaatcgc cgcagcgccg cgaccgcttt cttgacgtcc tgaggccaga tctccagtgt
      541 gaccccgcca tccaccttcc atgcgaccca ggcgacgtcc ggcgcgccga gcgccttcat
      601 ggcctcgtct cgactccaat ctccgtcgaa cgagacgagt aggtcctgcc tttcgaagat
      661 cgccggtacg atcgagaccc agtacccttg cacgattacc cgttcctcga ggcggcggat
      721 tcggtcgcgg accgcagggg ccgagaggga gaccttgcgg ccgagtgcat gaaagctctg
      781 ccgcgcatcc tcatcgagcg cgacgaggag gcggaagtct ttcgcgtcca ccgattgccg
      841 atggcggccg agttctaata ctccccgaat cgaaagtggc gcctaacgcg aacccaaatc
      901 cgtgcgagcc ggtgagcgtt tcgtgagctt gttccgtgca gtcgaatcgg atccgcagaa
      961 gtcgagtcgg aacatcgtcg tgattgggtc gacgggccgc accggccggc ttgtcctcga
     1021 tgagggcctg cgtcgcgggc attcgatgac cgcgttcacc cgccggcccg agacgcttgc
     1081 gggcgttcat ggactcagat cggtggttga gggggacggg cggcgcctgg aggacatgcg
     1141 acgcgcgttg cgcggacaag acgcggtcat ctcgattgtc gtctccgaag gccggggtcc
     1201 gacgaccgtg atgagcgacg tcacgcgcgc cgagctggac gcgatgcgcg aagccggggt
     1261 tcgacggctc gttagcgtga gcgtctcggc gatcgaaggg cgacgacctt ggattctgat
     1321 caatctcgtc cgct
//
LOCUS       DATLMA010000349         3123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_577998, whole genome shotgun sequence.
ACCESSION   DATLMA010000349 DATLMA010000000
VERSION     DATLMA010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577998"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..490)
                     /locus_tag="VNA10_04440"
     CDS             complement(194..490)
                     /locus_tag="VNA10_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit F"
                     /protein_id="HVG36958.1"
                     /translation="MELAAVGRDEFVQGFKLAGVRKTFSVGRDAVEAQVAKVLEDPNV
                     GILILSADDMTALSNTMRRRLETTPRPVVIAVGKREEEDLRAKIKRAIGVDLYK"
     gene            complement(491..1600)
                     /gene="ahaC"
                     /locus_tag="VNA10_04445"
     CDS             complement(491..1600)
                     /gene="ahaC"
                     /locus_tag="VNA10_04445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase A1 subunit C"
                     /protein_id="HVG36959.1"
                     /translation="MAAPMTPGTSSYLGQYWRRVMRYLPIESGNYPYVTARVRAKKAA
                     LLSPDVYERMLQMEIPQIARVIGEGAYKAEVLALASRASGVDLIELATSRNLAAVFTQ
                     IIGFSEGELRQMIGWYLDRFDVQNIKTIVRGKTFGASSAEILEDLVAAGSMKESFLQA
                     LVELPTLDEVFDRLEGTIYGQALAGLGKKASQVERWNEWEDRVTQLYYENLLFIVPER
                     TEGTRLMREFVRREVDIVNLKTLLRLWASKATLPYDPFMAGGLEIPTDELSEMVQMDV
                     NALTARLREYTLTEDLSSRLRDLQALGVGQLVRSVEKLHLLEAGRYAHVHPLSVLPIL
                     DYVVRKEREVQNLRIIARGKESAMDSAVIRDLLVV"
     gene            complement(1585..2142)
                     /locus_tag="VNA10_04450"
     CDS             complement(1585..2142)
                     /locus_tag="VNA10_04450"
                     /inference="COORDINATES: protein motif:HMM:NF014093.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033178 - proton-transporting two-sector
                     ATPase complex, catalytic domain [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit E family protein"
                     /protein_id="HVG36960.1"
                     /translation="MGLESVVEDVLGRGRSEVEEIRRAALAERERMLQTAQAEGAKLL
                     EVREREARQAAERLRVQALARAELESKKIVLSAEKDLLDEVYAKVLGKLAVLEDGAAI
                     LQSLLKAQAADWRTGKVYCNENDASVVRAVVGTSFDGTIDCVGGIVIESGDGTHRIDL
                     RYETLLADIWRDSIREVAEVLWPRR"
     gene            complement(2153..2377)
                     /locus_tag="VNA10_04455"
     CDS             complement(2153..2377)
                     /locus_tag="VNA10_04455"
                     /inference="COORDINATES: protein motif:HMM:NF012365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit K"
                     /protein_id="HVG36961.1"
                     /translation="MADPLAAMAAAITMAGTGIATAWTQKIVGGATVGAMAEKPELFG
                     RGLVLMALPETIVVFGLVIALQLLTKVAAP"
     gene            complement(2382..>3123)
                     /locus_tag="VNA10_04460"
     CDS             complement(2382..>3123)
                     /locus_tag="VNA10_04460"
                     /inference="COORDINATES: protein motif:HMM:NF013647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033179 - proton-transporting V-type
                     ATPase, V0 domain [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="V-type ATPase 116kDa subunit family protein"
                     /protein_id="HVG36962.1"
                     /translation="HPPPAHLEELSWESFGLFIPIPTLIHKAFGIGDMIYLSLLFAAL
                     HLGTGYMIGFVNEVHHNKRHALAKLGWFMCLFGLFTLLTFSLRWNPIARWVWNVPLGW
                     FPRVIEPLGLRGFLGVEIPFASLILILGALLGLFESVIAPIEVASLLANIMSYMRLAG
                     IGIGKAAIASAFNVILLQNLILTGQIGFIIMGVAFLILAQMLVFLLGWISAGIQALRL
                     NYMEAFIKFYKGNGIPFRPFGVRGTQEV"
BASE COUNT          544 a         1027 c          975 g          577 t
ORIGIN      
        1 gcccacgatc tggatgactt cccccagcag ctgctcctcc ccgacgaact ggacgtcgta
       61 catgcgcgga cggagacccg tggccgtgac aaccggtccc gcgactcggt agatctcccc
      121 cgacgtcttg ccggtcgccg ccttttcctt tcccttcacc gccatgttgg tttccgtccc
      181 ctcacgtatt ggatcacttg tacaggtcga ccccgatcgc gcgcttgatc tttgcccgga
      241 ggtcttcctc ttcccgcttg ccgaccgcga tgaccacggg acggggagtc gtttcgagtc
      301 gccgccgcat cgtgttgctc agagccgtca tgtcgtccgc gctgaggatc aggatgccta
      361 cgttcgggtc ctcgaggacc ttcgcgacct gcgcctcgac ggcgtcgcgg ccgacgctga
      421 acgtcttccg gacgcccgcc agcttgaatc cttggacgaa ttcgtcccgg cccaccgcgg
      481 cgagttccat ctacaccacc aggaggtccc ggatcacggc ggagtccatc gcgctctcct
      541 tcccccgcgc gatgattcgt aggttctgga cctcccgctc cttgcggacg acgtagtcga
      601 ggatcggcaa gacggacagc ggatggacgt gcgcgtaccg gcccgcctcc agcaagtgga
      661 gcttctcgac cgagcgaacg agttgaccca ccccgagcgc ctgcaggtcc cggaggcggg
      721 acgataggtc ctccgtgagg gtgtactcgc ggagccgcgc ggtcagtgcg ttgacgtcca
      781 tctgcaccat ttcggacaac tcgtccgttg ggatctccag gccgcccgcc atgaacgggt
      841 cgtatgggag ggtggccttc gacgcccaca accggaggag ggtcttgaga ttcacgatat
      901 caacctcgcg ccggacgaac tcccgcatga ggcgggtccc ttccgtccgt tcgggcacga
      961 tgaaaaggag gttctcatag tagagctggg tcacgcggtc ctcccactcg ttccaccgct
     1021 cgacctggga cgctttcttt ccgagacccg cgagggcctg cccgtagatg gtcccttcga
     1081 gccgatcgaa gacctcgtcc aaggtcggca gctcgacgag cgcctggagg aacgactctt
     1141 tcatgcttcc ggcggcgacg aggtcctcca ggatttcggc ggacgatgcg ccgaacgtct
     1201 tccctcggac gatcgtcttg atgttctgca catcaaaccg gtccagatac catccgatca
     1261 tctgtcgaag ttcgccctcc gagaacccga tgatctgggt gaatacggcc gcgaggttgc
     1321 ggctcgtcgc gagctcgatc aggtcgacgc cggaggccct cgacgcgagg gcgagcacct
     1381 ccgccttgta cgcgccctcg ccgatgaccc gcgcgatctg gggaatctcc atctggagca
     1441 tccgctcgta cacgtccggg gagagcaggg cggctttctt ggcgcggacg cgggcggtca
     1501 catatggata gttcccgctc tcgatcggga ggtagcgcat cacccgtcgc cagtattgcc
     1561 cgaggtagga cgatgttccc ggggtcatcg gcgcggccat agcacctccg cgacctctcg
     1621 gatcgagtcc cgccagatgt cggcgaggag cgtctcgtac cgaaggtcga tccggtgggt
     1681 tccgtcgccg ctctcgatga cgatgccgcc gacgcagtcg atcgtcccgt cgaaactcgt
     1741 gccaaccacg gcccgcacga cgctggcgtc gttctcgttg cagtagacct tcccggtccg
     1801 ccagtcggcg gcctgcgcct tgaggagcga ttgcaggatg gccgccccat cctcgaggac
     1861 ggccagcttt ccgaggacct tcgcgtagac ctcgtccagg aggtcctttt ccgcggagag
     1921 cacgattttc ttgctctcga gctcggcccg cgcgagggcc tggacccgca atcgttccgc
     1981 ggcttgccgg gcttcccgct ctcggacctc gaggagcttc gctccctcgg cctgggcagt
     2041 ctgcaacatc cgctcgcgct ccgccagggc ggcgcggcgg atttcctcga cctcggagcg
     2101 tcctcgtccg aggacgtcct cgacgaccga ttcgagcccc atgccgaccg ctttagggag
     2161 ccgcgacctt cgtgagcagc tggagggcga tcacgagccc gaacacgacg atcgtctccg
     2221 ggagggccat caagaccagg ccccgcccga acaactcggg cttctcggcc atcgccccga
     2281 cggtcgcccc gccgacgatc ttctgcgtcc atgcggtcgc aattcctgtc ccagccatgg
     2341 ttatcgctgc ggccatcgca gctaacgggt ctgccattcg tctaaacctc ctgtgttcct
     2401 cggactccga agggacggaa cggaattccg ttgcccttgt agaacttgat gaaggcttcc
     2461 atgtaattga gccgcagggc ctggattccg gcggagatcc atccgaggag gaagacgagc
     2521 atctgggcca ggatgagaaa cgcgacaccc atgatgatga agccgatttg accggtgagg
     2581 atcaggtttt gcaggaggat gacgttgaag gccgaggcga tcgccgcctt cccgatcccg
     2641 atgccggcca gccgcatgta cgacatgatg ttcgcgagga ggctcgcgac ctcgatcggc
     2701 gcgatgaccg actcgaagag tccgaggagg gctccgagga tgaggatcag ggaggcgaag
     2761 gggatctcta cgcccaggaa accgcggagg ccgagcggtt cgatcacccg aggaaaccac
     2821 ccgagcggca cgttccagac ccagcgggcg atcggattcc accgcaagga gaaggtcaag
     2881 agggtgaaca ggccgaagag gcacatgaac catccgagct tggccagggc gtgtcgcttg
     2941 ttgtgatgga cttcgttgac gaacccgatc atgtatccgg tccccaggtg aagcgcggcg
     3001 aacagaagcg acagatagat catgtcgcca atcccgaagg ccttgtggat cagggtcggg
     3061 atcgggatga agaggccgaa cgactcccag ctcagttctt cgagatgagc cggaggcgga
     3121 tgg
//
LOCUS       DATLMA010000350         1509 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_515485, whole genome shotgun sequence.
ACCESSION   DATLMA010000350 DATLMA010000000
VERSION     DATLMA010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515485"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VNA10_04465"
     CDS             complement(<1..364)
                     /locus_tag="VNA10_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HVG36963.1"
                     /translation="MGESSPEDVRARLLPWYDAHRRDLPWRRTRDPYRILVAEYLLQR
                     TRIKNGTPYYERFLKQFPTVRDLAAAALDDVLAIWEGLGFYGRARNLHAAARAIVEEH
                     GGEVPSTFEALSALPGMGA"
     gene            complement(467..1123)
                     /locus_tag="VNA10_04470"
     CDS             complement(467..1123)
                     /locus_tag="VNA10_04470"
                     /inference="COORDINATES: protein motif:HMM:NF002305.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosylase/DNA lyase"
                     /protein_id="HVG36964.1"
                     /translation="MKPGFRNVDTLRIEYEAKQPAIEARLEEFRRTGREGDERLFEEL
                     CFCLMAIQSRARTSDAAVAALRKAELLWSGGPEEIAAFLRHRTRFHNHKAAFIVRARE
                     QFFPRGRGELAKMLDSFPSSKDARGWLVREVRGLGLKEASHFLRNTGRGEDLAILDRH
                     ILRNLIRHGVLRRLPRSLTQRRYLDIERRIERFSKEIGIPMAALDLIFWSRETGEIFK
                     "
     gene            1238..>1509
                     /locus_tag="VNA10_04475"
     CDS             1238..>1509
                     /locus_tag="VNA10_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017008230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Ni]"
                     /protein_id="HVG36965.1"
                     /translation="MSLLYLLARWLDRISPAPIAYAHCDIPCGIYDPHHAQLAAHTVV
                     RMVDLINQLEKPGASSTPEQRQEYTNKLARYIATKEQHSEIAKNEVR"
BASE COUNT          309 a          488 c          442 g          270 t
ORIGIN      
        1 acgcacccat gcctggaagg gcggagagcg cctcaaaggt cgagggcacc tcccctccat
       61 gctcctcgac gatcgcccgt gcggccgcgt gcaggttccg agcccggccg tagaagccca
      121 agccttccca gatcgcgagg acatcgtcca gggcggccgc cgcgagatcc cgaaccgtcg
      181 ggaattgttt gaggaaccgc tcatagtacg gcgtgccgtt cttgatccgg gtccgctgaa
      241 ggagatattc ggcgaccaag attcgatagg ggtcccgggt ccgacgccaa ggcaggtccc
      301 gtcgatgcgc gtcgtaccac gggagcagcc gcgcgcggac gtcctccggg gaagattctc
      361 ccatccctcg cgcgatgcgt cgagccacat atcaggattc ggaccaccga gcgatgggac
      421 cgtgatccca ctaatcaacc ttgaataagg gtaacgaacg agtcactcac ttgaagatct
      481 cacccgtttc gcgactccag aaaatcaagt cgagtgcggc catcgggatc ccgatctcct
      541 tcgagaaccg ctcaatccgt cgctcgatgt ccaagtatcg cctttgggtc aagctccgcg
      601 gcaaccgccg gaggacgccg tgacggatca agttccggag aatgtggcgg tccaagatgg
      661 cgaggtcctc gccccggccg gtgttccgaa gaaagtgact ggcctccttc agacccagtc
      721 cgcggacctc gcggacgagc cacccgcgag catccttcga ggacgggaat gaatccagca
      781 tcttcgcaag ttcgccacgg cctcgtggaa agaattgctc cctcgcacga acgatgaacg
      841 ccgctttgtg attgtggaac cgagtccgat gccgcaggaa cgcggcgatc tcctccggcc
      901 caccggacca caggagttcg gccttccgaa gcgccgcgac cgctgcgtcc gatgttcgtg
      961 ctctcgattg gatcgccatc aggcagaagc agagctcctc gaagagccgt tcgtcccctt
     1021 cgcgtccggt gcgacggaat tcctcgaggc gcgcctcaat cgcgggctgc ttagcctcgt
     1081 attcgattcg cagcgtgtcg acgttgcgaa agcctggctt caaggattcg gcaatcgggt
     1141 tgcggaccat aagactggcg ggaatctcga gcggaatgac cctggaactc cgttgcccgc
     1201 cgcacgttta aataaccgaa tccgctacga ggcgaccatg tcactgctgt acttgctggc
     1261 ccgctggctc gaccggattt ctccagctcc gatcgcgtac gcgcattgcg acattccctg
     1321 cggtatctac gatccgcatc acgcgcaact cgccgctcat acggttgtcc gtatggtcga
     1381 cctaatcaat cagctcgaaa agcccggagc cagctcgacg ccagagcagc gccaagagta
     1441 cacgaacaag ctcgcgcggt acatcgcgac gaaggagcag cactcagaga ttgcgaagaa
     1501 cgaggttcg
//
LOCUS       DATLMA010000351         2974 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_34952, whole genome shotgun sequence.
ACCESSION   DATLMA010000351 DATLMA010000000
VERSION     DATLMA010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34952"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VNA10_04480"
     CDS             complement(<1..304)
                     /locus_tag="VNA10_04480"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HVG36966.1"
                     /translation="MDAVLLLIQAVLIFGVAFIYANLGLGGGLLFVPILLSTGVPDKD
                     LAVPISLTLTIATATSSVINHHRRGLVDFRLGGVLLTGALIGAVVGTVFTLKVLNQE"
     gene            355..1233
                     /locus_tag="VNA10_04485"
     CDS             355..1233
                     /locus_tag="VNA10_04485"
                     /inference="COORDINATES: protein motif:HMM:NF014923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="THUMP domain-containing protein"
                     /protein_id="HVG36967.1"
                     /translation="MDGATELVLLVRFGEIALKSRFVRRQLRDRLVGNIQDLFAAEAV
                     ECITDSDEARVYVYVDDLSRARSILTRVFGVVSISPAEETHADIASLRDAVLAEAKRS
                     LPAGKTFALRTRRVGTHPFTSLDLARELGDDVRRAHPGARVNLSRPDVEIHIEVRQNR
                     GFVFREIWPGPGGLPLGSQGRGLAVVQDRNGMVAAWMGMKRGCRIAVATAPGEPLIEP
                     LRRWDVRLKVLELPPNGRLGDLVKITRADAVFLGTRWASFDPGGRVGLDVPLFEPVIG
                     LSDEEVGRLASQIESA"
     gene            complement(1237..1902)
                     /locus_tag="VNA10_04490"
     CDS             complement(1237..1902)
                     /locus_tag="VNA10_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011869124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15e"
                     /protein_id="HVG36968.1"
                     /translation="MADETPKAPEPELSIAPDAEAKPPARPRNLYAFVKQAWKNPRTG
                     VVKETHFQRMVEWRRGNAFVRVERPTRIDRARELGYRAKQGYVVVRARVRRGGRRRPR
                     PMGGRHPKRRGLVKITMAKSIQRIAEERAAKHYPNLEVLNSYWVGEDGMHKYYEVILV
                     DPNHPAIRNDPKINWICNPANRGRVFRGLTSAGKKGRGLLYKGKGAEKIRPSIGSHDR
                     TGK"
     gene            complement(2424..>2974)
                     /locus_tag="VNA10_04495"
     CDS             complement(2424..>2974)
                     /locus_tag="VNA10_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HVG36969.1"
                     /translation="SGPGDLVVDPMAGSGTIGDVARALGRRAVSFDLVPRRPHILRAD
                     ARAWPLPTKTAALAVIDSPYSDNVAYSTDPRCLGRISCRDARFYDEMEKVASEAHRVL
                     RPGGVLGWIIADEYRGGRYTPVGFRLLGVLERRFESIDTIVLVRHHDRSASPMWEHRA
                     RRFNFYLRGFKFLFLLRKPVAE"
BASE COUNT          555 a          976 c          922 g          521 t
ORIGIN      
        1 tttcctgatt cagcaccttc agcgtgaaaa cggtccccac gaccgctccg atgagcgcgc
       61 ccgtgaggag cacaccgccg aggcggaagt ccacgagtcc acgccgatga tgattaatca
      121 cggacgaggt cgcggtcgca atcgtcagcg tgagggaaat cggcaccgcc aaatccttgt
      181 cgggcacgcc ggtggacagg aggatcggca cgaacaagag gccaccgccg aggccgaggt
      241 tcgcgtagat gaacgcgacg ccaaaaatga ggacggcctg gatcaagagc aggaccgcgt
      301 ccatgcaacg cgaaagtcgg tgccgtatta attactgacg agaaatatcg ggacttggac
      361 ggtgcgaccg aattggtcct gctcgtacga tttggggaga tcgcgttgaa gagccggttc
      421 gtccgccgcc agctccgcga ccggctcgtc ggcaacattc aggatctctt cgcggctgaa
      481 gcggtcgagt gcatcacgga ctccgacgag gcccgggtct acgtctacgt ggacgacctc
      541 tcccgcgcgc gctccatcct cacgcgagtc ttcggcgtcg tatcgatcag ccccgccgag
      601 gagacgcacg cggacatcgc atcgctgcgg gacgcggtgc tcgccgaagc gaaacgatcc
      661 ctcccggccg ggaagacgtt cgcgctccgg acacggcgcg tcggcaccca tccattcacg
      721 agcctggacc tcgcacgtga gctcggcgac gacgtgcgcc gcgcccatcc cggtgcgcgc
      781 gtcaatctgt cgcggccgga cgtcgagatt catatcgaag tccgacagaa ccgtggcttc
      841 gtgtttcggg agatctggcc ggggcccgga ggactcccgt tggggagtca gggccgcggc
      901 ctcgcggtcg tccaagatcg gaacggcatg gtcgcggcct ggatgggaat gaaacgcgga
      961 tgtcgcattg ccgtggcgac cgcgcccggg gaaccgttga tcgagcccct ccgaagatgg
     1021 gacgtccgcc tgaaggtgct tgagctgcca ccgaacggac ggctcggaga cctggtgaaa
     1081 atcacccggg cagacgcggt gttcctcggg acccgttggg cctcgttcga tcccggagga
     1141 cgcgtgggcc tcgacgttcc cttgttcgaa ccggttatcg gactttcgga cgaggaggtc
     1201 ggacgtctcg catcccagat cgaatcggcg tgacgttcac ttgcccgtgc gatcgtgcga
     1261 gccgatgctc ggacggatct tctcggcccc tttgcctttg tacaagagcc cgcggccctt
     1321 cttccccgcc gacgtcaggc cacggaagac gcgcccgcgg ttcgcgggat tgcagatcca
     1381 attgatcttc gggtcgttcc ggatcgcggg atggttcggg tcgacgagga tcacctcgta
     1441 gtacttgtgc atcccatctt ctccgaccca ataggaattg aggacctcta agttcggata
     1501 gtgcttcgcg gcacgctcct ccgcgatccg ctgaatcgac ttcgccattg tgatcttgac
     1561 gagtccgcgg cgtttcgggt gtcgtccgcc catcggccgt ggccttcgcc ggccccctcg
     1621 gcggaccctt gcacggacga cgacataccc ttgttttgca cgataaccga gttcgcgtgc
     1681 gcgatcgatc cgcgtcggcc gctccacgcg gacgaacgcg ttaccgcggc gccactcgac
     1741 catccgctga aaatgcgttt ccttgacgac accggtccga ggattcttcc acgcctgttt
     1801 gacgaacgcg tacaggtttc gcggacgagc aggcggcttc gcctctgcat ccggggcaat
     1861 gctcagctcc ggttccggag cctttggggt ttcgtcggcc atttcccaac cccctggatt
     1921 tacggattcg cccgaaggta catctcccga ccagggacgt cgaaagcgcc gcgccaaagc
     1981 ccgggcagta ttaaagagct tgcttgcgcc gcgtccccga gccgatccga ccgccgttgc
     2041 ctctccggac acggtgttcg tacgactgaa tgatcagacg cgccgcggac tcgacctgcg
     2101 ccatcgatgt gacttcgaaa cgcgatcgga accatcccca cccttgactg cgtggggcgc
     2161 ggcgcgcaag tccggagcca tccgacaact cacgaagtcc cggcaagatg aagacctgga
     2221 cccgaccccg gagcggacga atctccgcga agacgcgatc tgcttgtcgg ctccgccatg
     2281 agatccactg gcgaccggca tgctcgagaa tccgatcgtg tcggcggtgt gccgcggtcc
     2341 gaacccgctc gcgaagtgcc ccgacaatct cccgcgacgt ccgagcgttc cattcgctga
     2401 ccgcttccaa tttggtcatc ccctcattcg gcaactggct tccgcagaag aaagagaaac
     2461 ttgaatcccc gcaggtagaa attgaaacgc cgagctcggt gctcccacat cggggacgcc
     2521 gatcgatcgt gatggcgaac caggacgatc gtgtcgattg actcgaaccg ccgctccagc
     2581 actccgagga gccggaaacc cacgggtgtg taacggcctc cccgatactc atccgcgata
     2641 atccaaccga ggacgccgcc ggggcgaagg acccgatgcg cttcggacgc gaccttttcc
     2701 atctcgtcgt agaaacgcgc gtcgcggcac gaaatccgac caagacaacg agggtccgtg
     2761 ctgtatgcga cattgtccga atacggggag tcgatcaccg cgagggcggc ggtcttcgtc
     2821 gggagaggcc aggcccgggc atccgcgcgc aggatatgag gccgtcgcgg cacgagatcg
     2881 aacgagaccg cccgacgacc gagagcccgg gccacgtcgc cgatcgtccc cgatccggcc
     2941 atcggatcta cgacgagatc accgggaccc gagt
//
LOCUS       DATLMA010000352         2065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_277532, whole genome shotgun sequence.
ACCESSION   DATLMA010000352 DATLMA010000000
VERSION     DATLMA010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277532"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VNA10_04500"
     CDS             complement(<1..471)
                     /locus_tag="VNA10_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018193449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HVG36970.1"
                     /translation="MATYAHPEVLVDTSWVKGNIGNETVRIVEVDYDPTPNYNLGHIP
                     GSVLIDWKRDINDPVSRDIVSKEGLEALFGRLGISNDHQIVLYGDFNNWFAAFAFWVF
                     KYYGVDNVVLLNGGRKKWIEQDLPVTKDVPTFPATTFTAKEPDETLRVYLAYVKE"
     gene            688..>2065
                     /locus_tag="VNA10_04505"
     CDS             688..>2065
                     /locus_tag="VNA10_04505"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HVG36971.1"
                     /translation="MRGSWKFVVALGFVGMMLGGLGPAAAFIDDMEDDFWLPFTHFHL
                     GDRASAGYSSGFARSGARSYHVEISGWTVRDFGSAYGYAVYATRRAPITELRASILYE
                     RLQDISPSPWDSYSAGISLDLLDASYRSLGRLRYITSYHASQNAGRCAPTLADVALPA
                     PAGLGTWTAFGRSPTADFPAAPWQSAEYVKISIGFLCAAGLTGARYSLYFDDFMLDAG
                     SRDTDADGLVDLEEEARIYAARVWAAPVARPFAPEASTTLDIESPPVVGLAASAAVDL
                     QIDHANPTDLSVALTFSGATGHRTQVLWDPGLHVRGATILTPTYGSSVRGAVRVHGNV
                     VQPHASVRLRVDNVVTATSEADPNGAFEISWDSDAGTEGAHQLTVLAEIADGAQTVTR
                     SSQDVLVFADRTAPEVSLSRPANGETLSGLALIEAGVFDGQGVATVELWIDGVRVDAR
                     ADEPYTFAY"
BASE COUNT          339 a          668 c          645 g          413 t
ORIGIN      
        1 ctccttgacg tacgcgaggt agacccggag cgtttcatcc ggctccttcg cggtgaacgt
       61 cgtcgcgggg aacgtgggca cgtccttcgt cacgggcagg tcttgctcga tccacttctt
      121 ccgcccgccg ttgaggagga cgacattgtc gaccccgtaa tacttgaaca cccagaacgc
      181 gaacgccgcg aaccagttgt tgaagtcgcc gtacaacacg atctgatggt cgttcgagat
      241 gccgagacgg ccgaacagcg cttcgaggcc ttccttcgag acgatgtccc ggctcaccgg
      301 atcgttgatg tctctcttcc agtcgatcag gaccgatccg gggatgtgac ccaggttgta
      361 gttcggcgtc ggatcatagt cgacctcgac gatccgcacg gtctcgttgc caatgttgcc
      421 cttcacccag ctcgtgtcga ccaggacttc gggatgcgcg taagtcgcca tcgtctgtcg
      481 ctccaggtcg tccgaagtat tacaccgtta tatttcttgc gcatatcggt attcctatgc
      541 gactactcag tccagtcgga tcgagacggc gggtccccgg aacccttagt tttgttacat
      601 ctgcgaagta gtttgaaata cctctccgtg gaatctcgac gcggaggagc gtggggccgt
      661 cgtccccgtg ctttcggggg agggatcatg cgcggctcct ggaagtttgt cgtagcgcta
      721 ggcttcgtcg ggatgatgct cggtggattg ggaccggcgg cggcgttcat cgacgacatg
      781 gaggatgact tctggctccc gttcacccat tttcacctgg gggaccgcgc ctcggccgga
      841 tattcctcgg ggttcgcgcg ttccggtgcg cgatcgtatc atgtggaaat ctcgggctgg
      901 acggttcgtg atttcgggtc ggcgtacgga tacgcggtgt acgccacccg tcgcgccccg
      961 atcacggagt tgcgcgcttc catcctgtac gagcgcctgc aagacatctc cccgtcgccg
     1021 tgggactcct actcggcggg aatcagcctc gatctcctcg atgcgagcta ccgcagcctc
     1081 ggccgccttc gatacatcac gtcataccat gcaagccaga atgcaggacg atgcgcaccg
     1141 accctcgccg atgtcgccct tccggccccg gctggccttg gaacctggac cgccttcggc
     1201 cgaagtccga ccgccgactt cccggcggca ccttggcaat ccgcggagta cgtgaagatt
     1261 tcgatcggat tcctctgtgc ggcgggactc accggggccc gctattccct gtacttcgac
     1321 gacttcatgc tcgatgccgg ttcgagggac acggatgcgg acggcctcgt cgacctcgag
     1381 gaggaggcga ggatctatgc ggcgcgagtc tgggccgccc cggtcgcccg accgttcgct
     1441 ccagaggcct cgacgacgtt ggacatcgag tcgccgccag tggtggggct cgcggcgtcc
     1501 gcggcagtcg acctccagat cgaccacgca aacccgaccg acctttccgt agctcttacg
     1561 ttctcgggag cgaccggcca tcgcacgcag gtattgtggg accccggact ccatgtccgc
     1621 ggggcgacga ttctgacgcc gacatacggg tcctcggtcc gcggcgcggt ccgggtacac
     1681 ggaaacgtcg tccaacccca cgcctccgtc cgcctgcgcg tggacaacgt cgtgacggcc
     1741 acgtcggagg cggatccgaa cggtgcgttt gagatttcgt gggactcgga tgcagggacg
     1801 gaaggggccc accaactgac cgtcctcgcc gagatcgcgg atggggcaca gacggtcacg
     1861 cgaagctcgc aggacgtcct cgtgtttgct gatcgcacgg ccccggaagt ctctctcagc
     1921 cgccccgcga acggcgaaac gctcagcggc ctcgccttga tcgaggcggg cgtcttcgat
     1981 ggccaagggg tcgccaccgt cgagctgtgg attgacggcg tccgcgtcga cgcacgcgcc
     2041 gacgaaccgt acacgttcgc gtacg
//
LOCUS       DATLMA010000353         1139 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_401026, whole genome shotgun sequence.
ACCESSION   DATLMA010000353 DATLMA010000000
VERSION     DATLMA010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401026"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..551)
                     /locus_tag="VNA10_04510"
     CDS             complement(96..551)
                     /locus_tag="VNA10_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HVG36972.1"
                     /translation="MSSTKSRNNKAIVDRWFTEFWGKSWNPKIVEELGAPDILLQYLL
                     QAPRRGHADVKTFMTEFREAFPDLSVTGAADFVCEGDYVVGRWEGWGTHTGPAYCDFL
                     VGCLPAASAQKMRFSGTTVLRISNGKIAEQIGLDDGVTALLQLGLRGAA"
     gene            complement(708..>1139)
                     /locus_tag="VNA10_04515"
     CDS             complement(708..>1139)
                     /locus_tag="VNA10_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007732229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HVG36973.1"
                     /translation="NKAIVGRWFTEFWGNPRNPAIVDELCTPDILLQYSLHAPRRGRA
                     DVKAFMTAFREAFPDLSFAGAADLIAEGDYVVGRWVGGGTHTGPAFSDFLQGSLPAGS
                     GRKMRFTGTTVLRVENGKIAEEIGLDDGVTALTQLGLIRAA"
BASE COUNT          213 a          366 c          348 g          212 t
ORIGIN      
        1 gcggtcagtg gactctagca gaccgctggc gcctcggccg acgggcgatc aggattcgta
       61 ccggaatgag ttcggtcaca agaagtgcga ctcgatcacg ctgcgcctct gaggccgagc
      121 tgcagcaacg ccgtcacgcc atcgtcgaga ccgatctgct ctgcgatctt accgtttgag
      181 atacgaagga cggtcgttcc cgagaaccgc atcttctggg cggacgccgc cggaaggcaa
      241 ccgacaagaa agtcacaata agcgggaccc gtgtgtgttc cccagccttc ccaacgtccg
      301 acaacataat cgccctcgca gacgaagtcc gcggcgcccg tgacgctcag gtcggggaac
      361 gcctcgcgga actcggtcat gaacgtcttc acgtccgcat gcccgcggcg cggcgcctgc
      421 agtaaatact gcaggaggat gtcgggcgcg ccgagttctt cgacgatctt tggattccag
      481 gacttgcccc agaattccgt gaaccatcgg tcgacgatgg ccttgttgtt ccgactcttt
      541 gttgaactca tgacttgctc cttgccggtg accggcttca atcgtcgcgc gggccgagga
      601 cgcgccgagc agcgaggtga accggaccgg gcgtgacgct tcggtccagt tcatctcacc
      661 tcgtcgttgc ggattgtcgc cgtggcgaca ttggccgcgc tgttcgatca ggctgcgcgt
      721 atgaggccga gttgcgtcaa cgccgtcacg ccatcgtcca ggccgatctc ctcggcgatc
      781 ttgccgtttt cgacacgaag gacggtcgtt ccagtaaacc gcatcttccg gccagagccc
      841 gctgggagcg agccctgaag aaagtcactg aaggccgggc ccgtgtgcgt gccaccgccc
      901 acccaacgac cgacgacgta gtcgccttcc gcgatgagat ccgcagcgcc cgcaaaactc
      961 agatcgggga acgcttcgcg gaacgcggtc atgaacgcct tcacatccgc ccgaccgcgg
     1021 cgcggcgcat gcagcgagta ctgcaagagg atgtcgggcg tgcagagctc gtcgacgatc
     1081 gctggattcc gtggattgcc ccagaattcg gtgaaccatc ggcctacgat ggccttgtt
//
LOCUS       DATLMA010000354         1533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_277886, whole genome shotgun sequence.
ACCESSION   DATLMA010000354 DATLMA010000000
VERSION     DATLMA010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277886"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VNA10_04520"
     CDS             <1..393
                     /locus_tag="VNA10_04520"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HVG36974.1"
                     /translation="LATTALLAAIPLFFVGWPIPTNGGGWLGIAYLGLVPTFAPLMLY
                     VASMRSVSPTVSGLLILLEVVVAAILSFVLLQDALSAYTLAGGAMILMGAFVVTRNEA
                     GMPQPATGGLRPVPQDTVVAKSESRPPR"
     gene            complement(527..1300)
                     /locus_tag="VNA10_04525"
     CDS             complement(527..1300)
                     /locus_tag="VNA10_04525"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HVG36975.1"
                     /translation="MTDAAAYSLVAGISVGFAAGYVGSLMVLKRMALVGDALSHVALP
                     GLALGILFNFNPFFGAFAFLFSAAVLTWYIEKTTKLFPESIIGVLFVTALAVGILLTP
                     KVDLLEALFGDITTVSLVDALLAVGISAPIVVVARLVYRRVVLGILSEELARSTGVNV
                     ALVNFVYLFLVTLVVAVGIKIVGTVLVGALVVVPAAAMKNVSRNLSSYALLSGLTGTA
                     SAGSGILLANYLGLPAGPLVVSVGTAIFAAALVANRIAS"
     gene            complement(1297..>1533)
                     /locus_tag="VNA10_04530"
     CDS             complement(1297..>1533)
                     /locus_tag="VNA10_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36976.1"
                     /translation="LYEALNRLEKESNITVLLITHDIHIASQYSDAVLALNRTVRFFG
                     APSRLSEPDLLMEIFGSGAGLAEHKHDFGSRGFR"
BASE COUNT          314 a          487 c          491 g          241 t
ORIGIN      
        1 ctcgcgacga ccgcgctcct cgcggcgatc cctctgtttt tcgtgggatg gcccatcccg
       61 acgaatggcg gcggttggct ggggatcgcc tatctgggcc tcgtcccgac cttcgcgccg
      121 ctcatgttgt acgtcgcgag catgcgctcg gtctccccga cggtctccgg gctgctgatc
      181 ctcctggagg tcgtggtcgc ggcgatcctt tcgttcgtcc tcctgcagga tgcgctgagt
      241 gcctacaccc tggcgggcgg cgccatgatc ctgatgggcg cgttcgtcgt cacgcgcaac
      301 gaggcgggaa tgccgcagcc cgcaacgggt ggtctcaggc cagtgccgca ggatacggtc
      361 gtggcgaaat ccgaaagccg gcctccgcga tagcgggccc cggcaggccc gattcgcgac
      421 gacctatctc gattcgatgc ggtgacggcg actcccgccc aaacaacgcg ccatgaggca
      481 ctgcccgaca acgtgacaat tcagatgccg aggccgaaca cgaggtttag gaagcgatcc
      541 gattggccac gagggcagcc gcgaagatcg ccgtcccaac cgacacgacg agcggcccgg
      601 cgggcaaacc gaggtaattg gccaagagga ttcccgaccc cgcgctcgcg gtcccggtga
      661 gaccgcttag caacgcgtag gacgagagat ttcggctgac gtttttcatc gccgcggccg
      721 ggacaacgac aagtgccccc acgaggaccg tgccgacgat cttgattccg accgccacga
      781 cgagggtcac gaggaacagg tagacgaagt tgaccaaggc cacgttaacc cccgtcgacc
      841 gggcgagctc ctcggacagg atacccagga cgactcgccg gtacacgagc cgcgcgacga
      901 cgacgattgg agcggaaatt cccaccgcaa ggagggcgtc taccagcgag accgtcgtga
      961 tgtcgccgaa gagcgcctcc aagaggtcga ccttgggggt caagagaatc cccacggcga
     1021 gagcggtgac gaacaagacg ccgatgatcg actcggggaa cagtttggtg gtcttctcga
     1081 tgtaccaggt tagcaccgcg gcggaaaaga ggaacgcgaa cgctccaaag aacggattga
     1141 agttgaacag aattccgaga gcgaggcctg gcaaagcgac gtgggagagc gcgtcgccca
     1201 cgagggccat ccgtttcaag accatcagag acccgacata gcccgcggcg aagccgacgg
     1261 agatccccgc gacgaggcta tacgccgccg cgtcggtcat cggaatcccc tggacccgaa
     1321 atcgtgcttg tgttccgcga ggcctgcacc gctcccgaag atctccatca acagatccgg
     1381 ctccgagagg cgactcgggg ccccaaagaa tcggaccgtc cggttcagag ccaacaccgc
     1441 gtcggaatac tgagaggcga tgtggatgtc gtgcgtgatc aggaggaccg taatgttgct
     1501 ctccttctcc agccgattga gggcctcgta aag
//
LOCUS       DATLMA010000355         1934 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_455693, whole genome shotgun sequence.
ACCESSION   DATLMA010000355 DATLMA010000000
VERSION     DATLMA010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455693"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..807)
                     /locus_tag="VNA10_04535"
     CDS             complement(202..807)
                     /locus_tag="VNA10_04535"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HVG36977.1"
                     /translation="MRLPLFPLHTVLFPETTLPLHVFEPRYREMIGRCLEHDESFGIA
                     LILDGDEVGGHAIPRRIGTEASIIACQRNGHGEYDIVVEGQRRFTIRSLDRGRAYLRA
                     DVDWMEEPLGKDVELLADAVVRLVAGFVEILETGGHAIVDDTWREMDPRTLSFRVAAA
                     LPGAVDVRQELLEMPDTASRLRREAELLMAVHRIGAETGAA"
     gene            complement(844..1002)
                     /locus_tag="VNA10_04540"
     CDS             complement(844..1002)
                     /locus_tag="VNA10_04540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36978.1"
                     /translation="MTVGGLNFSCPRCNNPLFFTFKLADEGDAMRREVNCPGCRTAWV
                     VALDIRPK"
     gene            1089..1721
                     /locus_tag="VNA10_04545"
     CDS             1089..1721
                     /locus_tag="VNA10_04545"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HVG36979.1"
                     /translation="MRVEKVVSPPLDNNAYFLFDETSKLAAVVDPALAGKALLANSEK
                     FGVKIVYILNTHGHPDSTADDESIRSATGAKIAIFEVDAPRLEKNARGSRWFLPAPPS
                     PIKADLLLKEGSELRLGNEVITTLHTPGHTEGSACFYVESASALFTGDTLYAGSCGRT
                     DVQGGSPAKMVFTLRRLKELPPDTRVYPGHGPETTMGDETWISDLTYPVV"
     gene            complement(1722..>1934)
                     /locus_tag="VNA10_04550"
     CDS             complement(1722..>1934)
                     /locus_tag="VNA10_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36980.1"
                     /translation="AIVGLVAIVWQYYWPLTLVILYAYFLVVVFSMKVVYRRLGLGIT
                     RRVARVRLVRHMPAARSWRAASGVRR"
BASE COUNT          387 a          633 c          600 g          314 t
ORIGIN      
        1 agaagctctc ccggcccacg atgacatggc gccagatgtc ccaatacagt ccgaaggctt
       61 ggaggagcaa accggtgagc gcaaacgcga agatggccca tcggggcacg cgggacaacg
      121 gacgaaggag gcgtggtacg tccatcggtg gcactcgcag gcccgcagcc atcgtccggc
      181 ggatatttca agccccgcga atcacgcggc tcccgtctcc gctccgatcc ggtggaccgc
      241 catgagaagt tcggcttccc ggcgcagtcg cgaggcggtg tccggcatct cgaggagctc
      301 ctgtcgcaca tcgaccgcac cgggcaaggc tgccgcgacc cggaacgaaa gggtccgtgg
      361 atccatctcc ctccaggtgt cgtccacgat tgcgtgtcct cccgtctcga ggatctcgac
      421 gaatcccgcg acgaggcgga cgaccgcgtc cgcgaggagt tccacgtcct taccgagagg
      481 ttcctccatc caatcgacat cggcccgcag atatgcgcgg cctcggtcga gcgaccgaat
      541 cgtgaaacgc ctctggcctt ccacgacgat gtcgtattcg ccatgcccgt ttcgctgaca
      601 cgcaatgatg gacgcctcgg taccgatccg gcgcggaatc gcgtgaccgc cgacctcgtc
      661 gccatcgagg atcaaggcaa tcccgaacga ctcatcgtgc tcgaggcagc gtccaatcat
      721 ctctcggtac cgaggctcga acacgtgcag cggcaacgtg gtctcaggaa acaggaccgt
      781 atggagcggg aagaggggga gacgcacgct cggcagccat tccgcgggaa accataaggg
      841 tgcctacttt ggtcggatgt cgagcgctac gacccaagcc gtgcggcatc ccggacagtt
      901 cacttcgcgg cgcatcgcat cgccctcgtc agccaacttg aacgtgaaga agagcgggtt
      961 gttgcaccgc gggcaactga aattcaggcc gccgaccgtc atgcaagtgc ctcgaagccc
     1021 cgagcggact taaggttgcg ctcgcctccc ggcaagttta tgaaagtctc gtccttcccg
     1081 agtcgttcat gcgcgtcgag aaggtcgtgt cgcccccgct cgacaacaat gcgtacttct
     1141 tgttcgatga gacgagcaaa ctagccgcgg tcgtggatcc cgctctggca ggcaaagcgc
     1201 tcctggcgaa ttcggagaag ttcggcgtga aaattgtcta catcctgaac acccacggac
     1261 atccggattc gaccgccgac gatgaatcga tccggtccgc cacaggggcg aagatcgcga
     1321 tcttcgaggt cgacgcgccg cggctcgaga agaatgcgcg agggtcgcgg tggttcctcc
     1381 cggctccgcc ctcaccgatc aaagcggatt tgctcctgaa agaaggctcc gaactgaggc
     1441 ttgggaatga ggtcatcacg acccttcaca cgccgggtca cacggagggg agcgcctgct
     1501 tctatgtcga gtcggcgagc gccctcttca ccggcgacac cctgtacgcg gggtcgtgcg
     1561 gccggaccga tgtccaaggc gggagcccgg cgaagatggt cttcaccctc cgtcgactga
     1621 aggagcttcc gcccgacacc cgcgtctacc cgggccatgg gccggagacg acgatgggcg
     1681 acgagacgtg gatcagcgac ctcacgtacc ccgtcgtctg atcagcggcg gacgccactc
     1741 gcggcccgcc agctccgcgc cgccggcatg tgacgcacca gccggacgcg ggcaacccgt
     1801 cgggtgatgc ccagccccag gcggcggtag acgactttca tgctgaacac cacgacgagg
     1861 aagtatgcat agaggatgac gagcgtcaag ggccaatagt actgccacac gattgccacg
     1921 agcccgacga tggc
//
LOCUS       DATLMA010000356         1263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_760904, whole genome shotgun sequence.
ACCESSION   DATLMA010000356 DATLMA010000000
VERSION     DATLMA010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_760904"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VNA10_04555"
     CDS             <1..338
                     /locus_tag="VNA10_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG36981.1"
                     /translation="ARLIDPLTGGGILNGCLSGRYAGEVAADAIEGEATEEALRAYDA
                     KWRARMEEELARHYLIKERLIRVDDETINKVLRAVSELRVNQLSTTAVLEAIRAKYPE
                     VLKAFEGLL"
     gene            complement(370..1137)
                     /locus_tag="VNA10_04560"
     CDS             complement(370..1137)
                     /locus_tag="VNA10_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HVG36982.1"
                     /translation="MARNLYFLGTAGSGKSTMVYAFQLWLNSQGLDCVTVNLDPGAEA
                     LQYSPDLDVRDYVNLEEVMAEQGLGPNGAQVAAADMAAMNAKELADVLETFETNYVLI
                     DTPGQIELFTFRASGPVLIDAFGREDSALVYLNDPALVKNPSGFISSVLLNAIVQFRH
                     GLPFVNVLSKADLLPEPDLERIVKWSLDPFALYEALFEEAATPKTLLDVEFLKSIEVI
                     GVYRRVHPVSSELTFGFEEIYSQVQQVFEGGEDLSKD"
BASE COUNT          244 a          376 c          416 g          227 t
ORIGIN      
        1 cggccagact gatcgacccg ctcaccggcg gcgggatcct caacggctgc ttgtccgggc
       61 ggtacgcggg cgaagtcgcc gccgacgcga tcgagggaga ggcgaccgag gaggcgcttc
      121 gggcctacga tgcgaagtgg cgcgcacgaa tggaggagga gctcgcgcgg cattacctga
      181 tcaaagagcg cctcatccga gttgacgacg aaacaatcaa caaggtctta cgtgcagtct
      241 ctgaactacg agtgaatcag ctttccacca ctgccgtcct ggaggcaatt cgcgcgaagt
      301 atccggaggt cctcaaggca ttcgagggcc ttctgtgatt cagcaagacg tggcttggac
      361 ggcccgcgct cagtccttcg acaagtcctc gccgccctcg aagacctgct ggacctgact
      421 gtagatctcc tcgaagccga acgtcagttc ggaggacacg gggtgaacgc ggcggtagac
      481 gccgatcacc tcaatgctct tcaggaactc gacgtcgaga agggtcttcg gtgttgcggc
      541 ctcctcaaag agagcttcgt acagggcgaa cgggtcgagc gaccatttca cgatccgctc
      601 gaggtccggc tcggggagga gatccgcctt actcaggacg ttgacgaagg gcaaaccgtg
      661 gcggaactgg acgatggcgt tgaggaggac ggaggagatg aagccgctcg ggttcttgac
      721 gagggcggga tcgttgaggt agaccagcgc ggagtcctcg cgcccgaacg catcgatcag
      781 gaccgggccg gacgcccgga aggtgaagag ctcgatctgg cccggggtgt cgatgaggac
      841 atagttcgtt tcgaatgtct ccaggacgtc cgcgagctcc ttcgcgttca tcgcggccat
      901 gtccgcggcg gcgacctgcg cgccgttcgg cccgaggccc tgttccgcca tgacctcctc
      961 caggttcacg taatcgcgga cgtcgaggtc gggcgagtac tgaagggcct ctgcgcccgg
     1021 atcgaggttg accgtcacgc agtcgagtcc ttgggagttc agccacagtt ggaacgcgta
     1081 gaccatcgtc gacttccccg aacccgcggt gccgaggaag tacaggttac gagccatcga
     1141 cgcgccgcgt acgggttcga gtgagatgaa ggttcgcgac cgaggaccct tctaacggta
     1201 ttgctcgtcg ctgaccttct ccaaccagtt gaccgccttg ccgtcaggct gctcctgaat
     1261 ggc
//
LOCUS       DATLMA010000357         1772 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_516078, whole genome shotgun sequence.
ACCESSION   DATLMA010000357 DATLMA010000000
VERSION     DATLMA010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516078"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..1174)
                     /locus_tag="VNA10_04565"
     CDS             complement(140..1174)
                     /locus_tag="VNA10_04565"
                     /inference="COORDINATES: protein motif:HMM:NF012945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HVG36983.1"
                     /translation="MRRRIVLVGFGNVGREFTRLLLERRSELTREFGLDASIVAILTA
                     RHGSVENPRGIDLRKALRLADAGVSLESCGRGISRTAPAYIRQARTDIVIELTPLRIG
                     PRQIAVEHGLAALHTGKHLITANKGPVVYHYRRLRDLARQNRVGFRYEGTVMDGAPVF
                     NLFQEALRGARIESFEGILNSTTNLVLSEIEAGRTYADGVEAARRIGFLETDPSMDLD
                     GWDATMKACLLANVLMGGRLRPERVPRQGVSSMPSDAVRIAGMEGKRVKQVARGWREG
                     RAVRASVSLESIGSDHPLFSVNGTSSSLVVRTDMLKEFQIVERDPGLRQTAFAVYSDL
                     IAIHEGHLSP"
     gene            complement(1187..>1772)
                     /locus_tag="VNA10_04570"
     CDS             complement(1187..>1772)
                     /locus_tag="VNA10_04570"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="cyclodeaminase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HVG36984.1"
                     /translation="IVGVGTQARFQLDAILGVRKPERVIAYGRSEAKASRFAQEMEKR
                     HGIRVLPAKTVEQAVRGSDVVVTVTPSREPLVHAEWVLPGTHITAVGADSPDKQELDV
                     QVLKKADKVVADHLDQCIRLGEIHHAIEAGVLRPADVYAELGEIAAGRKPGRTSDGEI
                     TVAALTGVGVQDAALAEFVVVAAARQGAGRAVEM"
BASE COUNT          302 a          618 c          551 g          301 t
ORIGIN      
        1 aggccgatca acacgcgctc ggggcggcct tcgaacgcag cgcgcaagag tgcctcgtgc
       61 cctgtgtgca ggatgtcgaa cgtccccccg aggacgaccc gcatcgtcga cccatccggt
      121 ccgcgcgata taagcgtgct cacggcgaaa gatggccttc gtggatcgcg atcaggtcgg
      181 agtacaccgc gaacgcggtt tggcgcaacc ccggatcccg ctccacgatc tgaaattcct
      241 tgagcatgtc ggtccgcacg acaagggagc tcgaggtgcc gttcaccgag aacagcggat
      301 gatccgagcc gatcgattcg agggacacgg acgctcgcac ggcgcgtccc tcccgccatc
      361 cccgggcgac ctgcttcacg cgcttccctt ccatgcccgc aatccgaacg gcgtcggatg
      421 gcatggacga caccccttgc cgcgggaccc gctcgggtcg gagacggccg cccatgagga
      481 cgttcgcgag gagacacgcc ttcatcgtgg cgtcccatcc gtcgaggtcc atcgatggat
      541 ccgtctccaa gaatccgatt cgccgcgccg cctcgacgcc gtccgcatag gtccggcccg
      601 cctcgatctc ggagaggacg agattcgtcg tgctgttcag gatgccttcg aaggattcga
      661 tccgcgctcc gcgaagcgcc tcttggaaca ggttgaacac cggtgcgcca tccatcacgg
      721 tcccttcata gcggaatccg acgcggttct ggcgggcgag gtcgcgcagg cgacgatagt
      781 ggtacacaac gggacccttg ttcgcagtga tcagatgctt gccagtgtgc agcgccgcga
      841 gcccgtgttc gacggcgatc tgccgcgggc caatccgcag cggtgtgagc tcgatcacga
      901 tgtcggtccg ggcctgccgg atatatgccg gtgccgttcg ggaaatgccg cggccgcacg
      961 attcgaggga gacgcccgca tcggccaggc ggagcgcctt ccgcaaatcg atcccgcgag
     1021 gattctcgac ggagccgtga cgcgccgtga gaatcgcgac gatggacgcg tcgagtccga
     1081 actcacgagt caactcggac cgccgctcga gaaggagtcg cgtgaactcc cggcccacat
     1141 tcccgaaacc gacgaggacg atccgacgcc gcattcggtt ccgccttcac atctcgacgg
     1201 ctcttcccgc cccttgccgc gctgcagcga cgaccacgaa ttcggccaac gcagcatcct
     1261 gcaccccgac gccggtcagg gcggcgaccg tgatttcgcc atccgaggtt cgaccgggct
     1321 tccgtcccgc cgcaatctcg cccagctctg cgtagacgtc cgcggggcgg agcacgcccg
     1381 cctcgatggc atgatggatt tcccccaggc ggatgcattg atcgaggtga tcggccacga
     1441 ccttgtcggc ctttttgagc acctgcacat cgagctcttg cttgtccgga ctgtccgctc
     1501 cgacggccgt gatgtgcgtc cccggcaaga cccattcggc gtgaacgagc ggctcgcgag
     1561 agggcgtcac tgtgacgacg acgtcggatc cgcgcacggc ctgttcgact gtcttcgcgg
     1621 ggagcacccg aatgccgtga cgcttctcca tctcctgcgc aaagcggctc gccttcgcct
     1681 cggaccgacc gtaggcgatg acgcgctccg gcttcctcac gccgaggatc gcatcgagct
     1741 ggaagcgcgc ctgcgtcccc acgccgacga tc
//
LOCUS       DATLMA010000358         1683 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_35528, whole genome shotgun sequence.
ACCESSION   DATLMA010000358 DATLMA010000000
VERSION     DATLMA010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35528"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..650
                     /locus_tag="VNA10_04575"
     CDS             117..650
                     /locus_tag="VNA10_04575"
                     /inference="COORDINATES: protein motif:HMM:NF017570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF835 domain-containing protein"
                     /protein_id="HVG36985.1"
                     /translation="MRRLLWPLLLAFKEDELLKDLLFGKKKDLEEGRAYLMKEKKPEK
                     ALSAFQQAVDAGWRPMYITRQHPNHIVRRRGEKEIRIVWLSTTLGKDYIDPHNLNSLS
                     NLIANFVNDGPRAVILLDGIEYLMINNDFARILHFLEYVNEQIALHRAALILSVDERA
                     FDAKELAYIERNTVALE"
     gene            690..>1683
                     /locus_tag="VNA10_04580"
     CDS             690..>1683
                     /locus_tag="VNA10_04580"
                     /inference="COORDINATES: protein motif:HMM:NF013835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5591 domain-containing protein"
                     /protein_id="HVG36986.1"
                     /translation="MLEIDARGGLGRKGRWTRGERTLTTPLVLFLHGGARTAPSYAEG
                     LLVSERTEDPRFQVRVGGSFFAPRPANDPDDLPPAKGIPLALADLEIPHAAVAGDWAV
                     VSGESDLVAAKEVSGVFIANGPEFERSPREFVSAIRELRGTLGPAKVVAVTGLATPSN
                     ISVLVYAGIDVVDSSRMRLDSARGLFHTADGTVPLSEADRDACGCPACAAGEDLGAHN
                     DRALFREMLLVRNHLVHGRLRELVERRLANAPWNTAVVRHLDLREYDLVEPYTSVAGG
                     EMRAYSAESLARPEIVRFRRRIRERYAKPPSARVLLLLPCSARKPYSTSRSHRRF"
BASE COUNT          301 a          549 c          531 g          302 t
ORIGIN      
        1 cgggcgtcat cgatggctcg gttcggaagg cgcggtcgcc cgtccaaaat gactctcacg
       61 tgcgatagtc gataggatac gtataaaaac cgacctccgg atggcaaggt ggttccatgc
      121 ggcggctcct atggccgctc ctgctcgcct tcaaggagga cgagcttctc aaggacctgc
      181 tcttcggcaa gaagaaggac ctcgaggaag gacgcgccta cctgatgaag gagaagaagc
      241 ccgagaaggc cctctcggcg tttcagcagg cggtcgatgc tggctggcgc cccatgtaca
      301 tcacccgcca acacccgaac cacatcgtcc gtcgccgggg ggagaaggag atccgcatcg
      361 tctggctctc gacgacgctc ggcaaggatt acatcgatcc gcacaatctg aacagcctga
      421 gcaacctgat cgcgaacttc gtgaacgatg gaccgcgcgc cgtcatcctg ctcgacggga
      481 ttgagtatct catgatcaac aacgacttcg cgcgcatctt gcacttcctg gaatacgtca
      541 atgagcagat cgccctgcac cgggccgcgc tgatcctgag cgtggacgag cgcgcgttcg
      601 atgcaaagga actcgcgtac atcgagcgga acacagtcgc gctggagtag tcagacttta
      661 tactcgggcg gagcatcgcg gcgacctcca tgttggagat cgatgcgcga ggcggtctcg
      721 gtcgcaaagg gaggtggacc cgcggcgagc gcacgttgac gacacctctg gtcctgtttc
      781 tccatggcgg tgctcgaacg gcgccgtcgt atgccgaggg gctcctcgtt tccgagcgga
      841 ccgaggatcc tcggtttcag gtccgggtcg gcggaagctt cttcgcgccg cgaccggcca
      901 acgatccgga cgaccttccg ccagcgaaag ggatcccgct ggccctcgcc gacctcgaga
      961 tcccgcatgc ggccgtcgcc ggcgactggg ccgtggtctc cggggaatcg gacctcgtcg
     1021 ccgcaaaaga agtttccggc gtgttcattg caaacggacc ggaattcgaa cgatcccctc
     1081 gcgagttcgt ctcggcgatc cgggagcttc gggggaccct aggccccgca aaggtcgtcg
     1141 cagtcaccgg attggccacg ccgtcgaaca tctcggtcct cgtgtacgcc ggaatcgatg
     1201 tcgtcgactc gagtcggatg cgtctcgata gcgcacgcgg tctgttccac accgcggacg
     1261 ggacggtccc cctctcggaa gcggaccgcg acgcgtgcgg ctgtcctgcg tgtgcggccg
     1321 gtgaggacct cggcgcgcac aacgaccggg cgctgttccg cgagatgctc ctcgtccgga
     1381 atcacctggt ccatggccgg ctgcgggagc tcgtggagcg tcgccttgcg aacgccccgt
     1441 ggaacaccgc cgtcgtgcgt catctcgatc tgcgggaata cgatctcgtc gagccataca
     1501 cgtcagtcgc cggcggcgag atgcgggcct actccgccga gtcgctcgct cgacccgaga
     1561 tcgtccgatt ccgacggcgc atccgggagc ggtatgcgaa accgccttcg gcgcgggtcc
     1621 ttctgttgct cccgtgttcc gcccgtaaac cgtactcgac aagtcgcagc catcgccgct
     1681 tcc
//
LOCUS       DATLMA010000359         1104 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_278180, whole genome shotgun sequence.
ACCESSION   DATLMA010000359 DATLMA010000000
VERSION     DATLMA010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278180"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VNA10_04585"
     CDS             <1..361
                     /locus_tag="VNA10_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36987.1"
                     /translation="AEYYLEHELHVQGERYEPWYRFHWPVHYYYDLLVGLDCLTALGY
                     GKDRRLGYALDLLRKKQRPDGRWILDAVQPDLSAAAAKWYAEHPDQRPTPLAFETAGR
                     PSKMITLRALTVLSRVG"
     gene            430..915
                     /gene="dps"
                     /locus_tag="VNA10_04590"
                     /gene_synonym="pexB"
     CDS             430..915
                     /gene="dps"
                     /locus_tag="VNA10_04590"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: protein motif:HMM:NF006975.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HVG36988.1"
                     /translation="MERAKRSKEGAALNRSVQERLVRGLNLNLANMTSLATAYKQAHW
                     NLQGPGFAQLHELFDRFADQTRVYADLVAERAVQLHGTSHGTIEGAVKETTLPPFPLD
                     EHREDLLVAALVERANAAIFEVRHGIDGSEDDLPTQDVYIEIARGLEKQEWMLRSHLT
                     G"
BASE COUNT          210 a          340 c          358 g          196 t
ORIGIN      
        1 tgcggagtac tatctcgagc acgaactcca cgtccagggg gaacggtacg agccgtggta
       61 ccgcttccac tggcccgtcc actactacta cgacctcctg gttggcctcg actgtctgac
      121 cgcgctcggc tatgggaagg accgtcgact cgggtacgcg ctcgacctcc ttcgcaagaa
      181 gcagcggccc gacgggaggt ggatcctcga cgcggtgcaa ccggacctga gcgcggcggc
      241 ggccaaatgg tacgcggagc atccggacca gcgaccgacc ccgctcgcgt ttgagaccgc
      301 cggccgcccg agtaagatga tcacactccg ggcgctcacg gtcctgtccc gggtcggttg
      361 atgccgctcg cggcggaacg caaccctcat gcggcgtttg gccatagcga tggcggttgg
      421 atggattcca tggaacgcgc aaaacgaagc aaggagggag cggcattgaa ccggagcgtc
      481 caagaacggc tcgttcgggg actgaacttg aatctggcga acatgacatc cttggcgact
      541 gcctacaaac aggcccattg gaacctgcaa ggacctggat tcgctcagct tcatgaactg
      601 ttcgaccgct tcgcggacca gacgcgagtg tatgccgacc tcgtggccga acgcgcggtt
      661 cagctccacg ggacgtcgca cgggacgatc gagggggccg tcaaagaaac gacgcttcca
      721 cccttcccgc tggacgaaca tcgggaggac cttctcgtgg cggcgctcgt cgagcgcgcc
      781 aacgcggcga tcttcgaggt tcgacacgga atcgacggca gcgaagacga tcttccgacc
      841 caggatgtgt acatcgagat cgcccgcggt ctcgagaagc aggaatggat gctgaggtcc
      901 cacctgacgg gatgaacggt cggtcgccgg gcttccgagc ggcggttcgt gtcgtcgttc
      961 acccggacgg agggtgattt ctttcggtcg tcagactgct cgattctttt gtgtggcgtc
     1021 gggatcactt tcttcccgaa cctcgatggc ggggacggtc gcgagaaata tccggagtcc
     1081 cggcgacccg tagaccgcga gctt
//
LOCUS       DATLMA010000360         1458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_579171, whole genome shotgun sequence.
ACCESSION   DATLMA010000360 DATLMA010000000
VERSION     DATLMA010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579171"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VNA10_04595"
     CDS             complement(<1..294)
                     /locus_tag="VNA10_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HVG36989.1"
                     /translation="MPELYDTAAAPATFRRRLLSWYRRAGRDLAWRRTRDPYRVLLSE
                     VMLQQTQVSRVLPAYRRFLRRFPTLRALSRAPLGEVLREWSGLGYNRRARDLHR"
     gene            399..869
                     /gene="greA"
                     /locus_tag="VNA10_04600"
     CDS             399..869
                     /gene="greA"
                     /locus_tag="VNA10_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013119145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HVG36990.1"
                     /translation="MNNLEKPVYVSADGLKKIHSELDELKAAGRQRVAERIHAAMEFG
                     DFTENSELEQAKNDQAFLEGRILTLEQMVKNAQIIDEKTKHDLVEVGSHVTVEADGQK
                     EKYVIVGSAEASPAEGKISNESPVGRALQGHRAGETVKVSVPAGTMEMKILAVS"
     gene            890..>1458
                     /locus_tag="VNA10_04605"
     CDS             890..>1458
                     /locus_tag="VNA10_04605"
                     /inference="COORDINATES: protein motif:HMM:NF014031.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HVG36991.1"
                     /translation="MTARGSEQGHQARFWADEEADLLAPDREHVIRDSKTPSGDVLIS
                     NLRGPIITDALHRTFKKRGLRIRYIFTIDDYDPMDSQSMKEKAAWAEHMGKPFAHIPS
                     PEPSEASDFARYYASRFLATFEGLGIRPEEIHWMRDLYRSGQLDKQIDLVLRNAATIR
                     EIYARVANVKKDERWLPIGVICENCRRLGT"
BASE COUNT          297 a          451 c          500 g          210 t
ORIGIN      
        1 ccggtgcagg tctcgcgcgc gccggttgta cccgaggccc gaccactcgc gcagcacctc
       61 accgagcggc gcgcgcgaga gcgcgcggag tgtgggaaac cgccgcagga agcgtcggta
      121 cgccggaaga acgcgcgaga cctgcgtctg ctggagcatg acctcgctca acaggacgcg
      181 gtacggatcg cgtgtgcgcc gccacgcaag gtcgcggccg gcgcggcggt accaggagag
      241 gaggcgcctg cggaacgtcg ccggagcggc cgctgtgtcg tacaattccg gcacagaaga
      301 gtacgcccgg ttgagtgctg agggccttcg gccttcagcg cttttcattg aagggcacgc
      361 acgggaagaa accgtgcgca cagagagcgg aggctccgat gaacaacctt gaaaagcctg
      421 tctacgtctc cgcggatggt ctgaagaaga tccattccga gctcgacgaa ttgaaggccg
      481 ccggccgtca gcgcgtggcg gagcggattc acgcggccat ggagttcggg gacttcacgg
      541 agaactccga gctcgagcaa gcgaagaacg atcaggcgtt cctcgaaggt cgcatcctca
      601 cgctcgagca gatggtcaag aacgctcaga tcatcgacga gaagacgaag cacgatctcg
      661 tcgaggtggg cagccacgtg acggtcgagg ctgacggcca aaaagagaag tacgtcatcg
      721 tcggatccgc ggaggcgtcg ccggcggagg gcaagatcag caacgagtcg cccgtcgggc
      781 gcgcgctgca gggtcaccgc gcgggcgaga cggtgaaagt ttccgtgccc gcgggcacga
      841 tggaaatgaa gatcctggcg gtcagttgag cgtagagtcc agcgcgagcg tgacggccag
      901 agggtcggaa caaggacacc aggcgcgatt ctgggcggac gaggaggccg atctcctcgc
      961 ccccgatcgc gagcatgtga tccgcgactc gaagacgccg tccggtgatg tgctcatctc
     1021 gaatctgcgc ggtccgatca tcaccgacgc gctccaccgg accttcaaga agcgcggcct
     1081 gcgcatccgc tacatcttca caatcgacga ctacgacccg atggactcgc agtcgatgaa
     1141 agagaaggcg gcctgggcgg agcacatggg caaaccgttc gcccacatac cgtcgccgga
     1201 gccgtcggag gcatccgact tcgcgcgcta ttacgcgtcg cggttcctcg cgaccttcga
     1261 agggcttggc atccgccccg aggagatcca ctggatgcgg gacctctacc gctcggggca
     1321 gctggacaag cagatcgacc tcgtgctgcg gaacgccgcg acgatccgcg agatctacgc
     1381 ccgcgtcgcg aacgtcaaga aggacgagcg ctggctgccg atcggcgtga tctgtgagaa
     1441 ctgccgccgc ctggggac
//
LOCUS       DATLMA010000361         1174 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_878756, whole genome shotgun sequence.
ACCESSION   DATLMA010000361 DATLMA010000000
VERSION     DATLMA010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878756"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..909)
                     /gene="infB"
                     /locus_tag="VNA10_04610"
     CDS             complement(<1..909)
                     /gene="infB"
                     /locus_tag="VNA10_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012571908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HVG36992.1"
                     /translation="MASIRQPIVSVLGHVDHGKTTLLDRIRGTGVAGREAGGITQHIG
                     ATEVPLAAILDMCGDLVKGRSFRIPGLLFIDTPGHVAFSTLRARGGALADLAVLVIDV
                     NEGFRPQTIESLNILRRYKTPFVVAANKIDMVPGWRKHEGQPFVRSYQDQPDSAREEL
                     DRRMYELVGRLFEHGFSADRYDRIEDFTTNLAVIPVSAKFGEGIPDLLLTLIGLAQRF
                     LGEQLATAEGPAVGTILEVREEKGVGTTLDAIIYEGTLSKGETIVFGTAGKPGTTKVK
                     ALLKPKPLDEIRDPQERFDSVKSASAA"
     gene            complement(970..>1174)
                     /locus_tag="VNA10_04615"
     CDS             complement(970..>1174)
                     /locus_tag="VNA10_04615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012037332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HVG36993.1"
                     /translation="AVRKMMGKTNSAEAEPGTIRGDLALTIGRNVIHGSDSAESAKRE
                     ISLFFKLDEIHTYTRVDEAWLRE"
BASE COUNT          187 a          387 c          380 g          220 t
ORIGIN      
        1 ggccgcggat gcactcttga ccgaatcgaa ccgctcttgc gggtcccgga tctcgtccaa
       61 gggcttcggc ttcagcaggg ccttcacttt cgtcgtccct ggctttcctg cggtcccgaa
      121 gacgatcgtc tcgcccttcg agagcgtgcc ctcgtagatg atcgcgtcca gcgtggtccc
      181 gacgcccttt tcctccctga cctcgaggat cgtgccgacc gcaggcccct cggcggtcgc
      241 cagttgctcc cccaggaacc gctgggcgag gccgatcaag gtcagcaaca agtccgggat
      301 gccttcgccg aacttcgcgc tgaccgggat gaccgccagg ttcgtcgtga agtcctcgat
      361 tcggtcgtag cggtccgcgg agaatccgtg ctcgaagaga cggccgacga gctcgtacat
      421 gcgccggtcg agttcctcgc gggcggagtc gggttgatct tggtacgagc ggacgaacgg
      481 ctggccctcg tgcttccgcc agcctggcac catgtcgatc ttgttcgccg cgacgacgaa
      541 cggcgtcttg taccgccgca ggatgttcag gctctcgatc gtctgcggcc ggaatccttc
      601 gttgacgtcg atcacgagga ccgcgagatc cgcgagcgct ccgccgcggg cccgcaacgt
      661 cgagaaggcg acgtggcccg gcgtgtcgat gaagaggagg ccggggatcc ggaacgatcg
      721 gcccttgacg aggtccccgc acatgtcgag gatcgccgcg agagggacct ccgtcgctcc
      781 gatgtgctgg gtgatcccgc ccgcctcgcg gcccgcgacg ccggtgccgc gaatccggtc
      841 gaggagggtc gtcttgccat ggtccacgtg tcccaagacg gacacgatgg gctggcgaat
      901 ggaggccatc gccgccggac caagaaacca acgctattag aaggttggcc cctccgatgg
      961 tcggcgagtc tattcccgca accaagcctc gtcgacccgg gtgtacgtgt gaatctcgtc
     1021 gagtttgaag aacagcgaga tctcgcgttt cgcgctctcc gccgagtcgg aaccgtggat
     1081 cacattgcga ccgattgtga gcgcgagatc cccgcgaatg gtgcccggtt cggcctccgc
     1141 ggaattggtc ttccccatca tcttgcggac ggcg
//
LOCUS       DATLMA010000362         1002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_823727, whole genome shotgun sequence.
ACCESSION   DATLMA010000362 DATLMA010000000
VERSION     DATLMA010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823727"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VNA10_04620"
     CDS             <1..548
                     /locus_tag="VNA10_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG36994.1"
                     /translation="EFSHMRLFHEMFRTFRLDNVQWVPLGKWMGRMYRLFPRFPEAFM
                     APPAFVTELMGLTVYQHIDGALDKILADEPKARDRVRELLREIMTDELAHVGQRRNFM
                     GPIGLGAARLFVEPMYRAFFRDLPETRLLFDLDHMVRDGKTFDYSAIAPEMIEKSWVP
                     SYCKTLPRSEDGSRFDNLRRG"
BASE COUNT          176 a          316 c          310 g          200 t
ORIGIN      
        1 aggaattcag ccacatgcgc ctctttcatg agatgttccg gacgttccgc ctcgataatg
       61 tgcaatgggt cccgctcgga aaatggatgg gccgcatgta ccgactcttc ccacggttcc
      121 cggaggcgtt catggcccca cccgccttcg tgactgagct gatgggactg actgtgtatc
      181 agcacatcga tggcgccctc gacaagattc tcgccgatga gccgaaggcc cgcgatcgcg
      241 tccgcgagct cctgagagag atcatgaccg acgagctcgc ccacgtcggg cagcgtcgca
      301 acttcatggg gccgatcggt ctgggtgcgg cccgcctgtt cgtcgagccg atgtaccgtg
      361 cattcttccg cgatctcccc gagacgaggt tgttgttcga cctcgaccac atggtccggg
      421 acgggaagac gtttgactac agtgccatcg cgcccgagat gatcgagaaa agctgggtcc
      481 cgtcgtattg caagacgttg ccgaggtctg aagatggtag ccgcttcgac aacctacgga
      541 gggggtagca gccgtgctag cctgagaatc tcgcctcacg aaaggcggga gcgtcgttga
      601 gcaaacgcct tcggtgtggg agccacacgt cggggcgttg ttatctcaga agacccaata
      661 ggcggcctcc ccttatccct tccgtcttga ccgcttcctg gccctgtcag ttttgtcggt
      721 caccggtcat ccctcgcgat cttctgcgag aacagcggag cggtaaggtg agcgggcagc
      781 gcggctcacc cacgcgatcg ccgtgacggc gcgggaggca gaggcgctcg ctccactggc
      841 gcggagtcgc ccgggattgg ccggagcgcc ggctccatca cgacccggac cgcggtgcgg
      901 aagactcctc cactcgcgtc catcgccact caccgcctgt tgagttcttt gatgcctcac
      961 ccgggttttg ggtctctaac gcggtgcgta gagaactacc gc
//
LOCUS       DATLMA010000363         2233 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_761326, whole genome shotgun sequence.
ACCESSION   DATLMA010000363 DATLMA010000000
VERSION     DATLMA010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761326"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(467..844)
                     /locus_tag="VNA10_04625"
     CDS             complement(467..844)
                     /locus_tag="VNA10_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012890964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HVG36995.1"
                     /translation="MTDLLDVGLWIVQALLAVVFLLAGAMHAFRYEAAKKNLPWVKDL
                     PRGVVILDGAVEILGALGVILPRLTGILPVLTPLAAAGLALIMAVAITLHVRRKESRA
                     VGVTGLLFLMAAFVAYGRWFLVP"
     gene            1058..>2233
                     /gene="thsB"
                     /locus_tag="VNA10_04630"
     CDS             1058..>2233
                     /gene="thsB"
                     /locus_tag="VNA10_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HVG36996.1"
                     /translation="MPAGTQILVLREGTRREQGKGAQFNNIAAAKAVADAVRSTLGPR
                     GLDKMLVDSLGDVVITNDGVTILKEIDVTHPAAKMIVEVAKTQDEEAGDGTTTAVVLA
                     GELLKKAENLIEQDIHPTVIAAGYRQAAEKAREILEKVATKISIKDADVLKKVAMTAM
                     SSKSASGHKELLADISVKAVTAVAEQRADGTYFVDEDNIQVVKKQGGSIANSELVDGI
                     IVDKERVHPGMPAEVKDAKIALIDAALEVKKPEIDAKIEITDPTQLQAFLNEEEAMLK
                     RMVETVRKSGANVVFCQKGIDDLAQHYLAKEGIYAVRRVKKSDMEKLAKATGGKLVTK
                     LDELAKDDLGFAKLVHEKKIAADEMTFVTGCKNPRAVSILLRGGTEHVVDELERSVED
                     "
BASE COUNT          470 a          678 c          704 g          381 t
ORIGIN      
        1 ggagtctggt tcagccttgc ggacaaggct tattgttccc cgtgtttcca cgctcatttc
       61 tggactccct tccaaagtgt ccccaggtaa ggcccattga cctcctcttg gacacggaag
      121 ggaggtggaa gcgggagcac cgtcgagtcc gttcgcccct cgtgatcaag gtttccgcaa
      181 cgtcaaggga tgatctcgga tcccgtgagc gtctgccgga acttcatacc gtccacctcg
      241 acgacgtcgc cgtctggaat ccgttgtcgt cctcgtgttc atcggcgcag ttcctgtctt
      301 cgttggtatc gtctgcgtgc tcgttggcgt cgtttccgtg ccgatcgacg gcgttcccgt
      361 ccttctcccg cccgcggagc catgtccacc ccatgcacat cgtccctcct aaagactcgg
      421 tggggctccc gggcattcgc cggtcgtgca cctcgcgtgc aaaaggtcag gggaccagga
      481 accagcgacc gtacgctacg aaggccgcca taaggaacag gagtcccgtc acgccgaccg
      541 cacgggactc cttgcgtcga acgtgaaggg tgatggcgac cgccatgatg agagccagac
      601 ccgccgcggc cagaggggtc agtacgggca ggatgcccgt gagccgtggc aggatgacgc
      661 ccagcgcgcc gaggatttcc acggcgccgt ccaatatgac gaccccgcgg gggagatcct
      721 tcacccatgg aagattcttc ttggccgctt cgtagcggaa cgcgtgcatg gcgcctgcca
      781 agaggaagac gaccgccaga agggcttgga cgatccagag cccgacatcc aggaggtcgg
      841 tcacggaaac cccccgctca atcccgttgg gtcggactcg tcagatatgt cgctctccct
      901 ccttttccgg catgcgtcag cggcgcataa agcgcgtacc tcgcggtctc tgcccgcgat
      961 ggtcacgggg acaagcggca gaccgtagac gatacgctta tccggagtcc aaccctagtt
     1021 atcaagccga atctcacgtt cggaggaatt ttccatgatg ccagcaggaa cacagattct
     1081 ggtcttaaga gagggtacgc gccgcgagca agggaaggga gcgcagttca acaacatcgc
     1141 ggccgcgaag gccgtcgcgg acgcggtgcg atccacgctg gggccgcgcg gcttggacaa
     1201 gatgctcgtc gacagcctcg gagacgtcgt catcacgaac gacggcgtca cgatcctcaa
     1261 ggagatcgat gtcacgcatc ccgcagcgaa gatgatcgtc gaggtcgcga agacccagga
     1321 cgaggaggcc ggggacggta cgacgactgc ggtcgtcctc gcaggggaac tactgaagaa
     1381 ggcggagaat ctcatcgagc aggacatcca tccgaccgtg attgccgccg ggtaccgcca
     1441 ggcggccgag aaggcccgcg agatcctgga gaaggtcgca acgaagattt cgatcaagga
     1501 cgcggacgtc ctgaagaagg tcgcgatgac cgcgatgtca tcgaagtccg cgagcggcca
     1561 caaggagctt ttggccgata tctccgtcaa ggccgtcacg gcggtcgcgg agcagcgcgc
     1621 cgacggcacg tacttcgtcg acgaagacaa catccaagtt gtcaagaagc agggtggctc
     1681 catcgcgaat tcggagctcg tcgacggcat catcgtcgac aaggagcgcg tgcaccccgg
     1741 catgcccgcc gaggtgaagg acgcgaagat tgccttgatc gatgcggccc tcgaagtcaa
     1801 gaagccggag atcgacgcga agatcgagat cacggacccg acgcagctcc aggctttcct
     1861 caacgaagag gaagcgatgc tgaagcgaat ggtcgagacc gttcggaaga gcggcgccaa
     1921 cgtcgtattc tgccagaagg ggatcgacga tctcgcacag cactacttgg ccaaggaggg
     1981 catctacgcg gtccgccgcg tcaagaagtc cgatatggag aaactcgcaa aggccacggg
     2041 tggcaagctc gtcacgaagc tcgatgagct ggccaaggac gacctcggct tcgccaagct
     2101 cgtccacgag aagaagatcg ccgcggatga gatgaccttc gtcacgggct gcaagaaccc
     2161 gcgcgcggtc tcgattttgc tccggggtgg tacggagcac gttgtggacg aacttgagcg
     2221 ctccgtcgaa gac
//
LOCUS       DATLMA010000364         5499 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_278372, whole genome shotgun sequence.
ACCESSION   DATLMA010000364 DATLMA010000000
VERSION     DATLMA010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5499
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278372"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2049
                     /locus_tag="VNA10_04635"
     CDS             <1..2049
                     /locus_tag="VNA10_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010917307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor EF-2"
                     /protein_id="HVG36997.1"
                     /translation="ELAGQQLFMDYDEQEQARGITINAAIASMVHDFEGGQYLINLID
                     TPGHVDFGGDVTRAMRAIDGVIILVDSVEGIMPQTETVIRQALKERVRPALFINKVDR
                     LVNELKISQEQMQQRFAKIITEVNNRIRKWLPEDMGEKWMVNVEAGSVAFGSAYHKWA
                     VSAPFTKRTRIGFKDVYKHCQEGTMKELAKKAPLHNVVLNMVIRHLPNPLEAQKVRIP
                     IIWKGDMESPVGKAMLSVDENGPVGFMVTKIIVDPQAGEVAAGRLFSGKIRRGQELWV
                     IGMPKPQRAQTVAMIVGPDRIPVDEIDAGNVVAVVGLKDAIAGSTVSDDKEMQTFEKI
                     VHYSDPVVTIAVEAKSTSDLPRLVEALRLIAKADPSIVVEINQETGEHLISGMGELHL
                     EITIYRVQNDYKIPVTTSPPIVVYREGVRDKGGPFEGKSPNKHNRFYMEVEPLEDKVV
                     QAIRSGEIASGQRIKDSKALAKKLEELGMERNESKNVVWIQDTNMLLDATKGIQYLHE
                     TMELIKEAYIEAMGKGPLAGEKAMGLKVRLVDAKLHEDSVHRGPAQVIPAARSSIYGA
                     MVQGGRILLEPIQKVFINVPQDFMGSALGEIQSRRGVIEDITQEGEITVIHAKAPVAE
                     MFGFASAIRSATQGRALWSTENSGFEAVPGNLQSEVVRAIRTRKGLPPEPYDEAYYAA
                     "
     gene            2204..3475
                     /gene="tuf"
                     /locus_tag="VNA10_04640"
     CDS             2204..3475
                     /gene="tuf"
                     /locus_tag="VNA10_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010900871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor EF-1 subunit
                     alpha"
                     /protein_id="HVG36998.1"
                     /translation="MPAKPHLNLVFIGHVDHGKSTTVGRILYDTGNIDPHELENLKKL
                     AEQMGKATFEFAFVMDQVKEERERGLTIDVAHKRFDTDKYYFTIIDAPGHRDFVKNMI
                     TGTSQADAAVLVVGAAEGVQTQTKEHIYLAKVLGVEQIIVAINKMDAAKPEYSEKRFT
                     ELKTELTGLLKVSGFKVDRIPFIPISSYKGENITKPSSKMGWYKGPSLVPALNDLTVP
                     PKPTNLPLRLPVQDVYSITGAGTVPVGRVETGLLKVGMKIHFMPSDKIGEVKSIEMHH
                     EQIPQAEPGDNVGFNVRGVDKKDLRRGDVAGPTDNPPTVAKTFTAQIVVLNHPSVITA
                     GYTPVFHAHTAQVAGTFEEIIAVLDPKTGAPKAEKPDFLKTGDAARVKIRPTKPLVIE
                     AFKAFPQMGRFAVRDMGQTVAAGQVIDVEKR"
     gene            3513..3824
                     /gene="rpsJ"
                     /locus_tag="VNA10_04645"
     CDS             3513..3824
                     /gene="rpsJ"
                     /locus_tag="VNA10_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011177217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HVG36999.1"
                     /translation="MPQKARISLSGTDPKKVDNVCQQIKLISERTGVAMAGPIPLPTK
                     RLLVPVRKSPDGEGSETWDRWEMRIHKRLIDLDADERALRQLMRIQVPDGVNIEIVLR
                     S"
     gene            3885..4547
                     /locus_tag="VNA10_04650"
     CDS             3885..4547
                     /locus_tag="VNA10_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37000.1"
                     /translation="MIRARTILSVAAIALLLGDGAFALFLTVTAAPHPAALTIDGTFP
                     DYSGGRLGSNSSNRIALAFEIATMLPWYRGEVQAPSVALTAQPGPGVRLVEPTTLSVK
                     LQRWDAGIRTTLAGDREVLTPAVPGRWTTANTPMRISPNADVAGSSFFLAVTLNLTVT
                     YQDGSSYGIGGWEPNARTTFFDIRTDVAPFGAATLVAGGIGTALMVVPRRRGRRPALR
                     QV"
     gene            complement(4584..5087)
                     /locus_tag="VNA10_04655"
     CDS             complement(4584..5087)
                     /locus_tag="VNA10_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37001.1"
                     /translation="MGRVAERALRWFVGLSLLVGGLVLLGGAIQFGTLGGPIWVIPLA
                     GVVAAVLAVLTGATEGGPRSPILPASAWIVSVLLGILWARLDPAGHAFLSGYAAIVAF
                     GTGIGILRRQLWAWPVALASVVGFGPIVLVLVTQLPTAAVVAGFVLFLVDAVALLAIH
                     RSYFGPQ"
     gene            5186..5257
                     /locus_tag="VNA10_04660"
     tRNA            5186..5257
                     /locus_tag="VNA10_04660"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5218..5220,aa:Ala,seq:tgc)
BASE COUNT         1142 a         1758 c         1776 g          823 t
ORIGIN      
        1 gagctcgcgg gccagcagct cttcatggac tacgacgaac aggagcaggc ccgcggaatc
       61 acgatcaacg ccgcaatcgc gtcgatggtc cacgacttcg agggcggcca gtatctgatc
      121 aacctcatcg atacgcccgg ccacgtggac ttcggcggcg acgtcacgcg cgcgatgcgc
      181 gccatcgacg gcgtgatcat cctcgtcgac tcggtcgaag ggatcatgcc gcagacggag
      241 accgtcattc gccaggcgct caaggaacgc gtgcggcccg ccttgttcat caacaaggtc
      301 gaccgcctcg tgaacgaact caagatttcg caagagcaga tgcaacagcg attcgcgaag
      361 atcatcacgg aagtcaacaa ccgcatccgc aaatggctcc ccgaagacat gggggagaag
      421 tggatggtga acgtggaggc gggcagcgtt gcattcggga gcgcatacca caaatgggcg
      481 gtcagcgccc cgttcaccaa gcggacccgc atcgggttca aggatgtcta caagcactgc
      541 caagaaggca cgatgaagga gctcgcgaag aaggcgcctc tccacaacgt cgttctgaac
      601 atggtcatcc gccacctgcc gaatccgctc gaggcccaga aggtccgaat cccgatcatc
      661 tggaagggcg acatggagag ccccgtgggc aaggcgatgc tgtccgtcga cgagaacggc
      721 ccggtggggt tcatggtcac gaagatcatc gtcgatccgc aggctggaga agtagctgcg
      781 ggccgtcttt tctccgggaa gatccgccgc ggtcaagagc tctgggtcat cggcatgccg
      841 aaacctcagc gcgcgcagac ggtcgcgatg atcgtcggcc cggaccggat tcccgtcgac
      901 gaaatcgatg ccggcaatgt tgttgcggtc gtcggactga aggacgcgat cgctggctcg
      961 acggtgagcg acgacaagga aatgcagacg ttcgagaaga tcgtccacta ctccgacccg
     1021 gtcgtgacaa tcgcggtcga agcgaagtcg acatcggatc tcccgaggct cgtcgaggcc
     1081 ctccgcctca ttgcgaaggc ggacccgagt atcgtggtgg agatcaatca ggagaccgga
     1141 gagcacttga tctccggcat gggcgagctc cacctcgaga tcacaatcta tcgcgtccag
     1201 aacgactata agattccggt cacgacgagc ccgccgatcg tcgtgtaccg cgagggcgtc
     1261 cgcgacaagg gcggtccgtt cgaaggcaag tcgccgaaca agcacaaccg gttctacatg
     1321 gaggtcgagc cgctcgagga caaagtcgtc caggcgatcc ggagcgggga gatcgcgtcc
     1381 gggcagcgga tcaaagactc gaaggccctc gcgaagaagc tcgaggagct cggcatggaa
     1441 cgcaacgagt ccaagaacgt cgtctggatt caggatacga acatgcttct cgatgcgacg
     1501 aagggcatcc agtacctcca cgagacgatg gagctgatca aggaggcgta catcgaggcg
     1561 atggggaagg gacccctcgc gggggagaag gcgatggggc tcaaggtgcg gctcgtcgac
     1621 gcgaagctcc atgaggactc ggtccaccgc gggcctgccc aggtgatccc tgcggcgcga
     1681 tcgtcgatct acggtgcgat ggtccagggc ggccgaatcc tgctcgagcc gatccagaag
     1741 gtcttcatca acgtccccca ggacttcatg gggtccgcgc tcggggagat ccagagccgc
     1801 cgcggcgtga tcgaggacat cacgcaggag ggcgagatca cggtcatcca cgcgaaggcg
     1861 cccgtcgcgg agatgttcgg gttcgcgtcc gccatccgct ccgcgacgca aggccgcgcc
     1921 ctgtggtcga cggagaacag cggcttcgag gcggtgcccg gcaacctgca gtcggaggtc
     1981 gtccgagcga ttcgcacacg caagggcctt ccgccggagc cgtacgacga agcgtattac
     2041 gcggcgtgaa gcgcgcaacg agcggacgaa atcggagacg cgttcgccgc gccgacatgc
     2101 attcgaactg caatttccag atgagaatcg gcgcgcgaca acgtgtcagt ggaaagagtc
     2161 atatacgaca ggatgatagg gtgcgaccta cagggtagaa accatgcccg cgaagccaca
     2221 cctcaacctc gtgttcatcg gccacgtcga ccacgggaag tcgacgaccg tcggccggat
     2281 cctctacgac accgggaata tcgacccgca cgaactcgag aatctcaaga agctcgccga
     2341 gcagatgggc aaggccacgt tcgagttcgc gttcgtcatg gaccaggtca aggaagagcg
     2401 cgagcgcggc ctgacgatcg acgtcgcgca caagcgcttt gacacggaca agtactactt
     2461 cacgatcatc gacgccccgg gccaccggga cttcgtcaag aacatgatca ccgggacgtc
     2521 ccaggccgat gccgcggtcc tcgtcgtcgg ggcggcggaa ggcgtgcaga cgcagacgaa
     2581 ggagcatatc tacctcgcga aggtcctcgg ggtcgagcag atcatcgtcg cgatcaacaa
     2641 gatggacgcg gcgaagccgg agtattccga gaagcgcttc accgagctga agaccgagct
     2701 gaccggattg ctgaaggtct cgggcttcaa ggtggaccgg atccccttca tcccgatcag
     2761 ctcgtacaag ggtgagaaca tcacgaagcc gtcgtccaag atggggtggt acaaaggccc
     2821 ctccctcgta ccggccctca acgacctgac ggtgccgccg aagccgacga acctcccgct
     2881 ccgcctcccg gtccaggacg tctactcgat cacgggcgcg ggcaccgtgc cggtcggccg
     2941 ggtcgagacc ggcctcctga aggtcgggat gaagatccac ttcatgccct cggacaagat
     3001 cggcgaggtc aagtcgatcg agatgcacca cgagcagatc ccgcaggcgg agccgggcga
     3061 caacgtcggc ttcaacgtcc gcggggtcga caagaaggac ctccgccggg gcgacgtcgc
     3121 cggaccgacg gacaaccccc cgacggtcgc aaagaccttc accgcgcaga tcgtcgtcct
     3181 gaaccatccg agcgtcatca cggccgggta cacgccggtc ttccacgcgc acacggccca
     3241 ggtcgcaggc accttcgagg agatcatcgc ggtgctcgat ccgaagacgg gcgcgccgaa
     3301 ggccgagaag cccgactttc tcaagaccgg cgacgcggcc cgcgtcaaga tccgaccgac
     3361 aaaacccctc gtcatcgagg cgttcaaggc gttcccgcag atggggcgct tcgcggtccg
     3421 ggacatggga cagaccgtcg cggcgggtca ggtcatcgac gtcgagaagc gctgacgccg
     3481 tggccttctg tttcccctcg ccaggttgaa ccatgcccca gaaggcccgc atctcgctca
     3541 gcggcaccga cccgaagaag gtcgacaacg tgtgccaaca gatcaagctc atcagcgagc
     3601 gcaccggcgt cgcgatggcg gggccgatcc cgctgccgac gaagcggctc ctcgtacccg
     3661 tgcggaagtc tccggacggc gaggggagcg agacgtggga ccgatgggag atgcggatcc
     3721 acaagaggct catcgatctc gacgcggacg aacgcgcgct gcggcaactc atgcgcatcc
     3781 aggtgccgga cggcgtcaac atcgaaatcg tgttgcgaag ctgagcgcct gcgcgaccgg
     3841 cttcgagaac gttcaatacc tgagcagcgt attttcgagg acgcatgatt cgggccagga
     3901 cgatcctctc ggtcgcggca atcgccctcc tcctcggaga cggcgcgttt gcgctcttcc
     3961 tgacggtcac cgccgcgcca catcccgccg cgctgacgat tgacggaacg ttccccgact
     4021 actctggtgg ccgcctcggg tcgaacagtt ctaaccggat cgcccttgct ttcgagatcg
     4081 cgacgatgct gccgtggtat cgaggcgaag tccaggcccc gtcggtcgcc ttgacggcgc
     4141 aaccgggacc gggggtgcgc ctcgtcgagc caaccaccct ttccgtcaaa ctgcagcggt
     4201 gggacgccgg gatccggacg acgctcgcgg gggatcgcga agtcctgacc cccgcagtac
     4261 ccggccgatg gacgaccgcg aacacgccga tgcgtatctc gccgaacgcg gacgtggccg
     4321 gctcgagctt cttcctggca gtcacgctga acttgaccgt cacgtaccag gatggctcga
     4381 gctacgggat tggcggatgg gagcccaatg cgcgcacgac gttcttcgac atccggacgg
     4441 acgtcgctcc gttcggagcc gcgacccttg tggccggtgg gatcggaacg gccctcatgg
     4501 tggtcccccg gcgacgcggc cgacggcctg ctctccggca ggtatagtcc cgcgttcctt
     4561 cggagatcac cgcggagaag gaattactgc ggcccgaagt acgaccggtg gatcgcgagg
     4621 agcgcgaccg cgtcgacgag gaacaggacg aatcccgcga cgacggccgc cgtcggcagt
     4681 tgagtgacga ggaccaaaac tataggtccg aacccgacga ccgaggcgag cgcgacgggc
     4741 caggcccaca attgacgccg caagattccg atgccggtcc cgaaggcgac gattgccgcg
     4801 taaccgctca ggaacgcgtg gcctgcgggg tcgagacggg cccaaagaat cccgagcaag
     4861 acggacacga tccacgccga cgccggtagg atcggcgatc gtggaccccc ctccgtagcg
     4921 ccggtcagga cggccagcac cgccgcgacg acgccagcga gtgggatcac ccagattggc
     4981 ccaccgaggg tcccgaactg aatcgcgccg cctaggagga cgaggcctcc gaccaagagg
     5041 ctcagcccga caaaccatcg aagggctcgc tccgcgacac gacccatgct ccttcatctc
     5101 ccggacgcgg ataagcgtta agccggccgg accgcgaaat cctctcggaa agtttcatgt
     5161 gcgccgcgac gctgtgcgcg cgtcggggcc ggtagatcag cggaagatcg cctgctttgc
     5221 aagcaggaag tcctgggttc aaatcccagc cggtccacta ccagactcgg acgcgttttg
     5281 gccgaccggt ggcgattgcc ccctgttagt tcggcggcta acgttgggtg actcccgcct
     5341 ccaatggacg aatcaacgag ctggtcactg ctgcggagac cgaggagccg ggggcggcct
     5401 cttgtgtttg cgccgccacc gaaagacgac cacgcttcca accacgaggg cgatcgcaat
     5461 cgcggcgagg atcgcatagc cctccgcggc ggggaggcc
//
LOCUS       DATLMA010000365         1466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_401701, whole genome shotgun sequence.
ACCESSION   DATLMA010000365 DATLMA010000000
VERSION     DATLMA010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401701"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VNA10_04665"
     CDS             <1..501
                     /locus_tag="VNA10_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37002.1"
                     /translation="DPDSHVAFQGLRRRLGIHPEQLSRALHRLADSELVERTDLGYRV
                     SRRALGFLSPVALKPAGPGATILQTSLPAHVDLRGLVGALRGTWIGPLRWYGFSEADE
                     GLRLGWALEDDSIGIEILVRPGQLTMTAKVDSSSRLDEATRLGYELFHHVSREISSNT
                     DRGISA"
     gene            610..1185
                     /locus_tag="VNA10_04670"
     CDS             610..1185
                     /locus_tag="VNA10_04670"
                     /inference="COORDINATES: protein motif:HMM:NF012452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit beta"
                     /protein_id="HVG37003.1"
                     /translation="MTTTVGIRSKDGVVLAADKRASKGFFVGSKVVQKIFSLDGATAV
                     AIAGAMSDAEYLVNLAKAERRLLALRRGYPVSVKESAKLISNIVYSSMKSYNPFYVEL
                     VVAGVDHDGPHVYTSDMSGAITSEDFMSSGSGSPIAYGVLEQGFRKDASLDETSKLAE
                     AAVRAAMERDPGSGNGVDVLAIPNGHSLEVN"
     gene            1186..>1466
                     /locus_tag="VNA10_04675"
     CDS             1186..>1466
                     /locus_tag="VNA10_04675"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: protein motif:HMM:NF012452.4"
                     /note="cleaves peptide bonds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit alpha"
                     /protein_id="HVG37004.1"
                     /translation="MATEMGRMPFFYNQEGRLVQVDYALQAVSRGSTTIGLKTKDFAV
                     LSSQVKPTRPLMEPAEKVFVVDEHIGATGSGYIGDVTTLLDQLRVAAQR"
BASE COUNT          268 a          473 c          484 g          241 t
ORIGIN      
        1 gatccggatt cgcacgtcgc gttccagggt ctgcggcgtc gactgggcat ccatccggag
       61 caactttccc gggccctcca tcgactcgcc gacagcgagc tcgtggagcg gacggacctc
      121 gggtaccgcg tctcgcgacg cgccctcggc ttcttgagtc cggtcgctct caagcccgcc
      181 ggaccgggcg cgacgattct ccagacctcg ctcccagctc atgtcgacct ccgggggctc
      241 gtaggtgcgc tccggggcac ctggatcggc ccgctgcgtt ggtacgggtt ttcggaggca
      301 gacgaaggcc tccggctcgg ctgggccttg gaggacgaca gcatcggaat cgagatcctc
      361 gtccggccgg gtcagctcac gatgaccgcg aaggtggact cgtcaagccg actcgacgag
      421 gcgacccgac tcggctacga gctgttccac cacgtgtcgc gagagatctc ctcgaacacg
      481 gatcgcggaa tcagcgcgtg agtcgatctt ccccgatttg ccatccgacc gggcctcatg
      541 ccgtgtgact gacaactcgc aattcgagtc aacatacccg accgcccaca taagggtccg
      601 aggttcaaca tgaccacgac agtgggcata cgaagcaagg acggcgtcgt cctcgcggcg
      661 gacaagcgtg cctcgaaggg gttcttcgtc ggatcgaagg tggtccagaa gatcttctcc
      721 ctcgatggcg cgaccgcggt ggcgatcgcc ggtgcgatgt cggatgcgga atacctcgtg
      781 aacctggcga aggccgaacg acggctcctc gccttgcgtc gcgggtaccc cgtctccgtc
      841 aaggagagtg cgaagctgat ctcgaacatc gtctactcgt cgatgaagag ctacaacccg
      901 ttctacgtgg agctcgtcgt cgccggggtg gaccacgacg gcccgcacgt gtatacgagc
      961 gacatgagcg gcgcgatcac ctcggaggac ttcatgtcct cggggagcgg ttcgccgatc
     1021 gcgtacggcg tcctcgagca gggattccgc aaggacgcct cgctcgacga gacgagtaag
     1081 ctcgcggaag cggccgtccg cgcggcgatg gaacgcgatc cgggcagcgg caacggggtg
     1141 gacgtgctcg cgatcccgaa cgggcactcg ctggaggtga actagatggc gacagaaatg
     1201 ggacggatgc cgttcttcta caaccaggaa ggccggctcg tccaagtgga ctacgccctc
     1261 caggcggtca gtcgcggatc gacgacgatc ggcctgaaga ccaaagactt cgccgtgctc
     1321 tcgagccaag tgaagccgac gcggcccctc atggagcccg ccgagaaggt cttcgtcgtg
     1381 gacgagcaca tcggggcgac cgggagcggg tacatcgggg acgtgacgac gctcctcgac
     1441 cagctgcggg tcgccgcgca acgcca
//
LOCUS       DATLMA010000366         2443 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_823959, whole genome shotgun sequence.
ACCESSION   DATLMA010000366 DATLMA010000000
VERSION     DATLMA010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823959"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1031
                     /locus_tag="VNA10_04680"
     CDS             <1..1031
                     /locus_tag="VNA10_04680"
                     /inference="COORDINATES: protein motif:HMM:NF039832.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37005.1"
                     /translation="EEVVEEELPREEPKEPGPRPPIVRLKVFQAKKPALMDLCKAYDL
                     DPTGTKEQLRERLLSYLDTLESAAEPESAAESEAPTGPDPNEQPGIESESFHTPEEIA
                     ETPAGEEEPESEQPASATPSAETPVVEAQTTREPVAERIETPSFVSFPQSQPVVSDAP
                     VVEPMRALHPCPTCGRELTYIARYRRWYCYHCRAYAPVSESKFACPTCGAALRWIRQY
                     ERWWCDSCRRYAPADLPRPESAAVVTGVDTATPAEVAKPLYYATASSATTVTHRHRSP
                     GSGIGFVAFGVILFVLYEMLVDLPAALSYRTGIAVAADLAFGLRFFAFVFVALGAIMG
                     LSAVRDRR"
     gene            1075..2091
                     /locus_tag="VNA10_04685"
     CDS             1075..2091
                     /locus_tag="VNA10_04685"
                     /inference="COORDINATES: protein motif:HMM:TIGR01210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archaeosine biosynthesis radical SAM protein
                     RaSEA"
                     /protein_id="HVG37006.1"
                     /translation="MRLQQVVKDERRPREFDPREYISTWTEKDLLHGKIVDAWVIIFR
                     TRGCYWARSSGCSMCGYVNDVAQEVSPADIGHQLDVVLKKHQEQPLVKVYTSGNFFDD
                     HEVSPDVRERILTELGDRCDKVIVETLAHLLRRDQLDHALRFVDELEIALGLESTNEN
                     VLRYAVNKVWGLKEHARASTVAREAGATVKTYLLIKPPFLTEREAIEDAVRSGHEADP
                     YSDTVSFNPVNVQSRTIVDRLFRRGEYRPPWLWSVVEVLERTRDLKAHVKSHPTAGGM
                     VRGAHNCGTCDRRVVNAIEEFSLGLRADFADLSCACQDVWRAYGETQPFMMTSADPLA
                     VLEA"
     gene            2131..>2443
                     /locus_tag="VNA10_04690"
     CDS             2131..>2443
                     /locus_tag="VNA10_04690"
                     /inference="COORDINATES: protein motif:HMM:NF037822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5611 family protein"
                     /protein_id="HVG37007.1"
                     /translation="MREYELKRGTGKNLEGDGLRKIAADVFGDVGTDGGKVIVSHGAL
                     EKLVVWTDGKKLFVDTTMKPGVPDHVATDTIKAYNAFLERATGLTAKERGKRAKEAAQ
                     KG"
BASE COUNT          470 a          788 c          804 g          381 t
ORIGIN      
        1 cggaggaggt cgtggaagaa gagcttcccc gcgaggagcc gaaggagcca ggaccgagac
       61 ccccgatcgt tcgcctcaaa gtattccagg caaagaagcc ggcgctgatg gatctgtgca
      121 aggcgtacga cctcgatccg accgggacga aagagcagct ccgcgaacgg cttctgagtt
      181 atctcgacac gttggagtca gcagcggaac ctgagtcggc agcggagagt gaggcgccga
      241 cgggaccgga tcccaatgaa caacccggaa tcgagagtga gtccttccac acgcctgagg
      301 agattgcgga aaccccagcc ggcgaggagg aaccggaaag cgaacagccc gccagcgcga
      361 ctcccagcgc ggagacaccg gtcgtcgaag cgcagaccac ccgggaaccc gtcgcggaac
      421 gaatcgagac gccctcgttc gtctcgttcc cacaatccca gcccgtggtc tcggacgctc
      481 ccgtcgtcga gccgatgcgg gctctccatc cgtgtccgac gtgcggccgc gagctgacgt
      541 acatcgcccg atatcgaagg tggtactgct accactgccg ggcgtacgcg ccggtgagcg
      601 agtcgaagtt cgcttgtccg acctgtggcg cggccttgcg ctggatccgt caatacgaac
      661 ggtggtggtg cgattcctgc cgccggtacg cgcccgccga cctccccaga cctgagtccg
      721 cagcggtcgt caccggagtc gacaccgcga cgcccgcgga agtcgcgaaa ccgctgtact
      781 atgcgaccgc gtcctcggcg acgacggtca cgcatcgaca tcgaagccct ggcagcggga
      841 tcggctttgt cgcgtttggc gtgatcctct tcgtcttgta cgagatgctc gtcgacctac
      901 cggccgccct ctcctatcgc acggggatcg ccgtcgccgc ggacctcgcg ttcgggctgc
      961 ggttcttcgc cttcgtgttc gtcgcgctcg gcgccatcat gggcctgtcg gccgtgcgcg
     1021 atcgacgctg agccggcaaa ggtttttccg ggccgcgccg ttcgacgccg ggccatgcgg
     1081 cttcagcagg tcgtgaagga cgaacgacgc ccccgcgaat tcgacccgcg ggaatacatc
     1141 tccacgtgga cggagaagga cttgctccac gggaagatcg tcgatgcatg ggtgatcatc
     1201 ttccggaccc gcggctgcta ttgggcccgc tcaagcggat gctcgatgtg cggatacgtg
     1261 aacgacgtgg cccaggaagt gagccccgcg gacatcggcc accagctcga cgtggtcctg
     1321 aagaaacatc aggagcagcc gctcgtgaag gtctacacct ccggcaactt cttcgacgac
     1381 cacgaggtgt ctcccgatgt ccgcgagcgc atcctcacag aactcggaga tcgctgcgac
     1441 aaagtcatcg tcgagacgct cgcccacctg ttgcggcgcg accagctcga ccacgccttg
     1501 cgtttcgtcg acgaactcga gatcgccttg ggcctcgagt cgacgaacga gaacgtcctg
     1561 cggtacgccg tcaacaaggt ttggggcctg aaagaacatg cgcgggcctc gaccgtggcg
     1621 cgcgaggccg gcgcgaccgt gaagacgtat ttgctgatca agcccccctt cctgacggaa
     1681 cgcgaggcga tcgaagacgc ggtccgatcg ggacacgagg cggatccgta cagcgacacg
     1741 gtctccttca acccggtgaa cgtccagagc cggacgatcg tcgatcggct cttccgccgg
     1801 ggcgagtacc gtccgccgtg gctctggtcc gtcgtcgagg tcctcgaacg cacgcgggac
     1861 ctgaaagccc acgtgaagag ccacccgacc gcgggcggca tggtccgcgg ggcccacaac
     1921 tgcggaacgt gcgatcgacg cgtcgtgaac gcgatcgaag aattctcgct cggccttcgc
     1981 gcggacttcg ccgacctgtc gtgcgcctgc caggacgtgt ggcgcgccta cggtgagacg
     2041 cagcctttca tgatgacgtc cgcagaccca ttggcagtcc tcgaagcgta acgttcatac
     2101 gaggtccgag aatcgggaat cgcggtccgg atgcgcgaat acgagctgaa acgaggcacg
     2161 ggcaagaacc tcgagggcga cggcctgcgg aagatcgccg cggacgtgtt cggcgacgtc
     2221 gggacggacg gcgggaaggt catcgtctcc cacggcgccc tcgagaagct ggtcgtgtgg
     2281 accgacggga agaagctatt cgtcgacacg acgatgaaac ccggcgttcc ggaccacgtg
     2341 gccacggaca cgatcaaggc gtacaacgca ttcctggagc gggcgaccgg gctgacggcg
     2401 aaggagcggg gcaagcgagc gaaggaagcc gcgcagaaag ggg
//
LOCUS       DATLMA010000367         1477 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_94754, whole genome shotgun sequence.
ACCESSION   DATLMA010000367 DATLMA010000000
VERSION     DATLMA010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94754"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1032)
                     /locus_tag="VNA10_04695"
     CDS             complement(<1..1032)
                     /locus_tag="VNA10_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020388739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 domain-containing protein"
                     /protein_id="HVG37008.1"
                     /translation="MSSHREAPTISKDPVADNTDLYAFVDPVDTSKVTILSNFIPLEE
                     PAGGPNFFQFGDDVLYEILIDNDGDGVEDVTYQFRFKTTTQNPATFLYNTGPIGSLTD
                     PNWNVRQLYSVTKVVGPRRTGSSTLLGSDLPTPPVRIGPRSTPDYASLADAAVNSLGG
                     GVKTFAGQRGEGFYVDLGSIFDLGTLRPFQNLHLIPTPAAPGVNGTKGFNVHSIAIQV
                     PKTDLTRNGFNPSDPADPRSVIGVWSAASRRKGTVREKNARIVQSGPWVQVSRLGEPL
                     INEVVIELGEKDLWNSQTPDADAQFLDDYAHPQLQGLLPVLYPGVFPNLAALTGTGAS
                     RADLIAILLT"
     gene            complement(1039..1314)
                     /locus_tag="VNA10_04700"
     CDS             complement(1039..1314)
                     /locus_tag="VNA10_04700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HVG37009.1"
                     /translation="MADEKKSKMSRRSFLQKTAVGAAAVGAMTAAPTILKMTENVQAS
                     PPPGDVNTPVMAYVKDAATGTVVVMWGTQEIVTRDLGLANRLTNYAR"
BASE COUNT          231 a          471 c          490 g          285 t
ORIGIN      
        1 ggtcaggagg atcgcgatca gatcggcccg ggaggcaccg gtcccggtca gcgccgcgag
       61 gttcgggaag acgccggggt acaggaccgg caggaggcct tggagctgcg ggtgcgcgta
      121 gtcgtcgagg aactgcgcat ccgcgtccgg ggtctggctg ttccacaggt ccttctctcc
      181 gagttcgatg acgacctcgt tgatcagcgg ctcgccgagt cgactcacct ggacccacgg
      241 cccgctctgc acgatccgcg cgttcttctc gcggaccgtc cccttgcgtc ggctcgccgc
      301 ggaccagacc ccgatgacgg agcgcgggtc ggccggatcg gacggattga atccgttccg
      361 ggtcaaatcc gtcttcggca cctggatcgc gatcgagtgc acgttgaagc ctttcgtccc
      421 gttgacgccc ggcgccgccg gcgtcgggat caagtgcagg ttctggaacg gtcgcaacgt
      481 cccgaggtcg aagatcgaac cgaggtcgac gtagaagcct tcgccgcgtt ggccggcgaa
      541 cgtcttcacg ccgccgccga ggctgttcac cgcggcgtct gcgagcgacg cgtaatcggg
      601 cgtggaccgc gggccgatcc ggaccggcgg cgtcggcaga tccgaaccga gcaacgtgga
      661 gctcccggtc ctccgggggc cgacgacctt tgtcacggag tacagttgcc gcacgttcca
      721 gttcggatcc gtcagggagc cgatcggccc ggtgttgtag aggaacgtcg cggggttctg
      781 cgtcgtcgtc ttgaatcgga actggtaggt gacgtcctcg acgccatccc cgtcgttgtc
      841 gatgaggatc tcgtacagga cgtcatcgcc gaattggaag aagttcggac cgccggcggg
      901 ctcctcgagg ggaatgaagt tcgagaggat cgtgaccttc gaggtgtcga ccgggtcgac
      961 gaacgcgtag aggtccgtgt tgtccgcgac cggatccttc gaaatcgtgg gcgcctcgcg
     1021 atgggacgac atcggacctc acctcgcgta gttcgtgagg cggttcgcga gtccgagatc
     1081 ccgggtcacg atctcttgcg tgccccacat cacgaccacc gtcccggtgg ccgcgtcctt
     1141 cacgtaggcc atgaccgggg tgttcacatc acccggtggc gggctcgcct ggacgttctc
     1201 cgtcatcttc aggatcgtcg gcgctgcggt catcgcacca accgccgccg ctcccaccgc
     1261 cgtcttctgc aaaaagctcc gtctcgacat cttcgatttc ttctcatcgg ccattcgatt
     1321 cccctccgtc cgcgtgcgag aagcggattc ctctcgccgt tctccgggcg gcggaccggc
     1381 tcgaggtata tttcgacgtg tgtaacatcg cgtgttacaa agggacgcat cgatggccgg
     1441 gttcacaaga agagttcggc ttgtcgatgt cggggcg
//
LOCUS       DATLMA010000368         1118 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_879518, whole genome shotgun sequence.
ACCESSION   DATLMA010000368 DATLMA010000000
VERSION     DATLMA010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879518"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VNA10_04705"
     CDS             complement(<1..333)
                     /locus_tag="VNA10_04705"
                     /inference="COORDINATES: protein motif:HMM:NF013401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HVG37010.1"
                     /translation="MMAEVLFAPWRYEYLVAEKPSGCIFCRAAASGNEEESLVVYRGR
                     RVFVLLNRYPYTNGHLMVAPYEHLARLSDSEPETLNELISTVARGEKILIDSYRTDGL
                     NIGVNLGSA"
     gene            complement(349..624)
                     /locus_tag="VNA10_04710"
     CDS             complement(349..624)
                     /locus_tag="VNA10_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018048350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HVG37011.1"
                     /translation="MTKAELIERVAVATDVTKKQAEAIVDTIFEAIIRSLKQGQKIEL
                     RGFGSFRLRERGARIGRNPKTGVKVAVPAKKIPYFKPGKELKELINR"
     gene            complement(658..>1118)
                     /locus_tag="VNA10_04715"
     CDS             complement(658..>1118)
                     /locus_tag="VNA10_04715"
                     /inference="COORDINATES: protein motif:HMM:NF012784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HVG37012.1"
                     /translation="EFQPNDFQTFRERHQPGDVVDGTVSRIADFGVFVQIEGLVEGLM
                     HVSETPLPRGEKPQEHYREGEPVRVRILRIDETEMKIGLSGVDEAGQPLAAATPSEAA
                     AEPVSAEAADAAPSGAPEVAAEATGEEPAPKKRRTRKKAEETPSKPEPES"
BASE COUNT          175 a          369 c          358 g          216 t
ORIGIN      
        1 ggccgagccc aggttgacgc cgatgttcaa accgtccgtg cggtagctgt cgatcaggat
       61 cttttccccg cgcgccacgg tcgagatgag ctcgttcaac gtctccggtt cggaatccga
      121 gagacgggcg agatgctcgt acggcgcgac catcaggtgg ccgttcgtgt agggataccg
      181 gttgaggagc acgaaaaccc tccggccccg gtacacgacc agcgactcct cctcgttccc
      241 ggaggcggcg gctcgacaga agatgcagcc actcggtttc tccgccacga ggtactcgta
      301 acgccagggg gcgaagagga cttccgccat catcggaacc ggcgagaact accggttgat
      361 gagctccttc aactccttgc ccggcttgaa atagggaatc tttttcgcgg gaacggcgac
      421 tttcaccccg gtcttcggat tgcggccgat gcgggctccg cgctcacgca gccggaagga
      481 accgaatccg cggagctcga tcttctgtcc ctgcttcagg gaacggatga ttgcttcgaa
      541 gatcgtgtcc acgatcgcct cggcctgctt cttggtcacg tccgtcgcga ccgcgacgcg
      601 ctcgatcagt tcggccttcg tcatcgcaag atctccaaac cggacccggt gaagggatta
      661 cgactcaggc tcgggcttcg aaggcgtctc ttccgccttc ttgcgcgtgc gccgcttctt
      721 gggggcgggt tcctctccgg tggcctcggc ggcgacttcc ggcgccccgg agggcgccgc
      781 gtcggccgcc tccgcggaaa ccggctcggc ggccgcttcg gagggggtag ctgccgcgag
      841 cggctgcccc gcttcgtcca cgccggaaag accgatcttc atctcggtct cgtcgatccg
      901 gagaatccgc acccggaccg gctctccttc gcggtagtgc tcctggggtt tctcgccgcg
      961 cgggagcggc gtctcggaga cgtgcatcag cccttcgacg agcccctcga tctggacgaa
     1021 cacgccgaaa tcggcaatgc ggctgaccgt gccgtcgacg acgtcgccgg gctgatggcg
     1081 ctcgcggaag gtctggaagt cgttcggttg gaattcct
//
LOCUS       DATLMA010000369         2408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_95038, whole genome shotgun sequence.
ACCESSION   DATLMA010000369 DATLMA010000000
VERSION     DATLMA010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95038"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VNA10_04720"
     CDS             <1..629
                     /locus_tag="VNA10_04720"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR01213.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0031119 - tRNA pseudouridine synthesis
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA pseudouridine(54/55) synthase Pus10"
                     /protein_id="HVG37013.1"
                     /translation="GKMYPTSVEEVIAAEIMRESGGTGHALHGMGREDVDARMLGRGR
                     PFIVEIKEPRKRRINFDGVVRRINESGIVEVDQFVPATGADVVALKEDRASKTYRVLL
                     RMAPPVDEAKLKATLPVLVGEPIAQRTPGRVVHRRADTTRARRLLSAEVVGVEGDRAE
                     LRVTAEAGTYIKEWVHGDGGRTRPSLAERLGAACEVLELDVLDVHDGG"
     gene            634..924
                     /locus_tag="VNA10_04725"
     CDS             634..924
                     /locus_tag="VNA10_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013798807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21e"
                     /protein_id="HVG37014.1"
                     /translation="MVKASKGIMEKTRQKFRRSPRQRGLSPITRSLATYKVGERVTIV
                     IDSSVQKGWPHHRFHGMTGTVVERRGAAFVVDVRFGGRIKQAIVRPEHLRRA"
     gene            934..1254
                     /locus_tag="VNA10_04730"
     CDS             934..1254
                     /locus_tag="VNA10_04730"
                     /inference="COORDINATES: protein motif:HMM:NF015812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase Rpb4 family protein"
                     /protein_id="HVG37015.1"
                     /translation="MEESYVSLAELKVILEKEKTVRGELNPEQQYSLSHASLFARVPA
                     EKVLPIVKELMEIPLMSPFNALKIVDLMPTHLDDVRAIFAKERFSLSKEDADKVLEIV
                     GKYR"
     gene            1268..1816
                     /locus_tag="VNA10_04735"
     CDS             1268..1816
                     /locus_tag="VNA10_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF655 domain-containing protein"
                     /protein_id="HVG37016.1"
                     /translation="MEDYARILDFLPQGHPDQSKFHREPLAYALGVDEFKLFELVPKE
                     GVSLSVGQRVYIGKEIDMRAEVLHVKRRVGYEELTTAAQKELPFVIAETVKEKEDKFV
                     DFFNRAQAITTRFHMLELLPGLGKKTMWAILEERKKGPFKSFADLDQRVPSVHHPEKL
                     IAKRIEMEISDPTQKYRLFVAR"
     gene            complement(1813..>2408)
                     /locus_tag="VNA10_04740"
     CDS             complement(1813..>2408)
                     /locus_tag="VNA10_04740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37017.1"
                     /translation="GEKQRMLAYYLAPRGWERAMGIKERLSKVRVPVKVAGATKEMSL
                     EEIDSATSVHLTLSDIVREAMNVDELDLEYLEGIDDRRKRAMDERVKRLEDYTRAVMT
                     AWKDGRVTATERLLVEQLRENLGISREEQERIESEVLEEVIENRAGIYRAVAAQALED
                     GPVTEDVRELLEALRKKLGLSSHDCREIEAVLTKSTA"
BASE COUNT          455 a          753 c          781 g          419 t
ORIGIN      
        1 ccggcaagat gtacccgacg agcgtcgagg aagtgatcgc ggcggagatc atgcgggagt
       61 ccggcggcac cggccacgcc ttgcacggca tgggtcgcga ggacgtcgat gcgcggatgc
      121 tcggccgcgg gcgaccgttc atcgtcgaga tcaaggagcc ccgcaaacgt cgaatcaact
      181 tcgacggagt ggtgcgccgg atcaacgaat ccgggatcgt agaggtcgat cagttcgtgc
      241 ccgcgaccgg ggcggacgtc gtcgcgctga aggaggatcg cgcctcgaag acttaccgcg
      301 ttctcctccg gatggcgcct cccgtggacg aagcaaagct taaagcgacg ctcccggttt
      361 tggtcggcga gccgattgcc cagcgcacgc ctgggcgggt tgttcaccgg cgcgcggata
      421 ccacacgggc tcgacggttg ctctcggccg aggtcgtcgg cgtggaggga gaccgggcgg
      481 aactccgcgt gaccgcggaa gccgggacct acatcaagga gtgggtccac ggggacgggg
      541 gccggacgcg gccgtccctc gcggaacgac tcggcgcggc gtgcgaggtg ctcgagctcg
      601 acgtcctcga cgtgcacgac ggcgggtgag gaaatggtca aggcctcgaa agggatcatg
      661 gagaagacgc ggcagaagtt ccgccgcagc ccccgccaac gcgggctctc cccgatcacg
      721 aggtcgctcg cgacgtacaa ggtcggggag cgggtgacga tcgtcatcga ttcgagcgtc
      781 cagaaaggat ggcctcacca ccggttccac ggcatgaccg gcacggtcgt ggaacgccgc
      841 ggcgccgcct tcgtcgtcga cgtccgcttc ggcgggcgga tcaagcaagc gatcgtgcga
      901 cccgagcacc tgaggcgggc gtaggagggg gccatggaag agtcgtacgt gtcccttgcc
      961 gaactgaagg tcatcctgga gaaggagaag accgtccggg gcgagttgaa tccggagcag
     1021 caatactcgc tatctcatgc ttccctcttc gcgcgcgtcc cggccgagaa ggtcctcccg
     1081 attgtgaagg agctcatgga gatcccattg atgtcgccct tcaacgcgtt gaagatcgtc
     1141 gacctgatgc cgacgcacct cgacgacgtc cgcgcgatct tcgcaaagga gcgtttcagc
     1201 ctatcgaaag aggatgcgga caaagtcctc gagattgtgg ggaagtaccg ctgacgaggc
     1261 gacgcgcatg gaagattacg cccgcatcct cgatttccta ccgcaaggtc atcccgacca
     1321 gtcgaaattc catcgggaac cgctcgcgta tgcgctcgga gtcgacgagt tcaaactgtt
     1381 cgagctcgtg cccaaggaag gcgtgagcct ttccgtcggg caacgcgtct acatcggcaa
     1441 agagatcgac atgcgcgcgg aggtcctgca cgtaaaacgg cgcgtgggat acgaggagct
     1501 cacaaccgcg gcgcaaaagg aactcccgtt cgtcatcgcg gagacggtca aggaaaaaga
     1561 ggacaagttc gtggatttct tcaaccgcgc acaggcgatc acgacccggt tccacatgct
     1621 cgagctgttg cccggcctcg gcaagaagac gatgtgggcg atcctggagg agcgcaagaa
     1681 gggtccattc aagtcgttcg cggatctcga tcaacgcgtg ccgagcgttc atcatcccga
     1741 gaagctcatc gcgaagcgaa tcgagatgga gatctcggac ccgacgcaga agtaccgcct
     1801 gttcgtggcc cgctaggccg tcgatttcgt gagaaccgct tcgatctccc ggcaatcgtg
     1861 cgaggagagg ccgagtttct tccgcaacgc ctcgaggagt tcgcgtacgt cctcggtcac
     1921 cgggccgtcc tccagcgctt gggcagcgac cgcacgatag atcccggcgc ggttctcgat
     1981 tacttcctcc aagacctcgc tctcgatgcg ctcctgctcc tcccgcgaga tgccgaggtt
     2041 ctcccgcagc tgctcgacga ggaggcgctc cgtcgccgtg acccggccat ctttccatgc
     2101 agtcatgacg gcccgggtgt agtcctcgag gcgcttcact cgttcgtcca tcgctcgttt
     2161 gcgccggtca tcgatccctt ccaggtactc gagatcaagt tcgtcgacgt tcatcgcttc
     2221 gcgaacgata tcggagaggg tcaggtggac tgaggtcgcc gagtcgatct cctcgaggct
     2281 catctccttc gtcgcgccgg cgaccttcac gggcacacgg accttcgaga ggcgctcctt
     2341 gattcccatc gcgcgctccc agccgcgcgg cgccaggtag tacgccagca tgcgttgctt
     2401 ctcgccca
//
LOCUS       DATLMA010000370         2330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_456829, whole genome shotgun sequence.
ACCESSION   DATLMA010000370 DATLMA010000000
VERSION     DATLMA010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456829"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VNA10_04745"
     CDS             <1..293
                     /locus_tag="VNA10_04745"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007101828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HVG37018.1"
                     /translation="EPVARRALVSEDELAARLREVPGWSRAGNAIERTWTFSDFSEAL
                     AFMNKVGALAEAMNHHPDIANSWATVRLTLTTHDKGGLTNLDFDLAKKINDL"
     gene            complement(290..688)
                     /locus_tag="VNA10_04750"
     CDS             complement(290..688)
                     /locus_tag="VNA10_04750"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HVG37019.1"
                     /translation="MVFASYSDVAALIGRVALGALFLTHGWPKIKDLRKPIGFVKGTG
                     WPGGAAFAALFSLLEFFGGLALIIGLLTQIVAVLFVLEMIATTVFSKTKLNKKFGLGY
                     ELDLVYAAFALVLALLGPGAWSLDRLLGWA"
     gene            complement(766..>2330)
                     /locus_tag="VNA10_04755"
     CDS             complement(766..>2330)
                     /locus_tag="VNA10_04755"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HVG37020.1"
                     /translation="KLMHEGMRDATIVLCFILGIVISFLLFNAADAAAGTVVLPEWKP
                     ISSAIASTSIFRADPAFWWRTLWWTHVVLLFSFLAYVPHSKHIHIIFAIVNTFFMDLT
                     PKGALKTVDLEKTETFGVNRVEQLSWRQLLDGYACTECGRCTAACPANATGKPLDPMR
                     IITNMRDTLNDQGSAIVGGQIEGLPDMFQTVHSDEGIWACTTCYACVYECPVMNEHLP
                     KIIDMRRNLVLTQGKIPPESMDMLRNIETNYNPWGIGWDQRGRWAEGLGVRTVAEAIA
                     ANEPIDVLYWVGCAASFDDRNRKVAQAFARILRKAGVRFAILGAEEKCTGDPARRIGN
                     EYLAQTMIRANVTTLNQYGVKRIVASCPHCFNAIKNEYPEFGGTYEVVHHSQFLQQLI
                     REGRLTPTRDVLQFLTYHDPCYLGRYNDVYDEPRDVLYRIPGVRVVEMRECRDRGFCC
                     GAGGARMWMDERTGEKVNHRRLSHIEETRANAVATACPYCLIMFDDATKTKNREDIRR
                     FDIAELLERSLP"
BASE COUNT          420 a          768 c          722 g          420 t
ORIGIN      
        1 cggagcccgt ggcccggcga gccctagtct ccgaggacga gttggcggcc cgccttcgcg
       61 aggtcccggg ctggtctcgc gcgggcaatg cgattgagcg cacctggacg ttcagtgatt
      121 tctccgaggc gctcgcgttc atgaacaagg tcggtgcgct cgcggaggcg atgaaccatc
      181 atccggatat cgcgaattcg tgggccaccg tgcggctcac gctgacgacg cacgacaagg
      241 gcggcctgac aaacctcgat ttcgatctcg cgaagaagat caacgatctc taggcccaac
      301 cgaggagccg atccagggac cacgcgcccg gccccaggag cgcgaggaca agggcgaacg
      361 ccgcatacac cagatcgagc tcgtatccta agccgaactt cttgttcagc ttcgtcttcg
      421 agaacaccgt cgtcgcgatc atctcaagga cgaagaggac ggcgacgatt tgcgtcagga
      481 ggccgatgat cagggcgagg cccccgaaga attcaagcag cgagaagaga gccgcgaacg
      541 cagccccccc gggccacccg gtccctttca cgaagccgat cggtttcctg aggtccttga
      601 tcttcggcca gccgtgggtc aagaacaggg ccccgagcgc cacgcggccg atgagtgccg
      661 ccacatccga gtacgaagca aagaccatgg gtccgccccc tcgggaccct ttggcggccg
      721 cgatagaaaa acctttcacg acagctgccg acgtctccgc cccatctacg ggagcgaccg
      781 ttcgaggagt tcggcgatat caaaccgacg gatgtcctcg cggttcttcg tcttcgtggc
      841 gtcgtcgaac atgatcagac agtaaggaca tgccgtcgcc accgcgttgg cgcgcgtctc
      901 ttcgatgtgg ctcagccggc gatgattcac cttctcgccc gtccgctcgt ccatccacat
      961 ccgcgctccg ccggcgccac aacagaatcc gcgatcacgg cattcgcgca tctcgacgac
     1021 gcgcacgccg gggatgcggt acaacacgtc ccgcggctcg tcgtacacgt cattgtaccg
     1081 tcccaggtag cacggatcgt ggtacgtcag gaactggagc acgtcccgcg tgggggtgag
     1141 ccgtccctcc cggatcagtt gctggaggaa ttggctgtga tggacgacct catacgtccc
     1201 cccaaactcc gggtactcgt tcttgatcgc gttgaagcag tgcgggcagc tcgcgacgat
     1261 ccgcttcacg ccgtactggt tcagcgtcgt cacgttcgcc cgaatcatcg tctgcgcgag
     1321 gtactcgttg ccgatccgcc gcgccgggtc gccggtgcac ttttcctcgg ctcccaggat
     1381 ggcgaatcga acgccggcct tccgcaggat gcgggcgaag gcctgggcga ccttccggtt
     1441 ccgatcgtcg aacgaggccg cgcagccgac ccagtagagg acgtcgatcg gctcgttcgc
     1501 cgcgatcgcc tcggcgacgg tccggacccc gaggccctcg gcccaccggc cgcgctggtc
     1561 ccatccgatt ccccatgggt tgtagttcgt ctcgatgttc cgcagcatgt ccatcgactc
     1621 gggagggatc ttcccttggg tcaggaccag gttccttcgc atgtcgatga tcttcggcag
     1681 atgctcgttc atcaccgggc actcgtagac gcaggcgtag caggtcgtgc acgcccagat
     1741 cccctcgtcc gaatggaccg tctggaacat gtcgggcagg ccctcgatct gccctcccac
     1801 gatcgcgctg ccctggtcgt tcagggtgtc ccgcatgttc gtgatgatcc gcatcgggtc
     1861 tagcggcttg ccggtcgcgt tcgccgggca cgcggcggtg cagcgtccgc actcggtgca
     1921 cgcgtatccg tcgaggagct gccgccatga gagttgctcg acacggttca ccccgaacgt
     1981 ctcggtcttc tccaggtcca cggtcttcaa ggcgcccttc ggggtcaggt ccatgaagaa
     2041 cgtgttcacg atcgcgaaga tgatgtggat gtgcttcgag tgcggcacgt aggccaagaa
     2101 cgagaacagg aggacgacgt gcgtccacca caaggtccgc caccagaacg cgggatcggc
     2161 cctaaagatc gaggtgctcg cgatcgccga cgagatcggc ttccattccg ggaggacgac
     2221 cgtcccggcg gcggcgtccg cggcgttgaa caggagaaat gaaatcacga tgccgaggat
     2281 gaagcacagg acgatcgtcg cgtcgcgcat cccctcgtgc atgagcttct
//
LOCUS       DATLMA010000371         6749 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_457338, whole genome shotgun sequence.
ACCESSION   DATLMA010000371 DATLMA010000000
VERSION     DATLMA010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 6749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6749
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457338"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..926
                     /locus_tag="VNA10_04760"
     CDS             87..926
                     /locus_tag="VNA10_04760"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37021.1"
                     /translation="MPINQDRLRKMADHGLTEYQARVYLTLLDLGSATASQISPLSKV
                     PRTRIYATMQQLHEKGLVQILPETPLRYKAVPFATYLQTLAEEMRSRAKQIDSGLDGL
                     AREFAISAQREPESRGRFEAIYGRKNVRERLLKMYDGATREVIGIGTTKSPGRILGAF
                     MPNLVDTAKQGVRLKYAFCFTPDNRGDVTALLKIAEVRHIDFMMPVYMHVFDGKEFLM
                     SHPIPDDDSSYRGDDIAIWTDDLAIADAMSEMAERIWEMGKPAADVLEEGREAKRLAV
                     TRP"
     gene            complement(913..1896)
                     /locus_tag="VNA10_04765"
     CDS             complement(913..1896)
                     /locus_tag="VNA10_04765"
                     /EC_number="1.2.7.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018192785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018491 - 2-oxobutyrate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0019164 - pyruvate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0047553 - 2-oxoglutarate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HVG37022.1"
                     /translation="MALEQILKPADFATDVHNDWCPGCGDFGILRTIQMALAELKMEP
                     HRVTIVSGIGCSAKTVHYVKTYGIHTLHGRALPYATGVKLANPQLKVLCLSGDGDGLG
                     IGGGHFVNAGRRNLDMLYIIHDNGVYGLTKGQAAPTLKLGVQTKSLAHPNINEAVNPI
                     WLALAAGATWVGRGYSYDIKHLVATIKQGIEHKGYAFLDVLQPCPTYNDLNTKEWYGG
                     EDRKDPASGRAMPRVYKLEDQGYDPVVHDPAEVEKKTTQALEKALEWGDRIPIGVFYK
                     NEHVPTFEERIAQRVPTYMEHPPALQPIAGPNGEPRTDLTRLMQRLTFKAE"
     gene            complement(1886..3874)
                     /locus_tag="VNA10_04770"
     CDS             complement(1886..3874)
                     /locus_tag="VNA10_04770"
                     /EC_number="1.2.7.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020266864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018491 - 2-oxobutyrate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0019164 - pyruvate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0047553 - 2-oxoglutarate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     alpha"
                     /protein_id="HVG37023.1"
                     /translation="MSPPAVRVNDLAWMIGGPQGSGVDSSANVFARACAAGGLHIFGK
                     REFYSNIMGEHSYFALRAHSGLVRSHIDDVNVLATFEAETLFRHAREVTDDGAIIYDP
                     SLGKTRLSDVPTIEKRLDADLKTYLISRGVGETLGDMLVASKQRGVSLVPIPFHDLLE
                     QVADEFQIDQLSKISRVVNMLAVGASFGILGFDFEMMRSSLEDVFRAKAKVVNMNAAG
                     ARKAYDIAKALVPEFPYRLEKLPRKESRLFLTGSQATALGKLYGGMRFQTYYPITPAS
                     DESEFLEENEILDLNGHGLAPDAAGTANAKEEAASMLVVQTEDEIAAITMATGAALTG
                     ARSATATSGPGFCLMMEGIGWASINEVPVVITLYQRAGPSTGMPTRHEQGDLRFALHA
                     GHGESPRILLASGDFEECIRDGLLAFNYADRYQMPVIHLVDKALANSYATTPVPDLSD
                     LRIDRGAVVDGNNGYTTENPYKRFDLGNGPVSPRAFLGQPGTIFWNTGDEHEEHGHIT
                     EDPAVRDAMMEKRFAKLDLAAKEIPRDVKFRYFGPKDAATVIVSWGSTKGALLDALDR
                     LWAEGAKVGYLHVRLINPFPSEEILPYLTKAKRRIGIEMNFGAQLAGIVREYTGVAMT
                     HFILKYNGRPMSNTELYDAIQTVMSGKAAKRTVLTRGS"
     gene            complement(4079..5065)
                     /locus_tag="VNA10_04775"
     CDS             complement(4079..5065)
                     /locus_tag="VNA10_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015503939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HVG37024.1"
                     /translation="MPSSTPAEPVVEEDRVCPECGSEHLVRDYARGELVCDSCGLVIS
                     EGAIDEGPEWSAYSVEENDRLARTGAPRSYVAGASGLTTVIPLANKDARGNTIPLRER
                     EKFYRMRKLQRHSGHSRPGERSLPETIRSLDRVASLMGLPRPVKDEAGFICKKALEKG
                     LVRGRSIEAIVAAAVYAACRIDGVPRTLDELQQVTGVRKKTIGKAYGALLRTLTLRVP
                     PSRPMNYVSRFCSRLGLSNTVEAEAQKILKELEKIDSSMSLSPSGTAAAAIYLASLSC
                     GERRPQKAIAKIAGVSEVTLRNRFQFMEGFMQQLVLPRGRAPKIGPPSQGSS"
     gene            5402..>6749
                     /locus_tag="VNA10_04780"
     CDS             5402..>6749
                     /locus_tag="VNA10_04780"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006903478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HVG37025.1"
                     /translation="MADFRVEKDFLGEVKVPKDAYWGVQTQRAIENFPISGIRFGRRF
                     IYALGLIKMACAQTNMELGLLDAKIGKATVQACQEVMDGKLDAQFPLDIFQTGSGTST
                     NMNANEVIANRANEILGHPLGEKGPVHPNDHVNMGQSSNDVIPTAIHVAALLEIDHGL
                     LPALRELEDSLAKKAKEFDPIVKAGRTHLMDATPIRLGQEFSGYQSQIDHGIRRVSAA
                     RAALAELAIGGTAVGTGINAHPDLPGRVVEKISGATNTKFRVAENHFEAQAARDALVE
                     ASGAIRTVAISMIKIANDLRWLGSGPHTGLRELNLPAVQPGSSIMPGKVNPVIPEAVM
                     QVGVTVIGNDVAIAVANTHSNLDLSTMMPVMSQRIQQNIELLANVARVFAHRCIDGIT
                     ANVEVLRRYAESSPAIATKLNPIIGYEKAAEIAKEAGQTGKTVKQLVIEKGILSPEE"
BASE COUNT         1180 a         2179 c         2177 g         1213 t
ORIGIN      
        1 cagcgactca cttgcccttt tcgccactca tgtgtcaccg aacggaggaa caacgtttat
       61 gtcgagcccc gccttcgacg ccgcgcgtgc ccatcaatca agaccgcctc cggaagatgg
      121 cggaccatgg actgacggaa taccaggccc gcgtgtacct caccttgttg gatctcggct
      181 cggcgacggc gagccagatc tcgccgctct ccaaggtccc gcggacgcgc atctacgcga
      241 cgatgcaaca gctccacgaa aaaggtctcg tccagatctt gcccgagacg ccgctccgct
      301 acaaggccgt cccgttcgcg acctacctgc agaccctcgc ggaagagatg cgatcccggg
      361 cgaaacaaat cgacagcgga ctcgatggcc tcgctcgcga gttcgcgatc agcgctcagc
      421 gagagccgga atcgcgcgga cggttcgaag cgatctacgg acggaagaac gtccgggagc
      481 gactcctgaa gatgtacgac ggcgcgactc gggaggtgat cggcatcggg acgacgaaga
      541 gccccggacg aatcctcgga gccttcatgc cgaatctcgt cgacacggcg aagcaaggag
      601 ttcgactgaa gtacgcgttc tgcttcacgc cggataaccg cggcgatgtg accgcactcc
      661 tgaaaatcgc ggaggtgcgc cacatcgact tcatgatgcc ggtctacatg cacgtgttcg
      721 acggcaaaga gttcctcatg agccacccga tcccggacga cgattcctcg taccgcggcg
      781 acgacatcgc gatctggacc gacgatctgg cgatcgcgga tgcgatgtcc gagatggcgg
      841 agcggatctg ggaaatgggg aagcccgcgg cggacgtcct cgaagaagga cgcgaggcga
      901 agcgcttggc cgtcactcgg ccttgaacgt cagccgctgc atgagccgcg tcaggtccgt
      961 cctcggttcg ccgttcgggc ccgcgatcgg ctggagggcc ggcgggtgct ccatgtaggt
     1021 cggcacgcgc tgcgcgatgc gctcttcgaa ggtcggcacg tgttcgttct tgtagaacac
     1081 gccaatcggg attcggtctc cccattcgag cgccttctcg agcgcctgcg tcgtcttctt
     1141 ctcgacctcg gccgggtcgt ggaccaccgg gtcgtagcct tggtcctcga gcttgtagac
     1201 gcgaggcatc gctcgaccgc tcgccggatc cttacggtcc tcgccgccgt accactcttt
     1261 cgtgttcagg tcgttgtacg tcgggcacgg ctggaggacg tcgaggaagg cgtagccctt
     1321 gtgctcgatc ccctgcttga tcgtggcgac gaggtgtttg atatcgtacg agtaaccgcg
     1381 gccgacccag gtcgcgccgg cggcgagggc gagccagatc gggttgaccg cctcgttgat
     1441 gttcggatgg gccagcgact tcgtctgcac cccgagcttc aaggtcggcg ccgcctggcc
     1501 tttcgtcagg ccgtacacgc cgttgtcgtg gatgatgtac agcatgtcca ggttccggcg
     1561 acccgcgttc acgaagtggc cgcccccgat tcccaggccg tccccgtcgc cgctgaggca
     1621 caggaccttc agctgggggt tcgcgagctt cacgccggtc gcgtagggga gcgcgcggcc
     1681 gtgcaacgta tgaatcccgt aggtcttcac gtagtggacc gtcttcgccg agcacccgat
     1741 cccggagacg atcgtcacgc ggtgcggctc catcttgagc tctgcgaggg ccatctgaat
     1801 cgtccggagg atgccgaagt ccccacagcc ggggcaccag tcgttgtgga catcggtcgc
     1861 gaagtcggcg ggtttcagga tctgctcaag agccacgggt caacaccgtc ctcttcgccg
     1921 cctttccgct catcaccgtc tggatcgcgt cgtacaattc cgtgttggac atcggccggc
     1981 cgttgtactt caggatgaag tgggtcatcg cgacgcccgt gtactcccgc acgatcccgg
     2041 cgagctgcgc cccgaagttc atctcgattc cgattcggcg tttcgccttc gtgagatacg
     2101 ggaggatctc ttcgctcggg aacggattga tcaaccggac gtggaggtag ccgaccttgg
     2161 cgccttccgc ccacagacgg tccagcgcat cgaggagcgc gcccttcgtg gatccccagc
     2221 tcacgatgac cgtggcggca tccttcgggc cgaagtatcg gaacttgacg tcgcggggaa
     2281 tctccttcgc ggcgaggtcg agtttcgcga agcgcttctc catcatcgcg tcgcgcaccg
     2341 cagggtcctc cgtgatgtgt ccgtgctcct cgtgttcgtc gccggtgttc cagaagatcg
     2401 tcccgggctg accgaggaag gcgcgcgggg acacgggtcc gttgcccagg tcgaaccgct
     2461 tgtatggatt ttccgtggtg tacccgttgt tcccgtcgac gacggcgccc cggtcaatcc
     2521 ggagatccga caggtccggg accggcgtcg tggcgtagct gtttgccagc gccttgtcga
     2581 cgaggtggat caccggcatc tgataccggt ccgcgtagtt gaaggccaac aggccgtccc
     2641 ggatgcactc ctcgaagtcc cccgacgcca gcaggattcg cgggctctcg ccgtggccgg
     2701 catggagcgc gaagcgcagg tcgccctgct cgtggcgggt cggcatcccg gtgctcgggc
     2761 cggcgcgctg gtacagcgtg atgacgaccg gcacctcgtt gatcgaggcc cagccgatgc
     2821 cctccatcat cagacaaaag cccgggcctg aggtcgcggt cgcggaccga gcacccgtca
     2881 gcgcggctcc cgtcgccatc gtgatcgcgg cgatctcgtc ttccgtctgc acgacgagca
     2941 tcgaggccgc ttcctccttc gcgttcgccg ttccggccgc gtcgggcgcg agcccatgcc
     3001 cgttcaggtc gaggatttcg ttttcctcga gaaactcgct ctcgtcggac gcgggggtga
     3061 tggggtagta cgtctggaaa cgcattccgc cgtacagctt cccgagggcc gtcgcttggc
     3121 tgcccgtgag gaacagccgc gattccttgc gcgggagctt ctcgagccgg tacgggaact
     3181 ccggcacgag agccttcgcg atgtcgtacg ccttccgtgc gcccgcggcg ttcatgttga
     3241 cgaccttcgc cttcgcgcgg aagacgtcct ccaaggagga ccgcatcatc tcgaagtcga
     3301 atccgaggat gccgaacgac gcacccaccg cgagcatgtt gacgacgcgg gagatcttgc
     3361 tcaactggtc gatctggaat tcgtcggcca cctgctcgag gagatcgtgg aacggaatcg
     3421 gaacgaggct cacgccgcgc tgcttcgacg ccacgagcat gtcgccgagc gtctcgccga
     3481 cccctcgcga gatcagatat gtcttcaggt cggcgtcgag gcgcttctcg atcgtaggga
     3541 catccgagag acgcgtcttc ccgagcgacg ggtcgtagat gatcgcaccg tcgtcggtga
     3601 cttcccgggc gtgccggaag agggtctccg cttcgaacgt cgcgagcacg ttgacgtcgt
     3661 cgatgtggga ccggacgagc cccgaatggg ctcgaagggc gaagtaggaa tgttcgccca
     3721 tgatgttcga atagaactcg cgcttcccga agatgtgcaa gccgccggcg gcgcaggcgc
     3781 gcgcgaacac gttcgccgac gagtcgacgc cgcttccctg aggacctcca atcatccagg
     3841 cgaggtcgtt cacccggacc gccggtggac tcatcggatc atgccgccct cacgcccaaa
     3901 ggcgggagcc ttcttgggag ttttccaatt ccggattcag cgggaaggag gggtcggacg
     3961 tccgtccctc ggggtcgtcg atggcgccgc gtggtccaat cacggagcga gggacgcaag
     4021 agcaccttat caaacctttc ctccagattc cgcgggacgg aactcgttcg cggcattcct
     4081 aggaagagcc ttgcgatggc gggccgattt tcggcgcgcg cccccgcggc aggacgagct
     4141 gttgcatgaa cccctccatg aactggaagc ggttccggag ggtcacctcg ctgacgccgg
     4201 cgatctttgc gattgccttc tgagggcggc gctccccgca cgaaagggac gcgaggtaga
     4261 tcgcggccgc tgcggtaccc gacggggaga gggacatcga gctgtcgatc ttctcgagtt
     4321 ccttgaggat cttctgggcc tcggcctcga ccgtgttcga tagcccgagc ctcgagcaga
     4381 atcggctcac gtagttcatc ggacgggacg gcgggacgcg caacgtcagg gtccggagca
     4441 atgctccgta tgccttgccg atcgtcttct tgcggacccc cgtcacctgt tgcagttcat
     4501 ccaaggtcct cgggacgcca tcgatccggc atgcggcgta cacggcggcg gcgacgatcg
     4561 cctcgatcga ccgaccgcgc acgaggccct tctcgagggc cttcttgcag atgaatccgg
     4621 cttcgtcctt caccggacgg ggcaggccca tcagcgaggc gacgcggtcg agcgaccgaa
     4681 tcgtctccgg caaacttcgc tctccggggc gcgagtggcc agagtgacgt tggagttttc
     4741 gcatccggta gaacttctct cgctcacgca acgggatcgt gttgccgcgc gcgtccttgt
     4801 tcgcgagagg aatcacggtc gtgagtcccg acgcgccggc gacgtagctc cgaggagcgc
     4861 ccgtccgcgc gaggcggtcg ttctcttcga cggagtacgc ggaccactcc ggtccttcat
     4921 cgatcgcacc ttcgctgatc acgaggccgc acgaatcgca cacgagctcg ccgcgcgcgt
     4981 agtcgcgcac gaggtgctcg ctcccgcatt cagggcagac ccggtcttct tcgacgaccg
     5041 gttccgccgg cgtactgctc ggcatggcca cccttctggt cggcttgtgc tcccgagact
     5101 cgatcgtcct aattataacg cgcttatatg ataccttgtc atcgtacgca gtgacagcct
     5161 gggtcacgtc cggcccagat ggagtaggcg atggcggata ggacgaagga cgtcctaagc
     5221 gtcagtgacg cggatatggc gggctccgaa ggtcgggtcc gagcctcgct gcgagggatt
     5281 ctagcaccgc ctccgaagtc gccagcgcac cgtccaggac ccgctcctcg ccttgggata
     5341 cgtacgaatc attggcaatg ttaatgcccc gcgggctctg tcggccacgt cggcgtatcg
     5401 aatggcggac ttccgcgtcg agaaagattt cctgggggag gtcaaggtcc cgaaggacgc
     5461 gtactggggc gtccagaccc agcgtgcaat cgagaacttc ccgatcagcg ggatccggtt
     5521 cggccggcgg ttcatctacg cgctcggcct gatcaagatg gcgtgcgccc agacgaacat
     5581 ggagctcggg ttgctcgacg ccaagatcgg caaggcgacg gtccaggcgt gccaagaggt
     5641 catggacggg aaactggacg cacagttccc cctcgacatc ttccagaccg ggagcgggac
     5701 ctcgacgaac atgaacgcga acgaggtgat cgcgaaccgc gcgaacgaga tcctggggca
     5761 cccgctcggg gagaagggac cggttcaccc gaacgaccac gtgaacatgg gccagtcctc
     5821 gaacgacgtc atcccgacgg ccatccacgt cgccgccttg ctggagatcg accacggcct
     5881 gctgccggcg ctccgcgaac tcgaggacag cctcgcgaag aaggcgaagg agttcgatcc
     5941 gatcgtgaag gcgggacgga cgcatctgat ggacgccacg ccgatccggc tcggccaaga
     6001 gttttcgggg taccagtccc agatcgacca cggaattcgc cgcgtgtccg cggcccgggc
     6061 ggccctcgcg gaactcgcca tcggcgggac cgccgttggc acaggaatca atgcccatcc
     6121 ggacctgccc ggccgcgtcg tcgagaagat cagcggcgcg acgaacacga aattccgggt
     6181 cgccgagaat cactttgagg cccaggcggc gcgcgatgcg ttggtcgaag cgagcggcgc
     6241 catccggacc gtcgccatct cgatgatcaa gattgcgaac gacctgcggt ggctcgggtc
     6301 cggacctcac accggcctgc gcgaactgaa cctcccggcg gttcaaccgg gttcgtcgat
     6361 catgcccggg aaggtcaacc cggtgatccc cgaggccgtc atgcaggtcg gcgtcacggt
     6421 gatcggcaat gatgtagcga tcgcggtcgc gaacacccac tcgaacctcg atctctcgac
     6481 gatgatgccg gtcatgtcgc aacggattca gcagaacatc gagctcctcg cgaacgtcgc
     6541 gcgcgtcttc gcgcaccggt gcatcgacgg gatcaccgcg aacgtggagg tcctccggcg
     6601 ctacgcggaa tcgagccctg cgatcgcgac gaagctgaat ccgatcatcg ggtacgagaa
     6661 ggcggccgag atcgcgaagg aggccggcca gaccgggaag acggtcaagc agctcgtcat
     6721 cgagaaaggc atcttgagtc cggaggaag
//
LOCUS       DATLMA010000372         2019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_763283, whole genome shotgun sequence.
ACCESSION   DATLMA010000372 DATLMA010000000
VERSION     DATLMA010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763283"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..468
                     /locus_tag="VNA10_04785"
     CDS             259..468
                     /locus_tag="VNA10_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37026.1"
                     /translation="MQPWQAVSELSQYRTWIRQNIRGLLDSISITEKLDPEIVLHVLD
                     ALHCDAMGGKAAGDACLLGLVGVGR"
     gene            complement(875..1207)
                     /locus_tag="VNA10_04790"
     CDS             complement(875..1207)
                     /locus_tag="VNA10_04790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37027.1"
                     /translation="MSTPEEKIRVLKDSIREEPDDPLGYYLLGMESAKLLRHLDAIDA
                     FERAIRISPDYTAAYRELGKSLREAGRRHEAADVLGHGVVVAERTHDVQTMKEMLVFL
                     KHLKEEPL"
     gene            complement(1340..>2019)
                     /locus_tag="VNA10_04795"
     CDS             complement(1340..>2019)
                     /locus_tag="VNA10_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007314540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HVG37028.1"
                     /translation="ATGGKLVTKLDELAKDDLGFAKLVYEKKIAEDEMTFVTGCKNPR
                     AVSILLRGGTEHVVDELERSVEDATSVVAVAIEDGKVITGGGSSATEIALGLRDMAAT
                     VGGREQFAIQAFADAVEVIPRTLAENAGLDPIDILIALRKAHKQGNKYAGINVFSGKV
                     SDMKKENVIEPLRVGTQAISSATDAAVMILRIDDVIASKGGGGAGPGAAGKGGEGGEG
                     GGEGEEF"
BASE COUNT          363 a          620 c          645 g          391 t
ORIGIN      
        1 gaccttccgc gttgcgaagg ggaaggagcc aaaacctttc gcctggcagt ttaggacaag
       61 ggagtaggcc cggctgaagg gcgttctaaa tcccgcggag atccggtcgc tcctccggcg
      121 tcactaacgt gatcgctcgc gcgggggatt gcgcctacag gtttcgcccg aagctattat
      181 caataggcat cagcgctgac aggtcgacgc gctgcgggag cggagcgtag actctgacca
      241 gaggaggagg cgaagaagat gcaaccttgg caagccgttt cggagctgag tcagtatcgg
      301 acctggattc gccagaacat tcgagggctc ctggactcca tctcgatcac ggagaagctc
      361 gatcccgaga tcgttctcca cgtcctcgac gcccttcatt gcgacgcgat gggaggcaag
      421 gccgcggggg atgcatgtct cttgggcctc gtcggcgtgg ggcgctgagc gcctcgtgtg
      481 ggaagagatt gaaagcccgg cagggtaatc gtcgccgacg aaagcaaatt cagtcactag
      541 acacggttgg aacagtggcg gtgtccgacc agccctgctg tcgcagagtg gggtttcctc
      601 tcggcgtcaa gtgcgcgttg aacgaggggc atcaggcact cctcaggctt gttcgaaccc
      661 tgaaatcgct gacagaaatg acggaatttc ggatcgcaga tacaggccaa gtcgaggact
      721 tgaaagccgc tgcgaaagcc ctgagggaac ggggttggga tccggacggg agaccgttcg
      781 agattccgaa cggcccgtgc tacgtcctcg acgacccccg cgggaagcgc ttcggtttct
      841 tcgagaacgt ccggccgaaa gcgttcgagc gaaatcacaa tggctcttcc ttgaggtgct
      901 tcaggaagac gagcatctct ttcatggtct ggacgtcgtg ggtccgttcc gcgaccacga
      961 ctccgtggcc gaggacgtcg gcggcctcgt gccgccgccc ggcttcccgc agggacttgc
     1021 ccagctcccg gtacgcggcg gtatagtccg gactgatgcg gatggcccgc tcgaatgcat
     1081 caatcgcgtc cagatgccgc aggagcttgg cggattccat gccgaggagg tagtacccaa
     1141 ggggatcgtc cggttcctcg cggatggaat ccttcaggac gcggattttt tcctcggggg
     1201 tcgacatggg cgatcgaacc ggaatagatt ccctgaccca tgaatcctct ggacgttcct
     1261 ggttccgccc ggaaagtccg aaggagaaac gctcggttag acgttgcaac tccaggcggt
     1321 cgacagaggc cgggggcact cagaattctt cgccttcgcc tccaccttcg ccgccttcgc
     1381 cgcccttgcc ggcggcgccc ggacccgcgc ctccgccgcc cttggacgcg atgacgtcgt
     1441 cgattcggag gatcatgacc gccgcgtccg tcgcggagga gatcgcctgc gtcccgaccc
     1501 ggagcggctc gatcacgttc tccttcttca tatcggagac cttgccgctg aagacgttga
     1561 tcccggcgta cttgttgccc tgcttatggg ctttgcggag tgcaatgagg atgtcgatcg
     1621 ggtcaaggcc cgcgttctct gcgagggtcc gcgggatgac ctcgacggcg tccgcgaagg
     1681 cctgaatcgc gaactgctcc cggcccccaa cggtggccgc catgtcccgg aggccgaggg
     1741 cgatctccgt cgcactcgag ccgccgcccg tgatgacctt gccgtcctcg atggccacgg
     1801 cgacgacgct cgttgcgtct tcgacggagc gctcaagttc gtccacaacg tgctccgtac
     1861 caccccggag caagatcgag accgcgcgcg ggttcttgca gcctgtgaca aaggtcatct
     1921 cgtcctcggc gatcttcttc tcgtagacga gcttggcgaa gccgaggtcg tccttggcca
     1981 gttcatcgag cttcgtgacg agcttgccac ccgtggcct
//
LOCUS       DATLMA010000373         1112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_158372, whole genome shotgun sequence.
ACCESSION   DATLMA010000373 DATLMA010000000
VERSION     DATLMA010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158372"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VNA10_04800"
     CDS             complement(<1..726)
                     /locus_tag="VNA10_04800"
                     /EC_number="3.4.21.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011523130.1"
                     /note="PtrB; oligopeptidase that cleaves peptide bonds
                     following arginine and lysine residues; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
                     /protein_id="HVG37029.1"
                     /translation="MTTWFALALGIYASLAASPSSIEAPKPPSARREPKVDVVHGEKR
                     QDDYFWLRRKEDPQVRAHLEAENAYTDAVMKPTEGLQEAFYSEMLGRIKETDLSVPYR
                     KGDFFYYSRTEKGKQYSISCRKKGTLDAPEEVMLDANELARAEKFFALGDVEVSDDGN
                     LLAYSTDVTGFREYTLFIKDLRTGALAPEVFRKVSSFAWAADNRTLFYVVDDAAKRPY
                     RLYRHVLATETTADPLVYEEKDEK"
     gene            815..>1112
                     /locus_tag="VNA10_04805"
     CDS             815..>1112
                     /locus_tag="VNA10_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013581451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37030.1"
                     /translation="MKQLKSVMFSILFVLAMSVRALADTGHEHKEGDPTKLGKVHFPI
                     SCSAASQKKFDVGLAMLHSFWYAKSDKAFAELAAADPGCAMADWGVAMSRFHQIW"
BASE COUNT          185 a          352 c          357 g          218 t
ORIGIN      
        1 cttctcgtcc ttctcctcgt agacgagcgg gtcggctgtg gtctcggtcg cgaggacgtg
       61 ccggtagaga cgataggggc gcttcgccgc gtcgtccacg acgtagaaga gtgtccggtt
      121 gtccgcggcc cacgcgaagg agctcacctt ccgaaacact tcgggcgcga gcgcgcccgt
      181 gcgcaggtcc ttgatgaaaa gcgtgtattc ccgaaaaccg gtgacgtcgg tcgagtaggc
      241 gagcaggttt ccgtcgtcgc tgacctcgac gtccccgagg gcgaagaact tctcggcgcg
      301 agcgagctcg ttggcgtcga gcatcacctc ttcgggcgcg tcgagggttc ccttcttccg
      361 gcaggagatc gaatactgct ttcccttctc ggtccgcgag tagtagaaaa agtctccctt
      421 ccggtacggg acgctcaagt cggtctcctt gatccgcccg agcatctcgg aatagaacgc
      481 ctcctgaagg ccctcagtcg gcttcattac ggcgtccgtg taggcgttct cggcctcgag
      541 atgcgcgcgc acctgcgggt cttccttccg gcgaagccag aagtagtcgt cctggcgctt
      601 ctcgccgtga acgacgtcca ctttaggctc ccgccgcgcc gagggcggct tcggcgcttc
      661 gatggagctc ggggacgccg ccagggacgc gtagatcccg agcgcgagcg cgaaccaggt
      721 cgtcattggg cctccgcatc ggtcagaaaa ggggcgggat catatcccgc gccggcgcgc
      781 atctcgtaaa atccggtccc tccggaggca tcccatgaag cagctgaagt ccgtgatgtt
      841 ctcgatcctg ttcgttctcg cgatgtccgt gcgagcgctc gccgacaccg gccacgagca
      901 caaggagggc gatccgacga agctcgggaa agtgcacttc ccgatctcct gcagcgccgc
      961 ctctcagaag aagttcgacg tcgggctcgc gatgctgcat tccttctggt acgcgaaatc
     1021 ggacaaagcg ttcgccgagc ttgcggcggc cgatccgggc tgtgcgatgg ctgactgggg
     1081 agtcgcgatg agccgcttcc atcagatctg gg
//
LOCUS       DATLMA010000374         1142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_763367, whole genome shotgun sequence.
ACCESSION   DATLMA010000374 DATLMA010000000
VERSION     DATLMA010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763367"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VNA10_04810"
     CDS             <1..779
                     /locus_tag="VNA10_04810"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HVG37031.1"
                     /translation="VRLILGVDAETRVQRAEAAGARAVHPGMDGPRAGLRGGRTMEGY
                     QGTGHHDPQAPLARIDRDSQLVDALRVGEATAADLLVATYGDRAYRVAIGITRNVQDA
                     EEAVQDSFWSVVRKIETFRGDSSFGSWIYRITANAAYQKLRSRARRRDEISLDEVLPS
                     FHEDGRHAGPISDWSARIDDPTVQTELRAALDSAIGELPADYRAVIVLHDVEGLSMAE
                     VAGSVGITVVTAKSRTHRARLFLRRRLAKFMADLEAPATS"
     gene            791..>1142
                     /locus_tag="VNA10_04815"
     CDS             791..>1142
                     /locus_tag="VNA10_04815"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HVG37032.1"
                     /translation="MELTVNGKTRQVDVKNGSHMKNAKELLEEFTAASFRDPRKAAET
                     FTEDGVFEMPYLESFGIPGRYEGRQAIEGFFRFVREVYPDMDLENVKVMIETPEQAFA
                     EYEFTAQSSKTGRTI"
BASE COUNT          235 a          326 c          391 g          190 t
ORIGIN      
        1 tggtgcggct gatcctcggt gtcgatgcgg aaacgcgggt gcagcgagca gaagctgcgg
       61 gcgcgcgcgc cgtacatccg ggcatggatg gaccgagagc ggggctgagg ggagggagga
      121 ccatggaagg gtatcaagga acggggcatc acgatccgca ggccccactg gccagaatcg
      181 accgtgattc gcaactcgtg gacgcgttgc gtgtgggcga ggcgactgcc gccgaccttc
      241 tcgtcgctac atacggcgac cgggcgtatc gcgtggcgat cgggatcacg cggaacgtgc
      301 aggatgccga ggaagccgtc caggactcgt tttggagcgt ggtccggaag atcgaaacgt
      361 tcaggggaga ttcgtccttc ggatcctgga tctaccggat caccgcgaac gccgcgtacc
      421 agaagctgcg tagccgcgcg cgccgacgtg acgagatctc gctggacgag gttctcccgt
      481 cattccacga ggatgggcgg cacgccggcc cgatcagcga ctggtcggcg agaatcgacg
      541 acccaaccgt gcagacggaa cttcgggcgg cgctggactc ggcgatcgga gagctcccgg
      601 ccgattatcg cgccgtgatc gtcctgcacg acgtggaagg cttgtcgatg gccgaggtgg
      661 caggctccgt agggatcacg gtggtgacgg caaagtcccg cacccaccgc gcccggctgt
      721 ttctgcgcag acgcctggcg aagttcatgg ccgacctgga agcacccgcg acatcgtaag
      781 gagggcagcg atggaactca cggtcaacgg taagacgcgt caggtcgacg tgaagaacgg
      841 atcacacatg aagaacgcaa aagaattgct ggaggagttc accgctgcct cgtttcggga
      901 cccgaggaag gcagcggaga cgttcaccga ggatggcgtc ttcgagatgc cctacctcga
      961 gagctttggc attccgggac ggtacgaagg tcgtcaagcc atcgagggtt tcttccgctt
     1021 cgttcgcgaa gtctatcccg acatggacct tgagaatgtc aaagtcatga ttgaaacgcc
     1081 tgagcaggcc tttgctgagt acgagttcac cgcgcaatcg agcaagaccg gacgcaccat
     1141 cc
//
LOCUS       DATLMA010000375         1002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_880225, whole genome shotgun sequence.
ACCESSION   DATLMA010000375 DATLMA010000000
VERSION     DATLMA010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880225"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..231)
                     /locus_tag="VNA10_04820"
     CDS             complement(34..231)
                     /locus_tag="VNA10_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37033.1"
                     /translation="MIAPLLAVDWNVTSWNSSPARFAKVNVREDGESKITTPVPATQF
                     VEVLLFDQEPANVQVPLPIRK"
     gene            239..>1002
                     /locus_tag="VNA10_04825"
     CDS             239..>1002
                     /locus_tag="VNA10_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37034.1"
                     /translation="MAANGLRWSGLLLIQDSAGSTTTLATSNISLTGGSLAVGNSGVL
                     IANASSVAVVDVATIGGASGTLTLTSGSWTVRGQWNTSGAGSTFARGTSTVTMSGTSA
                     IVATLDATNGFNNLVISGTITQNTALEVRGTLSVTGRLTTSGNNITGGANLAISGGGS
                     LIGTASSIVVSGVTMNDTGTNSISMTTGSISASGSWDTSGSSSAFTAGSSTVTLTAAS
                     GTIALGPAQALASLIIAGNVSLASPVTVSSLTISSGG"
BASE COUNT          176 a          336 c          302 g          188 t
ORIGIN      
        1 cgccggtgac acgtcaatca cgagtatgtc ggcctacttc cggatgggca gcggcacctg
       61 gacattcgca ggctcctggt cgaacagcag cacctcgacg aactgggtcg caggaaccgg
      121 cgtcgtgatc ttcgattctc cgtcttcgcg aacgttgact tttgcgaatc tcgcgggcga
      181 cgaattccac gatgtgacat tccagtccac ggcgagcagc ggcgcaatca ccttctcgat
      241 ggcggcgaac ggcttgcgct ggagcggact cttgctaatc caagattccg caggatcgac
      301 gaccacgctg gcgacatcga atatctccct caccggcgga tcccttgccg tcggcaactc
      361 gggggtcctc atcgcgaacg cgtcaagcgt cgccgtggtc gacgtcgcga cgatcggcgg
      421 cgcgtcggga acgctgaccc tcacgagcgg gtcttggacc gtgagggggc agtggaacac
      481 gtcgggcgcc ggttcgacat tcgctcgggg cactagcacg gtcacgatgt cgggcacgtc
      541 ggcgatcgtc gcgaccctcg atgccaccaa tggattcaac aatctggtta tctccggcac
      601 gatcacccag aacaccgcgc tcgaggtgcg cggcacactg tccgtcacgg gcaggctcac
      661 cacatcggga aataacatca ccggcggcgc caacctcgcg atctccggag gcgggagcct
      721 gatcgggacc gcgtcttcga tcgtcgtctc cggggtgacg atgaacgaca ctgggacgaa
      781 ttccatttcc atgacgaccg gctcgatttc cgcgtcgggc tcatgggaca cctccggatc
      841 gtcctcggct ttcactgccg gctcgtccac ggtgaccctc accgccgcct ccggaacgat
      901 cgcactcggg cccgctcaag cgctcgcatc gttgatcatc gcggggaacg tctcgttggc
      961 atctccggtg acggtctcct ccctcaccat ctcctcgggt gg
//
LOCUS       DATLMA010000376         1186 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_158487, whole genome shotgun sequence.
ACCESSION   DATLMA010000376 DATLMA010000000
VERSION     DATLMA010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158487"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VNA10_04830"
     CDS             <1..388
                     /locus_tag="VNA10_04830"
                     /inference="COORDINATES: protein motif:HMM:NF014378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37035.1"
                     /translation="DEKTGEPEVFLEPLLWGLFSLGGFITAFLFPITVFLLFVAPVFG
                     LWPTDPAAYATFAAHWQEPLVRIFFFALIGGSLFHGTHRLKFMLVDAGLRGPGIEAAL
                     DIILNVIAIVGTLGALYYAVRGWLFV"
     gene            complement(312..761)
                     /locus_tag="VNA10_04835"
     CDS             complement(312..761)
                     /locus_tag="VNA10_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37036.1"
                     /translation="MPLERKKVGEVFHFYTKIGVAAIRVTDDGIAIGDTVQIQGPSTN
                     LEQTVEVLQIEHALVSRAGPGQEVGMKVRDRVREKDFVYKLIPMEGPVQAPPPKGAPK
                     PPARKAPAKKARAKKAARKKAPVRRKASRAPRSKARRASRRSRSRSR"
     gene            896..1111
                     /locus_tag="VNA10_04840"
     CDS             896..1111
                     /locus_tag="VNA10_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010917333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain-containing protein"
                     /protein_id="HVG37037.1"
                     /translation="MVMPLNVLEKSINKRVQLLLKDNRILEGKLVGYDDYMNMVLEDT
                     EETKEDNVRRVGTVVLRGNNVVTIVPK"
BASE COUNT          195 a          379 c          361 g          251 t
ORIGIN      
        1 ggacgagaag accggcgagc ccgaggtctt cctcgagccg ctcctgtggg gcctcttctc
       61 cctgggcgga ttcatcaccg cgttcctgtt tccgatcacc gtcttcctgc tgttcgtcgc
      121 cccggtgttc ggattgtggc cgaccgatcc cgcggcctac gcgacgttcg cggcccactg
      181 gcaggagccg ctggtccgca tcttcttctt cgccctcatc gggggctcgc tcttccacgg
      241 gacccatcgg ctgaagttca tgctcgtgga cgcgggcctg cgcggtcccg gaatcgaggc
      301 ggccctcgac atcatcttga acgtgatcgc gatcgtcggg acgctcggcg cgctttacta
      361 cgcggtgcgc ggctggcttt tcgtctgacc ggcgctttct tccgcgctgc cttcttggcg
      421 cgcgccttct tcgcgggtgc cttcctcgcg ggcggtttgg gggccccctt cggtggcggt
      481 gcctggaccg gcccttccat cgggatcagc ttgtagacga aatccttctc ccgcacccgg
      541 tcgcggacct tcatgccgac ctcttgtccc gggcccgcgc gcgacaccaa ggcgtgttcg
      601 atctgcaaga cctcgacggt ctgctccaag ttggtcgacg gcccctggat ttggaccgtg
      661 tctccgatcg caattccatc gtcggtgacc cgaatcgcgg cgacgccgat cttcgtgtag
      721 aaatggaaga cttcgccgac cttcttccgt tcgagaggca tcgcggatgc atgggtccgc
      781 cgcgataaat acgtggcgac tccatcgcgc cgtcgtctct cgataggatg gcgcaagaaa
      841 agtcttaagt gcattcagag tttacggcgc gccggaaggg gggacagatc cttctatggt
      901 gatgcctctt aacgttctag aaaaatccat caacaagcga gtccagctcc tgctcaagga
      961 caaccgcatc ttggaaggga agctcgtcgg ctatgacgac tacatgaaca tggtcctcga
     1021 ggacacggaa gagacgaaag aggacaacgt ccggcgggtc ggcacggtcg tcctccgggg
     1081 aaacaacgtc gtcacgattg tccccaagtg agcggcgagg ccagaaaata gataaccggg
     1141 cccctgcttt gtagcgcgga tgcagctcgt gatcatcgcg ggcggc
//
LOCUS       DATLMA010000377         1067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_580486, whole genome shotgun sequence.
ACCESSION   DATLMA010000377 DATLMA010000000
VERSION     DATLMA010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580486"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VNA10_04845"
     CDS             complement(<1..428)
                     /locus_tag="VNA10_04845"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37038.1"
                     /translation="MNRILADVSAFGRQYLRSRVGTFFALAFPVILILLFGAIFSSSG
                     TPRVSLAVQDMDRTVASRGFVQALNNTTLISYQAIPPTANFQEYMRAHSINVALQIPS
                     GFQATIVQAEMGNASARVNVTLAGDPTQSSFGIAYSAVAAV"
     gene            complement(425..>1067)
                     /locus_tag="VNA10_04850"
     CDS             complement(425..>1067)
                     /locus_tag="VNA10_04850"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37039.1"
                     /translation="VAYWAHLFDHDVSDEAVASIIETVGLSGRADTFALNLSGGEKRR
                     LGIAMALVGQPDLLFLDEPTTGLDPGARRELWTLIGDLRRKGRTILLTTHYLDEAEQL
                     ADDVAIMNHGKIVAHGSPSALISQFGEGTTIVLAGAGLGGSQALTARGIAAELHGADV
                     FVHVPIASQVRPMLAKLASIEIPLTEIYTKRSTLEDVFLKLVGARMEEGVLAA"
BASE COUNT          186 a          346 c          352 g          183 t
ORIGIN      
        1 accgcggcca ccgccgaata cgcgatgccg aacgaggact gggtcgggtc ccccgcgagc
       61 gtgacgttca ctcgggcgct ggcgtttccc atttcggcct ggacgatcgt cgcctggaat
      121 ccgctcggaa tctggagcgc gacgttgatc gaatgcgccc gcatgtactc ctggaaattc
      181 gcggtcggcg ggatcgcttg gtagctgatc aaggtcgtat tgttcaacgc ctgaacgaat
      241 ccccgcgagg cgacggtgcg atccatgtcc tggacggcga gcgagacccg aggggttccc
      301 gacgagctga agatcgcccc gaacaggagg atcaggatga cggggaacgc gagggcaaag
      361 aacgtcccga cgcgggaccg aaggtactgc cggccgaacg ccgagacgtc tgcgaggatc
      421 cgattcatgc cgcgagcact ccctcttcca tccgagcccc aacgagcttg agaaacacgt
      481 cttccaaggt cgagcgcttc gtgtaaatct ctgtcaaggg tatctcgatg gaagccagct
      541 tcgcgagcat cggccggacc tggctcgcga tcgggacgtg cacgaacacg tcggcgccgt
      601 ggagctccgc ggcaattcca cgggcggtca gggcctgcga tcctccgagt cccgcgccgg
      661 cgagcacgat cgtcgttccc tctccgaact gggagatgag cgcggacgga ctcccatgcg
      721 ccacgatctt gccgtggttc atgatcgcca cgtcgtcggc gagctgctcc gcttcgtcaa
      781 ggtagtgcgt cgtgaggagg atcgtccgcc ctttccgtct gaggtctccg atcagcgtcc
      841 agagttcccg ccgtgcgccc gggtcgaggc ccgtcgtcgg ctcgtcgagg aacaggaggt
      901 ccggctgccc gacgagcgcc atcgcgatcc cgaggcgacg cttctcaccg ccggacaggt
      961 tcagcgcgaa cgtgtctgcg cggcccgaga gcccgaccgt ctcgatgatg ctcgcgaccg
     1021 cctcgtcgga cacgtcgtgg tcgaataggt gtgcccagta ggcgacg
//
LOCUS       DATLMA010000378         2130 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_825133, whole genome shotgun sequence.
ACCESSION   DATLMA010000378 DATLMA010000000
VERSION     DATLMA010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825133"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..948
                     /locus_tag="VNA10_04855"
     CDS             <1..948
                     /locus_tag="VNA10_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008441988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG37040.1"
                     /translation="PAETLEKMRVLADDFKQALKEIEPSAMREVLVEVPRVNWSDVGG
                     LEDVKMKLREAVEMPLKEPEAFKRMGIRPPRGILLYGPPGSGKTLLAKAVATESEANF
                     ISIKGPEVMSKWVGESEKAVRMIFKKAKQVAPCIVFLDELDAIAHVRGFDTDSGVSER
                     VVNQLLTSMDGLESLEGVCVIGATNRPDRLDPAMLRTGRFDRILLVPTPNRDARLAIL
                     KVHTRTMPLEGVDLEELAVDLDSYSGADIEGLCREAAMIALREAKHAKKVTTAHFQEA
                     MKVVRPSIDADTVKFYEEFDKKFKKGIDRGRREENILYR"
     gene            999..1670
                     /locus_tag="VNA10_04860"
     CDS             999..1670
                     /locus_tag="VNA10_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37041.1"
                     /translation="MLRPGSPWRTGITRVLALGPSRIALGLAIVLVLVSLAFPFWSLS
                     AAMGTDQNISSFSWTTFTTDRYVRGVWDGTVILPYSSTFSPYRAVANVLGTAYLLDLV
                     FLVVLAVVLALFSMEYGRSMPTLSLLILSLIVLAVALFALFYPIVAIPGAATEDVGAF
                     TIGGFWGSASTSTPPTGWSWGPGLGWWILLLAAILGTAGAVFPYVKSVRAMIPAPPPG
                     WRPSS"
     gene            1786..2022
                     /locus_tag="VNA10_04865"
     CDS             1786..2022
                     /locus_tag="VNA10_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HVG37042.1"
                     /translation="MKKFATELRGKTVMTNDGQILGTIENFIVNTKSGKLSDVLVLPA
                     ENVAMKGMKTDPEGRLILPFQGMRAVKDVVVMNL"
BASE COUNT          371 a          679 c          681 g          399 t
ORIGIN      
        1 cctgcggaga ccctcgagaa gatgcgcgtc ctggccgacg acttcaagca ggctctgaag
       61 gaaatcgagc cgagcgcgat gcgcgaagtc ctcgtcgagg tgcctcgcgt gaactggtcc
      121 gacgtcggcg gcctcgaaga cgtcaagatg aaactgcgcg aggcggtcga gatgcccctc
      181 aaggaaccgg aggcgttcaa gcgaatgggc atccgcccgc cgcggggcat cttgctgtac
      241 ggtccgcccg ggtccggcaa gaccctcctc gcgaaggccg tcgccacgga atccgaagcg
      301 aacttcatct cgatcaaggg acccgaggtc atgtcgaaat gggtcgggga atccgagaag
      361 gccgtccgca tgatcttcaa gaaggcgaag caggtcgcgc catgcatcgt cttcctcgac
      421 gagctcgatg cgatcgcgca cgtgcgcggc ttcgacacgg acagcggcgt gagcgaacgc
      481 gtggtcaatc agctcctgac ctcgatggac ggactcgagt ccctcgaagg cgtctgcgtc
      541 atcggcgcga cgaaccggcc ggaccggctc gacccggcga tgctgcgaac gggccgtttc
      601 gatcggatcc tcctggtgcc gacgccgaac agggatgcac ggctcgcgat cctgaaggtc
      661 cacacgcgca ccatgcccct cgaaggtgtc gacctggaag agctcgcggt ggacctcgac
      721 agctactccg gtgcggacat cgagggcctg tgccgcgagg ccgcgatgat cgcgttgcgc
      781 gaggcgaagc acgccaagaa ggtcacgacg gcccacttcc aggaagcgat gaaggtcgtg
      841 cgcccgagca tcgacgcgga cacggtcaag ttctacgagg agttcgacaa gaagttcaag
      901 aagggcatcg accggggtcg ccgggaagag aacatccttt atcgctgagc gatccctcag
      961 cggacgttat ttatccacct ctctccttgg ggagtccgat gctccgtccg ggctcaccgt
     1021 ggcgaacggg gatcacccgc gtgctcgcac tggggccctc gcggatcgcg ctcggtctcg
     1081 cgattgtctt ggtcttggtg tccctcgcct tcccgttctg gtcgctctcc gcggctatgg
     1141 gcaccgacca aaatatcagc tcgttctcct ggacgacctt caccacggac cgctacgtcc
     1201 gtggagtctg ggacgggacc gtgattctcc cctattcgtc gaccttttcg ccatatcgcg
     1261 ccgtggcgaa tgtcctcggt accgcgtact tgctcgacct cgtattcctc gtcgtcctcg
     1321 ccgtcgtcct cgccctcttc tcgatggaat acggccgatc gatgccgacg ctcagcctgc
     1381 tgatcctgag cctcatcgtc ctcgcggttg cgttgttcgc cctcttctac ccgattgtcg
     1441 cgattccggg tgccgcgacc gaggacgtcg gcgcattcac gatcggcggc ttctgggggt
     1501 ccgcgagcac ttcgacccca ccgaccggtt ggtcgtgggg gccggggctc ggctggtgga
     1561 ttctcctcct ggccgcgatc ctggggaccg ccggcgccgt cttcccgtac gtgaagagtg
     1621 tgcgcgcgat gattccagcc ccgccgccgg gatggcgtcc ctcctcctga gtcgatccat
     1681 cgcggcggaa tcttcatata gagcgcgtca gatgtctgtc agacaaaggg atgggatcca
     1741 tcgcggcggt gccgcggggg acctctcacc gatgcgggtg atgggatgaa gaagtttgcc
     1801 accgagcttc ggggcaagac cgtgatgacg aacgacggtc agatcctggg gaccatcgag
     1861 aacttcatcg tgaacacgaa gagcgggaag ctgtccgacg tcctcgtgct gccggccgag
     1921 aacgtggcca tgaagggaat gaagacggat cccgagggcc ggctgatctt gccgttccag
     1981 ggcatgcggg ccgtgaaaga cgtcgtcgtg atgaatctct aggccccgcc gttcggctca
     2041 gagcaggacg cgtcgctcct ccttcaccac gttgaggacc acctgcgtgt atgtgttctc
     2101 gacgtactcc atcgagccga ggcgcttgat
//
LOCUS       DATLMA010000379         2903 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_37151, whole genome shotgun sequence.
ACCESSION   DATLMA010000379 DATLMA010000000
VERSION     DATLMA010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37151"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1159
                     /gene="glnA"
                     /locus_tag="VNA10_04870"
     CDS             <1..1159
                     /gene="glnA"
                     /locus_tag="VNA10_04870"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014512800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HVG37043.1"
                     /translation="DVYEGGSHERFTRDSRYMAQRAAQFAADQGYDTTYWGPEIEFFV
                     FDGIRLVPSADSARNPWSGAGYEIISREAPWSDSGGKEFPIRFKEGYYPAPPVDSLQD
                     YRNEACRVLIESFGMTLDAHHHEVATAGQCEIDMRYDELVPMADNVVTYRYVMKMVAH
                     KMGMMATFMPKPIFGDNASGMHVHQSLWTKGKNMMYDPKDEYAEISQTCRYYIGGLME
                     HARSLCAFTNPTTNSYRRLVPGYEAPVFIAWSKRNRSANIRIPMYYQGIEAAKRIEYR
                     TPDPACNPYLSFAAMLCAGLDGVKRKIDPGNPVDEDLYHLSASKRKEYGVRELPGSLK
                     ESIEHLQTDYMFLKTVFPQDLLEKYEELKLDEHLQTSLRPSPYEFYRYMDA"
     gene            1314..1859
                     /locus_tag="VNA10_04875"
     CDS             1314..1859
                     /locus_tag="VNA10_04875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HVG37044.1"
                     /translation="MASVQVFLDNWFMRHLGSLKTTMRVIFGVVWIIDGAFKFQPGFA
                     DSLAQMVSDAGQGQPSWLQPWFGFWSQTVSGSPGFFVTTIGALELALGFALLLGFMRK
                     VAYTAGIFLSLIIWSVPEGFGGPYGPSSTDIGTGIIYAFVFLLLMIINAAFGPSRWSL
                     DYAIERRWPAWKKVSEIRSVA"
     gene            1939..2316
                     /locus_tag="VNA10_04880"
     CDS             1939..2316
                     /locus_tag="VNA10_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37045.1"
                     /translation="MAELKDDITEERRILKEAGILDEKLLEKMDIFPGDRVRFRFYYP
                     HSGFEEMIGHFLGFYTLYEGPEGGGDLNLVIRTVKDGRTTVVYKDRNYLEEYEILEPN
                     PKVRDKIRDLDARHGRHVGHEFG"
     gene            complement(2321..>2903)
                     /locus_tag="VNA10_04885"
     CDS             complement(2321..>2903)
                     /locus_tag="VNA10_04885"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HVG37046.1"
                     /translation="PNAMATGRNPQHAVVAVTQGILTLLTEDELRGVLAHEISHVRNR
                     DILVMSVAATLAGAISFMARMFGWNMLFGGGSRDRNGNAGTLILALVGMILAPIAAIL
                     VQLAISRSREYKADYSGAKTIGQPLALASALEKLEVANKRRPFTFGSPASQSLFIVNP
                     FAAGAFVRMFSTHPPIQERIARLKALAQGVDKY"
BASE COUNT          569 a          909 c          923 g          502 t
ORIGIN      
        1 cgacgtctac gagggcggca gtcacgagcg tttcacgcgg gactcccgat acatggcaca
       61 acgcgctgcc cagttcgccg cggatcaagg ctacgacacc acgtattggg gcccagaaat
      121 cgagttcttc gtgttcgatg ggattcggct cgttccatcc gcggacagcg cacgcaaccc
      181 gtggtccggc gccggctacg agatcatctc gcgggaagcg ccgtggagcg acagcggcgg
      241 aaaggaattc ccgatccgtt tcaaggaggg ctactacccc gctccgcccg tggacagcct
      301 gcaggattac cgcaacgagg cctgccgcgt cctcatcgaa tcctttggca tgacgttgga
      361 cgcacaccac cacgaggtcg ccacggccgg gcagtgcgag atcgacatgc gatacgatga
      421 gctcgtgccc atggcggaca acgtcgtcac gtaccgatac gtgatgaaga tggtcgccca
      481 caagatgggc atgatggcga cgttcatgcc gaagccgatc ttcggcgaca acgcgagcgg
      541 gatgcacgtc caccagagcc tctggacgaa aggcaagaac atgatgtatg acccgaagga
      601 cgagtacgcg gagatcagcc agacgtgccg gtactacatc ggagggttga tggagcacgc
      661 ccgcagcctg tgcgccttca cgaacccgac gacgaactcg taccgccggc tggtgccggg
      721 ctacgaggcg cccgtgttca tcgcctggtc caaacgcaac cggagcgcga acatccggat
      781 tccgatgtac taccagggca tcgaggcggc gaagcgcatc gagtatcgga cgccggaccc
      841 ggcgtgcaac ccgtacctgt ccttcgccgc gatgctgtgc gccggcctcg acggcgtcaa
      901 gaggaagatc gatcccggca acccggtcga cgaggacctg taccatctca gcgcgagcaa
      961 gcgcaaggaa tacggcgtcc gagagctgcc gggatccctg aaggagtcca tcgagcacct
     1021 gcagaccgac tacatgttcc tcaagacggt cttcccgcag gacctcctcg agaagtacga
     1081 ggagctgaag ctcgacgaac acctgcagac ctcgctgcgg ccctcgccgt acgagttcta
     1141 ccggtacatg gacgcctgag ccaggcgggc ctcgagtccc tcacacctcc gcggacgacc
     1201 gcggtcgtcc gatggcgaaa gggcggagtc gagatccgac gcgcgcgagt acggtcggta
     1261 cgtgtccagc cctcaaatac cgccggcgga actggactcg cgaggcgaca tcgatggcat
     1321 ccgttcaggt cttcctcgac aactggttca tgcggcactt gggatccctg aagaccacga
     1381 tgcgagtgat cttcggcgtc gtctggataa tcgatggagc attcaagttc caaccgggct
     1441 tcgccgactc attggcccag atggtctcgg acgcgggcca aggccagccg agctggttgc
     1501 agccgtggtt cggcttctgg agccaaaccg tgagcgggag ccccggcttt ttcgtgacga
     1561 cgatcggcgc gctcgagttg gcgctgggct tcgccctcct cctcggcttc atgcggaagg
     1621 tggcgtacac ggcgggcatc ttcctcagtc tcatcatctg gtcagtacct gaggggttcg
     1681 gaggtcccta tggcccgagt tccacggaca tcgggaccgg gatcatctac gccttcgtat
     1741 tcctcctcct catgatcatc aacgccgcgt tcggcccgag ccgatggtct ctcgactacg
     1801 ccatcgagag gcggtggcct gcatggaaga aggtctcgga gattcggagc gtcgcttgat
     1861 caaggggcga ccatcgcacg cgaaagggag gcgcgaggcg ctggtttaag acgaacggtg
     1921 gctgtctcgc tcggcaccat ggcggagctc aaagacgaca tcacagagga gcgtcgcatc
     1981 ctcaaggagg cggggatcct cgatgagaag ctcctcgaga agatggacat cttcccgggg
     2041 gaccgcgtgc gtttccgctt ctactatccc cactccggct ttgaggagat gatcggtcac
     2101 ttcctcggct tctacacgct atacgagggc cccgagggcg ggggcgactt gaacctggtc
     2161 atccggactg tgaaggacgg ccgcacgacg gtcgtctaca aggaccggaa ctacctcgag
     2221 gagtacgaga tcctcgaacc gaatccgaag gtccgggaca agattcgcga cttggacgcc
     2281 cgccacggtc ggcacgtcgg gcacgagttc gggtgagcgc tcagtacttg tcgacgcctt
     2341 gggcgagagc cttcaggcgc gcgatccgct cttggatggg cgggtgcgtg ctgaacatcc
     2401 gcacgaacgc tcccgcggcg aacgggttca cgatgaacag gctctgggaa gcgggactgc
     2461 cgaaagtaaa cggtctccgc ttgttcgcca cttcgagttt ctcgagcgcc gaggcgaggg
     2521 cgagcggctg tccaatcgtc ttcgcgccgc tgtagtcggc cttatactcc ctactgcggg
     2581 agattgcaag ttgcacaagg atggccgcaa tgggagcgag gatcatcccg acgagcgcca
     2641 ggatgagcgt gcccgcgttc ccgttccgat cccgggagcc gcctccgaac agcatgttcc
     2701 aaccgaacat ccgggccatg aacgaaatcg cgcccgcgag ggtcgcggcc acggacatga
     2761 ccaggatgtc ccggttccgg acgtgggaga tttcgtgggc caggacgccc cgaagctcgt
     2821 cttccgtcag caatgtcagg atcccctggg tcacggcgac gaccgcatgc tgcggattcc
     2881 ggccagtcgc catcgcattc ggc
//
LOCUS       DATLMA010000380         1797 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_880516, whole genome shotgun sequence.
ACCESSION   DATLMA010000380 DATLMA010000000
VERSION     DATLMA010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880516"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1372
                     /locus_tag="VNA10_04890"
     CDS             <1..1372
                     /locus_tag="VNA10_04890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37047.1"
                     /translation="GYLWIEPMLRLLAIPATVYSIGRRLFGPRTAVIGVALYLGTPSI
                     LFNLPIQQGFGTIFFGLSLLSLFMLTQAVDVRAQVRAAALFAVVSAAIVLTHHLSSYV
                     AAFWLAALGVLILRRRARTTLPVLLLAVLFAYFVVLLLLYIDALTKPVFLGHELTLQT
                     VLTSLIGPEGAPANPSGSNLGRTFMPLEIGWLAGSLIALFLLSLLSVWHYRVTRHHPF
                     AVANGIVAAFLIFITLPLLFTPLNYVPLRINEFTGFIIMPFAAATLIRWARSDFWKSV
                     RRAPRIFREREWLPKAVVLATSAAVVMGGNLAPLTMRAYFEPFLQRTTDSPLYLDVDS
                     LRAADWAGAHFANGHIWGDQLAVDVFAGFGDLPVKFGSARMFNGTALDNSTLKSWKAV
                     GMKVGDYVAVNRWMTILRPNFFQEGLRTTPADPAELDKFATDPHFALVYQDATFSVYQ
                     VMSLPP"
     gene            complement(1387..>1797)
                     /locus_tag="VNA10_04895"
     CDS             complement(1387..>1797)
                     /locus_tag="VNA10_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37048.1"
                     /translation="LALVHFPDSLSPGIAIYGWDGTSGSLNQTFLQGQPQEIIVSALG
                     GSTAGAFVVRIRLIPQNATGNESFHTVVLTTPPLRLDAFAEYNVSLVLGAGQSWTRTF
                     SISVEQPGAFNLSFALLDSSSSLVATNRLPVVVT"
BASE COUNT          287 a          571 c          540 g          399 t
ORIGIN      
        1 cgggtacctg tggatcgagc cgatgcttcg gctcctcgcg attcccgcca ccgtgtattc
       61 catcggtcga cgactcttcg gtcctcggac cgcggtaatc ggtgtggcct tgtatctcgg
      121 gaccccgtcg atcctgttca acctcccgat ccaacagggt ttcggcacga tcttcttcgg
      181 cctgtcgctg ctctcgttgt tcatgctgac ccaggcggtg gacgtccgcg cgcaagttcg
      241 cgctgccgcg ctgttcgccg tcgtgagcgc cgcgatcgtt ctgactcatc acctgtcttc
      301 gtacgtggcc gcattctggc tcgcggccct cggggtgctc atcctgcgcc gccgagcccg
      361 gacgacgttg cccgtcttgc tgttggccgt cctgttcgcc tactttgtcg tcctgctgct
      421 gctatacatc gacgccctga cgaagccggt cttcctcggt cacgagctta ccctgcagac
      481 cgtcttgacg agtttgatcg ggcccgaagg cgcaccggcc aacccctccg gctcgaattt
      541 gggtcggacc ttcatgccat tggagatcgg atggctcgcc ggctccctga tcgcgctatt
      601 cttgctgtct ttgctgtccg tctggcacta tcgcgtcact cggcaccacc cgttcgccgt
      661 cgcgaacggg attgtcgcgg ccttcctgat cttcatcacc ctgcccctgc tcttcactcc
      721 gctgaactac gtcccgctcc gcatcaatga gttcacgggc ttcatcatca tgccgttcgc
      781 ggccgcgacc ctcatccggt gggctcgatc cgatttctgg aagtccgttc gtcgggcgcc
      841 tcgcatcttt cgcgagaggg agtggctccc gaaggccgtg gtgctggcca cttccgcggc
      901 cgtcgtcatg ggcggcaatt tggccccgct cacgatgcgg gcgtacttcg agcccttcct
      961 ccagaggacg accgattcgc cgctatacct cgacgtggac tccctccgag cggcggattg
     1021 ggcgggagct catttcgcca acggccacat ttggggcgat cagttggccg tggacgtctt
     1081 cgcgggattc ggagacctgc ccgtcaaatt cggaagcgct cgcatgttca atggaacggc
     1141 tctcgataac tcgacgttga aaagttggaa ggcggttggt atgaaagttg gcgactatgt
     1201 cgcggtgaat cggtggatga cgattttgcg tcctaacttc ttccaggaag ggctacgaac
     1261 caccccggcg gacccggcgg agctcgacaa attcgcgacc gatccccatt tcgctctggt
     1321 gtaccaggac gcgacgttct cggtctatca ggtcatgtcc ctccctccgt gaacgggacg
     1381 ccgggatcac gtcacgacga ccggcaagcg gttggtcgcc acgagggagg aggacgaatc
     1441 gagcagggcg aaggacaggt tgaacgcgcc gggttgctca acggagattg aaaacgtccg
     1501 ggtccagctt tggccggcgc cgagtacgag cgacacgttg tattccgcga aggcgtccag
     1561 cctcaagggg ggggtcgtta ggaccacggt gtggaatgat tcgtttcccg ttgcattttg
     1621 agggatcagg cgaatccgaa ccacgaaggc gcccgccgtc gaaccgccca atgcggagac
     1681 gataatttcc tgtggctggc cctggagaaa cgtctggtta aggcttccac tggtcccgtc
     1741 ccaaccgtag attgcgattc ctggagagag gctgtccgga aagtgcacca acgcgag
//
LOCUS       DATLMA010000381         1039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_96200, whole genome shotgun sequence.
ACCESSION   DATLMA010000381 DATLMA010000000
VERSION     DATLMA010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96200"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1039)
                     /locus_tag="VNA10_04900"
     CDS             complement(<1..>1039)
                     /locus_tag="VNA10_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37049.1"
                     /translation="LAKKTEELEGRDRSLRAASAQLEVERSKLDAEAKTQSAKSAEAD
                     AAWRRSEARLAELKAKEDELLRARQSFESDRSTWSARRTEELKQLEATRDAAAQQAQQ
                     AERLVAESQRRALVAEEAERAEKRQSADLAAQEARLEGRRAEAEKAERDAQGHLAQLQ
                     EASRKLAVKDMEIATAVKDLETRQSKLAAAERDSAAIQAVLRSQKTTLDQEAARITAS
                     SDQLTMRQRDLESRTASLETKVAQASTKEQALATELQRADNLMEDLTKKDHDLRAREE
                     TTKTSEKTLAAREATLVARDAEVREGMRGLEKLRKEIEGQRGATEEDRQTAKTTREEA
                     EATKREADKIRA"
BASE COUNT          107 a          355 c          327 g          250 t
ORIGIN      
        1 gcccggatct tgtccgcctc gcgcttcgtt gcttccgctt cctctcgggt ggtcttcgcc
       61 gtttgacggt cttcctcggt ggcgccgcgc tggccctcga tttccttgcg gagcttttcg
      121 aggccccgca tcccttcccg gacctcggca tcgcgtgcga cgagggtcgc ctcgcgtgcc
      181 gccaaggtct tctcggaagt cttcgtggtc tcttcgcggg cgcgaaggtc gtggtccttc
      241 ttggtgaggt cctccatgag gttgtcggcg cgttggagtt ccgtcgcgag ggcctgctcc
      301 ttcgtggagg cctgggccac cttggtctcg agggaggccg tccgcgactc cagatccctc
      361 tggcgcatcg tcagttggtc cgacgacgcg gtgattcgcg cggcctcttg gtccaaggtc
      421 gttttttggg agcgcaacac agcttggatc gccgcggaat ccctctccgc ggccgcaagc
      481 ttcgactgcc gcgtctcgag atccttgacg gccgtagcga tttccatgtc tttcacggcc
      541 aatttccgcg aggcctcctg caactgtgct aggtgaccct gcgcatcgcg ctccgccttc
      601 tcggcttcgg cccggcgacc ctccaagcgc gcctcttgag cagcgaggtc ggcactctgg
      661 cgtttttccg cgcgttccgc ttcttctgcg acgagggccc tgcgctggga ctcggcgacg
      721 agccgctccg cctgctgggc ttgttgcgcg gccgcatcgc gcgtcgcctc gagttgcttc
      781 agctcctcgg ttcgtcgggc ggaccaggtg gagcggtcgg attcgaacga ctggcgggca
      841 cggagcaact cgtcttcctt cgccttgagc tccgcgagac gggcttccga tcgtcgccag
      901 gccgcatccg cctctgcgct tttggcggat tgggttttcg cttcagcatc gagtttggat
      961 cgttcgacct ccaactgggc cgaagccgcg cgcaggctgc gatctcgtcc ctcgagttct
     1021 tccgtcttct tcgcgagct
//
LOCUS       DATLMA010000382         1321 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_700796, whole genome shotgun sequence.
ACCESSION   DATLMA010000382 DATLMA010000000
VERSION     DATLMA010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_700796"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..1113
                     /locus_tag="VNA10_04905"
     CDS             154..1113
                     /locus_tag="VNA10_04905"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HVG37050.1"
                     /translation="MMETEYGPGRTIPHPVMFRVLDSEADDLTVPEIKVEHKSEYAYY
                     PGCVDYYDVEMQFSHMNYGDTNHGIIFDSSVKLLRAVGIQPMILDRSFMKCCGHDQLW
                     QGKVDVFERMREYNTKIIKMLGVKTFITSCAEGYRTFKLDYKLDGVRVVHITQFLYER
                     GLRIPPQPDTAKKIRVAFQDPCRSGRQMPLDPVYEEPRELVKRVDNAELVELKTFRAD
                     AQCCGVAQMMYCNDKTKGLTAKRMDEATDVDADYLLVACPKCLTHFGCLHHENKWKPG
                     EERYGFKVMDITQFLAERLPGDWPTGSNVDQKRKEPPLPGRRG"
     gene            1117..>1321
                     /locus_tag="VNA10_04910"
     CDS             1117..>1321
                     /locus_tag="VNA10_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37051.1"
                     /translation="MATSPAVAAKPAAAPVPQAPADPLTGYYRAVRQMNLQLAKDRYK
                     QGFKVRTQEYIRGRGTLAIVDEEI"
BASE COUNT          277 a          426 c          420 g          198 t
ORIGIN      
        1 caagaagcaa cacgacggcg tgccgctctg gacgtgcctc gcgtgcgacg cgtgcagcgc
       61 cgtatgcccg ttggacatcc agtacagcga ctacatcctc gaggaacggt cgaaggtcca
      121 tgcacggatg gcggcggacg ggggttcccg caaatgatgg agaccgagta cggaccgggc
      181 cgcacgatcc cccacccggt catgttccgc gtgctcgaca gcgaagcgga cgacttgacc
      241 gtccccgaga tcaaggtcga gcacaagtcc gagtacgcgt actacccggg ctgcgtcgac
      301 tattacgacg tcgagatgca gttctcgcac atgaactacg gcgacaccaa tcacggcatc
      361 atcttcgatt cgtcggtcaa gctcctccgc gccgtcggca tccagccgat gatcctggac
      421 cgctcgttca tgaagtgctg cggccacgac cagctctggc aaggcaaggt cgacgtcttc
      481 gagcggatgc gggagtacaa cacgaagatc atcaagatgc tcggcgtgaa gacgttcatc
      541 acgtcgtgcg cggaaggcta ccggaccttc aagctcgact acaagctgga cggcgtccgg
      601 gtcgtgcaca tcacccagtt cctctacgaa cggggcctgc ggatcccgcc acagccggac
      661 acggccaaga agatccgcgt ggcgttccag gacccgtgcc gctccggtcg acagatgccg
      721 ctcgatcccg tgtacgagga gccgagggag ctcgtgaagc gcgtcgacaa cgcggagctc
      781 gtcgagctga agacgttccg cgcggacgcg cagtgctgcg gcgtcgccca gatgatgtat
      841 tgcaacgaca agacgaaggg cctcacggcg aagcggatgg atgaggcgac ggacgtcgac
      901 gcggactacc tcctggtcgc atgcccgaag tgtctcaccc atttcgggtg cctccatcac
      961 gagaacaagt ggaagccggg cgaggagcga tacggattca aggtgatgga catcacgcag
     1021 ttcctcgcag aacgtctccc cggcgattgg ccgaccggga gcaacgtcga ccagaagcgg
     1081 aaggagccgc ccctccccgg ccggaggggg tgacggatgg ccacctctcc ggcggtcgcc
     1141 gcgaagcccg cagccgcacc cgttccgcaa gcgcccgccg acccgctgac tggttactac
     1201 cgcgcggtcc gccagatgaa cctccagctg gcgaaggacc gatacaaaca gggattcaag
     1261 gtccggacgc aggagtacat ccggggacgc ggcacgctcg cgatcgtcga cgaggaaatc
     1321 t
//
LOCUS       DATLMA010000383         2129 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_764581, whole genome shotgun sequence.
ACCESSION   DATLMA010000383 DATLMA010000000
VERSION     DATLMA010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_764581"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1386)
                     /locus_tag="VNA10_04915"
     CDS             complement(<1..1386)
                     /locus_tag="VNA10_04915"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HVG37052.1"
                     /translation="MARKVTFTPRRFLKRIWQLGNFDVAHDGRLLAFAANKGDQWSVY
                     ILDLRTKKDRILLQSEQSVLNPEFSPDGRWIAVQPDFEGDENYNIYLVPVRGEHVQKI
                     TDTPFDSALPRWSPDGTKIAFLSNRDGDRDNVFVVDTTGGDAKQLTNLDDIVGEIAWR
                     PDGRSIAFSAGVGLLDYVGLVDLAGHLEKVVAFPDSENAIGGDLGRPEPWSPNGRELA
                     FVSNVHDHLDLGVLDVKTKRVRFIVTNRWDKTMPLWAPDGKRIAFLENHDGNVQLKVV
                     SRDGKGSRAISPASGSANRALWAPDAKGLFYHHSTFTQPDRLILRKGERSTTLLDSLR
                     EPLPKEELADGKLVRYPSVDGRKIAAWLFVPRKERRRNAAVVDPHGGPESQTLNEWDP
                     RFQFLAAQGFTILAPNYRGGTGSGRAWRRLSDRDLGGGDIQDIIAGGRWLIQRGHVPA
                     DRLGAIGVSYGG"
     gene            1455..1940
                     /locus_tag="VNA10_04920"
     CDS             1455..1940
                     /locus_tag="VNA10_04920"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HVG37053.1"
                     /translation="MALNVATLPITVGAGAFLVRDGKLLVVRKTYGPSKGLWTIPSGY
                     VEPRESVVQTIEREVKEETGIAGRAGPILAVRNRVTEAANDTFLIFAMTYVGGEPRPD
                     REEVSEAAFRPLGELKTSDSSAPFTRAIIPKLDRRAGLQLDPYTPSAEPAHPIAYLLY
                     L"
BASE COUNT          350 a          692 c          697 g          390 t
ORIGIN      
        1 cccgccgtag ctcacgccga tggctccgag tcggtcggcg gggacgtgac ctcgctgaat
       61 cagccatcgg ccgcccgcga tgatgtcctg gatgtccccg cctcccaggt cgcggtcgct
      121 caggcggcgc caggcgcgtc cgctcccggt cccgccgcgg tagttcggcg cgagaatcgt
      181 gaagccctgc gcggccaaga actggaaccg cgggtcccat tcgttcaggg tctgcgactc
      241 cgggcctccg tgggggtcga cgacggccgc gttgcggcgg cgttccttcc gaggcacaaa
      301 gagccaagcg gcgatctttc ggccatcgac gctcgggtac cggacgagct ttccgtcggc
      361 gagctcctcc ttcggaagcg gctctcgaag gctgtcgagc aaggtggtgg accgctctcc
      421 ctttcggagg atgagccggt ccggctgcgt gaacgtggaa tggtggtaga acaggccctt
      481 ggcatccggg gcccacaagg cccggttcgc cgaaccgctc gccggagaga tcgcccgcga
      541 ccccttgccg tcgcgggaga cgaccttcag ctggacgttc ccgtcgtggt tctcgaggaa
      601 cgcgatccgc tttccgtccg gcgcccagag gggcatcgtc ttgtcccagc gattcgtgac
      661 gatgaagcgg acgcgcttcg tcttgacatc gagcaccccg aggtccaggt gatcgtgcac
      721 gttcgatacg aacgccagct cccgaccgtt cggggaccag ggttcgggtc ggccgaggtc
      781 gcctccaatc gcattctccg agtccgggaa ggcgacgact ttctctagat ggccggcgag
      841 gtccacgagc ccgacgtaat caaggagtcc gacgcccgcc gagaacgcga tgctccggcc
      901 gtcgggacgc cacgcaatct cgccgacgat gtcatcgagg ttcgtgagct gcttcgcatc
      961 gccgccggtc gtgtccacca cgaagacgtt gtcgcggtcg ccgtctcggt tcgatagaaa
     1021 tgcaatcttg gtgccgtcgg gggaccaccg aggcaaggcg ctgtcgaacg gcgtatccgt
     1081 gattttctgg acgtgctcgc cgcgcacggg cacgaggtag atgttgtagt tctcgtcccc
     1141 ctcgaagtcc ggctgcaccg cgatccaccg gccatccgga gagaactccg gattcaggac
     1201 ggactgctcg gactgcagga ggattcgatc ctttttcgtc cgaaggtcca ggatgtagac
     1261 ggaccactgg tctcctttgt tcgccgcgaa cgcgagcaac cggccgtcgt gggccacgtc
     1321 gaagttcccg agctgccaga ttctcttcag gaagcgccgc ggggtgaacg tgaccttccg
     1381 tgccatggcg caccggtcgt ccgaggaacg agacctggga taaagccatc tcgttcggag
     1441 acctgaccgg ggccatggcc ctcaacgttg cgacgctccc gattacggtc ggtgcgggcg
     1501 cgttcctggt ccgcgacggg aagctgcttg tggtccgaaa gacgtacggc ccgtcgaaag
     1561 gcctttggac aatcccgtcg ggatacgtcg agccacgcga gtccgttgtc cagaccattg
     1621 aacgcgaagt gaaggaggaa acgggcatcg cgggccgtgc cgggccgatc ctcgccgtcc
     1681 gaaatcgcgt gaccgaggcg gcgaacgata cgttcctcat cttcgccatg acgtacgtgg
     1741 gcggagagcc gcgacccgat cgcgaggaag tgagcgaggc ggcgttccgt cctcttggcg
     1801 aattgaagac ctccgactca tcggccccat tcacgcgggc gatcattccc aagctcgacc
     1861 ggcgtgccgg cttgcagttg gatccgtaca cgccttccgc ggagccggcg cacccgatcg
     1921 catacctctt gtacctctga aggcggaaaa cctttagtcg gcctgtcctt ttgcagcggc
     1981 gtggtcgaga cgatcctcgc gcagtccttg ggcacgaagt atgtcctcga cgccgcggcg
     2041 ttgggccgga ttcgcgacat cctgagggtc ggcggcttgg tcgttcatcc gaccgacacg
     2101 gtgtacggcc tcgcagcgga tccattcca
//
LOCUS       DATLMA010000384         2918 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_96461, whole genome shotgun sequence.
ACCESSION   DATLMA010000384 DATLMA010000000
VERSION     DATLMA010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96461"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(598..1362)
                     /locus_tag="VNA10_04925"
     CDS             complement(598..1362)
                     /locus_tag="VNA10_04925"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HVG37054.1"
                     /translation="MNRFETHVVLITGGSSGIGFATARAFLEEGAKVAVTGRNAARLG
                     RAVRRLGSRGRILGIRGDVSKAADARRFIVRTEKTFGPLDVLVNNAGIYVEGSTEDLT
                     EREWDSVLDINLKGAFLCTKYALPGMIRRKRGNIVNVASDSGLVATPLSSAYCASKGG
                     MVLFTRVLAVDHAKDGIRANAICPGNVETPMLDRDAQASGLGREEYHRRLVASVPQKR
                     AAKPEEIARAILFLASDEVPFMTGAAMSVDGGWTSL"
     gene            1450..2403
                     /locus_tag="VNA10_04930"
     CDS             1450..2403
                     /locus_tag="VNA10_04930"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HVG37055.1"
                     /translation="MTGTKRARFRGYALVLFGAVLFGVAASLSKLLLNMGLAPVELSF
                     YTQLIAGLLFLPSVRRRMFVRRDWWILLFLGSVGGAVAPILFYVGIARTTAANAAMLQ
                     NGEPLFTIGFAYLLLGERVRRRGYAMIAAIAAGAFVVATNLEFSDAAFAPFLAGNLLL
                     IGASAFWGLDNTASAVITRRVSIPAVLGVRLLLGCVFLTPVIVATNTSLAVPAGAIPL
                     LVGYSVLTIVVYATVLYYAFRTIGPLRSGAILSTSALWGVLFAVLLFPNQLPSGTQLG
                     GGAVMVLALIGLYWLGEPHSAEGPLTPEALNVSARDGPRSP"
     gene            2532..>2918
                     /locus_tag="VNA10_04935"
     CDS             2532..>2918
                     /locus_tag="VNA10_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014808531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HVG37056.1"
                     /translation="MTKNQKVSPLKPGNKAPNFTLKTTPDQHVSLRDFLGRPVVLCFY
                     PADWSPVCSDQLGLYAQLMPEFRKFDAELLGVSVDGVWSHLAFSKDRNLNFPLLSDFD
                     PKGAISRIYGAFSERNGESARALFVID"
BASE COUNT          493 a          980 c          855 g          590 t
ORIGIN      
        1 agctcgcctt tgatgaagcc ggcgagggtg ccgccgaggg ctcccccgcc gtggctacca
       61 aggtcgatgc cgatcagtct cgtcgtcgtg aagtacagcc catatcccac gcggaatcct
      121 ttttccagga agccgcccgc gaatcctcca ataaacgtct ctcccatgct tgtgtccagt
      181 cggctccact cgggagtcgg cagtgacgca cggatacgtt cgggcttata gcttgtcctt
      241 cacgaactcg aaccctttcg cgagcggggc ccgaacgctc gcgcatcgta acggaatccg
      301 cgttcggccg acttttgggg cgccgatcgt ccacgcctcg gtccatggct ttcgacgatc
      361 ggaaaccgag agtcgttgaa tctagcgtta gtcggcaccc cgccgggagc atgctacttt
      421 cttggcgcgc ctctccgtcc agaaggtggt actgaggatc ttcgccgggg cctcgagcca
      481 atcccggaga gcctcgacgc cgacttcctc ggctcgcggg ccgggctccc cgcggaagag
      541 atgccggtcc gcgtaagagc gtcctcgtcg ccgaagccgc attcgcctcg acacatttca
      601 gagggatgtc cacccaccgt cgacggacat tgccgctccg gtcatgaagg gtacctcgtc
      661 actcgccagg aaaaggatcg ccctcgcaat ctcttccggt tttgcggccc gtttctgcgg
      721 aacggacgcg acgaggcgcc ggtggtattc ttcgcggccg agcccggacg cctgtgcgtc
      781 tcgatcgagc atcggggtct ccacgttacc ggggcagatc gcattcgcgc gaatcccgtc
      841 tttcgcgtgg tcgaccgcaa ggacgcgggt gaagaggacc atcccgccct tcgaggcaca
      901 gtaggcggac gacaggggcg tcgcgacaag gccggagtca gacgccacgt tcacgatgtt
      961 ccctcgcttc cgccggatca tcccaggaag agcatacttc gtgcaaagaa acgcaccctt
     1021 caggttgatg tcgaggaccg aatcccactc ccgctcagtc aggtcttccg tcgacccctc
     1081 cacgtagatc cccgcgttat tcacgagcac gtcgagcggg ccgaacgtct tctccgttcg
     1141 tacgatgaaa cgcctcgcat ccgcggcctt tgaaacgtct ccccggatcc cgaggatccg
     1201 gcctcgcgaa cccagccggc gaacggctcg accgagcctt gcggcgttcc ggcccgtgac
     1261 ggcgaccttc gcgccctcct cgaggaaagc ccgcgcggtc gcaaatccga ttccggacga
     1321 accgccggtg atgagcacga catgcgtttc gaatcggttc attgcccgga taacgagtct
     1381 accggtttat ccttcctccg ggcgcggaat ctccgaatcc gttttcccgc ggttcgcgtt
     1441 ccacgtcgcg tgaccgggac gaagcgcgcg cggtttcgag ggtatgccct cgtcctcttc
     1501 ggcgccgtgc tcttcggcgt cgcggcgtcc ctcagcaagc tcttgctcaa catgggcctc
     1561 gcccccgtcg aattgagttt ctacactcag ctcatcgccg gcctactgtt cctcccatcc
     1621 gtccgacggc gcatgttcgt ccggagagat tggtggatcc tcctgttcct cgggagcgtc
     1681 ggaggcgccg tcgcaccgat ccttttctac gtggggatcg ctcgtacgac cgctgcgaac
     1741 gcggcgatgc tccagaacgg ggagccgctt ttcacgatcg ggttcgccta tctcctcctc
     1801 ggggagcggg tccgccgtcg cggctacgcc atgattgccg ccatcgccgc gggcgccttc
     1861 gtcgtcgcga cgaacctgga attctcggac gccgccttcg caccattcct cgcgggaaac
     1921 ctcttgctga tcggcgcatc cgccttctgg ggactcgaca acaccgcgag cgccgtcatc
     1981 acgcggaggg tcagcatccc tgcggtgctc ggcgtccggt tgctgctcgg ttgtgtcttc
     2041 ctgacgccag tgatcgtggc cacgaacacg tctcttgccg tcccggcggg cgcgatcccg
     2101 ctcctcgtcg gatactcggt cctgacgatc gtcgtctacg cgaccgtgct ctactatgcc
     2161 ttccgaacga ttggccctct tcgatccgga gcaatcctct ccacgtcggc tttgtggggc
     2221 gtcctgttcg ccgtcctcct gttcccaaac caactcccaa gcgggacaca actggggggc
     2281 ggcgcggtga tggtcctcgc cctcatcggg ttgtactggc tcggggagcc gcattcggcg
     2341 gaggggccgc tgacacccga ggcattgaat gtttccgcgc gggatggtcc gcgatctccg
     2401 tgacgcggag gaaacgaagg gttcgaccaa aaccctatac gtcgccgaag ccgtaacgag
     2461 gcgagccaat gagacgctta cactcacttc gtgaccggcg atgaaggtca aatggtacga
     2521 tgaaagaatc cgtgacgaaa aaccaaaaag tctcgccgtt gaagcccggc aacaaggcgc
     2581 cgaacttcac cctgaagacg acgccggatc agcatgtctc gctccgggat tttctcggta
     2641 ggccggtggt gctttgtttc tatcctgcgg actggagccc cgtctgcagc gaccaactgg
     2701 gactctatgc gcagctgatg cccgaattca ggaagttcga cgctgaactt ctcggagtct
     2761 ccgtggacgg agtctggagt catctggcgt tttcaaaaga tcgcaacttg aacttccccc
     2821 ttctctccga cttcgacccc aagggggcca tctcccgaat ctacggagcc ttctccgaac
     2881 ggaacggcga atcggcccgg gcgctgttcg tgatcgat
//
LOCUS       DATLMA010000385         1252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_519066, whole genome shotgun sequence.
ACCESSION   DATLMA010000385 DATLMA010000000
VERSION     DATLMA010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_519066"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1252
                     /locus_tag="VNA10_04940"
     CDS             <1..>1252
                     /locus_tag="VNA10_04940"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HVG37057.1"
                     /translation="LQTALSFIPEEMGVALRRTAYSPNIKERMDASCALFDAEGRIVA
                     QAEHIPVHLGSMPVAVDAAMRDFPGTLREGDQIILNDPYRGGTHLPDVTLIRPVFVRQ
                     GITGFAVNRAHHADIGGKVAGSMPATAMRLEDEGLVLEPQKFMDRGTERQAVVERFRR
                     ETLNPAERLGDLRAQIAANELGARRLVELAERIGVTSLQTSIEELLDYGERRVRASIG
                     ELPRGTWAAEDFMEGASPDEPNRIRIHAEITIGGSGIAVDFEGTDRQVAGNLNAPFAV
                     TLSAASYVMRCLTDPDAPRNAGALRPLRVLAKEGSLVRPRPPAAVAAGNVETSQRIVD
                     VLFLALSEPLAETVPAQSQGTMNNLTIGGRDPRLFSYYETIAGGEGALPYRSGMAGVH
                     THMTNTRNTPVEALEFAYPLRIEEY"
BASE COUNT          229 a          405 c          422 g          196 t
ORIGIN      
        1 ctgcagaccg cgttgtcgtt catccccgag gagatgggtg tcgcgcttcg ccgcaccgcg
       61 tactccccga acatcaagga acgaatggac gcgagctgtg cgctcttcga cgcagaggga
      121 cgcatcgtgg cccaggcgga gcatatcccg gtccacctcg gttcgatgcc cgtcgcggtc
      181 gacgccgcga tgcgagattt cccgggaacc ctccgagagg gagaccagat cattctgaac
      241 gatccctatc ggggcggcac gcatctgccc gatgtcacgc tcatccgacc ggtgttcgtg
      301 cgccagggga tcaccggatt cgcggtgaac cgagcgcacc atgccgatat cggcggaaag
      361 gtggcgggct cgatgccagc gacggcgatg cgcctcgaag acgagggcct agtcctggag
      421 ccgcagaagt tcatggaccg cggaaccgag cgacaggcgg tcgtcgagcg attccgtcgg
      481 gagaccttga atcccgcgga gagactgggc gacctccggg cacagatcgc ggcgaatgaa
      541 ctgggagctc ggcgcctcgt cgaactcgca gaacggatcg gggtcacgag tcttcagacc
      601 tcgatcgagg agctcctcga ctacggggag cggcgggtgc gcgcgtcgat tggcgagctg
      661 cctcgcggga cctgggctgc cgaggacttc atggagggcg cctcgccgga cgagcccaat
      721 cggatccgga tccatgcgga gatcacgatt ggcggatccg gcatcgcggt ggacttcgag
      781 gggaccgatc gccaggtcgc cgggaatctg aatgctccat tcgccgtgac gctgagcgcc
      841 gcatcgtacg tgatgcgatg cctgacggat ccggacgcgc cgcgaaatgc gggagcgctc
      901 cgcccgctgc gggtcttggc gaaagaaggg agcctcgtgc ggcctcgccc tcccgccgct
      961 gtggccgcgg ggaacgtcga gacctcgcag cgaatcgtgg acgtcctgtt cctcgcgctc
     1021 tcggaaccgc tcgccgaaac cgtccccgct caaagccaag gcacgatgaa caacctgacg
     1081 atcggaggac gcgatcctcg gctgttctcg tactacgaga cgatcgcggg tggcgaaggc
     1141 gccctgccgt accgctctgg gatggcgggc gtccatacgc acatgacgaa cactcgcaac
     1201 acgccggtcg aagccctcga gttcgcgtac ccgctccgca tcgaagaata cc
//
LOCUS       DATLMA010000386         1516 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_701494, whole genome shotgun sequence.
ACCESSION   DATLMA010000386 DATLMA010000000
VERSION     DATLMA010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701494"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="VNA10_04945"
     CDS             complement(<1..302)
                     /locus_tag="VNA10_04945"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HVG37058.1"
                     /translation="MAEFLARQRWTLILTARHEGPLLEAVKRLQATGASITAVPGDVT
                     QELHRHDLLAAVRRIGRLDLLMNNASELGESPFPALVEYPLEALRRVHEVNVVAPLA"
     gene            519..1280
                     /locus_tag="VNA10_04950"
     CDS             519..1280
                     /locus_tag="VNA10_04950"
                     /inference="COORDINATES: protein motif:HMM:NF020296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HVG37059.1"
                     /translation="MALDVKAANDRMVGQLRSAPKVASPADLQSYVGSPVPVLGLSVP
                     TMRAIIAAFAKDHARLTATELNALAAALWSGQLFEEKSLAIFFLERYEKILDDDSWKL
                     VDGWVDVATGWALSDALASGPIAGMVYAKPVRFRDLLRWTRAKNVWRRRASTYGLHRF
                     VRAGELDKPFRLLERLLYDEEFWVQRAVGTWLRECWKKDRRRTEGFLRHHVAGLPPVT
                     ITVATERAPKAFRLELRQKARAAAPEARRDRRPKS"
     gene            1364..>1516
                     /locus_tag="VNA10_04955"
     CDS             1364..>1516
                     /locus_tag="VNA10_04955"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HVG37060.1"
                     /translation="MAEEHVIQEKALRRFCEQVLAKLGVPAEDARVTTDVLVLADLRG
                     IDSHGVA"
BASE COUNT          274 a          460 c          494 g          288 t
ORIGIN      
        1 gcgagcgggg ccacgacgtt gacctcgtgg acgcgtcgaa gggcctcgag cgggtattcc
       61 acgagtgccg ggaacgggga ttcacccagt tcggaggcgt tgttcatcaa gaggtcgagg
      121 cgaccaatcc gtcggaccgc ggcgaggagg tcgtgccggt gtagctcctg cgtcacatcg
      181 ccggggacgg cggtgatgga cgcgccggta gcctggaggc gtttcacggc ctcgagcagc
      241 ggaccctcgt gacgggccgt caggatgagg gtccaccgct gccgtgcgag aaactcggcc
      301 acggtgtatc cgagaccgcg gctcgcccca gtgattaaag cgacgcgttc ggtcggaggt
      361 tgagaggcaa gcgtcgaact cttcgccatg cccgtccaag accgtccgcg atttatctcg
      421 gttctcgttt acaaaatgga taaaccgctc acgcctgccc ggaggggatt cgcatttccg
      481 ctgtcctctt tattgcccgt cgcggtttct gcgaatcgat ggcgctggat gtcaaggccg
      541 cgaacgaccg gatggtcggg caactccgaa gtgcgccaaa ggtggcgtct cccgcagatc
      601 tccaatccta cgtcggttct ccggttccgg tccttggctt gagcgtgccg acgatgcgtg
      661 ccatcattgc ggccttcgcg aaggatcacg cgcggttgac agccacggaa ctaaatgcgc
      721 tcgccgccgc tctctggtct ggacagctct tcgaagagaa gtcgctggcg attttcttcc
      781 tggaacggta cgaaaaaatc ctcgacgatg actcgtggaa gctcgtggac ggatgggtcg
      841 acgtcgcgac cggatgggcc ctgagtgacg cgctcgcctc cggcccgatc gccggaatgg
      901 tgtatgcaaa gcccgtccgg tttcgagacc tccttcgatg gactcgcgcg aagaacgtct
      961 ggcggcgacg tgcatcgacg tatggtctcc atcgatttgt ccgggcgggc gaactcgaca
     1021 agccgttccg actcctggag cgactgctgt acgatgagga gttctgggtg caacgggccg
     1081 tcggcacctg gctgcgcgaa tgctggaaga aagatcgccg acggacggag ggttttctgc
     1141 gacaccacgt ggcgggtctg ccccctgtga ccatcacggt ggccaccgag cgggctccga
     1201 aggcattccg ccttgagtta cggcagaaag caagagccgc cgcccccgag gcaagacgcg
     1261 accgtcgccc caagtcgtga tcgagatttg tgcggcgccc cgtgtcgtcc gcaaatttat
     1321 acacaaagcc ttagttcgtg gtcgtacaag acgaggcgtt gcgatggccg aggaacacgt
     1381 catccaagag aaggccctcc gccgattttg cgaacaggtc ctcgcgaagc ttggcgtccc
     1441 ggccgaagac gctcgcgtga ctacggacgt gctggtcctc gctgaccttc gcggcatcga
     1501 ctcccatggc gtcgca
//
LOCUS       DATLMA010000387         1145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_881395, whole genome shotgun sequence.
ACCESSION   DATLMA010000387 DATLMA010000000
VERSION     DATLMA010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_881395"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VNA10_04960"
     CDS             complement(<1..847)
                     /locus_tag="VNA10_04960"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HVG37061.1"
                     /translation="MIRFGPSGIPLSCKGRTLRDGIEDIHNLGLTAMEVQLVRVNLNE
                     RYAGDEDLGRTPREIPGELVVQIGRKEDRKEVLISSLDAKIEKGDVLYSLASGIASDY
                     HELEELGDLAREMDIELSLHTPYYMDLADADGLAEKSVRSVIWGGMLAAAMGSPIVVT
                     HLGMFGELEPKEAMNRIAKNLRLIRDAYKKGKIGSRLGIEASGRTEVVGSLDELLTLV
                     KNAKGVLPVLNFAHVHARGFGLFKRPEDFDEVLTKVEKVSDGGHIHAHFSGVEHANGN
                     ELRYTP"
BASE COUNT          186 a          407 c          334 g          218 t
ORIGIN      
        1 tcggcgtgta ccgcaactcg ttcccattcg catgctcgac gccgctgaag tgcgcgtgga
       61 tgtggccgcc gtccgacacc ttctcgacct tcgtgagcac ttcgtcgaaa tcctccggcc
      121 gcttgaacag accgaaaccg cgcgcatgga cgtgcgcgaa gttcaggacc ggcaggacac
      181 ctttcgcgtt cttgaccagg gtgagcagtt cgtcgaggct cccgacgacc tcggtgcgcc
      241 cgctcgcctc aatcccgagc cgggaaccga tcttgccctt cttgtacgcg tctcggatga
      301 ggcgcaggtt cttcgcgatg cggttcatcg cctctttcgg ctcgagctct ccgaacatcc
      361 cgaggtgcgt cacgacgatc ggcgagccca tcgcggccgc gagcatgccg ccccagatca
      421 cgctccgcac gctcttctcc gccaacccgt ccgcgtcggc cagatccatg tagtacggcg
      481 tgtgcagcga gagctcgatg tccatctccc gcgcgaggtc tccgagctcc tcgagttcgt
      541 ggtagtcgct cgcgatcccg gaagccaggc tgtagaggac gtcccctttc tcgatcttcg
      601 cgtcgagaga ggagatcagg acctccttgc gatcttcctt ccggccgatc tgaacgacga
      661 gctcacccgg aatctcgcgc ggggttcgac cgaggtcctc gtcgcccgca tagcgctcgt
      721 tgaggttcac ccggacgagc tggacctcca ttgcggtgag gccgaggttg tggatgtcct
      781 cgatgccgtc cctcagcgtc cggcccttgc acgacagcgg gattcccgaa ggtccaaaac
      841 ggatcacgaa ctcacccccg acgaagaagc cgccacttga ctattattct ggcctgcctg
      901 atattagtat ctttgccccg gcgcggccct ccaaggccct ggaaggcgtc aggatccgga
      961 cccggcccgc gagagaccgc aggcctggta gccggttctg ccccgatcta ccgggcagct
     1021 ttaagcggtc cggcctcatc cggcaaccgc cgccgtgagg cgcagctggt ggaggatgca
     1081 accgaacccg ccgccgcaac aaccgccata ccctgttccg ccgccgggca cggctcttcc
     1141 tccgt
//
LOCUS       DATLMA010000388         5073 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_640531, whole genome shotgun sequence.
ACCESSION   DATLMA010000388 DATLMA010000000
VERSION     DATLMA010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5073
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640531"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VNA10_04965"
     CDS             complement(<1..768)
                     /locus_tag="VNA10_04965"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HVG37062.1"
                     /translation="MRVISGRVFFRGQLEPLSIGIDETGRIVAIKKTLRGDEAIDHGD
                     ALILPGCVDLHVHMRDPGLTDKEDFSSGTRSAAIGGVTTVAEMPNTVPPVTTSPALDQ
                     KEAAVRGRATVDYALYAAPPDRDAVGRLGHAVAFKVFMAESTGNLAVPVARMEDILHA
                     AAKSPKVVVIHAEDPGKFTKQKARDLRGHSDARPKMAEETAVATIARVRGEARVHVAH
                     VTCVEALDQVPAAATCEVTPHHLFLDTSKPLGAKGKVN"
     gene            complement(755..1372)
                     /locus_tag="VNA10_04970"
     CDS             complement(755..1372)
                     /locus_tag="VNA10_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00296 family protein"
                     /protein_id="HVG37063.1"
                     /translation="MSVADREGECAVRIAREALDAYVLRRARRPVEIPKAFEEKSGAF
                     VTLNDHPSGLLRGCIGYPQPFFALVKSIEKGAEGAAEDPRFPRLSPEELDRVTVEVSI
                     LTPPQLIEVKKPKDLTKHVTPGADGLSVAQGQYRGLLLPQVAAEYGWDPAEFLSEACM
                     KAGLLADAWLDPATRVYKFQAEVFAETKPRGPVVRRTLEAARAGH"
     gene            1560..2063
                     /locus_tag="VNA10_04975"
     CDS             1560..2063
                     /locus_tag="VNA10_04975"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HVG37064.1"
                     /translation="MTQSPVTIRADATAKDAADLMRDREIGSLVVVETGKPMGIVTER
                     DIVTKIAAPDKQPSRVLVRDIMTSPVVVVHPHEEVAEAAKLMSARKIRRLPVVQEGKL
                     VGMITENDIIRVWPQLIEVTREYARAGLESQFAKGIEGHCEACGVYSTNLMWDRNLLA
                     CPECRGG"
     gene            2136..2543
                     /locus_tag="VNA10_04980"
     CDS             2136..2543
                     /locus_tag="VNA10_04980"
                     /inference="COORDINATES: protein motif:HMM:NF014845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V4R domain-containing protein"
                     /protein_id="HVG37065.1"
                     /translation="MARFVKVSQQELDSVRKLYESVMSYACHGLFFREGMVLAEEVTK
                     SIALGEDPLDVGRKVILERGWAEEVAFTDSGARVRGSIEAVPGGDVETCHRLRGILSK
                     LLEAKTRHRVRLAEVECVSTGGRECVFEKEGGA"
     gene            2540..2896
                     /locus_tag="VNA10_04985"
     CDS             2540..2896
                     /locus_tag="VNA10_04985"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HVG37066.1"
                     /translation="MTALVEMVRALRDVTKAEAIAVVNRDGGIVAADLPRNVSQETFS
                     IMCAAILGAGMTAATELGHAAPHRVLLECNDATVVIQEIGRRAMVVIVVPPERVVSDL
                     DSAISRFAQAASRDLD"
     gene            2941..3013
                     /locus_tag="VNA10_04990"
     tRNA            2941..3013
                     /locus_tag="VNA10_04990"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2974..2976,aa:Val,seq:tac)
     gene            complement(3025..3378)
                     /locus_tag="VNA10_04995"
     CDS             complement(3025..3378)
                     /locus_tag="VNA10_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37067.1"
                     /translation="MRWKWRLGFLVIAALEIPFVLWISTAMAAPPEILLYAGGILALV
                     LMAMLLVRPLLFTFLIVWLGGVMGSAWYFVRYLPPTAALGLGATVSTVVSAVGAPLAS
                     RAFGVVLRQRLWIRH"
     gene            complement(3393..4163)
                     /locus_tag="VNA10_05000"
     CDS             complement(3393..4163)
                     /locus_tag="VNA10_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HVG37068.1"
                     /translation="MDLEPVPDEPALLADDMLVVADLHIGIEEELQEKGIRVPSRAEV
                     MGRKLIELADRRGATRLVILGDVKHLVPKMASRERRDVYVFFRDLAPTFREVYIAQGN
                     HDGMLKNIVPRSVRFKPAYGFRIEDVGFCHGHAWPYKKVMEGSVLVMGHNHPAAAFRD
                     ALGARQIVPCWMRVPFLRKHKRYPKLPREAIVVPSFNELCGGMPVNDVRARFIGPLFD
                     EDLVRVEDASVHLLDGTNLGRLRDIKVDLGFRPEDYRQ"
     gene            complement(4220..>5073)
                     /locus_tag="VNA10_05005"
     CDS             complement(4220..>5073)
                     /locus_tag="VNA10_05005"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HVG37069.1"
                     /translation="SKIAAMIGPGEFTLYPVPKATSHKGQNGRVLVIAGGPYTGAPAL
                     VGYGALGVGADLIHVATPALAAQVVASYSPMFIVHPLVGHRLLREDTRQIVELASRAD
                     AIAIGPGLGDAEGTLDAVKEIVRSVSLPLVVDADAVRAVASDPKCLVGKRAVITPHSR
                     EFQTLTGKALPDAPEDRAEIVREAAKAFGATILLKGHVDIVTDGTRVKFNYTGNPGMT
                     VGGTGDVLCGVVTGLMSKGMSPFDAARLGAFTNGHAGDLAFKVKSYGLTSVDVAENLG
                     RVLAEFL"
BASE COUNT          873 a         1672 c         1646 g          882 t
ORIGIN      
        1 gttcactttc cccttggcgc cgagcggctt cgaggtgtcg aggaacagat gatggggcgt
       61 cacctcgcag gtcgccgccg cgggcacctg atccagggcc tcgacacagg tgacatgggc
      121 cacgtggacc cgcgcctccc cccggacgcg ggcgatggtc gcgaccgcgg tctcctccgc
      181 catcttcggt cgagcgtcgg agtggcctcg caggtccctc gctttctgct tcgtgaactt
      241 tcccgggtct tccgcgtgga tgacgacgac cttcgggctc ttcgccgcag cgtggaggat
      301 gtcctccatt cgagcgacgg gcaccgcgag attccccgtg gattccgcca tgaagacttt
      361 gaacgcgacc gcgtggccga gtcgtccgac cgcgtcccta tccggaggcg ctgcgtacaa
      421 tgcatagtct acggtcgccc gtcctcggac agcggcctct ttctgatcga gcgccgggct
      481 cgtggtcacc ggcgggacgg tgttcggcat ctccgcgacg gtcgtcacgc cgccaatcgc
      541 cgcggaacgc gtcccgctcg aaaagtcctc cttgtctgtg agtcccggat ctcgcatgtg
      601 gacatggagg tccacgcacc cggggaggat cagcgcgtcg ccatggtcga tcgcttcgtc
      661 gccccggagc gttttcttga tcgcgacgat ccgacccgtt tcgtcgatcc cgatgctcaa
      721 gggctcgagc tgaccgcgaa agaagacgcg gccgctaatg acccgcacgc gccgcctcca
      781 aggtccggcg cacgacggga ccgcgcggtt tggtttccgc gaagacctcc gcctggaact
      841 tgtacacccg cgtcgccggg tcgagccacg cgtccgcgag gaggcccgcc ttcatgcacg
      901 cctcggacaa gaactcggcc gggtcccacc cgtactcggc ggcgacctgc gggagcagga
      961 ggccgcggta ctgaccctgc gccacgctca atccatccgc gcccggggtc acatgcttcg
     1021 tgagatcttt cggcttcttc acctcgatca actggggcgg cgtcaagatg ctgacctcca
     1081 ccgtcacgcg gtcgagctcc tccggactca ggcgagggaa ccgcggatcc tccgcggcgc
     1141 cttcggcccc tttctcgatc gacttgacga gtgcgaagaa cggttgcggg tagccgatgc
     1201 agccgcgcag caggccactc ggatggtcgt tgagggtgac gaacgctccg gacttctctt
     1261 cgaaggcctt ggggatctcg accggacgtc gcgcgcgcct caatacgtag gcgtcgaggg
     1321 cctcgcgcgc gatgcgaacg gcgcattcgc cctcgcggtc ggcaaccgac atccgcctcg
     1381 acaacaggac gcgtatctta acattgtcgg cgcgattctc cggttgagtc tcgcaattca
     1441 gtttgcggcg aattctttcg atgaaccgcg tgtgtgtgat ggtctcgcaa cctttatcgg
     1501 ccccgagctc tcattcaccg cggcagatca tgcgcgcccg ggttcccgtc gtcgaaatca
     1561 tgacacagtc ccccgtgacg atccgggccg atgcgaccgc gaaagacgcc gcggacctca
     1621 tgcgagaccg ggagatcggg agcctcgtgg tcgtcgagac cggcaagccg atgggtatcg
     1681 tgacggagcg ggacatcgtg acgaaaatcg cagcgcccga caagcaacca agccgcgtcc
     1741 tcgtgcgcga catcatgacc tctccggtcg tcgtcgtcca tcctcacgaa gaagtggccg
     1801 aggccgcgaa gctcatgtca gcgcgcaaga tccgcaggct tcccgtcgtc caggaaggaa
     1861 agctcgtcgg gatgatcacg gagaacgaca tcatccgggt atggccgcag ctgatcgagg
     1921 tcacgcggga atacgcgcgg gccggactcg agtcgcagtt cgccaagggc atcgaaggcc
     1981 actgcgaggc atgcggagtg tactccacaa acctgatgtg ggatcggaac ctgctcgcgt
     2041 gtccggagtg ccgcggaggc tgacaggccc ttcgagtaga gtggctggat aacagccgcg
     2101 gaacctttat aggcggtcct caagttcggc ggccgttggc ccggttcgtc aaggtttctc
     2161 agcaagaact cgattcggtc cgcaagctct acgagagcgt catgtcgtac gcgtgccacg
     2221 gcctcttctt ccgcgagggg atggtccttg ccgaagaggt cacgaagagt attgccctcg
     2281 gcgaagatcc gctcgacgtc ggcaggaagg tgatcctcga gcggggctgg gcggaggagg
     2341 ttgccttcac cgactccggc gcgcgcgtgc gcggctccat cgaggcggtc cccggaggcg
     2401 acgtggagac gtgtcaccgc cttcgcggga ttctctcgaa gctgctggag gcgaagacca
     2461 gacaccgggt ccgattggcg gaagtggagt gcgtgagcac cggcggtcgt gaatgcgtgt
     2521 tcgaaaagga gggcggagca tgaccgcgtt ggtggaaatg gtccgcgccc tccgcgacgt
     2581 gacgaaggca gaggccattg cggtggtcaa tcgagacggt ggcatcgtcg ccgccgatct
     2641 tccgcggaat gtttcgcagg agacgttctc gatcatgtgc gcggcgattc tcggggcggg
     2701 catgaccgcg gcaacggaac taggacatgc ggcgccccac cgcgtcctcc tcgagtgcaa
     2761 tgacgcgacc gtcgtcatcc aggaaatcgg ccgacgcgcc atggtggtca tcgtcgtacc
     2821 tcccgagcgc gtggtctcgg atctcgattc ggcgatttcg cggttcgcgc aggcggcctc
     2881 gagagacttg gactgagcgc tcccataagc cttaatcaat gccgcgacgg ttcgcaccgc
     2941 gggcccgtgg tctagtggtt atgatgcgac tcttacaaag tcgagatcgt cggttcaatt
     3001 ccggccgggc ccatccgtcc gcccctagtg ccgaatccag agtcgttgtc ggaggaccac
     3061 gccgaacgcg cgggacgcga ggggcgcgcc gaccgccgac acgaccgtag acacggtcgc
     3121 cccgagtccg agcgccgcgg tcggcggcag atagcggacg aaataccacg ccgaacccat
     3181 cacgccgcca agccacacga tcaggaacgt gaacagaagc ggccggacga ggagcatcgc
     3241 catcagcacg agcgcgagga tcccgccggc gtagaggagg atttctggcg gcgcggccat
     3301 cgcggtcgag atccacagca cgaacggaat ctccagggct gcgatgacga ggaaacccag
     3361 ccgccacttc caccgcatct ccgtcgatca cctcactgtc ggtagtcctc cggtcgaaag
     3421 cccagatcca ctttgatgtc ccgcaatcgt ccgaggttcg tcccgtcgag gaggtggacg
     3481 gacgcatcct ccacccggac caggtcctcg tcgaacaggg gcccgatgaa ccgggcgcgg
     3541 acgtcgttca ccggcattcc cccgcacagt tcgttgaagg aagggacgac gatcgcctcc
     3601 cgcgggagtt tcgggtagcg tttgtgcttc cttaggaacg gcacccgcat ccagcacgga
     3661 acgatctgcc gggcccccaa ggcgtcgcga aacgcggccg ccggatggtt gtgtcccatg
     3721 acgaggacgg atccttccat gactttcttg tacggccagg cgtgaccatg gcagaaccca
     3781 acgtcctcga tgcgaaagcc gtacgccggt ttgaagcgca cgctgcgggg cacgatgttc
     3841 ttcagcatgc cgtcgtggtt gccctgcgcg atgtacacct cgcggaacgt gggcgccagg
     3901 tcacggaaga acacgtagac atcgcgtcgc tcccgggagg ccatcttcgg cacgaggtgc
     3961 ttcacgtcgc ccaggatcac gagtcgcgtc gcgcctcgtc ggtcggccag ctcgatcagc
     4021 tttcgaccca tcacctccgc acggctgggg acgcggatac ccttctcctg caactcctct
     4081 tcgatcccga tgtgcaggtc cgcgacgacg agcatgtcgt ccgccaggag ggcgggctca
     4141 tcgggaacgg gttcgaggtc caccccggct ccaagggcgg gtctgcctaa tggttgtgcc
     4201 gggtcgcgat cgccgtggct cagagaaatt ccgcgaggac gcgaccgagg ttctcggcga
     4261 cgtccacgga ggtcaatccg taactcttga ccttgaaggc gaggtccccg gcatggccgt
     4321 tcgtgaaggc gcccagccgc gcggcatcga acggcgacat tcctttcgac atgaggccgg
     4381 tcacgacccc gcacaggacg tcgcccgtcc cgcccaccgt catcccggga ttcccggtgt
     4441 agttgaactt cacccgcgtc ccatcggtca cgatgtccac atggcctttg aggaggatcg
     4501 tcgcaccgaa cgccttcgcg gcttcccgga cgatctcggc gcggtcttcc ggagcgtccg
     4561 ggagcgcctt cccggtcaag gtctggaact ctcgggagtg cggggtgatc acggcgcgtt
     4621 tcccgacgag gcacttcggg tccgaggcga ccgctcggac cgcgtctgcg tccacgacga
     4681 gcgggagcga cacgctccgg acgatttcct tcacggcgtc caatgtcccc tcggcgtcgc
     4741 cgagtccggg accgatcgcg atcgcgtccg cgcgcgaggc caattcgacg atctgccgcg
     4801 tatcctccct caggagtcga tgcccgacga ggggatgcac gatgaacatc ggggagtacg
     4861 atgcgacgac ctgcgctgcg agggccggcg tcgcgacgtg gatgagatcc gcaccgacgc
     4921 ccagggcgcc gtatccgaca agcgccggcg cgccggtata cggtcccccg gcgatcacga
     4981 ggacgcgacc gttctgaccc ttgtggctcg tcgctttcgg gaccgggtag agcgtgaact
     5041 ccccgggccc gatcatcgcg gcgattttcg acg
//
LOCUS       DATLMA010000389         1013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_404040, whole genome shotgun sequence.
ACCESSION   DATLMA010000389 DATLMA010000000
VERSION     DATLMA010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404040"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VNA10_05010"
     CDS             <1..438
                     /locus_tag="VNA10_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37070.1"
                     /translation="RRSRVRIFLAFLVALGVAGTIFAYELSIFMGPSLLVPVGRAFRE
                     SATIEFTVAEGPGRLVGSWHAPTGGMIWLNPPTDSGFWMLPCIASRDWNGHANLSLSP
                     GHYRLLISPTPPGVLIVTGTMQVIYPGDSNTTDHALFASWCGG"
     gene            507..>1013
                     /locus_tag="VNA10_05015"
     CDS             507..>1013
                     /locus_tag="VNA10_05015"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HVG37071.1"
                     /translation="MFLLGHLGIGLGLAWLLSWKSPTRIDYRFVLFGAILPDLIDKPL
                     AYVTGLDSRLWAHTFLFLFAILALSFVPTLRGFRLVGFGVATHLLLDTIWNQPAIVLY
                     PAYGWAFPPAPFNVGRWYDTLLHDPYVQFGEIVGFVSLIAFAWVHGIRSWKTLWDFIS
                     HGTLPLFGP"
BASE COUNT          147 a          335 c          298 g          233 t
ORIGIN      
        1 cggcgttcgc gggttcggat tttcctagcg ttcctggtgg ccctcggcgt cgcggggaca
       61 atcttcgcct acgaactgtc gatcttcatg ggaccgtcct tactcgttcc tgttggtcgg
      121 gccttccgcg agtcggcaac aatcgagttc acggttgcgg aggggcccgg ccgcctcgtc
      181 gggagctggc atgcaccgac gggaggaatg atctggctga acccgccgac cgacagcggc
      241 ttctggatgc tcccttgtat cgcgtcgcgc gactggaacg gccacgcgaa tctctccctg
      301 tcgccgggcc attaccggct gctgatttca ccaactcccc cgggcgtcct aatcgtcacg
      361 gggacgatgc aagtcatcta tcccggagat tcgaacacga ccgaccacgc tctcttcgcg
      421 agctggtgcg gcggctagcg aaccgaccgg atcgaaatct cgaagtgccg taatcgtaaa
      481 gtgcgagggg gtcctcgggt ggccacttgt tcctcctcgg tcatctcggc atcgggctcg
      541 gcctcgcgtg gctcctctcc tggaaatcgc cgacccgaat cgattatcgc ttcgtgctct
      601 tcggggcgat cttgcccgat ctcatcgaca agccgctcgc ctacgtgacc gggctcgact
      661 cacgtctctg ggcccacacg tttctcttcc tgtttgcgat cctcgcgctg agcttcgtcc
      721 cgacgttgcg cggcttccga ctcgtggggt tcggcgtcgc gacacatttg ctgctcgaca
      781 cgatctggaa tcaaccggcc atcgtcctct atccggcgta tggatgggcg ttcccgccgg
      841 ccccgttcaa cgtgggccgt tggtacgaca cgctactcca tgacccgtac gtccagttcg
      901 gtgaaatcgt cgggttcgtc tccctgatcg cgttcgcgtg ggtccacggg atccggtctt
      961 ggaagacgct ctgggacttt atcagccatg gtacgctccc tttgttcgga ccc
//
LOCUS       DATLMA010000390         1279 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_826552, whole genome shotgun sequence.
ACCESSION   DATLMA010000390 DATLMA010000000
VERSION     DATLMA010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826552"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VNA10_05020"
     CDS             <1..304
                     /locus_tag="VNA10_05020"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HVG37072.1"
                     /translation="GVILRNISSASADITIVTNAMSAAVPFSPQVYHIAVGGTVTWIN
                     KDASGTAHTVTSNVTGQFDSGTLTTEATFAHTFATVGTYDYHCTPHPQMWGEITVS"
     gene            complement(369..659)
                     /locus_tag="VNA10_05025"
     CDS             complement(369..659)
                     /locus_tag="VNA10_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HVG37073.1"
                     /translation="MPNYITLGNWTEQGIKTVKESPKRADAVTALANKLGAKMQIFYT
                     MGRYDIVALTEAPNDDVAMQLLLEIGKLGNVKTQTLKAWTTSEATKVISKLQ"
     gene            912..>1279
                     /locus_tag="VNA10_05030"
     CDS             912..>1279
                     /locus_tag="VNA10_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37074.1"
                     /translation="MKSIVPLVLVVLGFVVIAAGVQVSAASSNTSSSPSYNITTLAGK
                     VASIQGTQGFYLRASALIEQEADNSEVGASPPYSPDPITPMFVLSSPLDGTSVGPGAV
                     VVNQDPNAATQNEPAIAVDPG"
BASE COUNT          236 a          396 c          377 g          270 t
ORIGIN      
        1 gggtgtgatc ctgcgcaaca tttcgtcggc aagcgcagat atcacgatcg tgaccaatgc
       61 gatgtcggcc gcggtgcctt tctctcctca ggtctaccac atagcggtcg gtggtacggt
      121 cacgtggatc aacaaggacg cgagcgggac cgcgcacacc gttacaagca acgtgaccgg
      181 gcagttcgac tccggtacct tgacgaccga ggcgacgttc gcccacacgt tcgcgaccgt
      241 ggggacgtat gactaccact gcacgccaca tccccagatg tggggcgaaa tcaccgtctc
      301 gtgagtggcc ttccggacgc gtggaggaac gtcctcgcgg gaggtggaca attcgccggt
      361 aggtccgact actgaagttt cgagatgacc tttgtcgctt cagaggtggt ccaagccttc
      421 agcgtctgcg tcttgacgtt cccgagcttc ccaatttcga gaaggagttg catcgcgaca
      481 tcgtcgttcg gcgcctccgt cagggccacg atgtcgtagc ggcccatcgt gtagaaaatc
      541 tgcatcttgg caccgagttt gttggccaag gcagtcacgg cgtccgcgcg cttgggcgac
      601 tccttcacgg tcttgattcc ttgctccgtc cagttcccga gggtaatgta gttcggcatc
      661 tccgatcccc gcggaaaacg catcatgagg cgagtatata atcgcgcggg acccgtgctc
      721 accccgattc gtcttcgtcc ggagaagcgc agcatgcgcg ttgcgcgtgc gaggcctctt
      781 aacaaacgaa ttcgttatcg catttgagag cgttgatgcc cgtcctcgaa acgattcgga
      841 cgtaacgttt tcggtttgca acagggttaa atgccgatca ggtctccagg cgggcgaggt
      901 gggggacttc catgaagtcg atcgttccgc tggttctcgt cgtgctgggc ttcgtcgtga
      961 ttgccgccgg agtccaggtg tctgccgcat cgtcgaacac atcctcgtcg ccgtcgtaca
     1021 acatcacgac gttggcgggc aaggtcgcct cgatccaggg cacgcaagga ttctacctcc
     1081 gcgcgtccgc cctcatcgag caagaagccg ataattcgga ggtcggggct tcccctccct
     1141 actcgcccga tcccatcaca cccatgttcg ttctctcgag cccgctcgac ggcacatcgg
     1201 tcggaccagg ggccgtcgtc gtgaaccagg acccgaatgc cgcgacccag aatgaacccg
     1261 cgatcgcggt cgatcccgg
//
LOCUS       DATLMA010000391         3498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_458643, whole genome shotgun sequence.
ACCESSION   DATLMA010000391 DATLMA010000000
VERSION     DATLMA010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458643"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="VNA10_05035"
     CDS             complement(<1..643)
                     /locus_tag="VNA10_05035"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HVG37075.1"
                     /translation="MRGGPYAAIALAVISVSFASIFITWSESPPITIALYRLAIATLT
                     IGATILVRSGVLHRENTLLRIPRRDAAVMALIGGILATHFALWISSLKVEGESIASSV
                     VLVTSHPLMVGVLSHYVLRERLNRWMAVGIVIGFAGVVSIALADYGFAGSLLYADILA
                     FSGGVMAGFYFLLGRRVRQRVALLDYAFLVYASATAVLFVYALAFGSSLAPVGD"
     gene            complement(685..1506)
                     /locus_tag="VNA10_05040"
     CDS             complement(685..1506)
                     /locus_tag="VNA10_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37076.1"
                     /translation="MRRPPRSLVWMAVFAIAVASVLATAPRVAAAQNAPAWTQGDFWV
                     YARTAGSAASTVRIDVNERTTLTLPSGTYNVWHLTTTTTAAGGNSTVQNSWVVDSNLA
                     IAKANFTLPLLGEVQVTLDPPQAGAVFPLTAGAQWSLNTTLRVVGISFSLNIAYSGTV
                     LREQSTSVAAGTFNVAVIRNPSTGTAHSEDQYSDGAGNYVKRESYDGSGNRVADQELT
                     SYRFQSGSFGLLLIIGSAVAIAAAAIALFIVVRRRRGGSMPPPPGASPPQTPPPP"
     gene            1624..2487
                     /locus_tag="VNA10_05045"
     CDS             1624..2487
                     /locus_tag="VNA10_05045"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010965995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HVG37077.1"
                     /translation="MADLRKIAVVGAGTMGAGIAQACAGAGFQVAMRDIDQRLVDGGF
                     RRIREPLQKRVERGKMTQVEVDSILAKIRGVVSLKEAIDDAQLVIEAVFEKMEIKKEL
                     YAELDRLCPPTVVFASNTSSLSITEMASATKRADRVVGMHFFNPAPVMKLVEVIRGSE
                     TSDDTVRLVKDVCTKLGKEAVEVKESPGFVVNRLLVPMMNEAFNLLQEGVASPEDIDK
                     AMKLGTNMPMGPFELADYTGLDIGLDVMEVLFRETGDPKFRPSPLLRKYVRAGRLGRK
                     TGRGVYEYPQA"
     gene            complement(2495..3391)
                     /locus_tag="VNA10_05050"
     CDS             complement(2495..3391)
                     /locus_tag="VNA10_05050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37078.1"
                     /translation="MHTLARIVVFGLALLLIASLGLALQPAKASMDRPTWSAGNFWVY
                     NISSGSGPATVTGTFRMDVTGTETVTLNGTGYPSYRVASDLKIPLGGGLTFEVSPVIW
                     FSVDTLAVVRIQAVVPPILNLTTQTTVVIAGSPPQTIQWPLTAGATWSSSTVVWTSSM
                     NATRTTWSHATLSTTFSVQSDATITVPAGTFSTTPLKELSANGTYTTNFWSATVGNWV
                     RVGSYNSTGQNSQNFNLTSYGYSSPGFFGSTLLGLPVWIWLILLVVIVVAIIGFFAVR
                     RRKPPAVMMPPSMPPQEPPMGP"
BASE COUNT          655 a         1087 c         1195 g          561 t
ORIGIN      
        1 ggtctcccac cggcgcgagg ctcgagccga acgccagggc atacacgaac aggaccgccg
       61 tggcgctcgc gtagacgagg aacgcgtaat ccagaagggc gacgcgctgc cgcacccgcc
      121 ggccgaggag gaagtagaac ccggccatca cacccccgct gaaggcgagg atgtccgcgt
      181 aaaggaggct ccccgcgaat ccgtagtcgg cgagggcgat cgaaacgacg ccggcgaagc
      241 cgatgacgat ccccacggcc atccagcggt tcaggcgctc gcggaggacg tagtgcgaga
      301 ggacgccgac catcagcgga tgggacgtga ccagcacgac cgacgacgcg atggactccc
      361 cctcgacctt caacgaggag atccacagcg cgaagtgggt cgcgaggatc ccgccgatga
      421 gggccatgac ggccgcgtcg cgccgtggaa tccggaggag tgtgttctcg cggtgaagga
      481 cgccgctgcg cacgaggatc gtcgccccga tggtcaacgt ggcgatggcc agcctgtata
      541 gggcgatggt gattggaggc gactcgctcc acgtgatgaa aatcgatgcg aacgagacgg
      601 aaatgaccgc caaagcgatc gccgcgtagg gtccgcctcg cacgcccggt cacgggtgcc
      661 gggcctatgt aacgcctgcg ccgctcaggg aggcggtggc gtctgcggcg ggctggctcc
      721 cggtggcggc ggcatcgacc cgcccctccg ccggcgcacg acgatgaaca aggcaatcgc
      781 ggctgccgca atagcgacgg cggagccgat gatgagcaac agtccgaagg atccggactg
      841 gaaccggtac gacgtcagtt cttggtcggc aacacggttt ccgctgccgt cgtacgattc
      901 ccgcttcacg tagttccccg cgccgtcgga atattggtcc tcgctgtgag ccgtgcccgt
      961 cgacggattg cggatgaccg cgacgttgaa cgtccccgcg gcgaccgacg tcgattgctc
     1021 ccggaggacc gtgccgctgt acgcgatgtt gaggctgaag gagatgccca ccacgcgaag
     1081 cgtcgtgttc agcgaccact gggctcccgc cgtcagcggg aagacggctc ctgcctgggg
     1141 cggatcgagc gtgacttgga cctcgcccag gaggggcaag gtgaagttcg cctttgcgat
     1201 ggcgaggttc gagtcgacga cccagctgtt ctgaacggtc gagttgccgc cggcggccgt
     1261 cgtggtcgtg gtcaggtgcc acacgttgta ggtgccggag ggcagcgtga gcgtcgtgcg
     1321 ctcgttcacg tcgatgcgga ccgtgctcgc ggcacttccc gccgtccgag cgtacaccca
     1381 gaaatcgcct tgggtccacg cgggcgcgtt ctgggccgcc gcgacccggg gtgcggtcgc
     1441 gagcaccgag gcgacggcga tcgcgaatac cgccatccag acaagggacc tcggagggcg
     1501 tcgcatcggg gttcctccgc cgcgccgata tcccggagga gatatgagcc taccgaaacc
     1561 gcttataaac acagccttta ggctcgcgaa gcgttctcgc gcgacgaggt ggcgaccgtg
     1621 aatctggccg atctccggaa gattgccgtc gtgggagcgg gtacaatggg cgcaggcatc
     1681 gctcaggcgt gcgccggcgc cggatttcaa gtggcgatgc gcgacatcga ccagcgcctc
     1741 gtcgacggcg gcttccgtcg gatccgcgaa ccgcttcaga agcgcgtcga acgcggcaag
     1801 atgactcagg tcgaagtcga ctcgatcctc gcgaagatcc gaggcgtcgt gtcgctgaaa
     1861 gaggcgattg acgatgccca gctggtcatc gaggcggtct tcgagaagat ggagatcaag
     1921 aaggagctct atgcggaact cgaccggctc tgcccgccta cggtcgtgtt cgcctcgaac
     1981 acatcctccc tgagcatcac ggagatggcg agcgcgacga aacgcgccga ccgcgtcgtc
     2041 ggcatgcact tcttcaatcc ggcgccggtc atgaaactcg ttgaggtgat ccgcggctcc
     2101 gagacctccg acgacacggt gcggctcgtc aaggacgtct gtacgaagct cggcaaagag
     2161 gccgtcgagg tcaaagagtc gccggggttc gtcgtgaacc gactcctcgt gccgatgatg
     2221 aacgaggcgt tcaacctcct ccaggaaggc gtcgcgagcc cggaggacat cgacaaggcg
     2281 atgaagctcg gcacgaacat gccgatgggg ccgttcgaac tcgcggacta cacgggcctc
     2341 gacatcggcc tcgacgtcat ggaggtcctc ttccgcgaga cgggcgatcc gaagttccgg
     2401 ccctcgccgc tcctgcggaa gtacgttcgg gctgggcggc tcggaaggaa gacgggccgc
     2461 ggtgtgtacg agtaccctca ggcgtgatgc gatcctaggg gcccatcggc ggttcctgcg
     2521 gcggcatcga cggaggcatc atcacggccg gtggcttgcg gcgccggacg gcgaagaacc
     2581 cgataatggc caccacgata acgacgagta ggatgagcca aatccagacc ggcaacccga
     2641 ggagggtgga gccgaagaac ccgggactcg agtagccgta ggacgtcaga ttgaagtttt
     2701 gcgagttttg cccggtgctg ttgtaactgc ccacgcgcac ccagttgccg accgtggccg
     2761 accagaagtt cgtcgtgtag gttccgttcg cgctcaattc tttgagcggc gtcgtcgaga
     2821 aggtcccggc aggcaccgtg atcgtcgcgt cagactggac ggagaaggtc gtcgacaagg
     2881 tcgcatggga ccatgtcgtc cgggtcgcgt tcatcgacga tgtccagact acggtggagc
     2941 tgctccatgt cgcgcccgcg gtcagcggcc actgaatcgt ctggggcggg ctccctgcga
     3001 tgacgacggt tgtctgggtc gtgaggttca ggatcggcgg gacgacggct tgaatcctca
     3061 cgaccgcgag cgtgtccacg ctgaaccaga tcaccgggga gacttcgaag gtgagtcctc
     3121 cgcccagggg gattttgagg tctgacgcca cacggtagct cggatatccg gttccgttca
     3181 gcgtgaccgt ctcggtcccg gtgacgtcca tccggaacgt cccggtcacc gtcgcggggc
     3241 cagatccgga gctgatgttg tatacccaga agttgccggc ggaccaggtc ggccggtcca
     3301 tcgaggcctt cgccggctgc aacgcgagcc ccaaagacgc gatcaacagg agtgcgagac
     3361 caaagaccac gattcgcgcg agggtatgca tccatcccgc cggactcccc gacggcggcg
     3421 cgggcgtatg agcttaccgg tgctccaagg aacgttcatc cccagcagaa gcattctgcg
     3481 accggaggac tcccatgc
//
LOCUS       DATLMA010000392         1626 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_641452, whole genome shotgun sequence.
ACCESSION   DATLMA010000392 DATLMA010000000
VERSION     DATLMA010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_641452"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..1194
                     /locus_tag="VNA10_05055"
     CDS             196..1194
                     /locus_tag="VNA10_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37079.1"
                     /translation="MRACMGRPFREALASTPVVLEIVPPGRRVSEKAVNAFVDRVRGS
                     VRSLENLNGVNIPEVLEENHAGQPFYRDLDPGDFAAQLGDLGVDPIVNKVVAHIPSEA
                     VLRRWIRESVEDHGFRNFVLVGGNSSRIRYPGPTVVDANRILRTVTKGRHDIALGNIT
                     IAERDHEVDRLVEKTRAGCDFFTTQVLFEAEPMATVLRTYGRRCSSQNLKPATVLLSF
                     APVSDYQDIEFLVWLGATVSPRTEEALLPAGGTSGRASLEVAHTLWSHLHAAAAQSRP
                     PVPLGVNIEEVSAHNFDLAVQMAREFPSWHGGAATTEGTSHIAPDPGDSGRTRGSR"
     gene            1325..>1626
                     /locus_tag="VNA10_05060"
     CDS             1325..>1626
                     /locus_tag="VNA10_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37080.1"
                     /translation="MGKKDRDEWIVKCPKCGRIRESCRHVSRDDVRRIIRLLDAGVEV
                     YQAEDEREPTESHVHEPPRPVAQIVAPRFTMGDLVLAETTREGLLDALTELRHKGL"
BASE COUNT          290 a          522 c          519 g          295 t
ORIGIN      
        1 ttgttgctcg cggtggtgct cttggcggac ctttgcgtgt ccttctttgg gctcatcgaa
       61 gcctcctcaa atcgtgattg atggtcattg aaatgaagtt ttcacccacc cggcgctgcg
      121 tatttaacca aaaaaccgaa aattcgctaa ctccccccat tctcgttgtc aacgttcaag
      181 tatctccgcg tgcccatgcg ggcctgcatg ggtcggccat tccgcgaagc gctcgcgtcc
      241 acgcccgtcg tcctcgaaat cgtcccgccc gggaggcggg tgagcgagaa agcggtgaac
      301 gcattcgtcg atcgggtccg aggctcggtc cgctccctcg agaacttgaa cggtgttaac
      361 atcccggagg ttctcgagga gaaccatgca ggccaaccgt tctaccgcga tctggatccg
      421 ggcgacttcg cggcccagtt gggggacctc ggagtggacc caattgtgaa caaggtcgtc
      481 gctcacatcc cgtcggaggc ggtccttcga cgttggatcc gcgaatccgt cgaagaccac
      541 gggttccgga acttcgtttt ggtcggaggg aacagcagtc gcatccgcta ccccgggcca
      601 accgtcgtcg acgcgaaccg catcctgcgg acggtgacga aggggcggca cgacatcgcc
      661 ctcggcaaca tcaccatcgc ggaacgcgat catgaggtcg atcgtctcgt ggagaagacg
      721 cgtgcgggat gtgatttctt cacgacccag gtgctcttcg aagcggagcc gatggcgacg
      781 gtcctccgga cgtacgggag gcgatgttcc tcgcagaacc tgaaaccggc gaccgtcctg
      841 ttgagctttg caccggtctc ggactaccag gacatcgagt tcctcgtgtg gctgggagcc
      901 acggtgtcgc cgaggaccga agaggccctc cttcccgccg gaggcacctc cggacgggcg
      961 tccctcgagg tcgcacacac cctgtggtcg catctccacg cggccgcggc ccaatcgcgg
     1021 ccgcccgtcc cgctcggggt gaacatcgag gaggtctcgg cccacaactt cgacctcgcg
     1081 gttcagatgg cccgcgagtt cccctcgtgg catggagggg ccgccaccac cgaagggacg
     1141 tctcatatcg caccggatcc cggggattcg ggccggacgc gcggatcacg atgattgaac
     1201 ccttcggcaa acgctcgcaa ggtgcgatcc ggagtgcgcc cggcgatgtt taaatagctc
     1261 cgcgaatctc tgcgctgcac gcctgtcggg ccatcgtcgg ccggggtgcc tcgggggaac
     1321 gaggatggga aaaaaggacc gggacgagtg gatcgtgaag tgcccgaagt gtgggcgcat
     1381 ccgcgagtcg tgccgccacg tttcccgaga cgacgttcgt cggatcatcc ggctcctcga
     1441 tgccggcgtc gaggtctacc aggcggagga cgagcgcgag ccgaccgaat cgcacgtcca
     1501 cgaaccgccg cggcccgtcg cgcagatcgt cgcgcctcgc ttcacgatgg gggacctcgt
     1561 cctcgccgag acgacgcggg aaggcttgct cgacgcgttg acggagctgc ggcacaaagg
     1621 cctcat
//
LOCUS       DATLMA010000393         2371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_702699, whole genome shotgun sequence.
ACCESSION   DATLMA010000393 DATLMA010000000
VERSION     DATLMA010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702699"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VNA10_05065"
     CDS             complement(<1..222)
                     /locus_tag="VNA10_05065"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37081.1"
                     /translation="MARPLVKTHIRGFDEDVLRGGIPQGHVVLVRGASGTMKSSLAYY
                     VLYHNALEGAPGLYVTLEQTAAGLLEHIAG"
     gene            complement(232..1941)
                     /locus_tag="VNA10_05070"
     CDS             complement(232..1941)
                     /locus_tag="VNA10_05070"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37082.1"
                     /translation="MNRADAINCRICGRPLESPTASSRKAPPVALQRVTSGEVFAAVF
                     AERSAKPSPDRATEASATSEGTAPAVEPNVEDNSDVLAAAVDGIRAKAQGEGHRFKPY
                     VRLSDRKVPTEAAKREAAKHLHDAVALLREMRFADAIEPLLKSISLDDEDRRAWVLLA
                     EAYLRLGRPYKSAVGYLRALELSPNDEQAWLGLGRVLRMLGDTQTAAAVLDRATLIHP
                     THAETWMERGLIFESLQNLPEAAVSFGKVLALRPEHRLAQEKAQEIGPKIAQRRASSA
                     APVSTVEIAPAAAESSGPTAEEERERDILDEMEEEFSIETSLEAGRSGAAVLAEAAEA
                     PRRVRTFVEGLDESLEGGVPWGHVVLIEGAPGTMKSSLGFSILLQNAARAGLHCLYLS
                     LEERGSSLLKQMGSLGLHLEVPKGSLVVLDPRTATNLLGEKKDWLDGLREGIQSVKDQ
                     RGLDLIVIDSLEALEVLAKFKDRRREIYRLFEWLRDLGITSFLVTERPDWVVAGHVLQ
                     GRWDEEFLADGVIHLRMHLVTDSTAQRRFRVVKMRGTKHNTGYLAMDFDEGRFRVTRA
                     MSS"
     gene            complement(1985..>2371)
                     /locus_tag="VNA10_05075"
     CDS             complement(1985..>2371)
                     /locus_tag="VNA10_05075"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37083.1"
                     /translation="MTTKKDIDGMDLVVIDSLEALEVLAKFEDRRTELFRLFEWLRDL
                     GATTLVLAEAASEASYLGLEAPQPRRDETFLADGIIELKMHPISDVEIQRRIRVQKMR
                     GSHHKTGFSALVFDEGRFQVMPVISP"
BASE COUNT          372 a          787 c          798 g          414 t
ORIGIN      
        1 tcccgcgatg tgttcgagaa ggcccgccgc ggtctgctcg agggtgacgt agaggcccgg
       61 cgcgccctcg agcgcgttgt ggtacaggac gtaatacgcg agggacgact tcatcgtccc
      121 gctcgcgccg cgcaccagga cgacgtggcc ttgcgggatc ccgccgcgca gcacgtcctc
      181 gtcgaatccg cggatgtgcg tcttgaccag cgggcgggcc atcgggtccc ctcaggagct
      241 catggctcgg gtgacgcgga agcggccctc gtcgaagtcc atcgcgaggt atccggtgtt
      301 gtgcttcgtc cctcgcatct tcacgacccg gaatcggcgc tgcgccgtcg agtcggtcac
      361 gaggtgcatc cgaaggtgga tcacgccgtc cgccaggaac tcctcgtccc agcgtccctg
      421 gaggacgtgg ccggcgacga cccagtccgg gcgttccgtg acgaggaaac ttgtgatccc
      481 gaggtcgcga agccactcga acagccggta gatctcccgc cgtcggtctt tgaatttcgc
      541 gaggacctcg agcgcttcga gcgagtcgat gacgatcagg tcgaggcccc gttgatcctt
      601 gacagactgg atcccttcac ggaggccgtc gagccagtcc ttcttctcgc ccaggaggtt
      661 cgtcgcggtc ctcggatcga ggacgacgag agaccctttc ggcacctcga gatggaggcc
      721 gagggacccc atctgtttga ggaggctcga gccgcgttcc tcgaggctta ggtagagaca
      781 gtgcaggccg gcacgcgccg cgttctgcag gaggatcgag aaacccaggg aggacttcat
      841 cgtccccggg gcgccttcga tgaggacgac atggccccac gggaccccgc cttcgagcga
      901 ctcatccagg ccctcgacga acgtgcgcac gcggcggggc gcctcggcgg cctccgcgag
      961 gaccgcggcg ccgctccgcc cggcctccag tgacgtctcg atcgagaact cttcctccat
     1021 ctcgtccagg atgtctcgct ctcgctcctc ctcggccgtc gggcccgacg attcagcggc
     1081 ggccggcgcg atctcaacgg tggacaccgg ggccgcggac gacgcccggc gttgcgcgat
     1141 cttcgggccg atctcttggg ccttctcttg cgcgagacga tgctccggtc gaagtgccag
     1201 gactttgccg aaactcacgg ccgcctccgg aaggttctgg agcgattcga aaatcagccc
     1261 gcgctccatc cacgtttccg catgggtggg atggatcaag gtcgcccgat cgaggacggc
     1321 ggcggccgtc tgcgtgtcgc cgagcatccg aaggacgcgg ccgaggccga gccacgcctg
     1381 ctcatcgttc gggctgagtt cgagggctcg gagatatccg accgcggact tgtacggccg
     1441 acccaggcgc agataggctt cggcgaggag aacccacgcc ctccgatctt cgtcgtcgag
     1501 agagatggac ttgaggagcg gctcgatcgc atcggcgaag cgcatctccc gcaggagcgc
     1561 gaccgcatcg tggaggtgct tcgcggcttc ccgtttcgcg gcctcggtcg ggaccttgcg
     1621 gtcgctcaag cggacgtacg gcttgaagcg atggccttcc ccctgggcct tcgcccggat
     1681 tccgtcgacg gcggcggcca acacgtccga gttgtcctcg acgttcggct cgaccgcggg
     1741 ggcggtccct tcggaggtcg cagaagcttc ggtcgctcga tcgggcgatg gcttcgcgga
     1801 cctttcagcg aacacggcgg caaagacctc gccgctcgtc acgcgctgca gggcgaccgg
     1861 aggagccttc cggctcgagg cggtcgggct ctcgagtggt cgaccgcaga tccggcagtt
     1921 gatggcgtcc gcccgattca aggacgcgca ggtcggacag ggaatcgaat tcggcatgga
     1981 ccacctaggg actgatgacc ggcatgactt ggaagcgccc ctcgtcgaac acgagcgcgg
     2041 agaatcccgt cttgtggtgc gaaccgcgca tcttctggac ccggattcgg cgttggatct
     2101 cgacgtccga gatcgggtgc atcttgagct cgatgattcc gtccgcgagg aacgtctcgt
     2161 cccgtcgcgg ctgcggggcc tcgagtccca ggtacgaagc ctccgaggcc gcctccgcga
     2221 gcacgagcgt ggtcgcgccg aggtcgcgca gccactcgaa gagccggaac agctccgtgc
     2281 ggcggtcctc gaacttcgcg aggacttcga gcgcctcgag ggagtcgatg acgaccaggt
     2341 ccattccgtc gatgtccttc ttcgtcgtca t
//
LOCUS       DATLMA010000394         1494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_38666, whole genome shotgun sequence.
ACCESSION   DATLMA010000394 DATLMA010000000
VERSION     DATLMA010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38666"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="VNA10_05080"
     CDS             <1..1247
                     /locus_tag="VNA10_05080"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG37084.1"
                     /translation="RSVGELTALGEISQVLSSTLDLETVLTTIVSRAVQLSGLDGGVV
                     FEYDDGTEEFVHRAATETGGTLAEARRTTRVRRGEGMVGQTAITLEPAQVPDITEPGA
                     YDSRLRGNLIESGVRAILAVPMVREGQLIGCLVVSRNRPGNFPAEAVELLRTFGTQSA
                     LAIQNARLFHEIADKSRQLEAASQHKSEFLANMSHELRTPLNAIIGFSEVLSEKMFGD
                     VNDKQAEYLQDILESGRHLLSLINDILDLSKIEAGRMELEQAEFDLPQAIQNALTLVR
                     ERALRRGIALHDVIDDRVADIRADERKVKQVILNLLSNAIKFTPEGGRIEVRAMPADG
                     TIEVSVTDTGVGIAPEDQETVFEEFRQVGTADKKAEGTGLGLALSRKFIELHGGKIWV
                     QSEVGRGSTFTFTLPVSPWPAN"
     gene            1232..1393
                     /locus_tag="VNA10_05085"
     CDS             1232..1393
                     /locus_tag="VNA10_05085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37085.1"
                     /translation="MAGELILIVEDNDKNRKLVRDVLTFKRYEVIETGPPRPSASRSR
                     RRSYSGRIR"
BASE COUNT          284 a          466 c          500 g          244 t
ORIGIN      
        1 cccggtcggt cggggagctg accgcgctcg gcgagatcag tcaggtcctc agctcgacgc
       61 tcgatcttga gacggtgctg accaccatcg tctcgcgggc cgtccaactg tcggggctgg
      121 atggcggggt ggtgttcgag tacgacgacg gcaccgagga gttcgtccac cgggcggcga
      181 ccgagacggg cggaaccctt gccgaagcgc ggcgaacgac ccgggttcgg aggggagaag
      241 ggatggtcgg gcagaccgcc atcacgcttg agcccgccca agtacctgac atcaccgagc
      301 ccggcgcgta cgacagtcgc cttcggggaa acctgattga gtctggcgtc cgagccatcc
      361 tggccgtgcc gatggtccgc gagggccagc tgatcgggtg tctcgtcgtg tcccgcaatc
      421 gccccggcaa cttcccagcc gaggcggtcg aactgctccg gaccttcggc acccagtccg
      481 cgctggccat tcagaatgcg cggctcttcc acgagatcgc ggacaagagc cgtcagctcg
      541 aagccgcgag tcagcacaag tccgaatttc tggccaatat gtcccatgag ctgcgcacgc
      601 ctctcaatgc catcatcggg ttctcggaag tcctctcgga aaagatgttc ggtgacgtca
      661 atgacaagca ggcggagtat ctgcaggaca ttctcgagtc cgggcggcat ctgctctccc
      721 tcatcaacga catcctcgac ctgtcgaaga tcgaggccgg gcggatggag ctggagcagg
      781 ccgagttcga cctgccccag gcgatccaga acgcgctcac gctggtccgc gaacgggccc
      841 tgcgccgcgg gattgccctt cacgacgtca tcgacgaccg ggtcgcggac atccgagcag
      901 acgaacgcaa ggtcaagcag gtcatcttga atctcctgtc gaacgcgatc aaattcacac
      961 ccgagggcgg tcggatcgag gtgcgggcca tgccggcgga tgggacgata gaggtgtcag
     1021 tcacggacac cggcgtcggg atcgcgccag aggatcaaga gaccgtgttc gaggagttcc
     1081 ggcaggtggg gacagcggac aagaaggcgg agggcaccgg cctcggactg gccctctccc
     1141 ggaagttcat cgagctccac ggcggcaaga tttgggtgca aagcgaggtc ggccgcggct
     1201 cgacgttcac cttcaccctc ccggtgagcc catggccggc gaactaatcc tgatcgtcga
     1261 ggacaacgac aagaaccgga agctcgtccg ggacgtgttg acgttcaaga ggtatgaggt
     1321 catcgagacc ggaccgccaa ggccctcggc ctcacgatcc cgccgtcgct cctacagcgg
     1381 gcggatcagg tgatcgatcc atgagaacgg cggtttcgtc aaggcagtcc tcggctgcgc
     1441 gcctcgcgtt tggaggttgg ctgaagagta gggcaatccg tgcggcggcg ggcc
//
LOCUS       DATLMA010000395         1645 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_281302, whole genome shotgun sequence.
ACCESSION   DATLMA010000395 DATLMA010000000
VERSION     DATLMA010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281302"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1645)
                     /locus_tag="VNA10_05090"
     CDS             complement(<1..>1645)
                     /locus_tag="VNA10_05090"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HVG37086.1"
                     /translation="IEAVFEDPELKRKVFRELDAAAPAKTILASNTSALPITEMAAAT
                     KRPQKVVGMHFFNPPMLMALVEVIRADTTSDATLQAAVDLAKSFGKTVVVVKKDVPGF
                     ITTRVLGPYFERAAWIHEREGIPIETIDAAMRFRAGFPMGPFELADQVGVDVLHHLIV
                     NAHRPMPRSVQDLIDRKKLGHKVGEGFYAYKEGRPKLTPEMGQAFDPIRILAPMINEA
                     AELVALDVASPSEIDEAMRLGTAFPKGPLATADDLGIDVVVAALNADKDAKPAKILEE
                     MVARGHLGVKSGKGFYDHGSGGSTMTYETLLVAHDATTHVATITINRPDRLNTLSPEV
                     FEELDKALSAFADDDGVRCVIITGAGDRSFSAGADLTSFGDISKAFKVWRFSRRSEEV
                     VSHLANFPKPTIAAINGHCFGGGLEIALACDFRIAASRAKLGQTEVNLGLVPGAGGSQ
                     RLVRVLGQAKAKELVFLGARLTADEAAGIGLVTKTVSNEAFAGEVRAFAEKLAKQAPI
                     AIRLAKVLLNRSGDTPIDAALEMEAMAFGLISSTEDIYEG"
BASE COUNT          257 a          548 c          529 g          311 t
ORIGIN      
        1 gtccttcgta gatgtcctcg gtcgaggaga tgagcccgaa cgccatcgcc tccatctcca
       61 gcgcggcatc gatcggagtg tcgccgctgc ggttcaagag gaccttcgcg aggcggatcg
      121 cgattggcgc ctgtttcgcg agtttctcgg cgaacgcgcg aacttccccc gcgaacgcct
      181 cgttcgacac ggttttcgtc acgaggccga tgcccgcggc ttcgtcggcc gtgagtcggg
      241 ccccgaggaa cacgagttcc ttcgccttcg cctgccccag gacgcggacg aggcgctgac
      301 tccctccggc cccgggcacc aggcccaggt tcacctccgt ctggccgagc ttcgcccgac
      361 tcgcggcgat ccggaaatcg catgcgagcg cgatctcgag gccgcctccg aagcagtgcc
      421 cattgatcgc ggcaatcgtc ggcttgggaa aattcgccag atggctgacg acctcctcgg
      481 accgccggga gaagcgccac accttgaacg ccttcgagat gtcgccgaac gacgtgaggt
      541 cggctccggc gctgaatgag cggtccccgg ctcccgtgat gatgacgcag cgcacgccgt
      601 cgtcatccgc gaatgcggag agcgccttgt cgagctcctc gaagacttcc gggctgagcg
      661 tgttgagtcg atccggtcgg ttgatcgtga tcgtcgccac gtgagtcgtc gcgtcgtggg
      721 cgacgagcag ggtctcgtac gtcatcgtgc tgcctcccga tccgtggtcg tagaatccct
      781 tccccgattt caccccgagg tggccgcggg ccaccatctc ctcgaggatc ttcgccggct
      841 tcgcgtcctt gtcggcgttc agcgcagcga ccacgacatc gatcccaagg tcgtcggccg
      901 tggcgagggg gcctttcgga aacgcggtcc cgagacgcat cgcctcgtcg atctcggagg
      961 gactcgcgac gtcgagcgcg acaagctcgg ccgcctcgtt aatcatcggc gcgaggatcc
     1021 ggatcggatc gaaggcctgg cccatctccg gcgtgagctt cggacggccc tccttgtagg
     1081 cgtagaagcc ttcgccgacc ttgtgcccca gcttcttccg gtcgatgagg tcctggaccg
     1141 accgtggcat gggccggtgt gcgttcacga tcagatgatg gaggacatcg acaccgacct
     1201 ggtcggcgag ttcgaacgga cccatcggga atccggcccg gaaccgcatc gcggcgtcga
     1261 tcgtctcgat cgggatgcct tcccgctcgt gaatccaggc ggcccgctcg aagtagggcc
     1321 cgaggacgcg cgtcgtgatg aatccgggga catctttctt gacgaccacg accgtcttgc
     1381 cgaacgactt cgcgagatcg accgcggcct gaagggtcgc gtcgctcgtc gtgtccgctc
     1441 ggatgacctc gacgagtgcc atgagcatcg gcgggttgaa gaaatgcatc ccgacgacct
     1501 tctgcggtcg cttcgtggcg gcggccatct ccgtgatcgg caacgcggac gtgttcgacg
     1561 cgaggatcgt tttcgccggc gcggcggcgt cgagctcgcg gaagactttc cttttcagtt
     1621 ccggatcctc gaagaccgcc tcaat
//
LOCUS       DATLMA010000396         1821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_702821, whole genome shotgun sequence.
ACCESSION   DATLMA010000396 DATLMA010000000
VERSION     DATLMA010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702821"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..522)
                     /locus_tag="VNA10_05095"
     CDS             complement(124..522)
                     /locus_tag="VNA10_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010916593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HVG37087.1"
                     /translation="MKGLPGRQTRGLPKGARLECIDNTGAKIVEIIEVMKYRGVRNRI
                     SSAGIADLIVVTVKKGTPETRKQVMNAVVVRQRRPFRRPEGMMVQFEDNACVIVTPEG
                     EVKGSDIKGPVAREAAERWPRVAATASMIV"
     gene            complement(519..920)
                     /locus_tag="VNA10_05100"
     CDS             complement(519..920)
                     /locus_tag="VNA10_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015505289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HVG37088.1"
                     /translation="MAEKKAQKKPATPVASIKPVGSAAVRDVGIDVPIPTTPCTDAKC
                     PFHGRLPVRGQMLEGVVVSAKMQNTVVIERQYLRFIRKYQRYEKRTHRMNVHAPPCLG
                     LQVGHRVLAMECRPLGKTVHFVVIHNQGVAG"
     gene            complement(927..1181)
                     /locus_tag="VNA10_05105"
     CDS             complement(927..1181)
                     /locus_tag="VNA10_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014867583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein subunit"
                     /protein_id="HVG37089.1"
                     /translation="MANLRKHELIGLRVEVVDASDPSQEHVRGRVVDETRNMLVVDVQ
                     GEEKRIPKHGSRFRFDVPGGFEVDGDEIRFRPEDRVKKAR"
     gene            complement(1181..1447)
                     /gene="rpmC"
                     /locus_tag="VNA10_05110"
     CDS             complement(1181..1447)
                     /gene="rpmC"
                     /locus_tag="VNA10_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HVG37090.1"
                     /translation="MALLRTKEIRAMDAETIAKKLTELRDELMHERGVAAMGGAPPNP
                     GKIRALRKNIARILTIMREEELAGGAGAPAKAPAAKSAPAGDET"
     gene            complement(1447..>1821)
                     /locus_tag="VNA10_05115"
     CDS             complement(1447..>1821)
                     /locus_tag="VNA10_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019847054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37091.1"
                     /translation="LGFASAKLKPGIIGVTVEIMDPRAKLPDEVEIKKPTAEYLAAAA
                     AAALEPVAPPEPIAEVATVAGAGGEDSVEEPEPLIIPEEPDPAKKVKKSKVATKRLKK
                     VAKQVSELGVDVDVGTEGGDET"
BASE COUNT          242 a          641 c          553 g          385 t
ORIGIN      
        1 cttcgacttg tcgtggattt ccggcgcgag atgagacgat gccatgatcc gtttcgtatg
       61 gagcggcgcg ttcgccgccc gtttccgctg ggtccggggt tgcgtactcg tcatcggcat
      121 tcctcacacg atcatgctcg cggtcgcggc gacccgcggc caccgttcgg cggcctcgcg
      181 agcgacgggg cctttgatgt ccgaaccttt cacctcgcct tccggcgtca cgatgacgca
      241 cgcgttgtcc tcaaactgga ccatcatgcc ctccggccgc cgaaacggtc ggcgctgacg
      301 gacgacgacc gcgttcatca cttgcttcct cgtctccggc gtccctttct tgaccgtgac
      361 gacgatcagg tccgcgatcc cggcgctcga gatccgattg cggaccccgc ggtacttcat
      421 gacctcgatg atctcgacga tcttcgcacc ggtgttgtcg atgcactcga ggcgcgcgcc
      481 tttcggcagg ccgcgcgtct gccgtccggg aagtcccttc aaccggcgac cccctggttg
      541 tggatgacga cgaaatgaac cgtctttccg agcggccggc attccatcgc gaggacgcga
      601 tggccgacct ggagtccgag gcacggcggc gcgtggacat tcatgcggtg cgtccgcttc
      661 tcgtaccgct ggtatttccg gatgaaccgg agatactggc gctcgatcac gaccgtgttc
      721 tgcatcttgg ccgagacgac gacgccttcg agcatctggc cgcgaacggg gaggcggccg
      781 tggaatggac acttcgcatc ggtgcagggc gtcgtcggga tgggaacgtc gatcccaacg
      841 tctcgcaccg cggcggagcc gaccggcttg atggatgcga ccggggtggc cggtttcttc
      901 tgcgctttct tttccgccat ctcgtttcac cgggccttct tcacgcggtc ttccggtcga
      961 aagcggatct cgtctccgtc gacttcgaat ccgccaggga catcgaaacg gaatcggctc
     1021 ccgtgcttcg ggatccgctt ttcctcccct tgcacgtcga ccacgagcat gttgcgggtc
     1081 tcatcgacga cgcgcccgcg gacatgctcc tggctcgggt cggacgcgtc gacgacctcc
     1141 acccgaaggc cgatcagctc gtgcttccgg aggttcgcca tcacgtctcg tctcccgccg
     1201 gcgcggactt cgcggccggg gctttcgccg gagcccccgc gcctccggcc agttcttctt
     1261 cacgcatgat cgtcaggatg cgcgcgatgt tcttgcggag cgcgcggatc ttgccggggt
     1321 tcggcggtgc gccacccatc gcggcgacgc ctcgttcgtg catcagctcg tcccgcagct
     1381 cggtgagctt cttcgcgatc gtctccgcgt ccatcgcgcg gatctccttt gtccggagga
     1441 gcgccattac gtctcgtcgc ctccttccgt ccccacgtcg acgtcgacgc cgagttcgct
     1501 cacctgtttg gcgaccttct tcagccgctt cgtcgcgacc ttgctcttct tgaccttctt
     1561 ggccggatcc ggctcctccg ggataatgag gggttcgggc tcttcgactg aatcctcgcc
     1621 accggctccc gcgacggtcg caacctcggc gatcggctcc ggcggcgcaa ccggttcgag
     1681 cgccgcggcc gccgcggcgg caagatactc ggccgtcggc ttcttgatct ccacctcgtc
     1741 cggcagcttc gcccgcggat ccatgatctc gaccgtgacg ccgatgatcc ccggcttcaa
     1801 cttcgcggac gcgaacccga g
//
LOCUS       DATLMA010000397         1127 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_766594, whole genome shotgun sequence.
ACCESSION   DATLMA010000397 DATLMA010000000
VERSION     DATLMA010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_766594"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VNA10_05120"
     CDS             complement(<1..231)
                     /locus_tag="VNA10_05120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37092.1"
                     /translation="MEGLVATHGRLTLVIVGLIALVALTSAPIRASGPPVLPNPSQWP
                     SHSSIRINADSDFTPANGVIGGDGTAGNPYEIA"
     gene            complement(404..952)
                     /locus_tag="VNA10_05125"
     CDS             complement(404..952)
                     /locus_tag="VNA10_05125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37093.1"
                     /translation="MEGRGSLRAIAHLWKAPRVLLLVGGVLFLSGQALLAASFLQGTQ
                     GTVATIPPGPSWFYVYQIKVIGSSRMSGQFAALAGDVVNLYVFGEKQYELYAFIGWGN
                     GLFSLNGSSGSFAIDLPSSGTYFLVLAHGPGSENSAQNVRVSYRVAGIEPEFITVGSG
                     LIAPGIALVGLGLWWRDRRREG"
BASE COUNT          237 a          361 c          347 g          182 t
ORIGIN      
        1 ggcgatttcg tacgggttgc cggccgtgcc gtccccgccg attacgccat ttgccggcgt
       61 gaagtccgaa tcggcgttaa tgcgaatcga actatgggat ggccattgcg aggggttggg
      121 cagtaccgga ggtcccgaag cccggatcgg agcagaggtc agggcgacga gggcgatcag
      181 acctacgatg accagagtta accggccgtg ggtcgcgaca agcccctcca tgaatgcgat
      241 gggagtgacg acatatcatc tttcggggcg ctggacaacc tcgaagttcg cgaacttccc
      301 atatgaccgt gactgccgca gcccgctacg cgatcgtccg gtcggcggcg agatctcgac
      361 tggagagcct cggcggatac gaggcctcaa gccacccccg ctctcatcct tctcgccgtc
      421 ggtctcgcca ccacagcccg aggccgacca gcgcgatccc cggggcgatg agcccggacc
      481 cgacggtgat gaactcaggc tcgatccccg cgacgcgata cgacacccgg acgttctgcg
      541 ccgaattctc ggatccgggg ccgtgcgcga ggacgagaaa ataagtgccg gaactcggga
      601 gatcgatcgc gaaggaaccg gaggagccgt tgagcgaaaa caggccattg ccccacccga
      661 tgaacgcata cagttcgtat tgtttctcgc cgaagacgta caggttcacg acgtcgcccg
      721 cgagcgccgc gaactgcccg gacatgcggc tgctgccaat caccttgatc tggtacacgt
      781 agaaccacga aggacccgga ggaatcgtcg cgaccgtccc ctgcgtccct tgcaagaatg
      841 aagccgcgag gagcgcttgt ccggagagaa acagcacgcc accgacgagg aggaggaccc
      901 gcggcgcctt ccagagatgc gcaatcgctc ggaggctgcc tctcccctcc accgccccgc
      961 tcccgtaggg gaatcggcgt gaggctattt ctccgttcgc aacgcacgtc ggacgatctt
     1021 ccgagcgaac cgaaaatcgt tttcacatta ggcggctgac aaaaaccggt ccagagacac
     1081 catatacacc tccgatgaac tcgtaacccg gagggcctgt gggcgtg
//
LOCUS       DATLMA010000398         1646 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_161840, whole genome shotgun sequence.
ACCESSION   DATLMA010000398 DATLMA010000000
VERSION     DATLMA010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161840"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VNA10_05130"
     CDS             <1..335
                     /locus_tag="VNA10_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37094.1"
                     /translation="PMLEFAEPDETGYRPRPFELGGPGELTTLLAGAGFVETQEERRT
                     HTMAFKDEAEYIEILVEGTPLGRSIKEEDPSVQKKILAGTRANLRKWKSRKGIQIPCE
                     GVIVTATK"
     gene            complement(339..>1646)
                     /locus_tag="VNA10_05135"
     CDS             complement(339..>1646)
                     /locus_tag="VNA10_05135"
                     /inference="COORDINATES: protein motif:HMM:NF013481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HVG37095.1"
                     /translation="EETREKLKAAGRALCIGQAGENLVRFAGIALEERMAARGGLGAV
                     LGAKRLKAITVFGTMDFPGLSGEPIKVFHKKTLAQNKDRSAYFHEQGTMEIPPKVNEA
                     NLWPTHNWQDVKWEVGEQLYFPKFLNILTGYTTCFDCSIRCTRTNSSRYGDSGRGPEY
                     ETTWAFGPQVMNDDPHIVVHANKLCDQYGLDTISTGGILGFYRECIERGLVDDEWPTN
                     EKMFDLIDAIVHRRGIGDVLAEGTLRASQVFDGQSQDFAIQQCGMDLPAYDPRGSFGM
                     FLCYVFGPRHGCHNKAWTVYMELGMSLDGRTTPEGKPKLVSDLLDETAVIDSIGICTL
                     VTPIVFTETPEAYQTVLGKEVTEEDMRRIGRGISDLERTLDIGRGHTKEKDTLPRRLI
                     DGEVDVNGKRVRLGEETWDRLRDEYYRYRGWSADGVPAPGFAR"
BASE COUNT          277 a          542 c          518 g          309 t
ORIGIN      
        1 cgccgatgct ggagttcgcc gagcccgacg agaccggcta tcgacccagg ccgttcgaac
       61 tcggaggccc cggtgaactg acgacgctgc tcgccggcgc gggattcgtg gaaacacagg
      121 aggagcggcg aacccacacg atggccttca aggacgaagc cgaatacatc gagatcctgg
      181 tcgagggaac gccgctcggt cgttcgatca aggaagaaga cccctcggtc cagaaaaaaa
      241 tcctcgcggg tacgcgggcg aaccttcgta aatggaagtc acgcaagggc attcaaattc
      301 cgtgcgaagg cgtgatcgtg acggcgacga agtgaagctc accgagcgaa tccgggggct
      361 ggcacgccgt ccgcggacca gcctcggtac cgatagtatt cgtccctcag ccgatcccac
      421 gtttcctcgc cgagtctcac ccgctttccg ttgacgtcga cctcaccgtc gatgagccgc
      481 cgcgggagcg tgtccttctc cttcgtgtgt ccgcgtccga tatccagggt tcgctccagg
      541 tcgctgatcc cgcggccgat gcgccgcatg tcctcctccg tgacctcctt cccgaggacc
      601 gtctggtagg cttccggtgt ctccgtgaag acgatcggcg tgacgagcgt gcagatgcca
      661 atcgaatcaa tcactgcggt ctcgtccagg aggtccgaca cgagcttcgg cttgccctcc
      721 ggagtggtgc gtccgtcgag gctcatcccg agctccatgt agacggtcca cgccttgttg
      781 tggcagccgt gcctcgggcc gaagacgtag cacaggaaca tcccgaacga gccgcgcgga
      841 tcgtaggcgg gaaggtccat cccgcactgc tggatcgcga agtcctgcga ctggccgtcg
      901 aacacctggc tcgcgcgaag ggtgccttcc gcgaggacgt cgccgatccc ccgccggtgc
      961 acgatcgcat cgatgaggtc gaacatcttc tcgttcgtcg gccattcatc gtcgacgagg
     1021 ccgcgttcga tgcactcgcg gtagaagccg aggatcccgc cggtcgagat cgtgtcgagg
     1081 ccgtactggt cgcacagctt gttggcgtgc accacgatgt gcgggtcgtc gttcatcacc
     1141 tggggtccga aggcccacgt ggtctcgtac tccgggccgc ggccggagtc gccgtagcgg
     1201 gagctgttcg tccgggtgca gcggatcgaa cagtcgaagc acgtcgtgta gcccgtgagg
     1261 atgttcagga atttcgggaa gtacaactgt tcgccgacct cccacttcac gtcttgccag
     1321 ttgtgggtcg gccagaggtt cgcctcattc accttcggcg gaatctccat cgtcccctgc
     1381 tcgtggaagt aggcgctgcg atccttgttc tgcgcgagcg tcttcttgtg gaacaccttg
     1441 atcggctcgc cgctgaggcc ggggaaatcc atcgtgccga acaccgtgat cgccttgagc
     1501 cgcttcgcgc cgaggaccgc gccgaggcca ccgcgggcgg ccatccgttc ctcgagtgcg
     1561 atgcccgcga accgcacgag gttctcgccc gcctgaccga tgcagagcgc ccggccggcg
     1621 gccttcagct tctcgcgcgt ctcctc
//
LOCUS       DATLMA010000399         1046 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_281532, whole genome shotgun sequence.
ACCESSION   DATLMA010000399 DATLMA010000000
VERSION     DATLMA010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281532"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..843
                     /locus_tag="VNA10_05140"
     CDS             70..843
                     /locus_tag="VNA10_05140"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HVG37096.1"
                     /translation="MPIKLEGGCFVTGLKEGEPEGGEGVRIWRHIHRGAGAQSLSMRV
                     LEFPSGKSGPLRNSRCDEVLYVVEGVGTLILDGRPFEIEPDFGIYVRPGTSFSVLKHS
                     ADPITLVSSQCPDPGPTSGRREIEGIAPDGPDSAGNPVVRLRDRVSETTGDRWYRVLV
                     DRELGCHQSTQFVGSIPPGRAPDHFHHYEEALCILAGTGRMWSGDSSAPIQAGSCVFL
                     PRGQIHCVENTGNGELRLLGVFHPAGSPAVRYSADERDG"
BASE COUNT          176 a          335 c          342 g          193 t
ORIGIN      
        1 gccacagctt tcatcctcgc gcgccgacca tagcccccgc gccggcgctt gtcaggcggg
       61 gaggtcgcaa tgccgatcaa gctcgagggt ggttgtttcg tgactggcct caaggagggc
      121 gagccggagg gtggtgaggg cgtccgcatc tggcgccaca ttcaccgggg cgccggcgcg
      181 cagtccctct cgatgcgagt gctcgagttt ccttcgggca agtccggtcc acttcgcaat
      241 tcgcgctgcg acgaagtgct ctacgtggtc gaaggggtgg gaacgttgat tctcgacggc
      301 cgtccattcg agatcgagcc ggacttcggc atctacgtgc ggcccggcac gtcattctcg
      361 gtcctgaagc actccgccga tccgatcacc ctcgtgagct cgcagtgccc ggatccgggg
      421 ccaacgtccg gacgtcggga gatcgaaggc atcgcgccag acggcccgga ttcggcggga
      481 aatccggtcg tccggcttcg cgaccgcgtc tcggaaacca ccggggatcg ctggtaccgc
      541 gttctcgtcg accgagagct aggctgccac cagtcgacgc agttcgtcgg cagcattccc
      601 cccgggcgcg ctccggacca tttccatcac tacgaagagg cgctctgcat cctggcggga
      661 accgggcgaa tgtggtcagg agactcaagc gcgccgattc aggccggctc gtgcgttttt
      721 ctgccgcgcg ggcaaattca ctgcgtcgag aacaccggaa acggagagct gcgccttctc
      781 ggtgtgttcc acccggccgg aagccccgcg gtccgctatt ccgccgacga acgcgacggg
      841 taaccgccgg accggatcag gccagttcga gtgccgccct cgccaggtat cctggtagtc
      901 gtgcgcactt cggccggatg ggtgagtttg tgacaaatct tccgtgtaac gaacctgctc
      961 gacaagggtc cccccctcat ggagctgtca actgaggaga caacagaatg aagaaagtgt
     1021 tcgccgtcgt gatcgcggtg tggttg
//
LOCUS       DATLMA010000400         1149 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_97715, whole genome shotgun sequence.
ACCESSION   DATLMA010000400 DATLMA010000000
VERSION     DATLMA010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97715"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..>1149
                     /locus_tag="VNA10_05145"
     CDS             166..>1149
                     /locus_tag="VNA10_05145"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008514843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HVG37097.1"
                     /translation="MAKVKETLNPFEIAREQIDRAGKKLNLDSGLLEVLKSPRRELTV
                     HFPVKMDNGRVKVFTGFRVQYNDAIGPFKGGIRYHWNVSLDEVRALSCWMTWKCAVMG
                     IPYGGAKGGVICNPKEMSKDELERMTRRYASEISIIIGPEKDIPAPDVYTDSQTMAWI
                     MDTISMTKGFAQPGVVTGKPLVIGGSLGRDEATSRGMMYATREAGKKVKLNLKGASVA
                     VQGFGNVGSHYARLMHDEQGSKIVAVSDSKGGIYSEKGFDPKEVLAFKAKTGSVVGFP
                     GTREITNEALMELDVDIVAPCALEGILTSENAPRIKGKIVAEGANGPTTPEA"
BASE COUNT          248 a          342 c          387 g          172 t
ORIGIN      
        1 gtcgatccgt ccgactatct gaagcagggc catccaacgg actcgtggga cagcggttga
       61 gcccctggga atcgccaacc ggaacttcga acacaatctt taaaagcgga cggctctact
      121 cgcggccacc ttcgacatcc gtcggatgtt cgggaggcgt gtggcatggc gaaagtgaag
      181 gaaacgctga atcctttcga gatcgcccgg gagcagatcg accgggccgg caagaagttg
      241 aacttggact ccgggctcct cgaggtcttg aagagcccgc gccgcgagct cacggtgcac
      301 ttccccgtga agatggacaa cgggagggtg aaggtcttca cgggcttccg cgtgcaatac
      361 aacgacgcga tcggcccatt caagggcggc atccggtacc actggaacgt ctccctcgac
      421 gaggtccgcg ccttgtcatg ctggatgacc tggaagtgcg cggtcatggg catcccgtac
      481 ggcggcgcga aaggcggggt gatctgcaac ccgaaggaga tgtcgaagga cgagctcgag
      541 cgcatgacgc gccgctatgc gtccgagatc tcgatcatca tcggcccgga gaaagacatc
      601 cccgcgccgg acgtgtacac ggacagccag acgatggcgt ggatcatgga cacgatctcg
      661 atgaccaaag ggttcgccca gcccggggtc gtcaccggga aacccctcgt catcggcggt
      721 tcgctcggcc gggacgaggc gacgtcgcgg ggcatgatgt acgccacccg cgaggccggc
      781 aagaaagtca agctgaacct gaaaggcgcg agcgtcgcgg tccagggatt cgggaacgtc
      841 ggatcccact acgcccggtt gatgcacgac gagcaaggct cgaagatcgt ggcggtctcc
      901 gactcgaagg gcggcatcta cagcgagaaa ggcttcgacc cgaaagaggt cctcgcgttc
      961 aaggcgaaga ccgggagcgt cgtcggattc ccgggaacgc gggagatcac gaacgaggcg
     1021 ctcatggagc tcgacgtcga catcgtcgcc ccgtgcgctc tcgaaggcat cctgacgtcg
     1081 gagaacgcgc cccggatcaa gggaaagatc gtggcggaag gggcgaacgg accgacgacg
     1141 cccgaggcg
//
LOCUS       DATLMA010000401         3675 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_219830, whole genome shotgun sequence.
ACCESSION   DATLMA010000401 DATLMA010000000
VERSION     DATLMA010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3675
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219830"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1235)
                     /locus_tag="VNA10_05150"
     CDS             complement(<1..1235)
                     /locus_tag="VNA10_05150"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HVG37098.1"
                     /translation="MANSFREDSEGVASTVATLFALLCAVLFIQAAVISVIPAREYAA
                     ERTTSVQALQALDYIRYAAVGAAVPGGQFSVTIPLGTPASSAFSTASDGTLAFNTGSV
                     APANISLAYVPTIHDSRITKVDQDIILAIDSSGSMNQNDPGRLRIQAAKDYIGRLSRP
                     DRVASVDFDSAAHLTLANIGGPTHHLFSTYNNGVPDYSGAQTDLNSIDQSGSTNFGAA
                     LFVANNELITFGVRGKAWVIILLTDGQNTCCPNQAAGDAQARLEAARAKANNITVFTI
                     GLGPDADAALLQEIATTTGGTYYAAPTADAIKFIYLEIANHYSGSVACGTITTASSVS
                     GSLTLFRGNHQYPVQTMSLEAGGVTLSQPGGATIHQGIPFEYTPRDLGTGSLRVTLIT
                     FVGAPFQAAGSDYAFINAQ"
     gene            1515..2972
                     /locus_tag="VNA10_05155"
     CDS             1515..2972
                     /locus_tag="VNA10_05155"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HVG37099.1"
                     /translation="MPAQREGRRTGAPAKLNTFDVTSLVVGSIIGADVYIATAIGARL
                     VGPSSLLAWILAGAMAMVIALSFSYCVMILPKVGGPYAYVRAVAGPFPGFLVGWSLLL
                     AEWFSLAVFPVAFTQYFVALDPGINDLGKVLLKAVFIAIILVTNLVGVKAAGRVNDVL
                     TIAKLSPLVLIVLGGLAFITLQPGRFVSNSLPFFTGDLAAFGQALVLIFWAYAGFELS
                     TLPTDEVIEPRKTIPRAIVTGMMIVIAFYFLTNFVVIGSVGGSALGASASPLIDAARA
                     TFSSPALLTSVIALVVGVGALLSITGADESGTVGTSRLAYAMSIDGLLPHVFSRKQKR
                     FHTPYLGLIILCVPAYVASLLGGLSDLINSAVFLLAFVYFATCFATIFLERKHPRISS
                     GLRGKISIPVAGMIFSVVLMGLVSPRLIGISLILLAVGVPVYVFFSPRTELVELKEAF
                     LSADAISRRAYQQGQRFLAYPLRLIKRLWRRRSPS"
     gene            complement(2969..>3675)
                     /locus_tag="VNA10_05160"
     CDS             complement(2969..>3675)
                     /locus_tag="VNA10_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG37100.1"
                     /translation="PKRTFLQMLEPDQLPAEFRRSVGAIKMHGAAMKVNCALSELPRW
                     NAADATPGPQHRGSTYIGPSIEYVEDAFLDAKYGRPSEHPWLEVVTQSVLDPSVAPRG
                     KHTLSIYVQYSPYHLASGSWDELKEPYGDRVVETLAEYAPNVPKAILARDVVTPLDLE
                     RRFGLTEAHQSHGEMGPDQFFSFRPVPGWSNYRTPVPGLYLCGAGTHPGGGVSGAPGY
                     NGAHAVLEDWASLKAA"
BASE COUNT          556 a         1185 c         1214 g          720 t
ORIGIN      
        1 aattgagcgt tgatgaacgc gtagtccgag cccgcggcct ggaacggcgc gccgacaaac
       61 gtgatgagcg ttacgcggag gctgcccgtc cccaggtcgc gcggcgtata ctcgaacggg
      121 atcccctggt ggatggtggc cccgccgggc tgggacagcg tgacgccgcc cgcctcgagg
      181 ctcatcgtct ggaccgggta ctggtggttc cctcggaata gggtcaaaga gccgctcacg
      241 gagcttgccg tcgtgatcgt gccgcacgcg acggatccgg agtagtggtt cgcgatctcc
      301 aggtagatga acttgatcgc atccgccgtc ggcgctgcgt agtaggtccc gcccgtggtc
      361 gtcgcaatct cctgcaggag cgctgcatcc gcatcgggcc cgagtccgat cgtgaagacc
      421 gtgatgttgt tcgccttcgc ccgggccgct tcgagtcggg cctgcgcgtc gccggctgcc
      481 tggttcgggc aacacgtgtt ctggccgtcc gtcaggagga tgatcaccca ggccttgcct
      541 cggaccccga acgtgatgag ctcgttgttc gcgacgaaga gcgcggcccc gaagttcgtg
      601 ctcccgctct ggtcgatcga gttgaggtcc gtctgcgctc cgctgtaatc cgggaccccg
      661 ttgttgtacg tggagaacag gtggtgtgtc gggccgccga tgttcgccaa cgtgagatgg
      721 gcggcgctgt cgaagtcgac gctcgcgacg cggtccggtc ggctgagacg gccgatgtag
      781 tccttcgcgg cctggatccg caaccggccc ggatcgttct ggttcatcga accggagctg
      841 tcgatggcca agatgatgtc ctggtccacc ttcgtgattc gactgtcatg gatcgtgggg
      901 acgtacgcca gggagatgtt cgcgggcgcc acgctccctg tgttgaacgc gagggtgcca
      961 tcgctggcgg tcgagaaggc cgacgaggcc ggggtgccga gcgggatggt gacggagaat
     1021 tgccctccgg ggaccgcggc gccgaccgcc gcataccgaa tgtagtcgag ggcctggagc
     1081 gcctggaccg aggtcgtgcg ctcggcggcg tattcccgcg cggggatcac ggagatgacg
     1141 gccgcctgga tgaacagcac ggcgcacagc agtgcaaaga gagtcgcgac tgtggacgcg
     1201 actccttccg agtcctctcg gaacgagttc gccattgaga acggctgacc acgggaagcc
     1261 cgctttaaat acttggttcg ttcaaaatct ttcgtgataa ccagccggcg gaaccggtcc
     1321 gggaatcgat ttcaggaacg ccgcgcgatg acgtgcctgg agggctgcgg ctcccgcagc
     1381 ggatgtcgct cagccgcggg cccgtccgca taggacaatc gtcgaccggg cgttggttcc
     1441 ttcgcgacca cctgtggcgc cccccgcccc gggtcccaca attcagtatt tagacccgaa
     1501 gcgattgccg cgtgatgccg gcgcaaaggg aaggcaggag gaccggcgct ccggcgaaac
     1561 tcaacacgtt cgacgtcacg agtctcgtcg tcggatcgat catcggggcc gacgtgtaca
     1621 tcgcgaccgc gatcggcgcg cgactcgtcg gtccctcgtc gctgttggca tggatcctag
     1681 cgggcgcgat ggcgatggtc atcgccctgt ccttctccta ctgcgtcatg atcctgccga
     1741 aagtcggcgg accctacgcc tacgtgagag cggtcgccgg tcccttcccc ggattcctcg
     1801 tcggttggag cctcctgctt gcggagtggt tctccctcgc ggtcttcccg gtcgccttca
     1861 cccaatactt cgtcgcgctc gatccgggca tcaacgacct cggcaaggtc ctcctgaaag
     1921 cggtgttcat cgcaatcatc ctcgtcacga acctggtcgg ggtcaaggca gcggggcggg
     1981 tgaacgacgt cctgacgatc gcgaagttgt cgccgctcgt cctcatcgtc ctcggtggcc
     2041 tggccttcat cacgcttcag ccgggacgat tcgtgtcgaa ctccctcccg tttttcaccg
     2101 gtgacctcgc ggcgttcggc caggccctcg tcctgatctt ctgggcctac gcgggattcg
     2161 aactctcgac cttgccgacg gatgaggtga tcgagccgcg gaagacgatc ccgagagcca
     2221 tcgtcaccgg catgatgatc gtgatcgcct tctacttcct cacgaacttc gtcgtcatcg
     2281 gttcggtcgg cggaagtgcc ctcggggcgt cggcgagtcc gctcatcgat gctgcgcgcg
     2341 cgaccttcag ctcgcccgcg ctcttgacct cggtgatcgc gctcgtcgtc ggcgtcggcg
     2401 cgttgctgtc catcaccggg gccgatgaat ccgggacggt cggcacatcg cgcttggcgt
     2461 acgcgatgtc gatcgacggc ctcctcccgc acgtgttcag ccgcaagcag aagcggtttc
     2521 acacgccgta cctcgggctc atcatcctgt gcgtcccggc ctacgtcgcg agtcttctcg
     2581 gcggcctgtc cgacctgatc aactcggccg tcttcttgct cgcgttcgtc tactttgcga
     2641 cgtgcttcgc gacgatcttc ctggaacgga agcatccacg gatctcgagc gggctccgcg
     2701 ggaagatctc catcccggtc gccgggatga tcttctccgt cgtcctcatg ggtctcgtct
     2761 cgccccggtt gatcgggatt tcgctcatcc tcctcgcggt cggcgtcccg gtctacgtgt
     2821 tcttctcccc acggacggag ctcgtcgaac tgaaggaagc gttcctgtcg gcggacgcga
     2881 tctcgcggag ggcctaccag caagggcagc ggttcctggc ctatccgttg cgactgatca
     2941 agcggctctg gcggaggcgt tcccccagct aagcggcctt gaggctcgcc cagtcctcga
     3001 ggaccgcgtg ggcgccgttg tatccgggag cgccgctcac gccgcctccg ggatgggtgc
     3061 cggcgccgca caggtagagc cccgggacgg gcgtgcggta gttcgaccat ccgggaaccg
     3121 ggcggaagga gaagaactgg tccggcccca tttccccatg tgactggtgc gcctcggtca
     3181 gcccgaaccg gcgctcgagg tcaagaggcg tgaccacgtc ccgggcgagg atcgccttcg
     3241 gcacgttcgg ggcgtactcc gcgagggtct cgacgacgcg gtccccgtac ggttccttga
     3301 gttcgtccca ggaacccgat gccaggtgat acgggctgta ctgcacgtag atcgagagcg
     3361 tgtgtttgcc gcgcggcgcg acggacggat cgaggacgct ctgcgtgacg acctcgagcc
     3421 acggatgctc ggagggccgt ccgtacttcg catcgaggaa agcatcctcg acgtactcga
     3481 tcgacggtcc gatgtaggtg cttccccgat gttgcggacc cggggtcgcg tcggcagcgt
     3541 tccaacgagg gagctctgaa agggcgcagt tgaccttcat cgcggccccg tgcatcttga
     3601 tcgcgccgac ggaccgccgg aattccgcgg gtagttggtc gggttccagc atctggagga
     3661 acgtgcgctt cggat
//
LOCUS       DATLMA010000402         1784 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_404897, whole genome shotgun sequence.
ACCESSION   DATLMA010000402 DATLMA010000000
VERSION     DATLMA010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404897"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1020)
                     /locus_tag="VNA10_05165"
     CDS             complement(<1..1020)
                     /locus_tag="VNA10_05165"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG37101.1"
                     /translation="MDRTDGSHWFYSYLPQGVAGGATSTLIPLFAYALGGSLLTVGII
                     AAATSLASVPAFILWGSLSDRTARRKVFLLIGFLGSGIALFAMALCGTMSQFYLANLL
                     AGFLGAASGPAGTVLLMETSKRTEWPARLALVSRIGAIGWVAGLGLGIAWLAIGPGLL
                     SAEVSSMRALFVIGAALGLLSGLLVQIWTREPAVRVDRRDVHLADVHARIERGRYLPI
                     RILHFINPLDWRRKVRLPRALRMYLVCVFLLFGGFTAFYGFFPIFLKQSYGLGSPEIF
                     AVYIASQATSIAVYPRVGRWVAARGDRSTQLYAAMGRSMLFPSFLLVGIAALPYGARL
                     GAAIAL"
     gene            complement(1085..>1784)
                     /locus_tag="VNA10_05170"
     CDS             complement(1085..>1784)
                     /locus_tag="VNA10_05170"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HVG37102.1"
                     /translation="STGVADKDLAVPISLTLTIATATSSVINHHRRGLVDFRLGGVLL
                     TGALIGAVVGTVFTLKVLNQETFEAFFAAVLIVFGLYMVRDWVKNARSVDEDDDAALT
                     PPRVGGTAAATAGSGFLSGSMGIGGGLLNVPLLVYVLGRKTRKAIGTSSLLIIPTAAV
                     GFAAYVVDLALRPGGFTWPAEFVLIPIMMPIVFVGAYLGSRWGLEKLRTRSVALLFII
                     VLFIAAAKLVFDLL"
BASE COUNT          390 a          580 c          582 g          232 t
ORIGIN      
        1 gagcgcgatg gcggcaccga gacgcgcacc gtaaggcagg gccgcgatcc cgacgagtag
       61 gaacgatggg aacagcatcg atcggcccat ggccgcatac aactgcgtcg accgatcacc
      121 gcgagccgcg acccatcggc cgacgcgcgg atacacggcg atcgaggttg cctgactcgc
      181 gatgtatact gcgaagatct cgggactccc gagcccgtac gactgtttca ggaaaatcgg
      241 gaagaacccg tagaacgctg tgaatccgcc gaacaagagg aagacgcaga caagatacat
      301 ccgcagcgcg cgcgggagtc gcaccttccg tcgccagtcg agcgggttga tgaagtggag
      361 aatccgaatc ggcagatacc ggcctcgctc gatgcgtgca tggacgtcgg cgaggtgaac
      421 atcccggcga tccacgcgga ccgccggttc ccgagtccag atttgaacga ggagaccgga
      481 cagcaggccg agcgcggcgc cgatcacgaa gagcgcgcgc atcgatgaca cctccgcgct
      541 gaggagcccc ggcccgatgg cgagccaggc gatcccgagg cccaaaccgg caacccaccc
      601 gatcgctccg atccgactca cgagggcgag ccgagcgggc cattccgtac gcttcgaggt
      661 ctccatgagg aggaccgtcc cggcagggcc actcgcggcg cccaagaaac ccgcgaggag
      721 attcgcgagg tagaactgag acatggtccc gcacagggcc atcgcaaaga gggcgatccc
      781 gctcccgagg aaaccgatca ggaggaagac cttgcggcgc gcggtgcgat cggagagcga
      841 tccccagagg atgaaggcgg ggaccgacgc gaggctcgtg gcggccgcga tgatcccgac
      901 ggtgaggagc gagcctccga gcgcgtaggc gaacagggga atcaaagtcg acgtcgcgcc
      961 cccggcgacg ccttgcggga ggtatgaata gaaccagtga gacccgtccg tccggtccat
     1021 cccatccctt cggctcaggt gaggcggcgc acccgcggcg acgtataagg cctttcctcc
     1081 gcgatcacag gaggtcgaag acgagcttcg cggcggcgat gaacaacacg atgatgaaga
     1141 ggagcgcgac cgatcgagtc ctcaacttct cgaggcccca ccgcgatccg aggtacgcgc
     1201 cgacgaagac gatcggcatc atgatcggga tcaggacgaa ctccgcgggc caagtgaaac
     1261 ctccggggcg gagtgccaag tcgaccacgt acgcggcgaa accgaccgcc gccgtcggga
     1321 tgatcaacag cgacgacgtc ccgatcgcct tccgagtttt tcggccgagg acatagacga
     1381 ggagcgggac gttcagcaag ccgccgccga tccccatgct cccggacaag aagccggacc
     1441 ctgccgtcgc ggctgccgtt ccgccgacgc gtggcggcgt caacgcggcg tcatcgtcct
     1501 catcgacgga gcgggcgttc ttcacccagt ctcggaccat atacagaccg aacacgatca
     1561 gcacggccgc gaagaacgcc tcgaacgttt cctgattcag caccttcagc gtgaacacgg
     1621 tccctacgac cgctccgatg agcgcgcccg tcaggagcac gccgccgagg cggaagtcca
     1681 cgagtccgcg ccggtgatga ttaattacag acgaagtcgc ggtcgcaatc gtcagcgtga
     1741 gggaaatcgg caccgccaaa tccttgtcgg ccacgccggt ggac
//
LOCUS       DATLMA010000403         1285 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_281644, whole genome shotgun sequence.
ACCESSION   DATLMA010000403 DATLMA010000000
VERSION     DATLMA010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281644"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..484)
                     /locus_tag="VNA10_05175"
     CDS             complement(86..484)
                     /locus_tag="VNA10_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012032532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HVG37103.1"
                     /translation="MGKKIRVLIAKPGLDGHDRGAKVVARALRDAGMEVIYTGLRQTP
                     EDIVEAAIQEDVDAIGLSSLSGAHMTLFPEVVRLLKKRKSGDIVVVGGGIIPEDDVPK
                     LKRAGVKAVFGPGTPLSVIVSFFEKAYKGA"
     gene            complement(494..>1285)
                     /locus_tag="VNA10_05180"
     CDS             complement(494..>1285)
                     /locus_tag="VNA10_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014789400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HVG37104.1"
                     /translation="ELAKYRAARRIWAREMRDTFGAKNPRSWLLRFHTQTAGVSLTAQ
                     QPEINIVRTTIQALAAVLGGTQSLHTNAYDEAYQVPNEKAARIALRTQQILAHESGAA
                     NTVDPFGGSYFLEALTDELEEDAYRTFDLIQDLGGVIPAIRKGFFQQEIANSAYRYQR
                     EVEDKERTIVGVNDFVVDEQTEVEPLRVSEASFKAQVERLRKLRRTRDGKKHTRALER
                     LRKACEGDDNTMPFILDAVRAKATLGEICDVMREVFGVWEEPLLY"
BASE COUNT          192 a          442 c          402 g          249 t
ORIGIN      
        1 tttcccgccg accgcttgtc ccctttgaga agcgagtcga cgagacctcg gacagagtcg
       61 cgcgaacctt tcgccggcac ggggctcacg cacctttgta cgccttctcg aagaacgaga
      121 cgatcacgct cagtggcgtg ccgggtccga agaccgcctt gaccccggcc cgtttcagct
      181 tcggcacgtc gtcctccggg atgatgccgc caccgaccac gacgatgtct ccggatttcc
      241 gtttcttcag gaggcggacg acttccggga acaaggtcat gtgcgcgccg cttaaggagg
      301 aaaggccgat cgcgtcgacg tcctcctgga tggcagcctc gacgatgtcc tccggcgtct
      361 ggcgcaggcc ggtgtagatc acctccatgc cggcgtctcg cagggcccgg gcgacgacct
      421 tcgcccctcg gtcatgtcca tcgaggccgg gcttggcgat caggacgcgg atcttcttcc
      481 cgatcggacc acctcagtag aggaggggct cctcccagac gccgaacacc tcgcgcatca
      541 cgtcgcagat ctcgcccagc gtcgctttcg cccgcacggc atcgaggatg aacggcatcg
      601 tgttgtcgtc gccctcgcac gccttgcgca gacgctcgag cgctctggtg tgcttcttcc
      661 cgtccctcgt ccggcggagc ttccgaagcc gctcgacctg ggccttgaac gaggcttcgc
      721 tcacgcggag cggctccacc tcggtctgct cgtcgacgac gaaatcgttg acgccgacga
      781 tcgtgcgctc cttgtcctcg acctcccgct ggtagcggta cgccgagttc gcgatctcct
      841 gctggaagaa tcccttccgg atggcgggga tcacgccacc gaggtcctgg atcaggtcga
      901 aggtgcgata cgcatcctcc tcgagttcgt ccgtcagcgc ctcgaggaag tacgagccgc
      961 cgaacgggtc gacggtgttt gcagccccgc tctcgtgggc gaggatctgc tgggtccgca
     1021 acgcaatccg cgcggccttc tcgttcggga cctggtatgc ctcatcgtac gcgttcgtgt
     1081 gaagggactg cgttccgccg aggaccgccg caagcgcctg gatcgtggtc cggacgatgt
     1141 tgatctccgg ctgctgggcc gtgaggctca ctcccgcggt ctgggtgtgg aaccgcaaca
     1201 gccacgatcg cggattcttc gcgccgaagg tgtcgcgcat ctcgcgcgcc cagatgcgtc
     1261 gcgccgctcg gtacttggcg agctc
//
LOCUS       DATLMA010000404         2144 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_97846, whole genome shotgun sequence.
ACCESSION   DATLMA010000404 DATLMA010000000
VERSION     DATLMA010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97846"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VNA10_05185"
     CDS             complement(<1..693)
                     /locus_tag="VNA10_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013457550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HVG37105.1"
                     /translation="MVVSSATIDSLLKEKEEYPPPKSFRKDAWVHDPKVPREAAADPE
                     RYWANQAKELVWIKKWSKVLEWKPPFAKWFVGGQINVSQNCLDRHLDSPRRNKAAIVW
                     EGEPGDRRVLTYQMVWREVNRFANVLKRLGVKRGDRVTIYLPAIPELPIAMLACARIG
                     AIHSVIFAGFSAKAIQDRAEDCHSEVIITADVGYRRGNVVPLKNTVDEAVEDLPFVRH
                     VVVCQRTKEPVSM"
     gene            875..1300
                     /locus_tag="VNA10_05190"
     CDS             875..1300
                     /locus_tag="VNA10_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37106.1"
                     /translation="MASTQLSRSPLTAEDASIPILILLSLHVGLFLLIAGALFPTDVE
                     MSIFSPGLKVESFLFLFAVLYLLLGLMGVVSSYGRRFGLVLSAVAVPFLVFLLAAARA
                     GDVSLTRSGWFLALSLLDSLAIVIALLLPRIIGHSPHPP"
     gene            complement(1446..>2144)
                     /locus_tag="VNA10_05195"
     CDS             complement(1446..>2144)
                     /locus_tag="VNA10_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014808379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HVG37107.1"
                     /translation="FDPGGFAEFVRVPAINVKHGVFPLPREIPDDEATFVEPLACVIR
                     GQRLAGFRPGGTMLVLGSGVAGLLHIKLAKAAGAAKVIATDVVEFRKAAARKAGADVV
                     IDGREDVPMRVKEVNEGNLADLVITCTGAPKAIAQGLASVDRGGTVLFFAPIDPAAKV
                     DIPFNELWREEITLTSSYGGSPRDIRESVNLLREKRLFVTDLITHVLPLGKAAEGFRL
                     VAEARDSIKVVLRP"
BASE COUNT          373 a          715 c          598 g          458 t
ORIGIN      
        1 catcgacacc ggctctttcg tccgttgaca gaccacgacg tggcgcacga agggcaggtc
       61 ctccaccgct tcgtccaccg tgttcttcag gggaacgacg ttgccacgtc gataccctac
      121 gtccgcggtg ataatcacct cgctgtggca atcctccgct cgatcctgaa tcgccttcgc
      181 gctgaagccc gcgaagatca cgctgtgaat cgctcctatt cgggcgcacg ccagcatggc
      241 gatcggaagc tcggggatcg ccggcaggta gatcgtgacg cggtctccgc gcttgacccc
      301 gaggcgcttt aacacgttcg cgaaccgatt cacctcccgc cacaccatct gatacgtcag
      361 gacccgccgg tctcccggtt ctccctccca gacgatcgcg gccttgttcc gccgcgggga
      421 gtcgaggtga cggtccaggc aattctgcga gacgttgatc tggccgccga cgaaccattt
      481 ggcaaaaggc ggcttccact cgaggacctt cgaccatttc ttgatccata cgagttcctt
      541 ggcttgattg gcccagtacc tctccggatc ggcggcggct tcgcgcggga ccttcggatc
      601 gtgaacccag gcgtccttgc ggaacgactt cggcggcggg tactcctcct tttccttcag
      661 gaggctatcg atcgtcgcgc tcgatacgac cacccgatta ccccgctaat tcgtgtaatt
      721 gaacgatacc ttatgagtga atcgcctcga aatacggtcc ccaaaccgcg ggctgaccgc
      781 aggaatcaaa atactcgtac tcgtctattc cctcgagcat gctgtggaca ggccccgctc
      841 ccgaacaata tggggaaacc ggagcgtgag ggccttggca tcaactcagc tttcccgctc
      901 gccccttacc gccgaggacg cgtcaatccc gatcctgatc ctgttgagtc tgcacgttgg
      961 cctcttcctc ctcatcgctg gcgccctgtt tcccacggac gtggagatga gtattttcag
     1021 tcccggcctg aaggtcgaat ctttcctttt cctttttgct gtcctctatc tactcttggg
     1081 tttgatggga gtcgtttcct catacgggcg gaggttcggc ttggtcctat ctgcggttgc
     1141 cgtgccgttc ctcgtcttcc tgctcgcggc ggctcgcgcc ggcgacgtta gtttgaccag
     1201 gtcaggttgg ttcctcgccc tttccctcct tgactccctc gccatcgtga tcgctttgct
     1261 cctgccccgt atcatcggcc actcgcccca tcctccatag gtgagtcgag gcgcgtcttc
     1321 atgtggaggg actaccgcac cgaaatcaga ccatcgggac ccaagcccga cgagccgatc
     1381 cagttaacct taaacaaggt tgacatcaat ccgtgagcaa gactcctcgg atggcccgct
     1441 cggtctcagg gtcgtaggac gactttaatc gagtcacggg cctccgctac gagtcggaat
     1501 ccctccgcag ccttgcccag cgggagcacg tgcgtaatca gatccgtgac gaagaggcgt
     1561 ttctctcgga gcagattgac ggattcgcgg atatcgcgag ggctcccgcc gtaagaggag
     1621 gtgagcgtga tttcctctcg ccaaagctcg ttgaaaggga tgtctacttt cgctgccgga
     1681 tcgatcggcg cgaagaatag gaccgtcccg ccccggtcga ccgaggcgag cccttgagcg
     1741 atcgccttcg gagcaccggt gcatgtgatg accaggtccg cgaggttccc ttcgttcacc
     1801 tctttcacgc gcatgggaac atcctctcga ccgtcgatga cgacgtcggc accagccttc
     1861 cgcgcggcgg ccttccgaaa ctccacaacg tcggtcgcga tcaccttcgc agccccggcc
     1921 gccttcgcga gtttgatgtg caacagcccg gcgacgccgc tgccgaggac gagcatcgtg
     1981 cctcccggac ggaagcccgc gagccgctga ccgcggatta cgcaggcgag cggctccacg
     2041 aacgtggcct cgtcatccgg gatttcccgc gggagcggga acactccgtg cttcacgttg
     2101 atcgcgggca cgcggacgaa ctccgcaaac ccgcccggat cgaa
//
LOCUS       DATLMA010000405         1100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_97963, whole genome shotgun sequence.
ACCESSION   DATLMA010000405 DATLMA010000000
VERSION     DATLMA010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97963"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..740
                     /locus_tag="VNA10_05200"
     CDS             <1..740
                     /locus_tag="VNA10_05200"
                     /inference="COORDINATES: protein motif:HMM:TIGR02179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster-binding protein"
                     /protein_id="HVG37108.1"
                     /translation="PYTLVIVPGGASFAGLWVFKDDHTDYRCLGALAKVLPDWVRLED
                     VKTLIKDQTKDEAAVQSAQYGFDGAQLRPVKVGEGTSGHEVLQFEKPGWTTMRPGIIV
                     NARKPGERNPQYKKYGARTLRPVVNFDTCIKCTMCWLDCPDECFEVTPEGHYEVVYQA
                     CIGCGICAQVCPVKDCIVMVDELKFEDNEDKWQFWKKDHDGYNKWFEAKSGVSADPKV
                     RTPAARREGSGNANPSANPTSSTGGDE"
     gene            886..>1100
                     /locus_tag="VNA10_05205"
     CDS             886..>1100
                     /locus_tag="VNA10_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012710501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37109.1"
                     /translation="MAVQVKEREHQDVETEQLMSGCEAIAEAIRLADVDVMAAYPIRP
                     YDGVMQAAAKLIANGKMDVEYIVADGE"
BASE COUNT          218 a          342 c          383 g          157 t
ORIGIN      
        1 ggccctacac gctcgtcatc gtccccggcg gcgcgtcgtt cgcgggtctc tgggtattca
       61 aagacgacca caccgactac cgctgcctgg gcgcgctcgc gaaggtcctg cccgattggg
      121 ttcgcctcga agatgtgaag acgcttatca aggaccagac gaaggacgag gccgcggtcc
      181 agtccgcgca gtacgggttc gacggcgcgc agcttcggcc agtcaaggtg ggcgagggca
      241 cgagtggcca cgaggtgctc cagttcgaaa agcccggatg gaccacgatg cgaccaggca
      301 tcatcgtcaa cgcgcgcaag cccggggagc gaaacccgca gtacaagaag tacggcgcgc
      361 gcacgctacg gccggtcgtc aacttcgaca cgtgcatcaa gtgcacgatg tgctggctcg
      421 actgtccgga cgagtgcttt gaggtcaccc ccgaggggca ctacgaggtc gtctaccagg
      481 cgtgcatcgg ttgcgggatc tgcgcgcagg tctgtccggt gaaggactgc atcgtgatgg
      541 tcgacgagct caagttcgag gacaacgagg acaagtggca gttctggaag aaggaccacg
      601 acggatacaa caagtggttc gaggccaaga gcggggtctc cgctgacccg aaggtgcgga
      661 ctcccgccgc tcggcgggaa ggctcgggca acgcgaatcc gtccgcgaac ccgacttcgt
      721 cgaccggagg tgacgaatga acgagcgacg aacggcgcgc ttcgcgctcc gctacgcgtc
      781 cgggggcccc tgccccctgg gcctctgccc ctgccgacga ggagcgagtc cgcaggcagc
      841 ggagcgggcg gcgaggccga aggccgagcg cgaggaggtg gcctgatggc tgtacaggtc
      901 aaggagcgcg aacaccagga cgtcgagacc gagcagctca tgagcgggtg cgaggcgatc
      961 gccgaggcca tccgtctcgc cgacgtcgac gtcatggccg cgtatccgat ccgtccgtac
     1021 gacggcgtca tgcaagccgc cgcgaagctc atcgccaatg ggaagatgga cgtcgaatac
     1081 atcgtcgccg acggcgagca
//
LOCUS       DATLMA010000406         3239 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_162680, whole genome shotgun sequence.
ACCESSION   DATLMA010000406 DATLMA010000000
VERSION     DATLMA010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3239
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162680"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VNA10_05210"
     CDS             <1..951
                     /locus_tag="VNA10_05210"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37110.1"
                     /translation="LNYVLIRLMPGNAEANLAPHNPQYAGYLADNIRIFGLDQSQEAQ
                     FAIYLKNAFTLNWGISYYWKQPVADLLLHDLTWTLLLVGTSTIFTTLIGMIVGSYAAV
                     RRGKPFDLLSTGGGIFLYGMPIFWLGIMLQLGSQKINPIMHSNFTWWPTIPTQGYWDD
                     PNTGFPQVWAWDWLHVSNVLLHLFLPALTLSLGTLAGISLVMRSSLIDVMTEDFVLTA
                     RAKGLNDGQVLRRHIFPNGLPPMLSLIALDIAFIFGGAYQVEWVFNYKGIGWRTISAI
                     EHLDFPTLQFIIVIGGVAIVLANLFSDFLLLWLDPRIKIT"
     gene            964..1911
                     /locus_tag="VNA10_05215"
     CDS             964..1911
                     /locus_tag="VNA10_05215"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37111.1"
                     /translation="MGATEVVTKRPTLSPFRATLTVAWRRANQVWTRIYHSRNAMAGL
                     IILLFFTTLAIAAPWIAPYGPTQSVGDTTCSRLQVPATYLQPPCSAHPLGTNYFSNDI
                     YSQVVWGTQISFIVGIASAVVATVVGTGMGLISGYVGGWIDEVLMRFNDVVLSIPWLV
                     LMIVVAAKVGVVDLTGVILVIGLTGWSVTARVIRTQVLSIKERMFVERAKMIGTPSSR
                     ILVRHIFPNAFPLIFANTILTIAVSILSESVLAFLGLRPPDTVSWGRIIAEAIENDAV
                     LYNAWWLIIPGLCIVFLVFGFYLFGYALDEILNPRLRRR"
     gene            1943..2911
                     /locus_tag="VNA10_05220"
     CDS             1943..2911
                     /locus_tag="VNA10_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014737835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37112.1"
                     /translation="MEYTTQAGTVRAVQGVSFELGEGEALGLAGESGCGKTTTALAVM
                     RLLPYNGRIVSGEIRFNGRNLVKLSELSIQRIRWKDISIIFQGAMNSLNPVRNIGRQI
                     AEPIILHEKVDEEAAMKRVGELLELVGINRERRRDFPHEFSGGMRQRVMIAMALACNP
                     KLVIADEPVTALDVMIQAQILELLERLRKELHLSMILISHDLSVMAETCDKVAIMYGG
                     KMMEVGKTVDVFTDPKHPYTQGLVAAFPDIRGQRTMPSSIPGDVPSLINPPAGCVFHP
                     RCKFAFDRCTTAEPALAEVTPGRRAACFLYPEVPEVTARPMTVEAR"
     gene            2932..>3239
                     /locus_tag="VNA10_05225"
     CDS             2932..>3239
                     /locus_tag="VNA10_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010866461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HVG37113.1"
                     /translation="MWFPLRRGLLRELTGRSSLWVRAVDGVSFDVKRGEVFCLVGESG
                     CGKTTTGKALLRLVDATEGDVFFEIPTEEYRRYEELRSAGGPDAAARIDALRRKYSFS
                     "
BASE COUNT          561 a         1063 c          990 g          625 t
ORIGIN      
        1 ctcaactacg tcctgatccg gctcatgccg gggaacgcgg aagcgaacct cgctccccat
       61 aatccgcagt acgccgggta cctggcggac aacatccgga tcttcggcct cgatcaatcg
      121 caagaggcgc aattcgcaat ctacctgaag aacgcgttca cgttgaactg ggggatttcc
      181 tactactgga agcagccggt cgcggacctg ctcctgcacg acctcacgtg gacgctcctc
      241 ctcgtcggca cctcgacgat cttcacgacg ctcatcggga tgatcgtggg gtcctacgcc
      301 gcggtccggc gggggaagcc gttcgacctc ctctcgaccg gcggcgggat cttcctctac
      361 gggatgccga tcttctggct cggaatcatg ctccaacttg ggtcccagaa gataaacccg
      421 atcatgcaca gcaacttcac ctggtggcca acaatcccga cccaaggata ttgggacgat
      481 ccgaacacgg gcttcccgca agtctgggcc tgggactggc tccatgtctc gaatgtcctc
      541 ttgcatctgt tcctgccagc gctcacgttg agccttggaa cgctcgcggg catctccctc
      601 gtgatgcgca gctccctcat cgacgtgatg acggaggatt tcgtcctcac ggcgagggcg
      661 aaaggactca acgacggaca agtcctccgc cgacacatct tcccgaacgg tctcccgccg
      721 atgctctccc tgatcgcgct cgacatcgcg ttcatcttcg gaggggcgta ccaagtggag
      781 tgggtgttca actacaaggg gatcggttgg cggacgatct ccgcgattga acacctcgac
      841 ttcccgaccc tgcaattcat catcgtgatc ggtggggtcg cgatcgtgct cgcgaatctg
      901 ttttccgatt tcctcctgtt gtggctggac ccgcgaatca agatcacgta acggaggctg
      961 cggttgggcg ctacggaagt cgtcaccaaa cgaccgacgc tctcgccctt ccgggccacg
     1021 ttgaccgtgg cctggagacg ggccaaccaa gtctggaccc ggatctacca cagccgaaac
     1081 gcgatggccg gtctgatcat cctgctcttc ttcaccacgc tcgccatcgc cgctccgtgg
     1141 atcgcgccgt acggcccgac gcagtccgtc ggagacacca cgtgcagtcg gctccaggtc
     1201 cccgcgacgt atctgcagcc tccgtgttcg gcccatcccc tcggaacgaa ctacttcagc
     1261 aacgacatct attcgcaggt ggtctggggc acccagattt ccttcatcgt cggaatcgcc
     1321 tcggcggtcg tcgccacggt cgtcgggacc gggatggggt tgatttccgg gtacgttggc
     1381 ggatggatcg acgaggtcct catgcgcttc aacgacgtcg tcctctcgat cccgtggctc
     1441 gtcctgatga tcgtcgtcgc cgcgaaggtc ggggtggtcg acctgaccgg cgtcatcctc
     1501 gtcatcggcc tcacgggctg gtccgtgacg gcccgggtga tccggaccca ggtcctctcg
     1561 atcaaggaac ggatgttcgt cgagcgggcg aagatgatcg gtaccccgag ctcgcggatc
     1621 ctggtccgac acatctttcc gaacgcgttc cccctgatct tcgcgaacac gatcctcacg
     1681 atcgcggtct cgatcctgtc ggagagcgtc ctcgcgttcc tcggcctccg gccgcccgat
     1741 actgtgagct gggggcgcat catcgcggag gcgatcgaga acgacgcggt cctctacaac
     1801 gcgtggtggc tcatcatccc gggtctctgc atcgtcttcc tcgtgttcgg cttctacctg
     1861 ttcggatacg ccctcgatga gatcctgaac cctcgcctcc ggaggcggta gcctgggccg
     1921 cctggaggtc aaggacctct tcatcgaata cacgacccag gccgggaccg tccgcgcggt
     1981 ccaaggcgtc tcgttcgagc tcggggaagg cgaggcgctc ggtctcgccg gcgaaagcgg
     2041 ttgcggcaag acgacgaccg cgctcgcggt catgcgcctg ctcccgtaca acgggaggat
     2101 cgtgagcggc gaaatccgct tcaacgggag gaatctcgtc aagctatcgg agctctcgat
     2161 ccaacggatt cggtggaagg acatttcgat catcttccag ggcgcgatga actcgctgaa
     2221 cccggtgcgc aacatcgggc ggcaaattgc cgaaccgatc atcctccacg agaaggtcga
     2281 cgaggaggcg gcgatgaagc gcgtcggcga actgctcgag ctcgtcggga tcaaccggga
     2341 acggcgtcgg gactttcccc acgagttctc cggcggcatg cggcagcgcg tgatgatcgc
     2401 aatggccctc gcctgcaatc cgaagctcgt gatcgccgac gaaccggtca cggccttgga
     2461 cgtgatgatc caggcccaga tcctcgagct cctggagcgg ctgcggaagg agctccatct
     2521 ctcgatgatc ctgatttccc acgatctcag cgtgatggcg gagacatgcg acaaggtcgc
     2581 catcatgtac ggagggaaga tgatggaggt cggcaagacc gtcgacgtct tcacggatcc
     2641 gaagcatccg tacacccagg gactcgtcgc ggccttcccc gatatccggg gtcagcgcac
     2701 gatgccctcc tcgatccccg gggacgtgcc gagcctcatc aatccccccg ccggctgcgt
     2761 cttccatccg cgatgcaagt tcgcgttcga ccgttgcacg accgcggaac cggccctcgc
     2821 ggaggtcacc ccgggccgcc gggcggcgtg tttcctctat cccgaggtcc cggaggtgac
     2881 ggcacggccg atgacggtcg aagcccgctg atccgggtcc gcgatctcaa ggtgtggttc
     2941 cccctccggc gcggcctcct acgggagttg acgggtcgtt cctccctctg ggtccgggcg
     3001 gtggacggcg tctcgttcga cgtgaagcgg ggcgaagtct tctgcctggt gggcgagagc
     3061 ggttgtggga agacgacgac cggcaaagcg ctcctccgcc tcgtggacgc gaccgaaggc
     3121 gacgtcttct tcgagatccc gacggaagag tatcgaaggt acgaggagtt gcgttcggcc
     3181 ggtggcccgg acgcagccgc tcggatcgac gcgctccgac ggaagtactc cttctcctg
//
LOCUS       DATLMA010000407         1988 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_459619, whole genome shotgun sequence.
ACCESSION   DATLMA010000407 DATLMA010000000
VERSION     DATLMA010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459619"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VNA10_05230"
     CDS             <1..697
                     /locus_tag="VNA10_05230"
                     /inference="COORDINATES: protein motif:HMM:NF016051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HVG37114.1"
                     /translation="KAKMADIETIVAHVIRRLGPKDLVDMRVLVVAGSTVEPIDDVRV
                     VTNRSTGGTGIELAKAAFEHGADVELWLGRHETPVPPWLPFKAFETTADLVSMAEKAD
                     ADVCVVPAAVSDFTPTKKAGKIPSRDGVLSLDLQPTPKVLNRFRKGAKKALVGFKAEA
                     GVSEADLKARAMALVKEADVDFVVANDISKVKGDTTSITIFDRKGHSETFEGSKALAA
                     ERVWRAILHGVRG"
     gene            681..1553
                     /locus_tag="VNA10_05235"
     CDS             681..1553
                     /locus_tag="VNA10_05235"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HVG37115.1"
                     /translation="MVSEGEAFCPGHVTAFFEVHDDSDPRKKGSRGAGLCLNLGVHTV
                     ARVRDDARSSIDIIVNGRRQKAEVTQRVAQKVLGGRSCEVKILSETDLPVSQGFGVSA
                     AAGLSTALALDEALGSHVPRDELVAIAHETEVECGTGLGDVVPASMGGMDLRLKPGAP
                     AHAEVRTFPVDADLLLAVIGPEMPTKAVLRDPKKVAAINRIGGALVDEFSHGPTLERL
                     FELGARFAEGTGLADKRVLEVIRASRMFGRATMAMLGNSVVAMGNREQLATLYLKFGT
                     LQRCGVDNEGARVL"
     gene            complement(1554..1838)
                     /locus_tag="VNA10_05240"
     CDS             complement(1554..1838)
                     /locus_tag="VNA10_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015504045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF357 domain-containing protein"
                     /protein_id="HVG37116.1"
                     /translation="MDLRAMVDKDVSLTERALAKVKLAPPPRSHLRKVAEDFLGMARA
                     YFEDAKHFRDRGELEKALANVNYAHGWLDAGARVGLFDVGGDDQLFTLSD"
BASE COUNT          343 a          625 c          690 g          330 t
ORIGIN      
        1 gaaagcaaag atggcggaca tcgagacgat cgtggcccat gtcatccgcc gacttggtcc
       61 gaaggacctc gtcgacatgc gtgtgttggt cgtggccgga tccacggttg agccgatcga
      121 cgacgtccgt gtcgtgacga accgctcgac gggcgggacg ggaatcgaac tcgccaaggc
      181 cgccttcgag catggcgcgg atgtggagct ctggctcggg agacacgaaa ccccggtacc
      241 gccgtggctt ccgttcaagg ctttcgagac gaccgccgat ctcgtctcga tggccgagaa
      301 agcggatgcg gacgtctgcg tcgtccccgc cgcggtctcg gacttcacgc cgacgaagaa
      361 agccggcaag attcccagcc gggatggcgt cctgagtctg gacctgcagc cgacgcccaa
      421 ggtcctcaat cggttccgca agggcgcgaa gaaggccctc gtgggattca aggcggaggc
      481 gggtgtcagc gaggcggacc tgaaggcgcg cgcgatggcc ctcgtcaagg aggcggacgt
      541 cgatttcgtc gtggcgaacg acatctccaa ggtcaagggg gacacgacgt ccatcacgat
      601 cttcgatcgc aagggtcact cggagacgtt cgaagggtcg aaggccctcg cggccgagcg
      661 ggtgtggcgg gccatcctcc atggtgtccg agggtgaggc gttctgcccc gggcacgtca
      721 cggcgttctt cgaggtgcac gacgattcgg atccgcggaa gaaaggctcg cgtggggccg
      781 gcctgtgcct gaacctcggg gtccacacgg tcgcacgggt tcgcgacgac gcgcgttcat
      841 cgattgacat catcgtgaac gggcggcgcc aaaaggcgga ggtcacccag cgcgtcgcgc
      901 agaaggtcct cggcggtcgg tcctgcgagg tgaagatcct gagcgagacg gacctgccgg
      961 tgtctcaggg gttcggcgtg agcgcggccg cgggattgag cacggcactc gccctcgacg
     1021 aggccctcgg atcgcacgtg cctcgagacg agctggtcgc catcgcgcac gagacagagg
     1081 tggaatgcgg caccggtctc ggcgacgtgg tccccgcgtc catgggggga atggacctgc
     1141 ggctcaaacc gggagcgccg gcccatgcgg aggtgcgaac cttccccgtc gacgcggacc
     1201 tcctgctcgc ggtgatcggc ccggaaatgc cgacgaaggc ggtgcttcgc gatccgaaga
     1261 aggtcgcggc gatcaaccgg atcggcggcg ccctggtgga cgagttctcc catggtccca
     1321 ccctggagcg actcttcgaa ctcggggctc gctttgccga aggaacgggc ctcgcggaca
     1381 aacgggtcct cgaagtgatt cgagccagcc gcatgttcgg gcgcgcgacg atggccatgc
     1441 tcggcaattc ggtggtcgcg atggggaacc gcgagcagct ggcgaccttg tacctgaaat
     1501 tcgggacgct gcagcggtgt ggcgtcgaca acgaaggcgc gcgcgtcctc tgatcaatcg
     1561 ctcaaggtga agagctggtc gtcgccgccg acatcgaaga gtccgactcg ggcgccggca
     1621 tcgagccacc catgggcgta attcacgttc gccagggcct tctcaagttc gcctcggtcg
     1681 cggaaatgtt tcgcgtcctc gaagtaggcg cgggccattc cgaggaagtc ctccgccacc
     1741 ttccggaggt gggagcgcgg aggcggggcc agcttgacct tcgcgagtgc cctctccgtg
     1801 aggctgacat ccttgtcgac catcgcgcga agatccacgc tcgtccatcg ggcgcgatgc
     1861 taaaaccttt cccgctcccc gtctgcgggg cgcgcgtcgg tcaatcctcg atgaccttga
     1921 cgctctctcc accgtgacgg gtttcccgcg gacgcacttc gaccatgagc ggcatctgga
     1981 gcccgccg
//
LOCUS       DATLMA010000408         1105 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_39215, whole genome shotgun sequence.
ACCESSION   DATLMA010000408 DATLMA010000000
VERSION     DATLMA010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39215"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..556)
                     /locus_tag="VNA10_05245"
     CDS             complement(50..556)
                     /locus_tag="VNA10_05245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37117.1"
                     /translation="MDQDRSAEIAATFERIRRPLRWPMENFRRKHIANHQFVGYRFSR
                     VRRRSTAGFSFGFALRNDSLPGIVEAPEVVGYAFVEPANSALHRDLVERRNGAVHRLA
                     SMSRRMGCPFELHADGAVAAVRHRSVRHVPDELFALVASDFLMLCYQPLRAAGFLERV
                     TKATTGPG"
     gene            733..>1105
                     /locus_tag="VNA10_05250"
     CDS             733..>1105
                     /locus_tag="VNA10_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37118.1"
                     /translation="MDGEKAFAPPDAPEHPPRDRTFLLQHVRLEITVDDQARTISGTV
                     THRLSPINDGLTEVALDAGDLNIHKVLDDGGHELEWELHGETLSIHLPKARKAGQAIE
                     LRISYDAKPRKGIFFTGPDKAN"
BASE COUNT          213 a          365 c          364 g          163 t
ORIGIN      
        1 gacaggcccc acgttcccgc ggcaatcgcc ctcgagctcg gcgcgtgacc tagccggggc
       61 cggtggtggc cttcgtgacc cgctccaaga acccggccgc ccgcagcggc tggtaacaga
      121 gcatgaggaa gtccgacgcc acgagggcga agagctcgtc cggcacgtgg cgcacggatc
      181 ggtggcggac cgcagcgacc gcgccgtcgg cgtggagttc gaacggacag cccatccgcc
      241 gactcatgga ggccagccga tgcaccgcgc cattgcgtcg ttcgacgagg tcccgatgga
      301 gggccgagtt cgcgggttcc acgaacgcat agccgacgac ctcaggtgcc tcaacgatcc
      361 ctggtaggga atcattccga agggcgaatc cgaagctgaa tccggcggtc gaacggcgtc
      421 ggactcgcga gaaccggtag ccaacgaatt ggtggttcgc gatgtgcttg cgccgaaagt
      481 tttccatcgg ccatcgcaac ggccggcgaa tccgttcgaa cgtcgcagcg atttcggcgc
      541 tgcggtcttg gtccatccgg ggtcgggaca tcgttgcgaa ccataagaac tgcgggccga
      601 caggcaaggg ctggatccgg accggcgcgg ttcggggcaa gcctaaatag acctcgaccg
      661 ttccgccgcg cgcagggtgg cccgggggtt tccgtgagcg aattttcgga atcgtgccgg
      721 cgactcggtc ggatggacgg ggagaaggcc ttcgcgccgc cagacgcgcc ggaacatccg
      781 ccgcgggacc ggacgttcct ccttcagcac gtccgcctcg agatcaccgt tgatgaccag
      841 gcgcgcacga tctccggaac cgtcacccat cgcctctcgc cgatcaacga cggcctcacg
      901 gaggtcgcac tcgacgcggg agacctgaac atccacaagg tcctcgacga cgggggccac
      961 gaactcgagt gggagctcca cggagagacc ctctcgatcc atcttccgaa agcgcgcaaa
     1021 gccggccagg ccatcgaact tcggatctca tacgacgcga agccgcggaa agggatcttc
     1081 ttcaccggac cggacaaggc gaacc
//
LOCUS       DATLMA010000409         1074 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_827672, whole genome shotgun sequence.
ACCESSION   DATLMA010000409 DATLMA010000000
VERSION     DATLMA010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827672"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VNA10_05255"
     CDS             <1..213
                     /locus_tag="VNA10_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37119.1"
                     /translation="STTANIIDKPGPNLIPLYALAGGLLVVGLVVGVVVGRMMSRGRK
                     PPKSSGMMDEPKGGQAEEELPPEENL"
     gene            343..>1074
                     /locus_tag="VNA10_05260"
     CDS             343..>1074
                     /locus_tag="VNA10_05260"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37120.1"
                     /translation="MASLRRYLVRRAIQGVITIFVVTIIIFLLFQALPGGPLAAYTQD
                     PTCQAACRAQLRLQFGLDQPWYVQLWIFLGNMFTFNFGRSFSEGRPVAQVLALALPRT
                     LFLFGGALIAEYLVGIAVGRFIAWHRGKTEGLAIVSSLFFYNMPSFWIGLILLWAFGF
                     ALPIFPLNGFSDPTWTKSHFPSLAPGSFLFNAADIIMHGALPMLALVLISAAGTILLM
                     QTSMLEVLGEDFILTARAKGLSARKV"
BASE COUNT          169 a          331 c          334 g          240 t
ORIGIN      
        1 tcgaccaccg cgaacattat tgataagcca ggtccgaacc tgatcccgct gtacgcgctt
       61 gcgggcggtc tgctggtagt cggcctcgtt gtcggcgtag tcgtcggccg catgatgagc
      121 cgcggccgga aaccgcccaa gagctcggga atgatggacg agccgaaggg cggacaagcc
      181 gaggaggagt tgccgccgga ggagaacctc taggaccgaa cgaccggggc gtccgccccg
      241 gtccctttcc tctttccgtt ttttggatcc ctcggtccgg tcgggggaac gtacaaatat
      301 gctggcgacc gttagaagta ccggagtcgg gggtgagtcg ggttggcgtc gctgagacga
      361 tacctggttc gtcgagcgat tcagggtgtc atcacaattt tcgttgtgac catcatcatt
      421 ttcctgctct tccaggcgct gcccggaggg ccgctcgctg cgtacacgca agatccgacg
      481 tgccaggctg cctgtcgagc ccagcttcgg ctccagttcg gcctcgatca accgtggtac
      541 gtacagctgt ggattttcct cgggaacatg ttcacgttca acttcggtcg ctcgttctcg
      601 gaaggaaggc ccgtcgcgca ggtcctcgcg ctcgcgttgc cgcggaccct gttcctgttc
      661 ggcggcgcgt tgattgcgga gtacctggtc ggaatcgcgg tgggccggtt catcgcgtgg
      721 catcgtggca agacggaggg cctcgcgatc gtctcgagcc tcttcttcta caacatgcct
      781 tcgttttgga ttggactcat tctgctgtgg gcgttcgggt tcgctctccc gatcttcccg
      841 ctcaacggat tcagtgatcc gacctggacg aagtcgcact tcccgtcctt ggccccggga
      901 agcttcctgt tcaacgcggc ggacatcatc atgcacggcg cgctccccat gctcgccctc
      961 gtcctgatca gcgccgccgg cacgatcctc ctcatgcaga cctccatgtt ggaggttctg
     1021 ggagaagact tcatcctgac ggcgcgcgcg aagggcttgt ctgcgcgaaa ggtc
//
LOCUS       DATLMA010000410         1102 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_341180, whole genome shotgun sequence.
ACCESSION   DATLMA010000410 DATLMA010000000
VERSION     DATLMA010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341180"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            261..503
                     /locus_tag="VNA10_05265"
     CDS             261..503
                     /locus_tag="VNA10_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HVG37121.1"
                     /translation="MKVFATELRGKTVMTEDGQILGILADFLVETKTGRIPSLLVTPA
                     ETVETRLFKTDPEGRLTLSFRSMKAVRDVIVVQLAD"
     gene            524..>1102
                     /locus_tag="VNA10_05270"
     CDS             524..>1102
                     /locus_tag="VNA10_05270"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HVG37122.1"
                     /translation="MANLTFYGGVGEIGGNKILVEDRDARIWLDMGAPFDLGEEYFVE
                     FLQPRERFGLRDYFALDLMRRIPGLYSAEALDRTDMAWEPPAFSSIFITHVHYDHTQQ
                     LKFVDPNIPVHLGEGARTILESLDTTARAPFLKLGTHAYQTFRSGQTRTVDGLEVEPI
                     HVDHSAPAAYGYLVHTSEGTIAYTGDLRHHGPK"
BASE COUNT          216 a          356 c          345 g          185 t
ORIGIN      
        1 aagaagccgt tcgtctctcg gttgtacgcc tcgaccgcgg aggtgacgag gccgacgaag
       61 gcgctgcgtt cgacaacgat attatccatg gcgggagcct ccgttgaggg gccaaagaaa
      121 cgccaccggc tctataagaa agtgccgtcc cccgtctcac gaattcgtct ggctcgagtt
      181 cagacggttt cgtatcgacg tcatggcctc ggaggccaga aaggaaaaat aaggacccga
      241 agatacgcgc cgcggcggga atgaaagttt ttgcgacaga gctccggggc aagaccgtca
      301 tgaccgaaga cgggcagatc ctcggcatcc tggcggactt cctcgtcgag acgaagacgg
      361 gccgcatccc gtcgctcctc gtgacgccgg cggagacggt ggagacccgc ctgttcaaga
      421 cggaccccga aggccgcctc accctgagtt tccggtcgat gaaggccgtg cgggacgtga
      481 tcgtcgtgca gctcgcggat tgatcgagga ctcgaggcgt ggcgtggcga acctcacttt
      541 ctacggcggc gtcggcgaga tcggcgggaa caagatcctc gtcgaggacc gcgacgcacg
      601 gatctggctc gacatgggcg ccccgttcga cctgggcgag gagtacttcg tcgagttcct
      661 ccagccgcga gagcgcttcg gccttcggga ttacttcgcg ctcgatctca tgcgcaggat
      721 tccgggactc tattcggcgg aagcgctcga ccggaccgac atggcctggg agccgcctgc
      781 tttttcgtcc attttcatta cccacgtcca ctacgaccac actcagcagc tgaagttcgt
      841 cgacccgaac atcccggtcc acctcggaga aggcgcgcgg acgatcctcg agtcgctcga
      901 cacgaccgcg cgggcgccgt tcttgaaact cggcacgcac gcctaccaga cgttccgctc
      961 tgggcagacg aggaccgtcg acggcctcga ggtcgagccg atccacgtcg accacagcgc
     1021 cccagcggcg tacggatacc tagtgcacac gagcgagggc acgatcgcct acaccgggga
     1081 cctccgtcac cacgggccca ag
//
LOCUS       DATLMA010000411         1632 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_703722, whole genome shotgun sequence.
ACCESSION   DATLMA010000411 DATLMA010000000
VERSION     DATLMA010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703722"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /locus_tag="VNA10_05275"
     CDS             complement(<1..824)
                     /locus_tag="VNA10_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37123.1"
                     /translation="MPDAALPVEGFEGLHFGTNGPYTNRLTPPDVQVAVGPNHVVEMV
                     NVLGRIWTKQGVDVRTFPLDTFFGVPSTDFISDPKVHFDTASGRWFASITDVTTGSVL
                     LEVSRSDDPTLLWNASSVSTITGCADQPLLGLTDLAVLISANDFSSCTSGNPSYLGVQ
                     YWVLNKTDLLSGATPRTMSFGPDPTLFSVHPVQSLRSTNTEFMVSTGSGPTGTLTLFT
                     VTGVPPGVVLVTQQNLGIRSAAIPPRAPQLGSRSTLDTADNRVQDAMWADSRLWLS"
     gene            complement(1170..1243)
                     /locus_tag="VNA10_05280"
     tRNA            complement(1170..1243)
                     /locus_tag="VNA10_05280"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1206..1208),aa:Arg,seq:gcg)
     gene            complement(1276..>1632)
                     /locus_tag="VNA10_05285"
     CDS             complement(1276..>1632)
                     /locus_tag="VNA10_05285"
                     /inference="COORDINATES: protein motif:HMM:NF012624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside monophosphate kinase"
                     /protein_id="HVG37124.1"
                     /translation="MTKLDAAVNFFLEPEELIKRNTGRRVCPKDDTVYHILMNPPKKA
                     GVCDKCGTPLVIRADDREDVVRKRIETYERQTAPLIKYYRDRGLLREVYASGLIEEIF
                     LRAIEVLKESVPSRER"
BASE COUNT          304 a          488 c          550 g          290 t
ORIGIN      
        1 aacgagagcc acaggcggct gtccgcccac atcgcgtctt gcacccggtt gtccgccgtg
       61 tcgagggtgg acctcgatcc gagttgaggc gcccggggag gaatcgcggc cgatcggatc
      121 ccgagattct gttgagtgac aagcacgacg cccggtggga cgccggtgac ggtgaagagg
      181 gtcaaggtgc cggtaggccc gctccccgtc gacaccatga attccgtgtt cgtggagcgg
      241 agcgattgga ccgggtgcac ggagaacaag gtcgggtccg gaccgaagct catcgtccgg
      301 ggggtggccc cgctcaggag atccgtcttg ttcagcaccc agtactggac gcccagatat
      361 gacgggttcc cgctcgtgca cgaagagaag tcgtttgccg aaatgaggac ggcaagatcg
      421 gtgaggccga ggagcggctg atccgcgcag cccgtgatcg tggagacgct agacgcattc
      481 cacaggagcg tggggtcgtc ggacctggag acctcgagca ggacgctgcc cgttgtgacg
      541 tcggtgatcg aggcgaacca acgtccgctg gcggtgtcga agtggacctt cggatcgctg
      601 atgaagtccg tcgaggggac gccgaagaac gtgtcgagcg ggaaggtccg cacatcgact
      661 ccctgtttcg tccagatccg gccgaggacg ttcaccatct cgacgacatg gttcggtccg
      721 accgcaacct ggacgtcggg aggcgtaagg cgattcgtgt acggaccgtt ggtgccgaaa
      781 tggaggccct cgaagccttc gacggggagg gcggcatcgg gcaccgaagg ccatggtccg
      841 gcttggcggg gacgagtcgg gcggtctcca gccgccgcta gggagttcac cttcgatgcc
      901 aacgagactt gcggttctgc gggaaacgtc gcttggcgag gactctcttc gcgggatcgg
      961 gtcgccgtct cgaaggtcga catcgcgggg gcaatcgcga gcccaacgac cgcgcagagt
     1021 gcaaggaaca gcaggcacgg atgggaggat gccatgcttg cagaacgatg gtttgaaccg
     1081 ggcttaaatc cactcccgaa aatagtccgg cgggcgtaaa tcgcgagcgc aatggaccga
     1141 ggcattgttc ggagaaagcg ccggagagac gcccgagctg ggattcgaac ccaggtctga
     1201 agctccgcag gcttctagga tgtccaagct accccactcg ggcgcatcgg tcgcatcgcg
     1261 acgccgatat aactcttatc gctcccgaga cggcacggac tccttgagca cctcgatcgc
     1321 ccggaggaaa atctcctcga tcaggccgct cgcgtacact tcgcgcagca acccgcggtc
     1381 ccggtagtac ttgatcagcg gcgccgtctg cctctcgtac gtctcgatcc gcttgcgtac
     1441 gacgtcctcc cggtcgtccg cgcgaatgac gagcggggtg ccgcacttgt cgcagactcc
     1501 ggccttcttc ggcggattca tgaggatgtg gtacacggtg tcgtccttcg gacacactct
     1561 tcggcccgtg ttgcgcttga tcagctcttc cggctccagg aagaagttca ccgcggcgtc
     1621 cagcttcgtc at
//
LOCUS       DATLMA010000412         1416 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_98494, whole genome shotgun sequence.
ACCESSION   DATLMA010000412 DATLMA010000000
VERSION     DATLMA010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98494"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VNA10_05290"
     CDS             <1..395
                     /locus_tag="VNA10_05290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37125.1"
                     /translation="PSSRHCRNLERNPSLAMTIFRSAQVWGSEDRGLQLFGTCRRTRG
                     RGAREAERCYAARFSPYAKWMEGLSAAERRQAALLRSYAFYRFLPKRIKILDEREFGG
                     AMFVTAAVVRGSHSKAVVHWSATERLSP"
     gene            464..>1416
                     /locus_tag="VNA10_05295"
     CDS             464..>1416
                     /locus_tag="VNA10_05295"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HVG37126.1"
                     /translation="MPPLLITEKDVDGLLRMDDALGAVEEGLRALGRGEATNRPRQRV
                     GTREATVNVMLASWPGRGYAGFKYYTTSRTGIRFWVHLFDIATGELVAVIQADRLGQQ
                     RTGAASGVATKYLARSDASAVGIVGTGWQAQSQLEAVCAVRPIRRVRAYGPDKAHREA
                     FATKMSSLLGVTVQAAASAEEAIRDADVAVAATNAPQPVIHGDWLRAGCHINAIGANR
                     LETRELDDVAVGRCAFVATDSIEQAKEEGGDLVEPMKRGLIAWDRIHEISGVVAGKVA
                     GRTKADDITLFKSHGIAIEDVAVAALVFERARDRGIGQSVAL"
BASE COUNT          269 a          425 c          498 g          224 t
ORIGIN      
        1 acccttcatc gcggcactgc cggaatctcg agcgaaaccc ctccctcgcg atgacgatct
       61 tccggtcggc acaggtgtgg ggcagcgagg atcgagggct ccagttgttc gggacatgcc
      121 gacggacgcg cggccgagga gcgagggaag cggagcgatg ctacgccgca cggttttcgc
      181 cgtatgcgaa gtggatggag ggcctgagtg cggccgagcg acgacaggcg gccctcctcc
      241 gatcgtatgc gttctaccga ttccttccga agcggatcaa aatcctcgac gagcgagaat
      301 tcggcggcgc gatgttcgta acggccgcgg tcgtgcgggg ctcacattcg aaagcggttg
      361 tgcattggag cgccacggaa cgtctgtcac cctgaccggg ccgatgcgcg gagacgtcgc
      421 caagagacat caaataggcg tagcccggat acacgggaat cggatgcccc cgttgctcat
      481 cacggagaag gatgtcgatg gcctcctgcg aatggacgac gccttgggag cggtcgagga
      541 agggttgcgc gccttggggc gaggcgaggc gacgaaccgc ccccgccaaa gggtgggaac
      601 gcgcgaggcg acggtgaacg tcatgctcgc ttcatggcca gggcgcggat atgccgggtt
      661 caagtactac acgacgtccc gcacgggcat ccgattctgg gttcacctgt tcgacatcgc
      721 aaccggagaa ctcgtcgccg tgattcaggc ggaccgactc ggccagcagc gcactggggc
      781 ggcgtctgga gtcgcgacca aatacctcgc gcgatccgat gcgtcggcgg ttggcattgt
      841 tggtaccgga tggcaagcac aaagtcagct ggaagcggtg tgtgccgtcc gcccgatccg
      901 acgagtccgc gcctacggtc cggacaaggc ccaccgcgag gccttcgcga cgaagatgtc
      961 ctcgctcctg ggggtgaccg tccaagcggc agcatccgct gaagaagcga tccgagacgc
     1021 ggacgtggcc gtcgcggcga cgaacgcgcc tcagccggtc atccatggag attggttgcg
     1081 tgccgggtgc cacatcaacg ccatcggagc gaaccgcctc gagacccgcg aactcgatga
     1141 cgtcgcggtc ggtcgatgcg cgttcgttgc gacggattcg attgagcaag cgaaggagga
     1201 gggaggcgac ctcgtggagc cgatgaaacg cggcctgatc gcctgggacc gcatccatga
     1261 gatcagcggg gtcgtcgcgg gcaaagtcgc agggcggacg aaggcggacg acatcacgct
     1321 gttcaagtcc cacggaatcg cgatcgagga tgtcgcggtg gccgcgctcg tattcgagcg
     1381 agcccgggat cgcggaatcg gccagtcggt cgccct
//
LOCUS       DATLMA010000413         3322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_703792, whole genome shotgun sequence.
ACCESSION   DATLMA010000413 DATLMA010000000
VERSION     DATLMA010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703792"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..578
                     /locus_tag="VNA10_05300"
     CDS             231..578
                     /locus_tag="VNA10_05300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37127.1"
                     /translation="MAEGEAITTRTDFVRRALLERRYQPDASYAQDLLALERFLSSRS
                     VGMAESLALSNLLSRYPREAEAIARELGVRPFVPLEDERVLALVDERLRLAESRHPLR
                     RLRPSDPVSLFEF"
     gene            complement(621..1283)
                     /locus_tag="VNA10_05305"
     CDS             complement(621..1283)
                     /locus_tag="VNA10_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37128.1"
                     /translation="MEIPLSDIRQGCALLIQRIRRHASDAMVLLQTGAGHDQGALILM
                     LIGFEELGKLLEYIQEAAKAEHSSKNMVNVRDYRDPEFRRNVHTLKAELTSDYFRRAL
                     HLVDSAMQAGGAAGLELGPYSDHLSAIGADFRRTRRHAMYLDFENGIWTSGKPVDTGT
                     LTTDIFGLLIGAGLIEAAMEGQTTFAGVVNKSIEGEKNLQDLVKEVIRAILQSGFKPS
                     ER"
     gene            1432..>3322
                     /locus_tag="VNA10_05310"
     CDS             1432..>3322
                     /locus_tag="VNA10_05310"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HVG37129.1"
                     /translation="MRRLILAEKFSAARRLAQILSEGMAEKVRADASSYFTFSSGGDE
                     IIVFPLRGHIVEIDYPESVRDWVGTDLDALVDMEPVRLEAPPALHDALRRLADSVDEV
                     VLATDYDREGELIGVEALETLRAQHPNLPARRARFSAMTTSEVRRAFENLVEPDWALA
                     EAAAARQRIDLAWGAVLTRFLTVECGSERQVLSAGRVQTPTLRLAADRERDREDFVPR
                     PFWNVVLVAGEPSFEATAVGGPFWDEGGARALVALAGLGDTAIVERVERRDHREPPPA
                     PFNTTSFLAQASRMGHSPSRAMAAAQELYVRGEISYPRTDNTVYPPSLPVREILGRLQ
                     KSPYHAYAARLLERPELEPSRGPIHTTDHPPIHPTAAPGKRRPGMRVTVYDMIARRFL
                     ATLSLPSLSTITEVHVRVGDTAFLAVGHTMVEPGWREILPDEHEVAALPEFQQGQELT
                     VREVRVVEDRTTPPPLHTQGTLLLTMQRLGLGTKSTRHEILDLLFRRQYIGGRSIRTT
                     AAGRALVDALTIYGPDVTDPEMTRHLEDRMNAIAEGRATLAEVVDESRRDLHEVLAEL
                     RAHQPSLVRWLRDASFLEKDFGPCDACPDGRMVRRRARNGWSFLGCNRFPACRRRLRL
                     SALGQR"
BASE COUNT          600 a         1104 c         1014 g          604 t
ORIGIN      
        1 tccggaccga agaaccgacg accgacgagc cgtgcgacgt ctgcggcggc ccgaccttcg
       61 agcggaactg caaggtcatc tgcgtcggct gcgggtacac gcgagactgc agcgatccgt
      121 gagtcgcgcc gctcgctgcc gttttcgacg gttgccggga acttcgtcat ttgacggata
      181 atctcacgac aaaagctata acccccggct cgcgtccgca gggctcgccc atggccgagg
      241 gagaggcgat cacaacgcgg acggacttcg tccgccgcgc actactcgag cgtcgctacc
      301 agcccgatgc atcgtacgcc caagacctcc tcgcgctcga gcgattcctt tcgagccgat
      361 cggtcggcat ggccgagtcg ctggccctgt ccaatctgct aagccggtac ccgcgggaag
      421 ccgaggcgat cgcgagggag ctcggagtcc gtccgttcgt cccgctcgag gatgagcggg
      481 ttctcgccct cgtcgatgaa cggctacgtc tcgcggagag ccgccatccg ctccggcgtc
      541 tgcgaccctc ggatcctgtc agcttgttcg aattctgatc gcggcgaggc cctacggcac
      601 cctgagtcga acgatacccg ttagcgctca ctcggtttga aaccactttg cagaatagcg
      661 cgaatcactt ccttgacgag atcctgcagg ttcttctccc cttcaatgct tttgttgacg
      721 actcctgcaa atgttgtttg cccctccatc gcggcctcaa tcaagccggc gccaattagc
      781 aatccaaaga tgtccgtcgt caatgtcccg gtatcgaccg gctttccgct ggtccagatg
      841 ccattctcaa agtccaggta catcgcatgc cttcgagtgc gcctaaagtc tgcaccgatt
      901 gctgaaagat gatcggaata tggtccaagt tcaagtccag ccgcgcctcc ggcctgcatg
      961 gccgagtcaa cgagatgtag cgcccgacgg aagtagtccg atgtcaactc agcctttaga
     1021 gtgtgaacat tgcggcggaa ctcggggtcc ctgtaatctc gtacgttgac catgttcttg
     1081 gacgaatgtt cagctttcgc cgcttcctgg atgtactcga gcaacttgcc gagctcctcg
     1141 aagcctatca gcatcaggat gagcgcgcct tggtcgtgcc cggctcccgt ctgaagcaga
     1201 accatcgcat cggaagcatg gcgccggatt cgctggatga gcaaggcgca gccctggcga
     1261 atgtccgaca gcggaatctc cattcgtatc gaaatcccac actcgaatac aagaccttct
     1321 cggttcttgc cgagtcggtt taggtcccac cttccacaaa aggccggccg aaataatgat
     1381 ttcaagcttt gacatgaaat ttaagtagag agtggacaaa tgggccatgg cttgcggcgg
     1441 ctcatcctag ccgagaaatt cagcgctgcc cgccgcttgg cccaaatcct gtcagaaggg
     1501 atggctgaga aggtccgggc agacgcctct agctacttta cgttctcgtc cggaggggac
     1561 gagatcatcg tgtttccgct ccgcggccac atcgtcgaga tcgactatcc agagtccgtc
     1621 cgggactggg tcggaaccga tctcgatgcc ctagtggaca tggaaccggt ccgcttggaa
     1681 gcgccacccg ccctgcatga cgcgctccga cgtctcgcgg actcggtcga cgaagtcgtc
     1741 ctcgcgaccg actacgaccg agagggcgaa ctgatcggcg tcgaggcgct cgaaaccctc
     1801 cgcgcgcagc atccgaacct ccccgcccgc cgggcacggt tcagcgccat gacgacgtcc
     1861 gaagtccgtc gggccttcga gaatctcgtc gagcccgatt gggcactggc ggaagccgcg
     1921 gctgcgcggc agcggatcga cctcgcgtgg ggcgccgtcc tcacgcgatt cttgaccgtc
     1981 gaatgcggct ccgaacggca ggtgctctcc gcgggtcgcg tgcagacccc caccttgcga
     2041 ctggccgcgg accgggaacg ggaccgggag gacttcgtgc cgcggccctt ttggaacgtc
     2101 gtgctggtcg ccggcgaacc gtcgttcgag gcgaccgcgg tcggtgggcc tttctgggac
     2161 gaaggcgggg cgagggcgct cgttgccctg gcgggtcttg gcgacacggc catcgtcgag
     2221 cgggtcgagc gtcgcgatca ccgcgagccc ccgccggctc cgttcaacac cacctcgttc
     2281 ctcgcgcagg cttcccgaat ggggcacagt ccgtctcggg ccatggcggc cgcgcaagag
     2341 ctgtacgtgc gcggcgaaat cagctatcct cgcaccgaca acacggtgta cccgccgtca
     2401 ctgcccgtcc gcgagatcct cggtcgattg cagaaatccc cctaccatgc atacgccgca
     2461 cgactcctgg agcgtccgga gctcgagccg agccgcgggc cgatccacac gaccgatcat
     2521 ccgccgatcc atccgaccgc cgcacccggg aagcgtcgac ccggaatgcg ggtgacggtg
     2581 tacgacatga ttgcccgccg ctttctggcg acactgtcgc ttccgagcct gtccacaatc
     2641 accgaggtcc atgtccgggt cggcgacacc gcgttcctcg cggtcggcca cacgatggtc
     2701 gagccggggt ggcgagaaat cctaccggac gagcatgagg tggccgcgct cccggagttc
     2761 caacagggcc aggaactcac cgtccgcgaa gtgcgggtcg tcgaagatcg gacgacgccg
     2821 cctccgcttc acacgcaggg gacactcctc ctgacgatgc aacggctcgg cctcggcacg
     2881 aaatcgacgc gtcacgagat cctcgacctc ctgttccgcc ggcaatacat cggaggccgt
     2941 tcgatccgga ccacggccgc gggacgcgcc ttggtcgacg ccttgacgat ctacggtccg
     3001 gacgtcacag atccggagat gacgcgccac ctcgaggacc ggatgaacgc catcgcggag
     3061 ggccgcgcga ccctggcgga ggtggtcgac gaatcgcggc gggacttgca cgaggtgctc
     3121 gcggagctcc gagcgcacca accctcattg gtgcggtggc tgcgagacgc gagcttcttg
     3181 gagaaggact tcggtccctg cgatgcatgc cccgatggcc ggatggtgcg ccgacgcgcc
     3241 cggaacggct ggtccttcct cggatgcaac cggtttccgg cgtgccgaag acgattgcgc
     3301 ctcagtgccc tcggtcaacg ac
//
LOCUS       DATLMA010000414         2078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_643141, whole genome shotgun sequence.
ACCESSION   DATLMA010000414 DATLMA010000000
VERSION     DATLMA010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643141"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..1142
                     /locus_tag="VNA10_05315"
     CDS             243..1142
                     /locus_tag="VNA10_05315"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HVG37130.1"
                     /translation="MGQRGDEWRLSGEAVEARAPSGMPVGPFPLPALPVDPIANVPWG
                     EITNPALASVSILLPALNEEDGVADVLNRIPRLTLQQKGYAYSVHLLDGGSTDRTRVV
                     AKKLGAEIFVQSGNGKGSAFREFVPKIRGQFAVLLDSDGTYPPEIIPELVGKLGPETP
                     VVLGSRLRGSIGVGAMSMANRVGNRMLSWFASFLFGTPISDVCSGMWGFDSNRLKSLD
                     LTAIGFELEADLFAECALKGIPITEVPIRYDRRIGEKKLHLREGLRIALALLKKRLGS
                     GAAPSKRKPRFSIARLFAEQTDR"
     gene            1233..>2078
                     /locus_tag="VNA10_05320"
     CDS             1233..>2078
                     /locus_tag="VNA10_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37131.1"
                     /translation="MNLLRPRNLVFAFAAYFGVVCYYAWQAARRANGVSYGPAVSITV
                     YQTTMVGGVLVLIGMFITASISPHIRSASPSRSSSSLGALKVIRRLRGDSGRSAVDSR
                     ARGRADSAWPEGDDFLEEPVDSNTSQYRDLEQAQDAAAVSAALSRLVPEGEAPAAGTL
                     AERLSGMRARSSAVLVSEGRQTAGVLLRLVSDMKPLLAAAKKVGLDLPELRRLVAEAA
                     AGHDQDLSQRVRVVEQVKGTLEAALVERIAESLQGVLVDIERMKSATHQVHAAEMIAA
                     EAVALL"
BASE COUNT          370 a          631 c          693 g          384 t
ORIGIN      
        1 cggcaaaacg tgtgccagaa atcagatagc ataccgtttg ctgaataccc gatgagatca
       61 agggccgtgg acacgagggt tcagggcggg gccgggcgga tggcacggct gcgctccaag
      121 gatgtcgaag cgacgctacg ttcgacgtca aggtctcgct cggttccggt gcacggtcgc
      181 tcaatcgaag tccgtcgggt cggtcgtaag gaataaggca aggtttggag gggcaacgtc
      241 ggatggggca acgtggagac gagtggcggt tatcgggaga agctgtcgaa gcgcgtgctc
      301 cgagcggcat gcccgtcggc ccgttcccgc tcccggcgct gccggtcgat ccgatcgcga
      361 atgtcccatg gggagagatc acgaaccccg ccctcgcgag cgtgtcgatt ctcctgccgg
      421 ccctcaacga agaagatgga gtcgcggacg tcttgaatcg gatcccgcgg ctgacgcttc
      481 aacagaaagg ctacgcctac agcgtgcacc tgctcgatgg aggctcgacg gaccgcaccc
      541 gcgtcgttgc gaaaaagctc ggggccgaga tcttcgtgca gagcgggaac ggcaaaggat
      601 ccgcgtttcg ggaattcgtt ccgaaaatcc gcggccagtt cgccgtgctg ttggacagtg
      661 atggcacgta tcctccggag atcatccccg aactcgttgg gaagctcggc ccggaaactc
      721 ctgtcgtcct cggatcacgc ctccggggct cgatcggtgt cggcgccatg tccatggcga
      781 atcgcgtcgg taaccgcatg ttgagctggt ttgcctcgtt cctgttcggc acgcccatct
      841 ccgacgtatg cagcgggatg tggggattcg attcgaatcg gctcaagtcc ctcgacctga
      901 ccgcgatcgg attcgaactc gaagcggacc ttttcgccga gtgcgcgctg aagggcatcc
      961 cgatcaccga ggtcccgatc cggtacgacc ggcgcattgg ggaaaagaag ctccacctgc
     1021 gcgagggcct gcggatcgcc cttgcgctgc tgaaaaagcg actgggctcc ggcgcggctc
     1081 cgtcgaagag aaagccgagg ttctcgatcg cgcgcctctt cgccgagcaa accgaccgct
     1141 aaggcaccca tcgcacatgg gcaagcgatg aaccatgtaa tcgaaacctc tttaagcgcg
     1201 aattccctcg atgcgatcga gggtggggtc gaatgaacct ccttcgtcca cggaatttgg
     1261 tctttgcctt cgcggcatac ttcggcgtcg tctgctacta cgcttggcaa gcggcgcggc
     1321 gggcgaatgg cgtttcatac ggcccggcag tctccattac cgtgtaccag accacgatgg
     1381 tgggaggcgt gttggtcctc atcggcatgt ttatcaccgc ctcgatttcg ccgcacatcc
     1441 ggagcgcttc tccctcccgc tcgtcgagca gcctcggggc cctgaaggtg atccggagac
     1501 ttcggggcga ttccgggcga tctgcggtcg actcccgggc gcgcgggcgc gcggactcgg
     1561 cctggccgga gggcgacgac ttcctggaag agcccgttga ctccaatacc tcgcagtacc
     1621 gagacctcga gcaggctcag gatgccgctg ccgtatcggc tgcgttgtcc cgcttggtcc
     1681 cggagggcga ggcacctgcc gcagggacgc tggcggaacg cctctcggga atgcgggcga
     1741 ggagcagcgc ggtcctcgtc tccgagggga ggcagaccgc gggtgtgttg ctccgtctcg
     1801 tcagcgacat gaaacccctc ctggccgccg cgaagaaggt gggccttgac ttgccggagc
     1861 tccggcggtt ggttgctgag gccgccgccg gccacgacca ggatctctca cagcgcgtgc
     1921 gagtcgtcga gcaggtgaag ggcacgcttg aagccgcgct cgttgagcgg attgcggaat
     1981 cgttgcaagg cgtccttgtc gacatcgagc ggatgaagtc ggcgacgcat caggtgcacg
     2041 cggctgaaat gatcgctgcg gaagccgtcg cgttgcta
//
LOCUS       DATLMA010000415         1903 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_282187, whole genome shotgun sequence.
ACCESSION   DATLMA010000415 DATLMA010000000
VERSION     DATLMA010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282187"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VNA10_05325"
     CDS             <1..357
                     /locus_tag="VNA10_05325"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HVG37132.1"
                     /translation="PPLGYDVTEGRLIPIEDEADIVREMFDLCLNGRTLEETAVELNA
                     NGRRTKLGTSWTPIKVYRILHNPVYAGFLRWDGIVRKADHDSLVAVETFNEAQERLRS
                     RALLSTAHAPPIVLEA"
     gene            361..1089
                     /locus_tag="VNA10_05330"
     CDS             361..1089
                     /locus_tag="VNA10_05330"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HVG37133.1"
                     /translation="MDGRCQRCWSTKNLVSHEVDANPRADPTIRREKVLLCKHCVDGS
                     PSDALLFWEVYMRFGSTREMLQHYASESEDEALQKLCVERNLNEREVLRRARGLQSVE
                     ALNNAVKKANAFLTYASPYGYDYVDGVLQLKNEEARVVSLIFRRYLEGKGIAKICQEL
                     NRDGYRTKTGRAWASQTIANILSNPVYCGLARLNGGIKRGKHEPLIEIDTFNRVQNEM
                     QRRIRRPDQRKADPPQLRLEDYRE"
     gene            1295..1447
                     /locus_tag="VNA10_05335"
     CDS             1295..1447
                     /locus_tag="VNA10_05335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37134.1"
                     /translation="MAKRVKDLTTVQLTTQTRDRLYRLKFRKTYDEFLEELCDLYERS
                     EKGLES"
     gene            1582..>1903
                     /locus_tag="VNA10_05340"
     CDS             1582..>1903
                     /locus_tag="VNA10_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014586422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG37135.1"
                     /translation="MTGWAEKYRPKTLEDVVGNPTAVAELRKWAAAWDKGRPDRRAVI
                     LQGDPGIGKTSAALALASEMGWSAIEMNASDSRNSEAIRKVATRGAVLQTFTETGEFV
                     RSREG"
BASE COUNT          412 a          581 c          601 g          309 t
ORIGIN      
        1 ccgccgctcg gttacgatgt caccgagggc cggctcatcc cgatcgagga cgaggccgat
       61 attgtgcgcg agatgttcga cctgtgcctg aacggccgga cgctcgagga gaccgccgtc
      121 gaactgaatg cgaacggtcg gcggacgaaa ctcggcacct cgtggacgcc gatcaaggtc
      181 taccgcatcc tccacaatcc ggtctacgcc ggtttcctcc gatgggatgg gatcgtccgg
      241 aaggccgacc acgattccct cgtggcggtc gagacgttca acgaagcgca ggagcggctg
      301 cggtcgcgcg cgctcctgtc caccgcgcac gccccgccga tcgtcctgga ggcgtgacgg
      361 atggacggcc gatgtcagcg gtgttggagc acgaagaacc tcgtgagcca tgaggtcgac
      421 gcgaaccccc gcgctgatcc gacaatccgg cgggagaagg tcctcctctg caagcattgc
      481 gtggacggat ctccgagcga cgccctcctg ttctgggagg tctacatgcg attcggatcg
      541 acccgcgaga tgctccagca ctacgcctca gaatccgagg acgaggcgct gcagaagctc
      601 tgcgtggagc ggaatctgaa cgagcgagag gtgctgcggc gggcccgagg gctgcaaagc
      661 gtcgaggccc tgaacaacgc cgtcaagaaa gcgaacgcgt tcctcaccta cgccagcccg
      721 tacgggtacg actacgtgga cggtgtcctc cagctgaaga acgaggaggc ccgcgtggtc
      781 tccctgatct tccgccgcta tctcgaagga aaaggaatcg ctaagatctg ccaggagctc
      841 aaccgagacg gctatcgaac gaagaccggt cgggcctggg cgagccagac gattgcgaac
      901 atcctgagca acccggtgta ctgcggcctc gcccgtctga acggcggtat caaacgcgga
      961 aagcacgagc cgctcatcga gatcgacacg ttcaatcgcg tgcagaacga gatgcaacgc
     1021 aggattcgaa ggcctgacca acgaaaggcc gatccgccgc agctccgact cgaggactac
     1081 cgcgagtagt tcccattgcg gaggtccgct ccgcccgccc tgaagatagc acgcgctcga
     1141 gaatccgggg gaaacgggtg aattcgctgc ctccggcgac ctccatccgt ttacgttcgg
     1201 taatccgagg cggaatgggg accgcgggac gcttcggatt gacaacacat agtactatgt
     1261 gcgcatatag gattatgtgg tcgaggggac caccgtggca aaacgtgtca aggacctaac
     1321 cacggtccaa ctcacgacgc aaactcggga tcggctgtac cgcctgaagt tccggaagac
     1381 gtacgatgag tttctcgaag aactgtgcga cttgtacgaa agatctgaaa agggccttga
     1441 aagctgagtc aagctcccac atatattttc taatatggtc acgtaacagc taaacaaaac
     1501 ctaggtctgc cagaattcgt cggcttcgcc tctcccgctg ataagattat gaccgatcgc
     1561 cccccttccg cgggaggcga catgacgggt tgggcggaga agtatcggcc caagaccctt
     1621 gaagacgtcg tcggaaatcc caccgcggtc gcggaattgc gaaagtgggc cgcggcctgg
     1681 gacaagggtc ggccggacag gcgggcggtc atcctccagg gcgaccccgg gatcgggaag
     1741 accagcgcgg ccctcgcgct cgccagcgag atgggttgga gcgccatcga gatgaacgcc
     1801 tcggacagcc gcaactccga ggcgatccgc aaggtggcca cccgcggggc cgtcctccag
     1861 accttcacgg aaacgggcga gttcgttcgg tcccgcgaag gag
//
LOCUS       DATLMA010000416         1503 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_39724, whole genome shotgun sequence.
ACCESSION   DATLMA010000416 DATLMA010000000
VERSION     DATLMA010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39724"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VNA10_05345"
     CDS             <1..217
                     /locus_tag="VNA10_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase VI subunit B"
                     /protein_id="HVG37136.1"
                     /translation="FVLEGLDEAEYDESDVYVSGINPGLVIGAEPLPGDWELNYAEFE
                     GEEAPAAEAEEEGEIDYDETEEALDDE"
     gene            207..1319
                     /locus_tag="VNA10_05350"
     CDS             207..1319
                     /locus_tag="VNA10_05350"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HVG37137.1"
                     /translation="MTSKKKGSAPAPSKAVDALYAIAEEIYQELDGGQIPKMKIPLRT
                     KANIRFDSKHAVWKYGNLMGVRSAKKLKGALMLLRTMYVLEFIRDMIRDSKSSTLREM
                     YYISEGWDIAKFHAQEESNLLAEDLEVITQLLREDFKLRPEESGASVIGNLTLEEITR
                     NGDRKRINCRDDVGDAGYTIPYNVEKEKVKLIEADAKFILAIETGGMFDRLVENGFDE
                     DAKCILVHLKGQPSRSTRRLLKRLNEELKLPCATFTDGDPWSFRIHASVAYGAIKTAH
                     ISEYLATPTAEFVGITASDILNYELPTDALTSRDVGALNAEMTDPRFNDEFWRNEIQT
                     MLQINKKAEQQALAKYGLDYVTDTYLPEKLGPLGFM"
BASE COUNT          358 a          445 c          460 g          240 t
ORIGIN      
        1 cttcgtactc gaaggactcg atgaagccga gtacgacgag tccgacgtct atgtgagcgg
       61 aatcaacccg ggcctcgtaa tcggcgcgga gccgttgcct ggcgattggg agctcaacta
      121 cgcggagttc gaaggggaag aggcgcccgc cgcagaggcg gaggaagagg gcgagatcga
      181 ctacgacgag acagaagagg cgctcgatga cgagtaagaa aaagggcagt gcgcccgcac
      241 caagcaaggc cgtggacgcc ctctacgcga ttgcggaaga gatctaccag gaactcgacg
      301 gcggccagat cccgaagatg aaaatcccgc tgcggacgaa ggcgaacatc cgtttcgact
      361 cgaagcacgc ggtctggaag tacggcaacc tgatgggcgt gcgcagcgcg aagaagctca
      421 aaggcgccct catgctcctg cggacgatgt acgtcctcga gttcatccgg gacatgatcc
      481 gggacagcaa gtcctcgacc ctgagagaga tgtactacat ctcggaaggc tgggacatcg
      541 cgaagttcca cgcccaggaa gaatcgaacc tcctcgcgga ggacctcgag gtgatcacgc
      601 aactcctccg ggaggacttc aagcttcgac cggaggagag cggcgctagc gtgatcggga
      661 acctgaccct ggaggagatc acccggaacg gcgatcggaa gaggatcaac tgtcgcgacg
      721 acgtcggcga tgctggctac acgatcccat acaacgtcga gaaggagaaa gtcaagctca
      781 tcgaagcaga cgcgaagttc atcctggcaa tcgagaccgg cggtatgttc gaccgtctcg
      841 tggagaatgg cttcgacgag gacgcgaagt gcattctcgt ccacctaaaa ggacagccga
      901 gtcgaagcac tcgacggttg ctcaagcggt tgaacgagga gctgaagctg ccttgcgcga
      961 cctttacgga cggcgatcct tggtcgttcc gtatccacgc atccgtcgcc tacggcgcga
     1021 tcaagaccgc gcatatctct gaatacctcg cgacgcccac cgcggagttc gtcggcatca
     1081 ctgcgagcga cattctgaat tacgaattgc ccacggacgc ccttacctcc cgagacgtcg
     1141 gcgcactgaa cgcggagatg acggacccgc gcttcaacga cgagttctgg cgcaacgaga
     1201 tccagacgat gcttcagatc aacaagaaag cggagcagca ggccctcgcg aagtacggac
     1261 tcgactacgt gacggacacg tacttgccgg agaagctcgg acccctcggc ttcatgtaat
     1321 cgacgacctc atggagactt gtcaaagacg gaaccgaagg tcccttccat ccacatcgtg
     1381 cgttcgcgac ccacgccgtt cgaccggacg tcgaatcgcc acatcggcaa gaggacgagt
     1441 tcaggctccg aatccgtccg cttcgcgccg agggtcgtcc gcacgatgtc ttgggcctgc
     1501 gac
//
LOCUS       DATLMA010000417         2728 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_341761, whole genome shotgun sequence.
ACCESSION   DATLMA010000417 DATLMA010000000
VERSION     DATLMA010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2728
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341761"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /locus_tag="VNA10_05355"
     CDS             complement(<1..956)
                     /locus_tag="VNA10_05355"
                     /inference="COORDINATES: protein motif:HMM:NF024645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HVG37138.1"
                     /translation="MAEGSILDALDALKKLEENLKARDAEFREREAALQEQGSKVEED
                     RRVLDQERTSLADERDSLVGREKGMRAREKELEQSERSIADREQEFGATRQQVLAKEN
                     ALVAREQELAKRLDTLVRREEEFARRDTEAVTHAKDIAARKTEIASRQEQIVKLLEDQ
                     KATLDAQIGRNRELMERERKLAAEEENFAAARAKIAEEGKRLLDREKALLAQEQSIKS
                     MAAAPVSMPAVSARAAPTTPAPQAGIRPQPVPSNPAPVAAKPVAQMPVAVAQVAKPVA
                     KVAVQAEPAAGGESEIPCPACGTMISSDAIMCYACGHRLQDET"
     gene            complement(1022..1741)
                     /locus_tag="VNA10_05360"
     CDS             complement(1022..1741)
                     /locus_tag="VNA10_05360"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37139.1"
                     /translation="MAFRSAIEGLDKVIRSDILPPKVILVTGPPGSMKTSFCYTLMSR
                     YLKDTGEFGLYTTLEETVQSHLRNMESLGVELSMNMQISDFTDLREIDAVVGPEDQTD
                     YLAFIERMIGHYRKVHGHKFKLFALDSLGALYSLMENTNNMRKRMFYFFKMLRDNELT
                     SLVVMERASNGESQLLGNEGFLVDGIVMLGLDRSRGKLVRYLQVEKMRSVDHSMEKHA
                     IEVRKGGLTVLGPIFETGGNS"
     gene            1963..>2728
                     /locus_tag="VNA10_05365"
     CDS             1963..>2728
                     /locus_tag="VNA10_05365"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HVG37140.1"
                     /translation="MCPSCQTDLTLFDIGGGVDPTDTPVKDGRSIDEILASIMEGKED
                     HREIFETLKNVARETPESADVGAAAKSRAVTEAAADLGEQFLCPVCETLVSADATVCP
                     GCGAEFSEGEATEYECPVCKSSVPADALRCPSCGVRFAEDPQTATAPMGKIREPPPVV
                     AAVQMEAPPTRSFAAPTVSGKPARSPLQNRIDQLRRTRREAERRIPTGDRKLLYRELP
                     KLVNEVKPLLVSAKRIGLEIDEGKRIINDAIQAGKGR"
BASE COUNT          448 a          891 c          866 g          523 t
ORIGIN      
        1 gtctcatcct ggagacggtg gccgcacgcg tagcacatga tcgcatcgga cgaaatcatc
       61 gtgccgcagg cgggacatgg gatctccgat tcgccgccgg cagcgggctc agcttggacc
      121 gcgaccttcg cgacaggctt cgccacctgc gcgaccgcga ctggcatctg cgcgaccggc
      181 ttcgccgcta ccggagccgg gttggacggc acgggttgcg gccgaattcc cgcctggggt
      241 gcgggggtcg tcggtgcggc cctcgcggag acggcgggca tcgagacggg agccgccgcc
      301 atggacttga tcgactgttc ctgggcgagc agcgccttct cgcgatcgag gagacgcttc
      361 ccctcttccg cgattttcgc gcgggctgcc gcgaagttct cttcctcggc cgcgagcttc
      421 ctctcgcgct ccatgagttc ccggttccga ccgatctgcg catcgagcgt cgccttctgg
      481 tcttcgagga gcttgacgat ctgctcttgc cgcgaggcga tctcggtctt gcgcgccgcg
      541 atgtctttcg cgtgcgtgac cgcctccgtg tcgcgccgcg cgaactcctc ttcccttctc
      601 acgagggtgt cgaggcgttt cgcgagttcc tgctcgcggg cgacgagcgc gttctctttg
      661 gcgagcacct gttgtctcgt ggcgccgaat tcctgttccc ggtcggcgat ggaccgttca
      721 ctctgctcga gttccttctc gcgggcgcgc attcctttct cgcggccgac gagcgagtcc
      781 cgctcatccg cgagggacgt tcgctcctga tcgaggaccc gccggtcttc ctcgaccttg
      841 gacccctgtt cctggagcgc ggcctcgcgc tctcggaact ccgcgtcccg ggccttcagg
      901 ttttcttcga gctttttcag tgcgtccagc gcgtcgagga tcgatccttc ggccatctac
      961 agtgccctcc gatgtcggtg catggcgccg agcctcccag gcgtcggcgt tggagcgtgt
     1021 ctcatgaatt ccctcccgtc tcgaagatcg gcccgaggac ggtcagcccg cccttccgga
     1081 cctcgatcgc gtgcttctcc atcgagtggt cgaccgatcg catcttctcc acctggagat
     1141 accgaacgag cttcccgcgg gatcgatcga ggcccagcat cacgatgcca tcgacgagaa
     1201 acccctcgtt cccgaggagc tggctctcgc cgttcgacgc gcgttccatg acgacgaggg
     1261 aggtgagttc gttgtcccgg agcatcttga agaagtagaa catccgcttt cgcatgttgt
     1321 tcgtgttctc catgagcgag tagagggcgc cgagcgagtc gagggcgaac agcttgaact
     1381 tgtgaccgtg caccttgcgg tagtggccga tcatccgctc gatgaacgcc aggtagtccg
     1441 tctggtcctc cgggccgacg accgcgtcga tctcccgcag atccgtgaag tcgctgatct
     1501 gcatgttcat cgagagctcg accccgaggg actccatgtt ccgcaagtgc gactggaccg
     1561 tctcctcgag cgtggtgtac agcccgaact cgccggtgtc cttcaggtag cgcgacatga
     1621 gcgtgtagca gaaggacgtc ttcatcgatc cgggcggacc cgtgacgagg atgaccttcg
     1681 gtggcaagat gtcgctccga atcactttgt ccagaccctc gattgcactg cgaaacgcca
     1741 tggccgcgcc ggatacgcat cacacggggg cagggctcac ttaatcgttt tgcgctgatt
     1801 atctgggctg aggacttatc attctctgaa ctgagtccgg aaagtctttg tacgcttatt
     1861 caagatagaa acgcgtcgac gaattcgagg tgtcggctta cgccagcgaa ggaaacgaaa
     1921 gtctgtcccg tctgtgacac accgatcgac gcgaaggcgc gggtgtgccc ttcgtgccag
     1981 acggacctca ccttgttcga catcggcgga ggcgtcgacc cgaccgacac gcccgtgaag
     2041 gacgggcgga gcatcgacga gatcctcgcc tcgatcatgg agggcaagga ggaccatcgg
     2101 gaaatcttcg aaacgctgaa gaacgtcgcc cgagaaacgc cggaatcggc ggacgtcggc
     2161 gcggcagcga aatcccgggc cgtcacggag gccgcggccg acctcggcga gcagttcctg
     2221 tgtcccgtct gcgagacgct cgtctccgcg gacgcgaccg tctgtccggg ttgcggggcc
     2281 gaattctccg agggcgaggc gacggagtac gagtgcccgg tctgtaagag ctcggtcccg
     2341 gccgacgcgc ttcgttgccc gagctgcggc gtccgcttcg ccgaagaccc gcagacggcg
     2401 acggcgccga tggggaaaat ccgagaaccg ccgccggtcg tcgcagccgt ccagatggag
     2461 gctcctccga ctcgttcgtt cgccgcgccc accgtcagcg ggaagcccgc ccggtctcca
     2521 ctccaaaacc ggatcgacca acttcgccgg acccggcggg aagcggaacg tcgaatcccg
     2581 acgggagacc gaaagctcct ctaccgcgag ctcccgaaat tggtgaacga ggtgaagccc
     2641 ctcctggtct ccgcaaagcg gatcgggctc gagatcgacg aggggaagcg gatcatcaac
     2701 gacgcgatcc aggcggggaa aggacgcg
//
LOCUS       DATLMA010000418         2272 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_643604, whole genome shotgun sequence.
ACCESSION   DATLMA010000418 DATLMA010000000
VERSION     DATLMA010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643604"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..483
                     /locus_tag="VNA10_05370"
     CDS             178..483
                     /locus_tag="VNA10_05370"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HVG37141.1"
                     /translation="MRAVLAMDSEVPEGGAMCVTANQKPFALFKVGGKVYCLDNTCTH
                     LGGPLCQGRLQGTIIQCPWHGSRFDVTSGNVVGPPARKSARAYPVAVEGGKIVVELP"
     gene            complement(497..841)
                     /locus_tag="VNA10_05375"
     CDS             complement(497..841)
                     /locus_tag="VNA10_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37142.1"
                     /translation="MASSTAAPFDPMEPFARDDVLREVLDGFETFDYKLYGPIPLRFH
                     RGQATKYEFDLNLGVVHFTEQDFAGLSEIVQRINAKWGTQMTFCVYPSKEKARDMILN
                     VRGSPMAPAEID"
     gene            complement(951..1406)
                     /locus_tag="VNA10_05380"
     CDS             complement(951..1406)
                     /locus_tag="VNA10_05380"
                     /inference="COORDINATES: protein motif:HMM:NF013522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HVG37143.1"
                     /translation="MPMIDVYAPADLFPAGTNSLLGKELTMAVLRAEGVATPGPFHLN
                     NTAAFIHRMDPHAVHTAATDSARTVRVQVITPPAALTREGQKRLVKEITEIVTKVSGD
                     PTQASRTWVILSEAAEGGWGLSGTAFGREEFAALAAKAAAARAKSVTPQ"
     gene            complement(1508..2059)
                     /locus_tag="VNA10_05385"
     CDS             complement(1508..2059)
                     /locus_tag="VNA10_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007414445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HVG37144.1"
                     /translation="MAKPNYQPPRLALPVGERDHIEGPSSARMVLVEYGDYQCPYCGA
                     AYPIVKKVQKELGTKLRFVFRNFPITTSHPEAEWAAETAEAAAAQGRFWEMHDFLYEN
                     QASLGDHGFFTKYEEKLKLDVKRLEQEVAQHVHAGRVREDFMSGVRSGVNGTPTFFIG
                     GARYDGYPGFGPLIAALEKAEKG"
     gene            complement(2071..>2272)
                     /locus_tag="VNA10_05390"
     CDS             complement(2071..>2272)
                     /locus_tag="VNA10_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HVG37145.1"
                     /translation="LLSDFDPKGAISRIYGAFSERNGESARALFVIDPKGIIRWSYLS
                     PDGVNPGADGILSALEKLKSPG"
BASE COUNT          409 a          699 c          716 g          448 t
ORIGIN      
        1 cgcgaggtgc gacccgagac caaatcgacc ggttcagagg ccagccatgg agcaagacga
       61 cgaccgcatc ctttccatga ccggtcgagt cgaaggccag cacgcgcgcg ggattcgccg
      121 accatcatga taaaaccaga cgacaacgac tttacctcgt cccgcgtctc gaggtccgtg
      181 cgcgccgtct tggcgatgga cagcgaggtg ccggagggcg gtgcgatgtg cgtcaccgcg
      241 aaccagaagc cttttgcgtt gttcaaggtc ggcgggaagg tgtactgtct cgacaacacc
      301 tgcacccact tgggtgggcc gttgtgccaa ggccgactcc agggcaccat catccagtgt
      361 ccgtggcacg ggtcgcggtt cgacgtgacg tccgggaacg tcgtcggacc tcccgcccgc
      421 aagtccgctc gggcttatcc cgtcgcggtc gagggcggga agatcgtcgt tgagctacct
      481 tgagcgggag aacgcactaa tcgatctccg caggcgccat cggcgacccg cgaacgttca
      541 aaatcatgtc cctcgctttt tccttcgaag gatagacgca gaacgtcatc tgagtgcccc
      601 acttcgcgtt gatcctctgg acgatctcac tcagccccgc gaagtcctgc tccgtgaaat
      661 ggacgacacc aaggttgaga tcgaattcgt acttcgtcgc ctggcctcgg tgaaatcgga
      721 ggggaatcgg tccgtagagc ttgtagtcga aagtctcgaa accatcgagg acctcgcgga
      781 ggacgtcgtc ccgggcgaag ggctccatgg ggtcgaatgg cgcggcggtg ctgctagcca
      841 tggctcgggc accgtgggcc tccggataaa catgcggcgg gccgattccc gggattcgac
      901 gagtccacgc ttacggagaa gcgattgaag ggcgacggtg caaccgggtg ctactgaggc
      961 gtcacactct tcgcgcgcgc cgcagccgcc ttggcggcga gcgccgcgaa ctcctcgcgg
     1021 ccaaaggccg tccccgagag accccaaccg ccctctgcgg cctcgctcag tatcacccag
     1081 gtgcgactcg cttgtgtcgg gtcgcctgag actttggtta cgatctcggt gatttctttg
     1141 acgagccgct tctggccttc gcgggtcaac gccgccggag gcgtgatgac ctggacacgc
     1201 accgtgcggg cggagtcagt tgccgcggtg tgaaccgcgt gcggatccat tcggtggatg
     1261 aacgccgcgg tgttattcag gtggaagggc ccaggggttg ccacgccttc cgcgcggaga
     1321 acggccatcg tcagctcttt gccaagcagg ctgttggtcc cggccgggaa aaggtctgcc
     1381 ggcgcataca cgtcaatcat cggcatagtc gggcaccaag agagggctgg atttatcgtt
     1441 ttgcactcgt gccagtgctc cttgtggggt gccgactaag aacgattcag ctacgggtcg
     1501 gtcgcggtta acccttctcg gccttttcga gcgcagcgat caagggacca aatccgggat
     1561 agccgtcgta tctggcgccg ccaatgaaga acgtcggcgt cccgttgacg ccgcttcgga
     1621 cgccactcat gaagtcctct cgaaccctgc ccgcatggac atgctgagcg acttcctgct
     1681 cgagccgctt cacatccagc ttgagtttct cctcgtattt cgtgaagaat ccgtggtcgc
     1741 caagcgaggc ttgattctcg tagagaaaat cgtgcatctc ccagaacctc ccctgggcgg
     1801 cggccgcctc ggcggtttcc gcggcccact ccgcttccgg gtgggaggtc gtgatgggga
     1861 agtttctgaa gacgaaccgc agcttcgttc caagttcctt ctggaccttc ttcacgatcg
     1921 gataggccgc gccgcagtag ggacattggt agtccccgta ctcgacgagc accatgcgag
     1981 cactggacgg cccttcgatg tggtcccgtt ctccgacagg cagagccagt ctcggcggtt
     2041 ggtaattcgg cttcgccatg atccctcgct tcagccgggt gatttgagtt tctcgagtgc
     2101 cgagaggatt ccgtccgccc ccggattcac accgtcaggg gagaggtagc tccatcggat
     2161 gatccccttg ggatcgatca cgaacagcgc ccgggccgat tcgccgttcc gttcggagaa
     2221 ggctccgtag atccgggaga tggccccctt ggggtcgaag tcggagagaa gg
//
LOCUS       DATLMA010000419         1484 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_40075, whole genome shotgun sequence.
ACCESSION   DATLMA010000419 DATLMA010000000
VERSION     DATLMA010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40075"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VNA10_05395"
     CDS             complement(<1..458)
                     /locus_tag="VNA10_05395"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HVG37146.1"
                     /translation="MRRGSPFHSRTSALCESWEWRGWAGYLAASSYSLVPEMEYYAIR
                     HSAGLLDVSPLYKYLINGKDALHLVNKVVTRDASKLAKGQIYYTPWCDERGKTVDDGT
                     LWNFGDGSFRMTSAEPNLKWIQDAGMGLDAEVSDVSEEIGALALQGPSSRA"
     gene            583..>1484
                     /locus_tag="VNA10_05400"
     CDS             583..>1484
                     /locus_tag="VNA10_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011522074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG37147.1"
                     /translation="MARGYDAIVIGGGHNGLTTAAYLARAGKKVVVLERRYVLGGAAV
                     TEEVYPGFKFTVCSYVCSLLRPQIIRDLDLPSHGFEVIPQESSFLPLPDGRYLFYRGD
                     EEDTFQAVAKFSRRDAEAMPKFGRLMARMAKFIAPTLTMTPPDVGSFNPSELRKLLAL
                     NKQVQTLTEDELYTFARLMTMSAADYLDEWFETDVVKASLCSSGIIGTMLGPRSPGTA
                     YVLMHHYMGEIDGAYRSWGYVRGGMGMVSESIARAARLFGAEIRVNAEVRRILVQVGR
                     AIGVELTSGEKLYARVIASGADPKR"
BASE COUNT          266 a          484 c          471 g          263 t
ORIGIN      
        1 gctcgggacg agggcccttg aagcgcgagc gccccgatct cttcggagac gtcgctcacc
       61 tcggcgtcca gtcccatgcc cgcgtcttgg atccatttca gattcggctc ggcggacgtc
      121 atccggaagg agccgtcccc gaaattccag agcgtgccgt cgtcgaccgt cttgccgcgt
      181 tcatcgcacc agggcgtgta gtagatctgt cccttcgcga gtttcgacgc atcgcgggtg
      241 acgaccttgt tcacgaggtg aagggcatct ttcccgttga tgaggtactt gtagagtggc
      301 gagacgtcga gcagtcccgc cgagtgccgg atcgcgtaat actccatctc cgggacgagg
      361 gagtatgagg aggccgcaag gtacccggcc caccctcgcc attcccagct ctcgcacaat
      421 gccgacgtgc gcgaatgaaa cggtgaaccg cgccgcacga ttcctcctcc gggcggacgc
      481 ggaccgcgaa taaacgatat aacccctccc ccgttacctc ggccggcccg ccgcgcctcc
      541 tgagtattgc cgacgcgacg cgccttgaac gaggttggca tcgtggcgcg agggtacgac
      601 gccattgtca tcggcggagg ccacaacggc ctcacgacgg ccgcgtatct ggcccgagcc
      661 ggcaagaagg tcgtcgtcct cgagcgccgg tatgtcctcg gaggcgccgc ggtcaccgag
      721 gaagtctacc cgggattcaa attcaccgtc tgctcgtacg tgtgcagcct cctccggccg
      781 cagatcatcc gagatctcga ccttccgtcc cacggcttcg aggtcatccc tcaagaatcg
      841 agcttcctgc ccctgcccga tggacgatac ctcttctacc gcggggacga ggaagacacg
      901 ttccaagcgg tcgccaagtt ctcgcggcgc gacgcagagg ccatgccgaa attcggtcgc
      961 ctgatggccc ggatggcgaa gttcatcgca ccgaccctca cgatgacgcc gcccgatgtg
     1021 ggctccttca atccctcgga actccggaag ctcctggcgc tgaacaaaca ggtccagacg
     1081 ttgacggagg acgagctgta caccttcgcg cggctcatga cgatgagcgc tgccgactac
     1141 ctcgatgagt ggttcgaaac ggatgtggtc aaggcaagcc tatgctcgag cggcattatc
     1201 ggcacgatgc tcgggccgcg ttcacccgga acggcgtacg tgctgatgca ccattacatg
     1261 ggcgagatcg acggcgcgta ccgttcgtgg ggctacgtcc gcggcgggat gggaatggtc
     1321 agcgagtcga tcgcgcgcgc ggcccgcctc ttcggcgcgg agatccgggt gaatgccgag
     1381 gtgcgacgca tcttggtcca ggtcggccgc gcgatcggcg tggaactgac gagcggggag
     1441 aagctctacg cgagggtaat cgcctccggg gccgacccga agcg
//
LOCUS       DATLMA010000420         1057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_40191, whole genome shotgun sequence.
ACCESSION   DATLMA010000420 DATLMA010000000
VERSION     DATLMA010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40191"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..736)
                     /locus_tag="VNA10_05405"
     CDS             complement(158..736)
                     /locus_tag="VNA10_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019065489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HVG37148.1"
                     /translation="MRKVILFVQVSLDGFFEGPKKEIDWHMVDDELHAHVIEELKAMG
                     AFLNGRVTYELMAGFWPTADADPGSTPHVKEFARIWRDMPKVVYSKTLTSAEWNTTIA
                     RDVVRGEVEELKLRARGDLVVGGGDLAAAFMGQDLIDEYRIYVHPIQIGEGKRLFPPS
                     KEKVLLRLAETRTFGNGVVLLRYERLRPRGGS"
BASE COUNT          181 a          357 c          316 g          203 t
ORIGIN      
        1 cccttaggtc gtgtttcgct tgctccggct tagataggtg cggagttcct ccggagcgat
       61 ccggatggcg tttgacacgc gaacgtgagg cagctcgtcg cgctcactga aagacctcgc
      121 ccagctctgg atcgggaccg acggccttcc cgggggacta gctcccccca cggggccgga
      181 gtcgttcgta ccggagaagg acgactccgt tcccgaaagt tcgggtctcg gcgaggcgga
      241 gcaggacctt ctccttcgaa gggggaaaaa ggcgcttccc ctccccgatc tggatcgggt
      301 ggacgtagat ccggtactcg tcgatcaggt cctggcccat gaaggccgcg gccaggtccc
      361 ctcccccgac cacgagatcc ccacgggccc ggagcttgag ctcctcgacc tctccccgca
      421 ccacgtcccg ggcgatcgtg gtgttccatt cggccgaggt gagagtcttc gaatagacca
      481 ccttgggcat gtcccgccag atccgggcga actccttcac gtgtggagtg ctcccggggt
      541 cggcgtcggc ggtcggccag aatccggcca tgagctcgta ggtgacccgt ccgttcagga
      601 aggctcccat cgccttgagc tcctcaatga cgtgggcgtg gagctcgtca tcgaccatgt
      661 gccagtcgat ctccttcttc ggtccctcga agaagccgtc cagggaaacc tggacgaaga
      721 ggatcacctt tctcatcgcg agttctcccg cggttgccaa ggcttcgggc gcccccctgg
      781 aaaataccgg ggccggtggt cttcctcgag caagatacta gaccagtacc cctctgggac
      841 aacgacttcg ccgcgccgtc ggcgtgaatg tccctcaact gaggctggac cgatcgtacc
      901 ggcaacgaga cgggcggagc gtagttacgc cgcgtccagg cgcctacgca agcgccatat
      961 tcagattctc aatcgcctcg tcgatctcgc ccgtgctctt gtagccgacc gtcacgcaat
     1021 cgacgcccgc ctgcctgaac gcaaacttca tcgcctt
//
LOCUS       DATLMA010000421         1551 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_583293, whole genome shotgun sequence.
ACCESSION   DATLMA010000421 DATLMA010000000
VERSION     DATLMA010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583293"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="VNA10_05410"
     CDS             complement(<1..343)
                     /locus_tag="VNA10_05410"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG37149.1"
                     /translation="MVYDVIVVGGGPAGLTAGVYARTRKLSTLILEAQASGGQLEWLY
                     PTKSVYDYPSYIAIEGGELAQLFVLHSRESGAEIRAEEVVDVQRQASGFKLATRQGNV
                     YEGRSIILAMGM"
     gene            531..908
                     /gene="sepF"
                     /locus_tag="VNA10_05415"
     CDS             531..908
                     /gene="sepF"
                     /locus_tag="VNA10_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HVG37150.1"
                     /translation="MAFIKKPFRRLSEGAEADTYIDLGELNFEGEGGALGEPVEHLVK
                     VAEVYRYEDIADLTTHVYNGNILLIDYTSLASDDLALKRITAELKSAVRDCGGDVAVV
                     GKNVLMATPAGIKIDRAKIKGAF"
     gene            complement(909..>1551)
                     /locus_tag="VNA10_05420"
     CDS             complement(909..>1551)
                     /locus_tag="VNA10_05420"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37151.1"
                     /translation="VIAITGPGGSMKTSLALYILIKNRAAGRRGVYVTVEESRESILR
                     TMRHHGLGNEEDFLVDIARLRVEHEGAEEIRDWLRVLKDFLVRRNQREKIDLVVIDTM
                     DVLVSMAHLQDVRNELFHFFHFLRSMGVTTYVIANVDPARGGVANDVSFLADGVFELR
                     FSGAGEGRVQLLFRCAKMRHTNHSRDYFVLTYDKGFAARPYQAPKPSRWSRRT"
BASE COUNT          292 a          488 c          495 g          276 t
ORIGIN      
        1 ccatccccat cgcgaggatg atggaccggc cttcgtagac gttcccttgg cgggtcgcga
       61 gcttgaaacc ggacgcttgt cgctggacgt ccacgacttc ctcggcccgg atctcggcac
      121 cgctctcccg cgaatggagg acgaacaact gcgcgagttc gccgccctcg atcgcgatgt
      181 aactcggata gtcgtacacg gacttcgtcg ggtacagcca ctcgagctgg ccgccgctcg
      241 cctgcgcctc gaggatcagg gtcgacagct tccgggtccg tgcgtacacg ccggccgtca
      301 aaccggcggg gccacccccg acgacgatga cgtcgtagac catgggcgcc agcgacaaag
      361 gcctttccgt cttaaacgtt ggccccgcaa gggtgaccgt ggcacgaaag gtcacggcta
      421 tcttatgatt gaatgaataa ttattgagtg tttcgggaac ccgttcgcaa cgtccgcgat
      481 acctttaaat tcgtggtgtc ggctatgggg cggcgcagaa gggatgtggc atggccttca
      541 tcaaaaagcc attccgacgg ttgtccgagg gcgccgaggc ggatacgtac atcgacttgg
      601 gtgagctgaa cttcgagggc gaaggcgggg ccttgggtga gcccgtcgag cacctggtca
      661 aggtcgcaga ggtgtaccgc tacgaggaca tcgccgacct cacgacccac gtgtacaacg
      721 ggaacatcct gttgatcgac tacacgagcc tcgcgagcga cgatctcgcc ctcaagcgca
      781 tcacggcgga actgaagagc gcggtccggg attgcggcgg ggacgtcgcc gtcgtcggca
      841 agaacgtcct catggcgacc ccggcgggga tcaagatcga ccgggcgaag atcaagggcg
      901 ccttctgatc acgtccggcg actccatcgg gacggcttgg gcgcctggta cggcctcgcg
      961 gcgaagcctt tgtcatacgt caggacgaag tagtcgcgcg aatggttcgt gtggcgcatc
     1021 ttcgcgcacc ggaacagcaa ttggacccgt ccttctccgg cgccgctgaa ccgtagttcg
     1081 aagacgccgt ccgcgaggaa cgagacgtcg ttcgcgacac cgccccgcgc cggatcgacg
     1141 ttcgcgatga cgtacgtcgt cacgcccatc gaccgcagga agtggaagaa atggaacagt
     1201 tcgttccgga cgtcctgcag gtgcgccatc gagacgagca cgtccatcgt atcgatgacg
     1261 acgagatcga tcttctcgcg ctgattccgc cggacgagga agtccttcag cacccgcaac
     1321 cagtcccgga tctcctcggc gccttcgtgc tcgacgcgga ggcgcgcgat gtcgacgagg
     1381 aagtcctcct cgttcccgag gccatggtgg cgcatcgtcc ggaggatcga ctcgcggctc
     1441 tcctcgacgg tcacgtagac gccgcggcga cccgcggcgc gattcttgat caggatgtac
     1501 agcgcgagcg acgtcttcat cgagccgccc ggtccggtga tcgcgatgac g
//
LOCUS       DATLMA010000422         1088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_883272, whole genome shotgun sequence.
ACCESSION   DATLMA010000422 DATLMA010000000
VERSION     DATLMA010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883272"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VNA10_05425"
     CDS             <1..468
                     /locus_tag="VNA10_05425"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG37152.1"
                     /translation="VGVDSHPGMLDRLRERLPRTELIQSRIEDLDLGRRFDLVIAPSN
                     ILYLVERLRGAADHLANSGVLAFELANPHWLRAGGGDGVRVRAFDGNGARLEVDYRLP
                     DGRTITQHADVAIVWPEEIENWLTAAGLQLQRMFARPDAELLDSPSFYVVASR"
     gene            478..>1088
                     /locus_tag="VNA10_05430"
     CDS             478..>1088
                     /locus_tag="VNA10_05430"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HVG37153.1"
                     /translation="MAGHILVVEDDRALRTVLVGALQSGGFEVEPAADGSAGVQALKA
                     KSFDVVLLDIGLPFVDGWHVLSTLEGRRVPSVIVISARGDQADKVRALDMGADDYLAK
                     PFGSDELLARIRAVIRRAQPPVQVPLVVRGADVTVDLQNHSVLRGEQEVRLSATEYLL
                     LAELARHENEVMDYRTLLHRVWGPAYGDERHYLRVFIQRLRLKL"
BASE COUNT          176 a          360 c          357 g          195 t
ORIGIN      
        1 gtcggggtcg atagccatcc cggcatgctc gaccggctcc gagaacggct cccccggacc
       61 gaactgatcc aatcgcggat cgaagacctc gacctcggcc ggcggttcga tctcgtcatc
      121 gcgccctcga acatcctcta cctggtcgag cgtttgcgcg gagccgcgga tcacctcgcc
      181 aattccgggg tcctcgcctt cgagctcgcc aatccgcact ggctgcgggc aggtggcggc
      241 gatggggtcc gagtgcgggc cttcgatgga aatggggcgc gcctcgaggt cgattaccgg
      301 cttcccgacg gacgaaccat cacccagcac gccgacgtcg ccatcgtctg gccggaggag
      361 atcgagaact ggctgacggc cgccggcctg cagctccagc ggatgttcgc gcggccggac
      421 gctgaactcc tcgacagccc gagcttctac gtcgtggcct cgaggtaggg tccggtcgtg
      481 gccgggcaca tcctggtcgt cgaggacgac cgcgcgttga ggacggtatt agtcggcgcg
      541 ctccaatcgg gcggtttcga ggtcgaaccg gccgcggacg ggtcggccgg agtccaggca
      601 ctgaaagcca aatcctttga cgtggtcctg ctcgatatcg gactaccgtt cgtcgacggc
      661 tggcacgtcc tctcgacgct cgaaggccgt cgagtccctt cggtgatcgt gatcagtgcc
      721 cgcggcgacc aggccgacaa ggtccgcgcc ctcgacatgg gagcggacga ctacctggcc
      781 aagccgtttg gctcggacga gctgttggcc cgcatccgtg ctgtaatccg tcgcgcccaa
      841 ccgccggttc aggtgccgct cgtcgtgcga ggcgcggatg tgacggtcga cctacaaaac
      901 cactcggtct tgcgaggcga gcaggaagtc cggctctcgg cgacggagta cctcttgctg
      961 gccgagctcg cccggcacga gaacgaagtg atggattatc gcacgctcct ccatcgcgta
     1021 tggggacctg cctatggcga tgaacggcat tatctgcggg tcttcatcca gcgattgcgc
     1081 ctcaagct
//
LOCUS       DATLMA010000423         2569 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_643790, whole genome shotgun sequence.
ACCESSION   DATLMA010000423 DATLMA010000000
VERSION     DATLMA010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643790"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VNA10_05435"
     CDS             <1..228
                     /locus_tag="VNA10_05435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HVG37154.1"
                     /translation="IHPYTQGLLKSVIHLETKELSSIDGSPPDLVDPPTGCRFHPRCP
                     YAQDICTKEVPALIEYREHQAAACHFGKDFV"
     gene            225..1493
                     /locus_tag="VNA10_05440"
     CDS             225..1493
                     /locus_tag="VNA10_05440"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37155.1"
                     /translation="MIAEPAAPAHAPSSLLEVEDLVVHYPVKMPFLQSLVFRDKPVVH
                     AVDGVNFVLQPGEILGLVGESGCGKTTVGRTVLRLTEPTSGHIRFEGVDITTLKEKQI
                     RPLRTKIQIIFQDPHASLNPAMSIGRAIGHPLEVHGISDDPQEIREAVLAIMREVGLT
                     PAELLYHQYPGDLSGGQKQRAVIARAMILRPKLLVADEPVAMLDMSIRAKVLELMLDL
                     KARHNLTYLFITHDLATAKFVCDRIAIMYLGRIVEIGSAKEIYADPKHPYTRALLAAI
                     PVPDPTKRGPKVLPRGEVPDAIRPPAGCRFHPRCRSVLATCGWEGRDFVEFLEERWLD
                     EKIAQAEANLGPIDEWSYQGLEARRTAPQNVAGLAEIIRRILETGLPAFAAAVSSIGV
                     EEGEIVVRFRTADDLRPKLVEGRMVECLLY"
     gene            1614..2456
                     /locus_tag="VNA10_05445"
     CDS             1614..2456
                     /locus_tag="VNA10_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37156.1"
                     /translation="MPSLDGARAFELSADNLSAFRIAAPKDPNTLPNMLKMGPEAVAF
                     YVSFRLVPDRWGIYVREGALRALKEEYHRIIWRDLGKYADRNVDDVAEKVETTLVLDY
                     LLAHNRIHFLVDRAAAEWEAQEGAAKYAPYQAAWYNPPPKPVLNPEDVGNLEEALANL
                     EAFRQYINPTYADGVAKLVEGRLDERNVNEWKAFFIGGRFAVEMANVLSRQPPGWKDF
                     GKFLNRKTSVGATNYVRIQYSYNPEMLARGQVELSRRLSGRTADAPNLFKVEVPDFPN
                     VYLL"
BASE COUNT          471 a          830 c          823 g          445 t
ORIGIN      
        1 atccacccgt acacccaggg gctcctcaag tccgtcatcc acttggagac gaaggaactc
       61 tcctcgatcg acggatcgcc tccggacctc gtggacccgc cgaccggatg ccgcttccac
      121 ccgcgatgtc cgtacgccca ggacatctgc acgaaggagg tcccggccct gatcgagtac
      181 cgcgaacacc aggccgccgc ctgccacttc gggaaggact tcgtgtgatc gcggagccgg
      241 cggcgcctgc tcacgccccg tcgtcgctgc tcgaggtcga ggacctcgtc gtccactacc
      301 cggtcaagat gccgttcctc cagagcctcg tcttccggga caagcccgtc gtccacgcgg
      361 tggacggcgt gaacttcgtg ctccagcccg gagagatcct cggtctggtc ggggaatccg
      421 ggtgcggcaa gacgacggtc ggccggacgg tcctccgcct gaccgagccg acctcgggcc
      481 acatccgttt cgagggcgtg gacatcacca cgctgaaaga gaaacagatc cgtcccctga
      541 ggacgaagat ccagatcatc ttccaggacc ctcacgcgtc cctgaatccg gcgatgtcga
      601 tcggccgggc gatcggccat cccctcgagg tccacgggat ttccgacgat ccccaggaga
      661 ttcgagaggc cgtccttgcg atcatgcggg aggtgggact tacgcccgcg gaattattgt
      721 accatcagta tccgggcgac ctgagcgggg gacagaagca gagggctgtc atcgcgcgtg
      781 cgatgatcct gcggcccaag ctcctcgtgg cggacgaacc ggtggcgatg ctcgacatgt
      841 cgatccgcgc gaaagtcctg gagctcatgc tcgacctgaa ggcgcgtcac aacctgacgt
      901 acctcttcat cacgcacgac ctcgcgaccg cgaagttcgt gtgcgatcgc atcgccatca
      961 tgtaccttgg aagaatcgtc gaaatcggct cggcgaagga gatctatgcg gatccaaagc
     1021 atccgtacac gcgcgcgctc ctcgcggcga tccctgtacc ggacccgacg aaacggggtc
     1081 cgaaagtcct cccccggggc gaggtcccgg acgcgatccg accgcccgcg ggctgccgtt
     1141 ttcacccccg gtgccgctca gtcctggcga cgtgtgggtg ggagggccgc gacttcgtcg
     1201 agttcctcga agaacggtgg ctcgatgaaa aaatcgctca ggcggaagcg aatctgggcc
     1261 caatcgacga gtggtcgtac caagggctcg aagcccgccg cacggcaccg cagaacgtcg
     1321 ccggcctcgc ggaaatcatc cggcggatcc tggaaaccgg tcttccggcc ttcgcggccg
     1381 ccgtgagctc aattggggtc gaggaaggcg aaatcgtcgt ccgctttcga acggccgatg
     1441 acctgcggcc gaagttggtc gagggccgga tggtcgaatg cctgctctac tgaggccaat
     1501 gccttaaagg ggttccgcac atcgggagcg cgatggaaga tctcgcgggc ttcgcgtccg
     1561 ctcatccagc attttgcgat ccgaaactta ttcgcgtccc gggatatggg ccggtgccct
     1621 cgctcgatgg agctcgggcg ttcgagctca gcgccgacaa tctgtcggcg ttccgaatcg
     1681 cggcgcccaa ggatccgaac acgctcccga acatgctcaa gatggggccg gaggccgtcg
     1741 cgttctacgt gagcttccgg ttggtccccg atcgatgggg catctacgtc cgcgaaggcg
     1801 cgctccgggc gttgaaggag gaataccacc ggattatctg gcgggacctc ggcaagtacg
     1861 cggatcggaa cgtcgacgac gtggccgaga aggtggagac gaccctcgtc ctcgactacc
     1921 tcctggcgca caatcggatc catttcctcg tcgaccgcgc cgcggcggaa tgggaggcgc
     1981 aggagggagc cgcgaaatac gcgccgtacc aggcggcctg gtacaacccg ccgccgaagc
     2041 ccgtgttgaa tccggaagac gtcggaaacc tcgaggaggc gctggcgaat ctcgaggcgt
     2101 tccgacagta catcaatccg acgtacgccg acggcgtcgc caaactcgtg gaaggtcgac
     2161 tcgacgagcg gaacgtgaac gagtggaagg ccttcttcat tggcgggcgg ttcgcggtcg
     2221 agatggcgaa cgtcctttcg cggcagcccc cgggttggaa ggacttcggg aagttcctga
     2281 accgcaagac atccgtgggc gcgacgaatt acgtgcgcat ccagtactcg tacaatccgg
     2341 agatgctggc gcgcgggcag gtggaactga gccggcgtct ctcgggtcgg actgccgatg
     2401 ctccgaacct gttcaaggtc gaggtacccg acttcccgaa cgtctacctc ctgtgaatcg
     2461 ggccgacgga ctcgcgtgcc gggctcatct ttttatcgcg ccttcgactt ccgcgaatat
     2521 ggcgttccgg ggccggctgg atcggggctg gaccctgcac gcctcgttg
//
LOCUS       DATLMA010000424         1058 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_643794, whole genome shotgun sequence.
ACCESSION   DATLMA010000424 DATLMA010000000
VERSION     DATLMA010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643794"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VNA10_05450"
     CDS             complement(<1..410)
                     /locus_tag="VNA10_05450"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HVG37157.1"
                     /translation="MRKTIRALTALAAFGIASFALAGAQARLRGKVTDASGNPVDGAT
                     ITVTTPNLRLFKVTLKSDKKGEYGTILNDATIPYHLKFEKDGFVPMEVDKKVPVGDVG
                     VVDAKLQSTTEAAGHAAAAAPAALSPTDQAALKF"
     gene            complement(546..>1058)
                     /locus_tag="VNA10_05455"
     CDS             complement(546..>1058)
                     /locus_tag="VNA10_05455"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HVG37158.1"
                     /translation="GADLAGNSIGSVTQFAIGCAANPAASDLDVELSKLRAKIEAGAS
                     FAQTQPVYDAGSLERFLACDEAQAIPVLIGLIPLRSLKQTMFFANEVPGIVVPDAIQE
                     RMRRAAEKGTEHEKAEGLAIARELAVAIHQIARGVHVMPMGKYKLAAEILEAIPLEPE
                     SGLRSQVSGA"
BASE COUNT          171 a          349 c          349 g          189 t
ORIGIN      
        1 ttgaacttga gcgcggcctg atcggtcgga gagagagcgg caggggcagc tgccgcggcg
       61 tgaccggccg cctcggtggt cgactggagc ttcgcgtcca cgacaccgac gtcgccgacg
      121 ggcaccttct tgtcgacctc catgggaacg aacccgtcct tctcgaactt caggtggtac
      181 ggaatcgtcg cgtcgttcag gatcgttccg tactccccct tcttgtcgct cttcaaagtc
      241 accttgaaga gacggaggtt gggtgtcgtc accgtgatgg tggcgccatc gaccgggttc
      301 cccgatgcgt ccgtgacttt gcccctcagc cgggcctgcg ctccggccag ggcgaacgag
      361 gcgatgccga acgccgcgag cgcggtgaga gcgcgaatcg tctttctcat ctcatcctcc
      421 agccggcgga ggggcaaacg ccataccgcc gggaacgctg cgaattctat gaaatcgaaa
      481 agggtgctct gccggcgaag gaaacgggcg gatcgggagg ttcattccgc cggggcgtgg
      541 aggtcttacg cccccgagac ctgggagcgc aggccggact cgggctcgag cgggatggct
      601 tccagaatct ccgccgcgag cttgtacttg cccatcggca tcacgtgcac gccccgcgcg
      661 atctggtgaa tcgcgacggc gagctcccgg gcgatagcca gcccctcggc tttctcgtgc
      721 tcggtccctt tctccgccgc cctgcgcatg cgctcctgga tggcatccgg caccacgatt
      781 cccggaacct cgttcgcgaa gaacatcgtc tgcttgagcg accggagcgg aatgagaccg
      841 atcagtacgg gaatggcctg cgcctcgtcg caggcgagga atcgttcgag cgacccggcg
      901 tcgtagaccg gctgcgtctg ggcgaagctc gcgccggctt cgatcttcgc gcgcagcttc
      961 gaaagctcca cgtccaggtc ggacgccgcg ggattcgccg cgcacccgat cgcgaactgc
     1021 gtgacggagc cgatcgagtt gccggcgaga tccgcgcc
//
LOCUS       DATLMA010000425         1064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_40388, whole genome shotgun sequence.
ACCESSION   DATLMA010000425 DATLMA010000000
VERSION     DATLMA010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40388"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VNA10_05460"
     CDS             complement(<1..358)
                     /locus_tag="VNA10_05460"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HVG37159.1"
                     /translation="MAIDDIDLRILDMLQCNGKLSQAKIAGAVGLTTPSVNERIKKME
                     RHGMIKGFVALLDHEKMGLPLTAYIDVSLEHPRFEKSFIDDLERLLAVQECHYLAGDF
                     AYRLKVKASSPGALADF"
     gene            470..958
                     /locus_tag="VNA10_05465"
     CDS             470..958
                     /locus_tag="VNA10_05465"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HVG37160.1"
                     /translation="MKKRDYYEVLGVGKSASEADIKKAYRRLARKLHPDVNPGDKTSQ
                     KKFQEIQEAYDVLKDSEKRRAYDRFGHAASFAGFDAEAAEAAAGFGRGGSPFGAGSPF
                     PNVSYESTDFSELFGNIFGGASRFRTGPENGEPSYGTIEIPFRDAVLGGTASLSIRRE
                     KE"
BASE COUNT          216 a          321 c          330 g          197 t
ORIGIN      
        1 tgaagtccgc gagggcgccg gggctggacg ccttgacctt cagccggtac gcaaagtcac
       61 ccgcgaggta gtggcactcc tgcacggcca gcagcctttc gagatcgtcg atgaaactct
      121 tttcgaagcg gggatgctcc agagagacgt cgatgtaagc ggtcagcggc aggcccattt
      181 tttcgtgatc gagcagcgcc acgaaaccct tgatcattcc gtggcgctcc atcttcttga
      241 tccgctcgtt gacggaggga gtcgtcaagc ccacggcgcc cgcgatcttc gcctgcgaca
      301 gcttgccgtt gcactgcaac atgtcgagga ttcggagatc gatgtcgtcg attgccaatc
      361 cgtcctcgcc ttatagaatt agatagcaga agagttgcga ctaataatat tagactctcg
      421 tcgcgtatcc aagtcttagt ttcggcctga ctataatcgc gccaaaccga tgaaaaagcg
      481 cgattactac gaggttttgg gcgtcggcaa gagcgcatcc gaggccgaca tcaagaaggc
      541 ataccggcgg ctcgcccgaa agctccatcc cgacgtcaac ccgggcgaca agacgtctca
      601 aaagaagttc caggaaatcc aggaggccta cgacgtcctg aaggattccg agaagcgccg
      661 cgcctacgac cgcttcggac acgcagcttc cttcgccggt ttcgacgccg aagccgccga
      721 agcggccgcc ggattcgggc ggggcggatc gccgttcggc gcgggatccc cgtttcccaa
      781 cgtgtcctac gagtccaccg atttctccga gctcttcgga aacatctttg gcggcgcgtc
      841 ccggtttcgg accggccccg agaacggaga gccgtcgtac ggaacgatcg agatcccgtt
      901 ccgggatgcc gtgctcggag gcacggcgtc gctttcaatt cggcgggaga aagaatgacc
      961 gacgtgcggc ggatcggggc ggaccggccg cacggtctgc gcgacgtgcc ggggaacggg
     1021 caaagttgcc gaggccgaac gggtgcggat ccggattccc gagg
//
LOCUS       DATLMA010000426         2514 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_644010, whole genome shotgun sequence.
ACCESSION   DATLMA010000426 DATLMA010000000
VERSION     DATLMA010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644010"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="VNA10_05470"
     CDS             complement(<1..1136)
                     /locus_tag="VNA10_05470"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing serine/threonine-protein
                     kinase"
                     /protein_id="HVG37161.1"
                     /translation="MTLSLPCTLKGRKGRYQVLSKMTEGGMSTIYVGKSNRGVPVIVK
                     EASGVDLAQSDERLRIEAEILRTLSSPGHPRVVRYLDVGSNLGPFCLVEEQLEGETLA
                     ERYKDTPADAATATRHIVQLLEALSYLHARNVIHRDVKPKNIILDAHREVVLIDFGAA
                     KKEFHQFTGSGTVIYTPGWGAPEQNLGEATPASDLYSVGAVLFFLLTAKDPQASMKQL
                     AAGKSELFRSPRDLEPSVPSELSDVVTRAMSFDPKARFPTAADMAQAISGGSGESLEF
                     PHLVVLGKKCRVKREMEIGRDHKSCDQGCTKKGFGHPPEIGILDAERYLSKHHARILK
                     DGKGRCWIEDLGSLNGTAMSHDGGRTYRQIPGFKREKLTDGDVVA"
     gene            complement(1151..1828)
                     /locus_tag="VNA10_05475"
     CDS             complement(1151..1828)
                     /locus_tag="VNA10_05475"
                     /inference="COORDINATES: protein motif:HMM:NF024637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HVG37162.1"
                     /translation="MTKCSACDSENREGARFCDACGAKIEPEAESSELKLAAMPAEDE
                     GLAPPTNEDLGAVDSMFGPDAGEPEPTAGPEPPAADVTEPEGESSPDLADVEDESPAE
                     ATEPEEELPAEPPKAGYLVFPDDTEQPIPPSQWLIGRTDLAKFLPDPKKANEISRGHL
                     TVFQEGDRFFVEDGTTMVQRKPSTNKTWLVRGTSRILVTGTGRTELQNDDEIDVAELV
                     TLQFVVR"
     gene            complement(1834..>2514)
                     /locus_tag="VNA10_05480"
     CDS             complement(1834..>2514)
                     /locus_tag="VNA10_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37163.1"
                     /translation="SGGGLWHHIVDARADLPQIFQDQAAQMAGTVVSNPELKVSIMPG
                     SELADAYTVRPVLNRLPRPKFDGAAFTVPLRDLIAGEEQTLVFRIGVPSRPAGKATLL
                     RFSLVEVTQDVDVAFTDDQRLWSMETNPYPRTLLSSAEATVLMQRAVQSRDATALQKA
                     ETIMRTMATDAGAATAIRANPTLSDVATTMRDAQATVARSGLQLSEAAKKDFLQATTI
                     IGKKKPKR"
BASE COUNT          371 a          830 c          807 g          506 t
ORIGIN      
        1 gcgacgacat ctccgtcggt gagcttttcc cgtttgaatc ccgggatctg ccgataagtc
       61 ctcccgccgt cgtgggacat cgcggtgccg ttcaggctcc cgaggtcctc gatccagcag
      121 cggcctttcc catccttcag aatccgggcg tgatgctttg acaggtaccg ttccgcatcg
      181 aggatgccga tctccggcgg gtgtccgaag cctttcttcg tgcaaccttg gtcgcacgac
      241 ttgtggtctc ggccgatctc catctcccgc ttgacgcggc acttctttcc cagcaccacg
      301 aggtgtggga actcgagcga ctcccccgac cctccggaga tcgcctgcgc catgtccgcc
      361 gccgtcggaa accgtgcttt cgggtcgaac gacatggccc tcgtcacgac atccgagagc
      421 tccgagggga cgctgggctc gaggtcgcgc ggggaccgga agagttcgga tttcccggcc
      481 gcgagctgtt tcatcgaggc ttggggatct ttggcggtga ggaggaagaa caggacggcg
      541 cccacgctgt agaggtcgct cgccggcgtc gcctctccca gattttgctc cggggcgccc
      601 cagcccggcg tgtagatgac ggtgccggat ccggtgaact ggtggaactc cttcttcgcc
      661 gcgccgaagt cgatgaggac gacctctcgg tgagcgtcga ggatgatgtt cttgggcttc
      721 acgtcccggt ggatcacgtt ccgcgcatgg aggtacgaca gcgcctcgag gagctggacg
      781 atgtgtcgcg tcgcggtcgc cgcatcggcc ggcgtgtcct tgtatcgctc cgccagcgtc
      841 tcgccttcga gttgttcctc cacgagacag aacggtccga ggttgctgcc tacgtccaga
      901 tatcggacga ccctcggatg gccgggcgag ctcagcgtgc gcaggatctc ggcttcgatc
      961 cggagtcgtt cgtcggattg ggcaaggtcg acgccgctgg cctccttcac gatgacgggc
     1021 acgccgcggt tggacttgcc gacataaatg gtcgacatcc cgccttccgt catcttgctg
     1081 aggacctgat agcggccctt ccgacctttc aaggtgcagg gaagggagag ggtcataccg
     1141 ttcgcaggcc ctatctcacg acgaactgca gcgtcaccaa ttccgcgacg tcaatctcat
     1201 cgtcgttctg gagctcggtg cgacccgttc cggtgacgag gatgcgagag gtccctcgga
     1261 ccagccacgt cttgttcgtg ctgggcttcc gttgcaccat cgtcgtgccg tcttcgacga
     1321 agaaccgatc gccttcctgg aagaccgtga gatgccctcg cgaaatctcg ttcgccttct
     1381 tcgggtcggg cagaaacttc gccaggtccg tgcggccgat caaccactgg gacgggggaa
     1441 tcggctgttc tgtgtcgtcc ggaaagacca ggtagccggc cttgggtggc tcggccggga
     1501 gctcttcctc gggctccgtt gcctcggcgg ggctttcgtc ctcgacgtcc gccaggtcgg
     1561 gggagctttc gccctccggt tccgtcacat cggcggcggg aggctccggt ccagcggtgg
     1621 gttccggctc accggcgtcc gggccgaaca tcgaatcgac ggcgcccagg tcctcgttcg
     1681 tcggaggggc caggccttca tcctcagccg gcatcgcagc gagcttcagt tcggagctct
     1741 cggcttcagg ctcaatcttc gcaccgcacg cgtcgcagaa ccgtgcgcct tccctgttct
     1801 cgctgtcgca ggccgaacac ttggtcacgt tcatcaccgc ttcggtttct tctttccgat
     1861 aatcgtcgtc gcttgcagga agtccttctt cgccgcctcg ctgagctgga gcccgctccg
     1921 ggccacggtc gcctgcgcgt cccgcattgt cgtcgcgacg tcgctcagcg tggggttcgc
     1981 gcgaatcgcg gtcgccgcgc cggcatccgt cgccatggtc cgcatgatcg tctccgcctt
     2041 ctggagcgcc gtcgcatcgc gcgactgcac cgcccgctgc atgaggacgg tggcctccgc
     2101 ggaactcaag agcgtgcgcg ggtacggatt ggtctccatg ctccagaggc gctggtcgtc
     2161 ggtgaacgcc acgtcgacgt cttgggtcac ctcgaccaag gagaaccgaa gcaaggtggc
     2221 cttccccgcg ggccgtgacg ggaccccgat acggaacacc agggtctgct cctcacctgc
     2281 gatcaggtcg cggagcggca ccgtgaaggc ggccccgtcg aacttcggcc gggggagtcg
     2341 gttcaggacc ggcctgacgg tataggcatc agccagctcc gagccgggca tgatcgagac
     2401 cttcaactcg ggattcgaga cgacggtgcc cgccatctgg gccgcctggt cctggaaaat
     2461 ctgggggagg tcggctcgcg catccacgat gtggtgccac agccctccgc cgga
//
LOCUS       DATLMA010000427         1814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_342344, whole genome shotgun sequence.
ACCESSION   DATLMA010000427 DATLMA010000000
VERSION     DATLMA010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342344"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..>1814)
                     /locus_tag="VNA10_05485"
     CDS             complement(151..>1814)
                     /locus_tag="VNA10_05485"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008180365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HVG37164.1"
                     /translation="RRCRGMNAAQLLIACLESEGVRFAFGIPGEENLELMDALRGSSV
                     RFVLTRHEGAAAFMADVYGRLSGRAGVCLATLGPGATNLVTGVADAFLDRAPLVAITA
                     QANLSKIHRESHQYVDILQLFSRITKWNARVESPDVVPEIVRKAFKLAEAEKPGSTHI
                     ELPENVAGDEAEPHQKPLPREPVSAPTPARASVEQAALLIEKAKKPIILAGNGVIRNG
                     SSTELTEFAERLQIPVVTTVMGKGAIPWTSPMSLLTIGILPRDYELAGFEDSDLVICI
                     GYDFVEYDPRTWNSGGDRRIVHIDALPAEISAHYLPEVEVIGEIRESVQALGQRVRKT
                     RTSSRSVPSSQTIRKTLESELGVHGEKLLNPRRILWSLRDLLEPDDLLISDVGAHKLW
                     LSRFFRVVKPKTVIISNGLSPMGIALPGGIAAKLLDPDRRVVTLSGDGGFIMSVHELE
                     TARRERAATVNLVFRDGGLGSIRWKQMAKFQRTVGTDFGNPDFQELAKAFGVRGFEVN
                     HPSELNSVLAEAFESNAPCVVDIPVDYGENPFLDLRGSQKRPGSL"
BASE COUNT          315 a          581 c          579 g          339 t
ORIGIN      
        1 tgacatggaa cctgtgattt aggaccggaa gcgctctcgg tcgaactgag acgcgtcggg
       61 cctccgtgac ccgatgccga cgggagcgcc atcccctttt gacgggcacc aagtcgggcg
      121 tttccgtgac gctacggacg accgaatccg tcagagcgag ccgggtctct tctgggatcc
      181 cctgaggtcg aggaatggat tttccccgta gtccacaggg atgtccacca cacacggagc
      241 gttcgattcg aacgcctccg caaggacgga attcagttcc gatggatgat tgacctcgaa
      301 gccccgaacg ccgaaggcct tcgcaagttc ctgaaagtcc ggatttccga agtcagtccc
      361 gacggttcgc tggaacttgg ccatctgctt ccatcggatg ctcccgagtc caccgtcccg
      421 gaagaccaga ttcacggtgg cagcgcgctc ccgtctcgcg gtctccagct cgtggacgct
      481 catgatgaac ccgccgtccc cgctcagcgt gaccacccgg cggtccgggt ccagcagctt
      541 tgcggcgatg ccgcccggga gcgcgatgcc catgggagaa aggccgttcg agatgatgac
      601 cgtcttgggc ttcacgactc gaaagaaccg gctcagccag agcttgtgcg cgcccacgtc
      661 cgagatgagg aggtcgtccg gttcgaggag gtcgcgaagg gaccacagaa tccggcgcgg
      721 gttcaggagc ttctccccgt gaacgccgag ttccgattcc aacgttttcc ggatcgtctg
      781 cgaggatgga accgagcggc tcgatgtccg agtcttccgg acgcgctgtc ccaaggcctg
      841 aaccgattcg cggatttccc cgatgacttc gacctcgggg aggtagtgcg ccgaaatttc
      901 cgcggggagc gcatcgatgt gaacgatccg tcggtccccc ccggagttcc aggtgcgcgg
      961 gtcgtactcg acgaagtcgt atccgatgca gatgaccagg tcggagtcct cgaatcctgc
     1021 gagctcgtag tctcggggga gaatcccgat cgtcaggagg ctcatcggcg acgtccacgg
     1081 gatcgctcct ttccccatga ccgtcgtcac gacggggatc tggaggcgct cagcgaactc
     1141 cgtcaactcg gtggaagacc cgttccgaat cactccgttc ccggcgagga tgatcggctt
     1201 cttcgccttc tcgatcagga gggcggcctg ctcgacgctc gctcgggcgg gggtgggggc
     1261 gctgaccggc tcccggggga gcggcttctg atgcggctcc gcttcgtctc ccgccacatt
     1321 ctccggtaac tcgatgtggg tggaaccggg cttttccgcc tcggccagct tgaacgcctt
     1381 gcgtacgatc tcggggacga cgtccgggct ctccacgcgg gcattccatt tcgtgattcg
     1441 actgaacagc tggaggatgt cgacgtactg atgggactcc cggtggatct tcgacagatt
     1501 cgcctgcgcg gtgattgcga cgagcggcgc ccgatccaga aaggcatcgg ccacaccggt
     1561 cacgaggttc gtcgccccgg gtccgagggt cgcgaggcag acgccggcgc ggccagagag
     1621 acggccatag acatccgcca tgaacgccgc tgcgccttcg tgtcgcgtca ggacgaaccg
     1681 gaccgagctt ccccggagtg cgtccatcag ctcgaggttc tcctctcccg gaatcccgaa
     1741 ggcgaaacgg acgccctcgc tctcgaggca ggcgatcaag agttgagcag cgttcatgcc
     1801 cctgcaccgg cggt
//
LOCUS       DATLMA010000428         1101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_342461, whole genome shotgun sequence.
ACCESSION   DATLMA010000428 DATLMA010000000
VERSION     DATLMA010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342461"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VNA10_05490"
     CDS             <1..659
                     /locus_tag="VNA10_05490"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37165.1"
                     /translation="WLTGQQFVETLLRLDGMPAAKARKEATEALKVVGLSEAAQRPTR
                     GYSRGMRQRAKLAQALAHNPEILILDEPLSGADPAGRVHILQTISDFAKDGGHVLMST
                     HVLYEIERVTNNIVLIHNGKAIAAGNIHAIRALIDTHPHAVRIETSKPRQLAQALARM
                     EHVVSFEFPAADTLLVRTRKPDTFYKELPQIVSDTKLDVRGLESPDDSLDAVFRYLVG
                     "
     gene            664..>1101
                     /locus_tag="VNA10_05495"
     CDS             664..>1101
                     /locus_tag="VNA10_05495"
                     /inference="COORDINATES: protein motif:HMM:NF024141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37166.1"
                     /translation="MDWTGSFRKAWVVTGLTLRYLLTTRRAIATGLLALVPLILTLSL
                     AAARVVTFDIVLFQQLMIPLFLQVVLIFVTLVNATALIREEIDDNTLPFLLTRPISKP
                     ALVGYKYIGYLVAVLVVLIPPIIVAYGVTEAYGGLPFTADLDVL"
BASE COUNT          196 a          390 c          317 g          198 t
ORIGIN      
        1 gatggctcac gggacagcaa ttcgtcgaga cgcttctgcg actcgacgga atgcccgcgg
       61 cgaaggcacg caaggaggcc accgaggccc tgaaggtcgt cggcctctct gaggcggccc
      121 agcggccgac ccggggttac agccgaggga tgcgccagcg cgcgaagctc gcacaagccc
      181 ttgcccacaa cccggagatc ctgattcttg acgagcctct ctccggggcg gaccctgcgg
      241 gccgcgtcca catcctccag acgatctccg acttcgccaa agacggcggc cacgtgttga
      301 tgtcgaccca tgtcctgtac gagatcgaac gggtcacgaa caacatcgtc ctcattcaca
      361 acggcaaggc aatcgcggcg ggcaacatcc acgcgatccg cgcgctcatc gacacgcatc
      421 cgcatgcggt gcgcatcgag acgtcgaaac cgcggcagct cgcccaggcc ctcgcgcgca
      481 tggagcacgt cgtctccttc gagttcccgg ccgccgacac gctcctcgtc cgcacccgca
      541 agcccgacac gttctacaag gagctccctc agatcgtctc ggacacgaag ctcgacgtcc
      601 gcggactcga gagtccggac gacagcctcg acgccgtgtt ccggtatctc gtcgggtgat
      661 ggaatggatt ggacgggatc tttccggaag gcgtgggtcg tcaccggcct gaccctgcgc
      721 tacctgctga cgacccgccg cgcgatcgcg accggccttc tggcgttagt gcctctgatc
      781 ctcacgctct ccttggccgc cgcccgtgtc gtcacgttcg acatcgtact cttccaacag
      841 ctcatgatcc cgttattcct gcaagtcgtc ctgatcttcg tgacactggt gaacgcgacg
      901 gcgttgatcc gcgaagagat cgacgacaac accttgccgt tcctcctgac ccggccgatt
      961 tcgaaaccgg ccctggtggg atacaagtac atcggctacc tcgtcgcggt cttggtcgtc
     1021 ctcatccccc cgatcatcgt ggcctacggc gtgacggagg cgtacggagg cctcccattc
     1081 accgcggacc tcgacgtatt g
//
LOCUS       DATLMA010000429         1523 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_828400, whole genome shotgun sequence.
ACCESSION   DATLMA010000429 DATLMA010000000
VERSION     DATLMA010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828400"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..502)
                     /locus_tag="VNA10_05500"
     CDS             complement(59..502)
                     /locus_tag="VNA10_05500"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG37167.1"
                     /translation="MHRRSVDGRIMGFRYTGIRVRDLDRSITFYTTVLGMRVTWRMKI
                     RETGGEIAVLKSPRGTQRLELNWYPPRGRYRGYRQGDELDHLAFAVPDVDAFLRDHRG
                     DFRVVMKTFDEGTDRLAYVTDPDGAWIELMSRRKPRAKPGAGASD"
     gene            complement(549..1214)
                     /locus_tag="VNA10_05505"
     CDS             complement(549..1214)
                     /locus_tag="VNA10_05505"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37168.1"
                     /translation="MKIEHCEFPDDLLYDPEGLVWARLLESGDVLVGITSIHAALAGP
                     VAKVSAKPLAASYPRHAAIGFLESGKYFGPIRTPVRGVLREVNTAVLARPRTLTDASY
                     DAGWFARLQPTNFHEDGRVLRSATDAHDGLTKQIAALRVRCFAAFPDHEMFEIGIECS
                     AVLAKLNELLTRIEVGGVVHLVTDDPTSPIEMVRWSDQTGQPVIDQRKEGNLFHFLVR
                     KVK"
     gene            complement(1211..>1523)
                     /locus_tag="VNA10_05510"
     CDS             complement(1211..>1523)
                     /locus_tag="VNA10_05510"
                     /inference="COORDINATES: protein motif:HMM:NF037012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HVG37169.1"
                     /translation="KADRTNRFLPLVSNEDRGGLTILSDARVLSSFLEAGKKISHRLE
                     EHRGAYLYVLGGGPVQVNEEAVPSLGAVKLTDESEVSVRSGGDAELLLADVLALEDLS
                     P"
BASE COUNT          280 a          504 c          474 g          265 t
ORIGIN      
        1 cggaaagatc gtcggacgcg cggtgctatt cccaggaccc atggattcgt aggcgaagct
       61 agtcggacgc gccggccccg ggtttcgccc gaggcttccg ccgagacatg agctcgatcc
      121 acgccccgtc cggatcggtg acgtacgcga ggcggtccgt cccttcatcg aacgtcttca
      181 tgacgacgcg gaagtcgccc cggtggtctc ggagaaacgc gtcgacatcc gggaccgcga
      241 aggccaggtg gtcgagttcg tccccttgcc gatacccgcg atagcggcct cggggcggat
      301 accagttcaa ttcgagacgt tgcgtcccgc gcggggactt gaggaccgcg atttcaccgc
      361 ccgtttcgcg gattttcatg cgccacgtca cccgcattcc caggacggtc gtgtagaagg
      421 taatcgaccg atcaaggtcc cgcacccgaa tccccgtgta ccggaagccc atgattcgcc
      481 catcgacaga acggcggtgc aaccaatgaa cgttcacccg ccacatgcgg gttgggcggc
      541 cccggtggtc acttcacctt gcggacgagg aagtggaaca ggttcccttc cttccgctga
      601 tcgatgaccg gctgtccggt ctggtccgac catcggacca tctcgatggg cgacgtggga
      661 tcgtccgtca cgaggtggac gacgccccca acctcgatcc gcgtgagcag ctcgttcagc
      721 ttcgcgagga ccgcggagca ctcgatgcca atctcgaaca tctcgtgatc ggggaatgcg
      781 gcgaagcacc ggactcgcaa cgcagcaatc tgcttcgtga ggccgtcgtg cgcgtccgtt
      841 gccgaacgca agacccgccc gtcctcgtgg aaattcgtcg gctgcaagcg agcgaaccat
      901 ccagcatcgt acgaagcgtc ggtcaacgtt cgaggccttg ccaaaacagc ggtgttgact
      961 tcgcggagaa caccgcgaac gggcgtgcgg atcggcccga agtacttccc gctctccagg
     1021 aatccgatcg cggcatgccg cgggtacgat gcggcgagcg gtttcgcgga gactttcgcg
     1081 accgggccgg cgagcgcggc gtggatgctc gtgatgccca cgagcacgtc tccggattcg
     1141 aggagccgcg cccatacgag tccctccggg tcgtacagaa ggtcgtccgg gaactcgcag
     1201 tgttcgattt tcatggagaa agatcctcaa gcgcgaggac gtccgcgagg agaagttccg
     1261 cgtcccctcc ggaccgtacg ctcacctcgg actcgtcggt gagcttcacc gcgccgaggg
     1321 acggaaccgc ttcttcgttg acctgcaccg gcccgccgcc gagcacgtag agatacgcgc
     1381 cgcgatgctc ctcaagccgg tgcgaaatct tcttgcccgc ctcgaggaac gaggacaaca
     1441 cgcgcgcatc cgacaggatc gtcaagcccc ctcgatcctc gttcgagacg agcggcagga
     1501 accggttcgt ccgatccgct ttc
//
LOCUS       DATLMA010000430         2185 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_163630, whole genome shotgun sequence.
ACCESSION   DATLMA010000430 DATLMA010000000
VERSION     DATLMA010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163630"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VNA10_05515"
     CDS             complement(<1..371)
                     /locus_tag="VNA10_05515"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HVG37170.1"
                     /translation="MADKKPTKADLTSVPIQHLDLEKTQTVADLVEGYKHISFQARTL
                     GMCASVLENMMTDPKCTVFFGGAGALTPGGLKKVMRDMVEFGLVDVVVTTGAIAYHDF
                     YEAHGYHHYRSSPDADDIVLR"
     gene            complement(413..628)
                     /locus_tag="VNA10_05520"
     CDS             complement(413..628)
                     /locus_tag="VNA10_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37171.1"
                     /translation="MGTESEKRIIMRIDPNDESITLKDIMQRIQEIQRQHPDLDVFFD
                     GDEYAVCSRPKEKARAIAEAVEGRKKS"
     gene            855..>2185
                     /locus_tag="VNA10_05525"
     CDS             855..>2185
                     /locus_tag="VNA10_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37172.1"
                     /translation="MAVKPAEGTVSQVCRVCGGEVNPHGECVVCGTKQSDPPKTEDPG
                     TAAWLKGESDGGLNAWIGASVAGGDSKDEALRKWLAGEDTAFQDWIGVPTVTGGAKSA
                     RTPAERVSDDKVRELRTKALEVDGLHAELESMRATLNRELANFRQGKFDPVKYIEETA
                     NLSKQLQTEIAKRRELEQDIEHIKKGSIAVIKYVKTQQLKAGTSPEMKKRLDQETKAR
                     QALEGDLGEQRSVNEQLRKQLEAGLGKLKPDQRELKKRELDLAEREAAFRAKEDRLAS
                     MPAGEGGAPSEELKRRFEEELREMAEDYLAKEEEFKKRIIGLEEAVGKYKIEDKVRAE
                     ARVLEGKPKAEVQAAFSKKEQEVLHKEKMILMREQELQRLQADLQAKEDEIKKVKEPL
                     TYKEEELLRREEDLVYREKVIQAEQRKMEAAKAQGGSVEELDMKSRLEELKG"
BASE COUNT          471 a          643 c          733 g          338 t
ORIGIN      
        1 tcccgcagga cgatgtcgtc cgcgtccggg gacgaccggt agtggtggta cccgtgcgcc
       61 tcgtaaaagt cgtgatacgc gatcgcgccc gtcgtcacga cgacgtcgac gaggccgaac
      121 tccaccatgt cgcgcatcac tttcttcagg ccgcccggcg tgagggcccc ggcgccgccg
      181 aagaaaaccg tgcacttcgg gtccgtcatc atgttctcca ggacggaggc gcacatgccc
      241 aaggtccgcg cctggaatga gatgtgtttg tagccctcga cgaggtccgc gaccgtctgc
      301 gtcttctcga ggtcgaggtg ttggatcggc accgacgtga ggtccgcttt cgtgggcttc
      361 ttgtccgcca tgcgcggcgc tatgcggccc ccggccaaaa ggcttcggtc gctcacgact
      421 tcttgcggcc ctcgacggcc tcggcgatcg cgcgagcctt ctctttcggc cgcgagcaaa
      481 ccgcgtactc gtcgccgtcg aagaacacgt cgaggtccgg atgttgccgt tggatttctt
      541 ggattcgctg catgatgtcc ttgagggtga tcgactcgtc gttcgggtcg atccgcatga
      601 taatccgctt ctcgctctcc gtccccaagg cccgcccgtc ctccggactc gtcgagaccg
      661 tcagactcgt ccgtccgtat aaatactatt ccggactcga gacgcacacg cgccgcatcg
      721 ttctccggga gcgcggaaag attgttcgat gatattgagg tggctacgat taaataccct
      781 cggctcgcgt agcgagtccc aaccggttct tccgggtcgg tcgtgctagc gatgctcagg
      841 gaggcacagg cccgatggcg gtgaaacccg cagagggcac tgtctcgcag gtctgccgcg
      901 tgtgcggggg cgaagtcaat ccgcacggcg agtgcgtggt ctgcggcacg aagcaatcag
      961 atcctccgaa gacggaggac cccgggaccg ccgcgtggct caagggcgaa tcggacggcg
     1021 gactgaatgc gtggatcggc gcatcggtgg ccggcggaga ttccaaggac gaggcgctcc
     1081 gcaagtggct cgcgggcgag gacacagcgt tccaagattg gatcggggtt cccacggtca
     1141 caggcggagc gaagtccgcg cggactccgg ccgagcgcgt gtccgacgac aaggtccgcg
     1201 agctgaggac gaaagccctc gaggtggacg gcctccacgc cgaactcgaa tcgatgcgcg
     1261 ccaccttgaa ccgcgaactc gcgaacttcc ggcagggcaa gttcgatccg gtcaagtaca
     1321 tcgaggagac cgcgaacctc tcgaaacagc ttcagacgga gatcgcgaag cgacgggagc
     1381 tggagcagga catcgagcac atcaagaaag gctcgatcgc ggtcatcaag tacgtcaaga
     1441 cccaacagct caaggccggc acctcgccgg agatgaagaa gcgcctcgac caggagacga
     1501 aggcccgtca ggccctcgag ggcgacctcg gcgaacaacg atccgtgaac gaacagcttc
     1561 gcaagcaact cgaagccggc ctagggaagc tgaagcccga ccaacgggaa ctgaagaagc
     1621 gggagctgga cctcgcggag cgcgaggcgg cgttcagggc gaaagaggac cgcctcgcat
     1681 cgatgccggc cggagaaggc ggggcgccga gcgaggaact gaaacgccgg ttcgaggaag
     1741 agctccgcga aatggcggag gactacctcg cgaaggagga agagttcaag aaacgaatca
     1801 tcgggctcga ggaggcggtc gggaagtaca agatcgagga caaagtccgc gcggaggcgc
     1861 gggttcttga gggcaagccg aaggccgagg tgcaggccgc gttctcaaag aaagagcagg
     1921 aagtccttca caaggagaag atgatcttga tgcgggaaca ggagctccag cgcctccagg
     1981 cggacctgca agccaaggag gacgagatta agaaggtgaa ggagccgctc acttacaagg
     2041 aggaagagct gctccgccgg gaagaagacc ttgtctaccg cgaaaaagtc atccaagcgg
     2101 agcaacgcaa gatggaggcg gcgaaggccc aaggcggctc tgtcgaggaa ttggacatga
     2161 agtcgcgcct cgaggaactg aaggg
//
LOCUS       DATLMA010000431         3922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_768180, whole genome shotgun sequence.
ACCESSION   DATLMA010000431 DATLMA010000000
VERSION     DATLMA010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768180"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VNA10_05530"
     CDS             <1..434
                     /locus_tag="VNA10_05530"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HVG37173.1"
                     /translation="SVSYGGYAVAHILEKAPELWAVGVSIVGYFNWLTATTNERGYLR
                     RYDRQKMGDPAVDADLYRKFSPIYFLEEIRAPVLFTGGAHDPRCPVTEARAMVDEMRK
                     MGKVVDYLEFADEGHWPRKMSNQVRLNERALEWLTQYLPDR"
     gene            complement(437..1522)
                     /locus_tag="VNA10_05535"
     CDS             complement(437..1522)
                     /locus_tag="VNA10_05535"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HVG37174.1"
                     /translation="MEPGLLFIPGPVPLPPRVLEELAKPAMPHYGDAWVKAHGETREM
                     LRYLWSSSDGHVLPIAGPGHAGLEAIAYTFLRPGDRVVVVSNGFFGERTREVLQTHRV
                     KVDVVSSAWGAGPDIPALREALKTPTKAVAVVHNETSTGITNPLEPIVEAAHAVDAAV
                     IVDAVSSLGGLPLPFAKLGIEAAFSASQKCIAAPAGIAPVAVARSLWESTDPATVEGW
                     YLNLYTWDRYEREWGDWHPTPTTISSNLFYAFHRALLLVKEEGLEARIARHAKVAAHL
                     RDGLGEIGFSPLGSANLLSNTVTCFAPPASVDANRLVRRLRDEHHIYISGGLGPLRGK
                     TIRIGTMGTQADPEIIDWLLKAIRASL"
     gene            complement(1598..2545)
                     /gene="radA"
                     /locus_tag="VNA10_05540"
     CDS             complement(1598..2545)
                     /gene="radA"
                     /locus_tag="VNA10_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013720241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair and recombination protein RadA"
                     /protein_id="HVG37175.1"
                     /translation="MAVAVKAIEELPGVGPATAEKLKEAGFTDLMGLAVASPTMVADA
                     AEIGTNVAQKIIIAARAAVDIGGFETGDVILERRKSVAKLTTCSKALDELLGGGLETQ
                     AITEAYGEFGSGKSQLGHQLAVNVTRPEEDGGMNGDVVWIDTEQTFRPERIRQMADAL
                     DQDSEAILKRIHVARAFNSHHQMLLVEKAQELAQDFPIRLIVIDSLTAHFRAEYIGRG
                     VLAERQQLLNKHIHELMRFGDIHNAVIYVTNQVHAKPDAFFGDPTRPVGGHIVGHSAT
                     FRVYLRKSKGGKRIARLIDSPNLPEAEAVFSVSEDGIRD"
     gene            2750..3187
                     /locus_tag="VNA10_05545"
     CDS             2750..3187
                     /locus_tag="VNA10_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012617405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37176.1"
                     /translation="MASTPVEPPVPIVPFKNCPIATSLGVLGRKWSLLIIRDIGWKRA
                     DRFNALLRTIPGLTPRMLALRLSELEDAEMIHKVETHNSPKLVRWALTKKGEDIMPVL
                     MRLVAFGSRWFPERIFEDERPRTLAEIYPENGGNHPWITGTPD"
     gene            3255..>3922
                     /locus_tag="VNA10_05550"
     CDS             3255..>3922
                     /locus_tag="VNA10_05550"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 family protein"
                     /protein_id="HVG37177.1"
                     /translation="MGTEDRGWGGLYRAGGIALIVAGILVLVTLPIIPMIIPSLAPTS
                     VQAGLDSIHSQSVLYGTTWGLYLVSDLLYLIPFAALYLVLRPHHRVAALVALIFNSLF
                     VTIDVAVDIPLRLSLISLSNAYAAANPTGQGAYVATAQLAMDLANITALIATFVQFSA
                     VILVSYAMLRETPFRRGAAYVGIVGGIVALLFIPTFVLGSPLSGLFNLAGFVLLFIWS
                     VIAG"
BASE COUNT          667 a         1275 c         1239 g          741 t
ORIGIN      
        1 tcagcgtgag ctacggtggg tacgccgtgg cgcacatcct ggagaaggcg cccgagctgt
       61 gggcggtcgg cgtgagcatc gtcgggtact tcaactggct caccgcgacg acgaacgagc
      121 gcggctacct gcgccggtac gatcggcaga agatgggaga tcccgcggtg gacgccgacc
      181 tgtatcgcaa gttctcgccg atctacttcc tcgaggagat ccgggccccg gtcctcttca
      241 cgggcggagc gcacgacccg cggtgtcccg tcacggaggc gcgcgcgatg gtcgatgaga
      301 tgcggaagat gggcaaggtc gtcgactacc tcgaattcgc cgacgagggc cattggcccc
      361 gcaagatgtc gaaccaagtc cgcctgaacg aacgggcgct cgagtggctc acgcagtatc
      421 tgccggaccg ctgagctcag aggctcgcgc ggatcgcctt gaggagccag tcgatgatct
      481 ccggatcggc ctgggttccc atcgtcccga tccggatcgt cttgcctcgc aacggtccga
      541 ggccgccgga gatgtagatg tggtgctcgt cgcgcagccg ccggaccagc cggttcgcgt
      601 ccacgctggc aggaggggcg aagcacgtga ccgtgttcga caagaggttc gcggatccga
      661 ggggcgagaa accgatttcg cccagcccgt cgcgcaaatg agcggcgacc ttcgcgtgtc
      721 gggcgatgcg ggcttcgagg ccttcttcct tcacgaggag gagcgcgcga tggaatgcgt
      781 agaacaggtt cgaggaaatc gtcgtcggcg tgggatgcca atctccccat tcccgctcgt
      841 accggtccca ggtgtacagg ttgaggtacc agccctcgac ggtcgccgga tctgtggact
      901 cccatagcga gcgggcgacc gcgaccggcg cgatgccggc gggcgccgcg atgcattttt
      961 gggacgcgct gaacgccgcc tcgatcccga gtttggcgaa cgggagcggg aggccgccga
     1021 gggaggagac cgcgtcgacg atgaccgccg cgtccacggc atgcgcggcc tcgacgatcg
     1081 gttcgagcgg attcgtgatg cccgtggatg tctcgttgtg aaccaccgcg acggccttcg
     1141 tcggcgtctt gagcgcctct cgcaacgctg ggatgtcagg gcctgcaccc cacgccgacg
     1201 agacgacgtc caccttcacg cgatgggttt ggaggacctc ccgcgtccgc tccccgaaga
     1261 atccgttgga cacgacgacg acccggtcgc ccgggcgcaa gaacgtgtac gcgatcgcct
     1321 cgaggccggc gtgacccggg cccgcgatcg gcagcacgtg gccatcgctg gacgaccaga
     1381 gatatcgcag catctcccgc gtctcgccgt gggccttgac ccacgcatcg ccgtagtgag
     1441 gcatcgcggg cttcgcgagt tcttcgagca cgcgaggggg gagcgggacg ggccccggga
     1501 tgaacagaag ccccggttcc atggagtcgg tcaacgatgg gtgggacgct acttcaaact
     1561 gtcccgacac gctttgtcac ggaacgaaag agcacggtca gtcgcggatt ccgtcctcgg
     1621 agacgctgaa gaccgcctcg gcctcgggca ggttcgggga atcgatcagc cgggcaatcc
     1681 gtttcccgcc tttcgacttg cgcaggtaga cccggaacgt ggcgctgtgg ccgacaatgt
     1741 gcccgcccac ggggcgggtc ggatccccga aaaacgcatc gggcttcgca tggacctgat
     1801 tcgtcacgta gatcacggcg ttgtggatgt ctccaaaccg catcagctcg tggatgtgtt
     1861 tgttcaggag ctgctgcctc tcggcgagca cgcctcggcc gatgtactcc gctcggaagt
     1921 gggccgtcag cgaatcgatc acgatgagcc ggatcgggaa gtcttgcgcg agctcctgcg
     1981 ctttctcgac gagcagcatc tggtgatggc tgttgaacgc gcgggccaca tggatccgct
     2041 tgagaattgc ctcggagtcc tgatctaacg catccgccat ctgtcggatc cgctcgggtc
     2101 ggaaggtctg ctcggtgtcg atccacacga cgtctccgtt catgcccccg tcttcctcgg
     2161 gccgcgtcac gttgaccgcg agctgatggc cgagctggct ctttcccgag ccaaattcac
     2221 catacgcctc ggtgatcgcc tgcgtctcga gaccgccgcc caacagttca tccagggcct
     2281 tcgaacaggt cgtgagcttc gcgacggact tgcgacgctc gaggatcaca tccccggtct
     2341 cgaagccgcc gatatcgacg gccgcgcgcg ccgcgatgat gatcttttgg gccacgttcg
     2401 tgccgatctc ggcggcatcc gcgaccatcg tcggcgaggc caccgccagc cccatgagat
     2461 ccgtgaatcc ggcctctttc agcttctcgg cggtcgcggg accgaccccc ggaagctcct
     2521 cgatggcttt cactgcgaca gccacctttt cacctctctt cccctcatcc ttggccatac
     2581 ttaaggcggt aacacgggga gatgggtgaa actatcgttt tcctgcgaga caacggagaa
     2641 ttgtggaccg ttggcgcggt gccggcgtgg accacctccg tcgcagaccg cccgaccgtc
     2701 ttcttttaaa cgcgcggagt cccatcctct cgacgatcca gggatcgcca tggcgagcac
     2761 tccggtcgag ccacccgtgc ccatcgttcc gttcaagaac tgcccgatcg cgacgagcct
     2821 cggggtcctc ggtcggaagt ggagcctgct catcatccga gacatcgggt ggaaacgggc
     2881 cgaccggttc aacgccctcc tccgcacgat cccgggcctc acgccccgga tgctcgccct
     2941 tcggttgagt gagctcgagg acgccgaaat gatccacaag gtggagacac ataattcccc
     3001 caaactggtc cgatgggcgc tcacgaagaa gggagaggac atcatgcccg tgctgatgcg
     3061 cctggtcgcg ttcggatccc gatggttccc ggaacgaatc ttcgaggacg agcggcctcg
     3121 cacgctcgcc gagatctatc cggagaacgg cggaaaccat ccgtggatca cgggtacgcc
     3181 cgactagccg gatcgctcac tatactttct ttcacgtggg ctctcattta gcatgctaaa
     3241 cataccgtcg cctcatgggg accgaggatc gaggatgggg cggactctac cgcgcgggcg
     3301 gcatcgcgct gatcgtcgcg ggcatcctgg tgctggtcac gctgccgatc atcccgatga
     3361 tcatcccgag cctcgccccc actagcgtcc aggccggttt ggacagcatt cactcccaga
     3421 gtgtcctata cggaacgacg tggggcctct acctcgtcag cgacctactc tacctgattc
     3481 cattcgcggc gctctatctg gtcctgaggc cgcaccatcg ggtggcggcg ctggtcgccc
     3541 tcatcttcaa ttcgttgttc gtgacaatcg atgtcgcggt cgacattccg ctccgattat
     3601 cgctgatcag tttgagcaat gcatacgcgg ccgcaaaccc gacggggcaa ggtgcatacg
     3661 tcgcgacggc ccagttggct atggacctgg cgaacatcac ggcgctcatc gcgacgttcg
     3721 tccagttctc cgcagtgatc cttgtgagct acgcgatgct gcgcgagacg ccgttccgac
     3781 gaggcgcggc ctacgtcggc atcgtcggtg ggatcgtggc gctgctcttc attccgacgt
     3841 tcgtcctcgg ttctccgctc tccggactat tcaacctcgc cggcttcgtc ttgctgttca
     3901 tctggagcgt catcgccggt tg
//
LOCUS       DATLMA010000432         1340 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_99664, whole genome shotgun sequence.
ACCESSION   DATLMA010000432 DATLMA010000000
VERSION     DATLMA010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99664"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VNA10_05555"
     CDS             complement(<1..274)
                     /locus_tag="VNA10_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37178.1"
                     /translation="MLLCPTERHMLARTDIHLTGRESRSLATHLSFFFRPGTRSARDT
                     SDDHRPIDPEGPARWETEPVSPKKRLLATWTGRIFVALVAAAVIIGG"
     gene            473..>1340
                     /locus_tag="VNA10_05560"
     CDS             473..>1340
                     /locus_tag="VNA10_05560"
                     /inference="COORDINATES: protein motif:HMM:NF014458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl--tRNA ligase-related protein"
                     /protein_id="HVG37179.1"
                     /translation="MLDIRLVRENPELIRKDLAKRNAPEKAKLLADVIRWDQEWRKAL
                     AEADHLKRRRNEITRDIGEAKKAGKSTEKLRKEAAGLPKKIDALDKTIDELAAKVREG
                     LLRLPNILHESVPVGKDDTENVEVARWGSPRKLDFELKSHGELLEALRLADFERARKV
                     AGAGFVYLLGDLVRLDQALLTFALDYMLKQGFTPVFPPFMMRRAAYEGVVDLGDFETV
                     MYKIDGEDLFLIATSEHPMGAMHMDEIIDEADLPIALTGLATQFRREIGGHGVDTKGF
                     FRMHQFNKVEQFV"
BASE COUNT          272 a          422 c          425 g          221 t
ORIGIN      
        1 cgcccccgat gatgactgca gccgcaacga gggcaacgaa gatcctaccc gtccatgttg
       61 cgagcagcct cttcttcgga ctcaccggtt ccgtttccca cctcgcggga ccctcggggt
      121 cgataggcct atgatcgtcg ctcgtatctc tcgcgctcct agttcccgga cgaaaaaaga
      181 aggaaagatg cgtcgctagg gatcttgact ccctccccgt gaggtgaata tccgtccgag
      241 ctagcatatg tctttcggtc ggacagagga gcattccgta ctgctccgga taccaagcaa
      301 caggaggata aaagtgtccg tgagagcgct gcacggaccg gcgaagccct tcgtcctgtg
      361 tgcggatctg tgtcccatcg ctagccccgc agaggcccac tccgggagga acggccagcc
      421 gtagccgcgc ctccaaacaa cgtacaaata gcctcggccg catggggccg acgtgctgga
      481 catccggctc gtgcgggaga accccgagct catccgcaag gacctcgcaa agcgcaatgc
      541 accggagaaa gcgaagctcc tcgccgacgt gattcggtgg gaccaggaat ggcgcaaggc
      601 gctcgccgag gcggatcacc tgaagcggcg ccgcaacgag atcacgcggg acatcggtga
      661 ggcgaagaag gcaggcaagt cgacggagaa gctgcgcaag gaggccgccg gccttccgaa
      721 gaagatcgac gcgctcgaca agacgatcga cgaactggcc gcgaaggtcc gcgagggtct
      781 cctccgtttg ccgaatatcc tccacgagag cgtccccgtt ggcaaggacg acacggagaa
      841 cgtcgaggtc gctcgatggg ggagtccgcg gaagctcgac ttcgagttga agtcccacgg
      901 agagctgctc gaggccttgc gtctcgccga tttcgaacgc gcgcggaagg tcgcgggggc
      961 gggcttcgtc tacctcctcg gagacctcgt gcgactcgac caggcgctgc tcacgttcgc
     1021 cctcgattac atgctgaagc agggcttcac gccggtcttc cccccgttca tgatgcgccg
     1081 cgcggcgtac gagggcgtcg tcgacctcgg ggacttcgag acggtcatgt acaagatcga
     1141 cggcgaggac ctcttcctca tcgcgacgtc ggaacatccg atgggcgcga tgcacatgga
     1201 cgagatcatc gacgaggcgg acctgccgat cgcgctcacg ggactcgcaa cgcagttccg
     1261 gcgggagatc ggcggccacg gcgtcgacac gaagggcttc ttccggatgc accagttcaa
     1321 caaggtcgag cagttcgtct
//
LOCUS       DATLMA010000433         1782 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_644346, whole genome shotgun sequence.
ACCESSION   DATLMA010000433 DATLMA010000000
VERSION     DATLMA010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644346"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VNA10_05565"
     CDS             complement(<1..299)
                     /locus_tag="VNA10_05565"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the formation of L-threonine from
                     O-phospho-L-homoserine; Derived by automated computational
                     analysis using gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HVG37180.1"
                     /translation="MRPAFLECTTCSKHHALRLLNTCDCGGPLFARYDWKDIRREDLL
                     PRRDLWRYAPLLPLEPGEIRSRGEGGTPLHQLERIGSGGRVARLKVASLHLKDEGL"
     gene            378..1205
                     /gene="larE"
                     /locus_tag="VNA10_05570"
     CDS             378..1205
                     /gene="larE"
                     /locus_tag="VNA10_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010995458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HVG37181.1"
                     /translation="METASRSFDLRDAHDRMAAAMRSRGRVLVAFSGGVDSGLVARVA
                     HDALGDDALAVLADAESLARWELSEAISEAAEIGIRLETVRVSELANDRYVANPANRC
                     YFCRQELGAALKPLAAKQGFAAIADGVNVSDLGDHRPGIQAMNEAGFWHPLVEFGFRK
                     ADVRALAHELHLSFFDKPSNACLSSRIAYGEVITMEKLQRVEAAEMAVRALGFRVVRV
                     RAHDGIARIEVPREDLPRMAETAMAEKVVEAVRNAGFAYVTVDLRGYRSGSMNEDLR"
     gene            complement(1236..>1782)
                     /locus_tag="VNA10_05575"
     CDS             complement(1236..>1782)
                     /locus_tag="VNA10_05575"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HVG37182.1"
                     /translation="GLGLLGPVAITHMRRRKMASQAQALPSDATSTPIFSAKLFTAQM
                     IALGIGLHNLGEGLAIGAAYAAGVFGLTNLLVIGFALHNSTEGLGISGPIASTNTGVR
                     DPLILGFLAGSPTILGSMIGSLAYSAALGTLFFSAAAGALLYVIVELVKVTSTPEPSK
                     VVFVGIVTGIVLMFVTGLLVR"
BASE COUNT          311 a          541 c          624 g          306 t
ORIGIN      
        1 agtccttcgt ccttgaggtg caacgacgcg accttgagac gcgcgactcg gccacccgag
       61 ccgattcgct cgagttggtg gaggggcgtt cctccttcgc cgcgcgaccg gatctcgccg
      121 ggctccaacg ggagcagtgg cgcgtaccgc cagagatccc tccggggcag caggtcctcg
      181 cggcggatgt ccttccagtc gtagcgggca aacaacggac cgccgcagtc gcaggtgttg
      241 aggagccgga gcgcgtggtg cttcgagcac gtggtgcatt cgaggaaggc ggggcgcacg
      301 cgccgccatc tcgccggggg ccattacgtt ttgtcacgcg cgatggcttt atccccgatg
      361 ccgcgttcga tgaggcgatg gagaccgcga gtcgctcgtt cgacctgcgg gatgcgcacg
      421 atcgcatggc cgcggcgatg cggtcccggg gccgcgtcct cgtcgcattc tccggaggag
      481 tcgacagcgg cctggttgcc cgcgtcgcgc acgacgcgct cggggacgat gccctggcgg
      541 tcctcgcgga cgcggaatct ctggcccgtt gggagctctc cgaggcgatc tcggaagccg
      601 cggagatcgg aattcgcctc gagaccgtcc gcgtttccga gctggccaac gatcggtacg
      661 tcgcgaatcc ggcgaatcga tgctactttt gccgccaaga gctcggggcg gcgttaaagc
      721 ccctggcggc gaagcagggg ttcgcggcga tcgcggatgg cgtcaacgtc tctgacctgg
      781 gcgaccatcg gccagggatc caagcgatga acgaggcggg cttctggcat cccctggtcg
      841 aattcggttt ccggaaagcg gatgtgcgag cactcgctca cgagttgcac ctcagcttct
      901 tcgataagcc gagcaacgcg tgcctgtcct ctcgaattgc atatggcgag gtgattacca
      961 tggagaaact acaacgcgtc gaggcggcgg agatggcggt ccgtgcgttg ggcttccgcg
     1021 tcgtgcgcgt gcgggcccac gatggaatcg cgcggatcga ggtgcctcgg gaggatcttc
     1081 cgcggatggc cgagaccgcg atggccgaga aagtggtgga ggcggtccgg aatgccgggt
     1141 tcgcgtatgt gacggtcgat cttcgggggt accgcagcgg ctcgatgaac gaggatctcc
     1201 ggtgaatcac acgtcggtcg ggaccctcgg ctgtctcacc gaaccagaag gccggtcacg
     1261 aacatcagga cgatgccggt cacgattccg acgaagacga ctttgctggg ctccggcgtg
     1321 gaagtgacct tgacaagctc gacgatcacg tagagcaacg cccccgccgc ggccgagaaa
     1381 aacagggtcc cgagcgccgc ggagtaggcg agcgagccga tcatgctgcc gaggatcgtc
     1441 ggcgagcccg cgaggaatcc gaggatgagc gggtcccgaa caccggtgtt ggtggatgcg
     1501 atcggacccg agattcccag cccctcagtg gaattgtgga gagcgaaacc aatgacgagg
     1561 aggttcgtaa ggccgaagac ccccgccgca taggccgctc cgattgcaag tccttccccg
     1621 aggttgtgaa gcccgatgcc taaggcgatc atttgggcgg tgaagagttt cgcgctgaag
     1681 atcggcgtcg acgtcgcgtc cgatggcaac gcctgggctt gggaagccat cttccttcgc
     1741 cgcatgtgcg taatcgccac gggtccgagg aggcccagcc cc
//
LOCUS       DATLMA010000434         1271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_644438, whole genome shotgun sequence.
ACCESSION   DATLMA010000434 DATLMA010000000
VERSION     DATLMA010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644438"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1056)
                     /locus_tag="VNA10_05580"
     CDS             complement(<1..1056)
                     /locus_tag="VNA10_05580"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37183.1"
                     /translation="MNRLTDLFRRGFAENVRFGVSAIREHKLRSGLTILGIVVGVATV
                     IAMVAIVTGFNNNVIGNFQAFGASRIEFKKYKDRFGPPGPGSEEERRRRNLTMDDVLA
                     IRKACPEAAAVSALVGYFDAEIHVKNGSLEANNPYVLGVDEYYPIATAYTIGLGRFFT
                     PAEIEHGSLGVVLGSEVREAIFPAEHPLGKEITVNGLRYRVIGVLEKKGEQFGYSPDN
                     KVVLPYKTFEHQFGYQVRQGGVNINAVPRRPEDVDVVIEKATAVLRLRRRIPFNKPND
                     FEIGTPAQLIGQFRAITGGVSGAMILIALISLAVGGVGVMNIMLVSVTQRTREIGIRK
                     AVGAFRRDIVRQFLTEAV"
     gene            complement(1064..>1271)
                     /locus_tag="VNA10_05585"
     CDS             complement(1064..>1271)
                     /locus_tag="VNA10_05585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37184.1"
                     /translation="LLASAGGVVGVLLGALIAFLVSQVFPAQVRLPFAVLGVGVAIVT
                     GVLAGLAPSAAASRVTPIEALRFE"
BASE COUNT          239 a          428 c          397 g          207 t
ORIGIN      
        1 cacggcctcg gtcagaaatt gccggacgat gtcgcggcgg aaggcaccga cggccttgcg
       61 gattccgatc tcccgcgtcc tctgcgtgac cgagacgagc atgatgttca ttaccccgac
      121 gccgccgacc gcaagcgaga tcagagcgat caagatcatc gctccggaca cgccgcccgt
      181 aatcgcgcgg aactgcccga tcagctgagc cggcgtgccg atctcgaagt cgttgggctt
      241 gttgaaggga atccggcgac gcaggcgcag gaccgccgtc gccttttcga tcaccacatc
      301 cacgtcctcc ggccggcgag gcaccgcgtt gatgttcacg ccgccctggc gcacctgata
      361 gccgaactgg tgttcgaagg tcttgtaggg aagcacgacc ttgttgtccg gcgagtagcc
      421 gaattgctct cccttcttct cgagcacgcc gatcacgcga tagcgcaggc cgttgaccgt
      481 gatttcctta ccgagcggat gctccgccgg aaagatcgcc tcccgcactt cggagcccag
      541 gaccacgccg agcgaaccgt gctcgatctc ggccggcgtg aagaatcgtc cgaggccgat
      601 cgtgtaggcc gtggcgatcg ggtagtactc atccaccccg agcacgtagg ggttattggc
      661 ctccaggctc ccgtttttca cgtggatttc ggcgtcgaag tagccgacga gggcggagac
      721 cgccgcggcc tccgggcagg ccttgcggat cgccaggacg tcgtccatcg tcaggttgcg
      781 gcgccgccgc tcctcctcgg acccggggcc gggcgggccg aagcggtcct tgtacttctt
      841 gaactcgatc cggctcgccc cgaacgcctg gaagttgccg atcacgttgt tgttgaagcc
      901 cgtcacgatc gcgaccatcg caatgaccgt cgcgaccccc acgacgatcc caaggatcgt
      961 caagcccgag cgcagcttgt gctctcgtat cgcgctgacg ccaaagcgca cgttctcggc
     1021 aaagcctcgg cggaacaggt cggttagccg gttcacacaa tcctcattcg aaacgcaagg
     1081 cctcgatcgg cgtcacacgg gaggcggccg cggaaggagc cagacccgcg aggactccgg
     1141 tgacaatggc cacgccgacg cccaggaccg caaaaggcag acgaacctgc gcgggaaaga
     1201 cttgactgac gagaaaggcg atgagcgcgc cgaggagcac gcccaccacg ccgcccgccg
     1261 aggcgagaag c
//
LOCUS       DATLMA010000435         1242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_221198, whole genome shotgun sequence.
ACCESSION   DATLMA010000435 DATLMA010000000
VERSION     DATLMA010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221198"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /gene="rplX"
                     /locus_tag="VNA10_05590"
     CDS             complement(<1..289)
                     /gene="rplX"
                     /locus_tag="VNA10_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011345180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HVG37185.1"
                     /translation="MKNPRLKKSDMVVVIAGKDRGRQGKILKIMPGKSRVIIERVNLI
                     KRHVRPNPSKNIAGGISEKEAPIHISNVMLVDPDRNTRTRIGRRRDAEGTPE"
     gene            complement(289..666)
                     /gene="rplN"
                     /locus_tag="VNA10_05595"
     CDS             complement(289..666)
                     /gene="rplN"
                     /locus_tag="VNA10_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013709164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HVG37186.1"
                     /translation="MIQMGTILEVADNSGARKIACIRMRGGSAGRYAGLGDVITASVK
                     EAAPDSPFVEKHGKRVVRAVIVRTRRNHRRRDGSYIRFDDNAAVLISNEGEPVGTRVF
                     GPVARELREKKFMKIISLAPEVL"
     gene            complement(687..965)
                     /gene="rpsQ"
                     /locus_tag="VNA10_05600"
     CDS             complement(687..965)
                     /gene="rpsQ"
                     /locus_tag="VNA10_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018084557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HVG37187.1"
                     /translation="MEQTSKNPAPRPRATKIGRVVSDGMNKSIVVEVGRRVQHDRYKR
                     TIRRTSRFMAHDEANAAKVGDRVRIEETRPMSKRKRWILREVLVRAEA"
     gene            complement(965..1177)
                     /gene="rpmC"
                     /locus_tag="VNA10_05605"
     CDS             complement(965..1177)
                     /gene="rpmC"
                     /locus_tag="VNA10_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010496712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HVG37188.1"
                     /translation="MKKKERETLAQQGESELLEKEKQIREASWKLRLQKATGQLDNPM
                     RLKTLRRDLARIKTYRRALDRKAENP"
BASE COUNT          167 a          418 c          382 g          275 t
ORIGIN      
        1 gctccggcgt tccctcggcg tcccggcggc gcccgatgcg cgtgcgggtg ttgcggtccg
       61 gatccacgag catcacgttg gagatgtgga tcggagcttc cttctcagag atccccccgg
      121 cgatgttctt cgacgggttc ggtcgcacgt gacgcttgat caggttgacg cgctcaatga
      181 tcacgcgcga cttgcccggc atgatcttca ggatcttccc ctgccgcccg cggtccttac
      241 cggcgatgac cacgaccatg tcgctcttct tcaatcgggg attcttcatc acagcacttc
      301 cggagccagc gagatgatct tcatgaactt cttttcacgc aactcgcgcg ccaccggtcc
      361 gaagacgcgc gtgccgacgg gctctccttc gttggagatc aggaccgcgg cgttgtcgtc
      421 gaagcggata taggagccgt cgcggcggcg gtggttgcgc cgcgtccgca cgatgacggc
      481 gcggacgacc ctttttccgt gcttctcgac gaacggggag tcgggcgcgg cttctttcac
      541 cgacgccgtg atgacgtcgc ccagaccggc gtaacgcccg gccgaaccgc cgcgcatccg
      601 gatgcaggcg atcttgcggg cgcccgagtt gtccgcgacc tcgaggatgg tgcccatctg
      661 gatcatgccg ccacctgtgc ctgcatctac gcctcagccc ggacgaggac ttccctcaga
      721 atccaccgct tccgtttcga catcggccgc gtctcttcga tgcggacgcg gtcgccgact
      781 ttggcggcat tggcctcgtc gtgagccatg aagcggctcg tccgacggat cgtccgcttg
      841 tatcggtcgt gctggacgcg gcgtcccacc tcgaccacga tggatttgtt catgccgtcc
      901 gagaccactc ggccgatctt ggtcgctctc gggcgcggcg ccgggttttt cgaggtctgt
      961 tccattacgg gttctccgcc ttccggtcga gcgcgcggcg gtaagtcttg atccgcgcga
     1021 ggtcacgccg cagcgtcttc agacgcatcg ggttgtcgag ctgtccggtc gccttctgga
     1081 gccggagctt ccaggacgct tcccggatct gcttttcctt ttccaggagc tcgctctctc
     1141 cctgctgggc gagcgtctct ctctccttct tcttcatcga atctccatct ccgactcgcg
     1201 ggtgacgaaa cgggtcgcga ggccgatctt gtcggcggcg ag
//
LOCUS       DATLMA010000436         2968 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_460783, whole genome shotgun sequence.
ACCESSION   DATLMA010000436 DATLMA010000000
VERSION     DATLMA010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460783"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VNA10_05610"
     CDS             <1..629
                     /locus_tag="VNA10_05610"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG37189.1"
                     /translation="IVAISENVRGRVRQSYGRDASVIYPPVATSRFRFREIGDFWLSV
                     SRMYPEKRIELQLEIFRRLPHERLVLVGGYSAGDLAERYLASLKPPPNVTLLGEIPED
                     RLVDLYARCRGFLTTAVDEDFGITPVEAMSAGKCVLATDEGGYRETVIPAKTGFLLPP
                     DPDAFVRTLLDLDESALQSMKDDCIARARTFDETVFVEKMKSLATGAA"
     gene            698..1678
                     /locus_tag="VNA10_05615"
     CDS             698..1678
                     /locus_tag="VNA10_05615"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003350021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HVG37190.1"
                     /translation="MAKSALVTGATGQDGSFLMELLLKKGYDVHGLVRRLSIPNIGNI
                     QHLVDRVSLLDGDLIDQSSLNAAVKESEPDEVYNLAAQSFVGTSFVQPVLTGEITGLG
                     AVRVLEAVRAYAPDARVYQASSSEMFGKVDREPQDESTPFHPRSPYGVAKVYAYWACV
                     NYREAHGLFVSNGILFNHESERRGLEFLTRKVSTGVAKIHHGLAKTVTLGNLDAKRDW
                     GYAPEFVDMMWRVLQHKEPDDFVGATGEAHSVREFVEEAFRVAGISDWEAHVTIDEKN
                     FRPSEIYNLRGDAGKAKRILGWQAKTKFKQLAKLMVEADIESLKGSRKPK"
     gene            complement(1683..2069)
                     /locus_tag="VNA10_05620"
     CDS             complement(1683..2069)
                     /locus_tag="VNA10_05620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37191.1"
                     /translation="MLQPQELVVARLLPTIRARLARELLHTYKMKQVDVAHSMGITQA
                     AVSHYNTQSRGVDQEMLRLFPEIKPYVHELSSQIAHGMTLSDQIASVNEFCSGLMLTA
                     RFCEYHKSLGDIDPHCTACFPSPPRP"
     gene            complement(2217..>2968)
                     /locus_tag="VNA10_05625"
     CDS             complement(2217..>2968)
                     /locus_tag="VNA10_05625"
                     /inference="COORDINATES: protein motif:HMM:NF022932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37192.1"
                     /translation="QESFGPSAERIRGTLRDLGFSGYAAQTFCELVRMSHATAGDLVL
                     KTGIPDSKIYYALDELAEKGLVEVQDGKPRTYRVVPAKEVEIRLARLVESEYEKRRAA
                     TTRLGSLLEPLRAATKSSDTDVAYIVKGLPNVVARAKALISSARKEIVVLAADEGIFR
                     KLEEDLARATRRRIRVRLAVPEISVTKDLEKAAEIRAIVCDCVLVVVDGQQVLTMSRT
                     ADGDAYAITSTDPTLVRLGLDYWESPRCCVM"
BASE COUNT          555 a          912 c          956 g          545 t
ORIGIN      
        1 agatcgtcgc cattagcgag aacgtgcgag gacgggtccg gcaatcctac gggcgcgatg
       61 cgagcgtcat ctatccgccc gtcgcaacga gccgatttcg gttccgggag atcggggact
      121 tctggctctc cgtcagccgg atgtatccgg agaagcggat cgaactccaa ctggagatct
      181 tccggcggct gccgcacgag cggctcgtct tggtcggcgg ctactccgca ggcgacttgg
      241 ccgaacggta cttggccagc ctcaagccgc ctccgaacgt gacccttctc ggcgaaatcc
      301 cggaggaccg cctggtcgac ttgtacgcgc ggtgccgcgg attcctgacg acggcggtcg
      361 atgaggattt cgggatcaca ccagtcgagg cgatgtcggc cgggaagtgc gtcctcgcca
      421 cggatgaggg cggataccga gagaccgtga ttcccgccaa gaccgggttc ttgctcccgc
      481 ccgatccgga tgcgtttgtt cggaccctac tcgacctcga cgaatctgcg ttgcagtcga
      541 tgaaggacga ttgcatcgca cgggcgcgca ccttcgatga gaccgtcttt gtcgagaaga
      601 tgaaaagcct tgcgacgggc gccgcgtagc gcccgcggcg atccctccac gcagtcatgc
      661 cgatacgata aagagcgggt gaggggttcc gcgcgcaatg gcgaagtccg ctctcgtgac
      721 gggagccacg ggtcaggacg gctcgttcct catggagctg ctcctgaaga agggctacga
      781 cgtgcacgga ctcgttcgcc gtctgagcat tccgaacatc ggcaacatcc agcacctcgt
      841 ggaccgcgtg tccctgctag acggcgacct cattgaccaa tcctcactga acgcggcggt
      901 gaaagagtcg gagcccgacg aggtgtacaa tctcgccgcc cagtcgttcg tgggaacgtc
      961 attcgtccaa cccgtgctca cgggagagat cacgggcctc ggggccgtcc gggtcctcga
     1021 agcggtccgc gcgtacgccc cggatgcgag ggtgtaccag gcctcgtcca gcgaaatgtt
     1081 cgggaaggtg gaccgggagc cgcaggacga gagcacgccg ttccatcccc ggagcccgta
     1141 cggcgtcgcg aaggtctatg cgtattgggc gtgcgtgaac taccgcgaag cccacgggtt
     1201 gttcgtgtcc aacggcatcc tgttcaacca cgaatccgag cgacgcggcc tcgaattctt
     1261 gacgcgcaag gtgagcaccg gagtggcgaa gattcatcac ggcctcgcga agacggtcac
     1321 cctcggaaac ctcgatgcga agcgggattg ggggtacgct ccggaatttg tcgacatgat
     1381 gtggcgggtc ctgcaacaca aggaaccgga cgacttcgtc ggagcgacgg gcgaggccca
     1441 ttcggtgcgc gagttcgtgg aggaagcatt ccgcgtcgcc ggcatctcgg attgggaggc
     1501 gcacgtgacg atcgacgaga agaacttccg accctcggag atctacaacc tgcgcgggga
     1561 cgcggggaag gccaagcgga tcctcggatg gcaggcgaag accaagttca agcagctcgc
     1621 gaaactcatg gtcgaagcgg acatcgagag cctgaaagga tcccgcaagc caaagtgatc
     1681 cgctacggtc gaggcggcga cgggaagcag gccgtgcagt ggggatcgat gtcccccagg
     1741 ctcttgtggt actcacagaa ccgggccgtg agcatgaggc cggagcagaa ctcgttcacg
     1801 ctcgcgatct ggtccgagag ggtcattcca tgggcgatct gggaggagag ttcatgcacg
     1861 tatggcttga tctccgggaa gagtcggagc atttcctggt ccacgccgcg gctttgcgtg
     1921 ttgtagtggc tcacggccgc ttgcgtgatc cccatcgaat gggcgacgtc gacctgcttc
     1981 atcttgtacg tatgtagtag ttcacgggcc aaccgcgcgc gaatcgtggg aaggagtcga
     2041 gcgaccacga gttcttgagg ttggagcatc gggcgcctcg tccctcccgg gaccggactg
     2101 aatacagcat agcacggtat ttaaccgtgt cccttttcct cgttgtcgcg ataacttcac
     2161 gtttgcgtcg attcgcattt tctatggagg gaacggtttc gtagcggcga cccgaatcac
     2221 atcacacagc agcgcggact ctcccaatag tccagcccga gccggaccag cgtcgggtcg
     2281 gtcgaggtga tcgcatacgc gtcaccgtcc gcggtccgag acatcgttag gacctgttgg
     2341 ccatcgacga ccacgaggac gcagtcgcac acgatcgcgc ggatctccgc agctttctcg
     2401 aggtctttcg tgaccgagat ctcgggcacc gcgagccgca cgcgaatccg ccgccgggtc
     2461 gcgcgagcga gatcttcctc gagcttgcgg aaaatccctt cgtccgcggc gaggacgacg
     2521 atctccttcc gcgccgacga gatcagggcc tttgctcggg ccacgacgtt ggggagtcct
     2581 ttcacgatgt acgccacgtc ggtgtcggaa gatttcgtcg ccgcacggag gggctcgagg
     2641 agggagccga ggcgcgtcgt cgcggcccgt cgcttctcgt actcggattc aacgagacga
     2701 gccagccgga tctccacttc cttcgccggc acgacccgat acgttcttgg cttcccgtcc
     2761 tggacctcga cgagaccttt ttccgccaac tcgtcgaggg cgtagtagat cttcgaatcc
     2821 gggatcccgg tcttcaggac cagatcgccc gccgtcgcgt ggctcatccg aaccagctca
     2881 cagaacgtct gggccgcgta tccgctgaat ccgaggtccc gcagggtgcc gcgaatcctt
     2941 tctgcggagg gcccgaacga ctcctgca
//
LOCUS       DATLMA010000437         1572 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_828820, whole genome shotgun sequence.
ACCESSION   DATLMA010000437 DATLMA010000000
VERSION     DATLMA010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828820"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VNA10_05630"
     CDS             complement(<1..363)
                     /locus_tag="VNA10_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37193.1"
                     /translation="MVDWDLTKERLRAYRRNLLNTWALFKESRIGVVGIGIMIVFVIL
                     AALAPYLGLRDPIYWRAPSEDVIALDTYWQADTSTFLFGAGSPIHSQVAMRVIPRATD
                     PRADRLYVASGNKLLALNP"
     gene            complement(363..>1572)
                     /locus_tag="VNA10_05635"
     CDS             complement(363..>1572)
                     /locus_tag="VNA10_05635"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37194.1"
                     /translation="TDVSTFQAWALVTSPSKAQANVTLTYSNGAFAGNYTTTESGVYP
                     VEFDVRNPATGDLGTAPFGFAANPVDITPFSYVTTEDPRGAIFTAPTAYTRSVADVYV
                     IVQSSQGDLGDLLGHVVTPRNATNEFALTHPLVAVDRPVWEEFWYYLAGMLTGNFGNS
                     FQTGRPVSSEIRERVGPTLLLFGTATIVSVLIGIGGGVLLAWFRGSRGEIAAIVSSLF
                     FYSMPIFWFGIILLFVFAYTFRLFPFGGIGGVDAFGNSLTGLSYAGDVLWHMALPLAN
                     LVILNFAGYVLLMRNSLLEVLGEDFVTVARAKGLKERTVMYKHAARNAMLPVTTVTAI
                     AMATVISGGVLTETIFSWPGMGFYFVARTLSQDFPAVQGAFFILALLTVLGNVVADVA
                     YAYLDPRVRL"
BASE COUNT          328 a          493 c          508 g          243 t
ORIGIN      
        1 cggattgagg gcgaggagct tgttgcccga tgccacatag aggcggtccg cccggggatc
       61 cgttgcgcgc gggatcaccc gcatcgcgac ctgggagtgg atcggactcc cggcgccgaa
      121 aaggaacgtc gacgtgtccg cttgccaata ggtgtcgagc gcgatgacgt cctccgatgg
      181 cgcgcgccaa tagatcggat cgcggaggcc gaggtacggg gcgagcgccg ccaggatgac
      241 gaagacgatc atgatcccga tcccgacgac cccgatgcga ctctccttga acagcgccca
      301 cgtgttcagg aggttccgac gataggcgcg gaggcgctcc ttcgtcaggt cccaatcgac
      361 cattacaatc gaaccctcgg gtccaggtac gcgtacgcga cgtcggcgac gacgttcccg
      421 aggaccgtca gcaaggcgag gatgaagaag gctccctgga ccgcggggaa atcctgagac
      481 aacgtccgcg cgacgaagta gaatcccatg ccgggccagg agaagatcgt ctccgtcagc
      541 acgccgccgc tgatcacggt ggccatcgcg atcgcggtga ccgtcgtcac cgggagcatc
      601 gcgttgcgcg ccgcgtgctt gtacatcacg gtgcgttcct tgagcccctt cgcccgcgcg
      661 accgtgacga agtcctctcc gagcacttcg aggagcgagt tccgcatgag caggacgtag
      721 ccggcgaaat tcaggatgac gaggttcgcg aggggcagcg ccatgtgcca caggacatcg
      781 ccggcgtagg agagtcccgt gagcgaattc ccgaaggcgt cgacgccgcc gatgccgcca
      841 aaaggaaaca gtcggaaggt gtacgcgaag acgaacaaca ggatgattcc gaaccagaag
      901 atcggcatcg agtagaagaa cagactcgac acgatcgccg cgatctcgcc tcgggatcca
      961 cggaaccacg cgaggaggac gcccccgccg atcccgatga ggacggacac gatcgtcgcg
     1021 gtgccgaaca ggaggagagt cggtccgact cgctcccgga tttcggagct caccggccga
     1081 ccggtctgga acgagtttcc aaaattaccg gtcagcattc cggccaggta gtaccagaac
     1141 tcctcccaca cgggtcggtc gaccgcgacg agcggatgcg tgagcgcgaa ctcgttggtg
     1201 gcgttgcgag gcgtcacaac atgtcctaag agatcaccga ggtcgccttg cgacgattga
     1261 acgatcacat agacgtccgc gacggaccgc gtgtacgccg tcggcgccgt gaagatcgca
     1321 ccgcgcgggt cttccgtggt cacgtacgaa aacggagtga tgtcgaccgg attcgcggca
     1381 aatccgaacg gcgcggtccc gagatccccg gtggccgggt tccggacatc aaattccaca
     1441 gggtacacgc cgctctccgt cgtcgtgtag ttgcccgcaa acgcgccatt cgagtacgtc
     1501 aacgtgacat tcgcctgagc cttcgacggc gaggtcacca gggcccacgc ctggaacgtc
     1561 gatacgtccg tc
//
LOCUS       DATLMA010000438         1512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_41421, whole genome shotgun sequence.
ACCESSION   DATLMA010000438 DATLMA010000000
VERSION     DATLMA010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41421"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VNA10_05640"
     CDS             complement(<1..983)
                     /locus_tag="VNA10_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37195.1"
                     /translation="MTLALALVLLIQVPSIGPRSAPMAAAPIGAPVTFRTDATETEIA
                     AAGARLVASYDAFSVARGSEGTLAVLRAHGRYAEPFARASELQFAAGTVDVAAFSAQS
                     VPWSLDSDRMAVGVIHLVAPIKSTWQAELASRGISLLRYVPQDGFVVRGRLSDLLDAS
                     AVPYVDWVGPYEPTWKIRPGTPAVGVVDVRMVVLPGESPSMIEAWLGHAGIPLDTRAR
                     TGPALLGAFGSGDFQWVRARIPAGLVPSLAALPAVEFVDPVVPVHPLNQETDWVIQTN
                     LTGNDRYWTFGLDGTGQVIGMADTGLDYDGEQFRQAPTTVTLGDIYNTTDLA"
     gene            complement(1135..>1512)
                     /locus_tag="VNA10_05645"
     CDS             complement(1135..>1512)
                     /locus_tag="VNA10_05645"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37196.1"
                     /translation="KMYAMNLKRSLNYDILVVDSLPVLEVMSRFENPREDLFQLFEWI
                     RDLKATTILISEMKPGSEDFGKNGEEYLSDGIIHTKMERVDDANIQRRIRCVKLRGTN
                     HSPNYYTLIFQSGILQATRIIAE"
BASE COUNT          277 a          465 c          491 g          279 t
ORIGIN      
        1 gccaggtccg tggtgttgta gatgtctccc agggtgaccg tcgtcggtgc ttgccggaac
       61 tgttcgccgt catagtcgag accggtgtca gccatgccga tcacttgtcc ggtcccgtcg
      121 aggccgaacg tccaataccg gtcgtttccg gtgaggttcg tctggatcac ccagtcggtt
      181 tcctggttca acggatggac gggcacgacc ggatcgacga actcgaccgc ggggagagcc
      241 gccagcgagg gcacgaggcc tgccgggatt cgagcgcgga cccactggaa atccccgctt
      301 ccaaacgcac ccaggagggc ggggccggtt cgcgcgcggg tgtccagcgg aatccccgca
      361 tgcccgagcc aagcctcgat catcgaagga ctttctcccg gaaggacgac catgcgcaca
      421 tccacgacac cgacggccgg tgttcccggt cggattttcc acgttggttc gtacggccca
      481 acccaatcca cgtaggggac cgccgacgca tcgagcaggt ctgaaagtcg accgcggacg
      541 acgaacccat cttgcgggac atatcggagg agcgagatcc ctcgagacgc gagctcggcc
      601 tgccacgtgg acttgatcgg ggccacgaga tggattacgc cgacggccat cctgtccgaa
      661 tcgagggacc acgggacgga ttgagcggag aacgccgcaa cgtcgacggt cccagccgca
      721 aactgaagtt ccgatgcccg cgcgaacggt tctgcgtagc ggccgtgggc tcggaggacc
      781 gcgagggttc cctcggagcc gcgcgcgacc gagaacgcgt cgtaggatgc gacgagtcgg
      841 gcgccggccg ccgcgatttc tgtctcggtc gcgtccgtgc ggaacgtcac gggggctccg
      901 atcggggccg ctgccatcgg tgcggatcgc gggccgatcg agggcacttg gatgaggagg
      961 acgagggcga gcgcgagagt cacgagaata cgcacgacga gaagggccgt gtggccgtgc
     1021 ctccttttcg gaagcgcagg cggcttgacc tgtgcctcgg attcgcggga tgcgacggcg
     1081 cgcacattag gcttttggcc caaattcgga atcgagccga gatccgtttc ctggctactc
     1141 ggcgatgatg cgcgtcgctt gaagaatccc actttgaaag atgagcgtgt agtagttcgg
     1201 cgaatgattc gttccgcgca acttcacaca tcggatccgc cgctggatgt tcgcgtcgtc
     1261 gacgcgctcc atcttcgtgt ggatgattcc atcgctcaga tactcctcac cgttcttccc
     1321 gaagtcctcg ctgcccggtt tcatctcgct gatcaggatc gtcgtcgcct tcagatcgcg
     1381 gatccactcg aacagctgga agagatcctc acgcgggttt tcgaatcgcg acatgacctc
     1441 gaggaccggc agcgaatcga cgacgaggat gtcgtagttc agggaccgct tcaagttcat
     1501 cgcgtacatc tt
//
LOCUS       DATLMA010000439         1099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_523122, whole genome shotgun sequence.
ACCESSION   DATLMA010000439 DATLMA010000000
VERSION     DATLMA010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523122"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VNA10_05650"
     CDS             complement(<1..676)
                     /locus_tag="VNA10_05650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37197.1"
                     /translation="MVSSQSLAKSIVKGSLRPKPDEVVLISTYPHTIELAEQTALECQ
                     KAGADPALWLETDALFYGNFKNYSVESLHRVSGHCVGLLDYVNSYIWFFGPRDPAPMA
                     TVPREKFAASFEGEKAHSDKAYEKMPKNVAVGIGAVTRERAKAYSFNYAKWKAMVEAA
                     TVVNQERLASLGNLVAGLISRPVDVRVTGDNGTKLKFRLAGPERKPFVHDGVISDEDL
                     AVGTLAA"
     gene            800..>1099
                     /locus_tag="VNA10_05655"
     CDS             800..>1099
                     /locus_tag="VNA10_05655"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HVG37198.1"
                     /translation="MEGKRLAIGSTAVVVGLVVLSMSNAVAARIVFSTPLVIGWTAGN
                     DWEPDVAADGSGNAYVAWGHFGGVPGCTTCSSPAAMIQISHDGGKTWGAPKPLNPT"
BASE COUNT          186 a          353 c          347 g          213 t
ORIGIN      
        1 gggccgcgag cgtgccgacc gcgaggtcct cgtcactgat cacgccgtcg tggacgaagg
       61 gcttccgctc gggtccggcg agacggaact tcaatttcgt cccgttgtcc ccggtcaccc
      121 ggacgtcgac gggtcgcgaa atgaggcctg cgaccaggtt gcccagagac gcgagccgct
      181 cctggttgac gaccgtcgcg gcttcgacca tcgccttcca ttttgcgtaa ttgaaactgt
      241 acgccttggc ccgctcccgg gtgaccgcgc cgatccccac cgcgacgttc ttgggcatct
      301 tctcgtacgc tttgtcggag tgggcctttt ccccttcgaa gctcgcggcg aacttctccc
      361 gagggacggt cgccatgggg gcgggatcgc gagggccaaa gaaccagatg tacgagttca
      421 cgtagtcgag caggccgacg caatgacccg acacccggtg aaggctctcg acggagtaat
      481 ttttgaaatt gccatagaac agggcatccg tctcgagcca gagcgccgga tcggcccccg
      541 ctttctgaca ttccaacgcg gtctgctccg cgagttcgat cgtatgcgga tacgtcgaga
      601 tgagcacgac ctcgtccggt ttcggtcgaa ggcttccctt cacgatgctt ttcgccaagc
      661 tttgcgagct gaccatggga tcccctggcc ccgtatgctc gatgaagcat aaacggattc
      721 cgggtgcgac gctctcaggt tcgcgcggga gagtgaacgc ttatgccatg gacccgcctt
      781 cctgcgcgag ggttctgaca tggaggggaa gcgtctcgcc atcggctcga cagccgtcgt
      841 ggtcggtctg gtcgtcctct cgatgtcgaa cgcggtcgcg gcacggatcg tcttcagcac
      901 gccgctcgtc atcggctgga ctgcaggaaa tgattgggag ccggacgtcg ccgccgacgg
      961 cagcggcaac gcctacgtcg cgtggggcca cttcggtgga gtccccggct gcacgacgtg
     1021 ctccagtccg gcggcaatga ttcagatttc ccacgacggc ggcaagacat ggggcgcgcc
     1081 gaagccgctc aacccgacc
//
LOCUS       DATLMA010000440         1058 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_407745, whole genome shotgun sequence.
ACCESSION   DATLMA010000440 DATLMA010000000
VERSION     DATLMA010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407745"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VNA10_05660"
     CDS             complement(<1..482)
                     /locus_tag="VNA10_05660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter, permease protein
                     PstA"
                     /protein_id="HVG37199.1"
                     /translation="MTFRFDRDTRRRWFDVAMSVAALACVGIAILPLGSILFEASVRG
                     AQAITPSFLTLPAGSGGIANSIQGTLVLIGLTGLVALPVGILTGIYLAEFGRNRIGGA
                     VRFFVDVMTQIPSIVVGIFAYSFVLELGIAGIVSRRLVFSTITAVIALSTIMIPFVAR
                     T"
     gene            complement(479..>1058)
                     /gene="pstC"
                     /locus_tag="VNA10_05665"
     CDS             complement(479..>1058)
                     /gene="pstC"
                     /locus_tag="VNA10_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011523776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HVG37200.1"
                     /translation="PSVVYGLWGIFVLAPVMRVYIEPSVQAILGFLPLFRGNPIGSDV
                     FTAGVILAVMIIPTISSVSREALLAVPDTQREAALSLGATRWETTRLAVLRYARAGIF
                     GAVVLGLGRAVGETMAVTMTIGNRNAIFTSLFDPGQTISSLIANNWLEAGSLELSALI
                     ELGLVLMLVSLLINAFARFMVGRVLHVGEGAE"
BASE COUNT          228 a          342 c          337 g          151 t
ORIGIN      
        1 gtccgggcga cgaaagggat catgatggtc gacaacgcga tgacggccgt gatcgtgctg
       61 aagacgagac gcctcgacac aatgcccgcg atcccgagct ccaatacgaa ggaatacgca
      121 aagattccga cgacgatcga cggaatctgg gtcatgacgt cgacgaagaa ccggaccgcc
      181 ccgccgattc ggttccgccc gaactcggcc aggtagatgc cggtgaggat gccgaccggg
      241 agggccacca agccggtgag tccgatcagc accagcgttc cttggatcga attcgcgatg
      301 ccgccactgc cggcggggag cgtcaggaag ctgggcgtga tggcctgcgc tccccggacc
      361 gaggcctcga agaggatgct ccccaacggg aggatggcga ttcccacaca cgccagcgcc
      421 gcgacactca tggcgacatc gaaccaccgt cgccgggtgt ctcgatcgaa tcgaaaggtc
      481 actcggcgcc ctccccgacg tgcaagactc gtccgaccat gaagcgtgcg aacgcgttga
      541 tcagaaggga cacgagcatg aggacgagtc ccaactcgat cagcgcgctc agctccaacg
      601 agccggcctc gagccagttg ttcgcaatca agctggagat cgtttgtccc ggatcgaaca
      661 acgaggtgaa gatcgcgttc cggttcccga tcgtcatcgt gaccgccatc gtctccccga
      721 ccgcacgccc gagtccgagg acgaccgcgc caaagattcc cgcgcgggcg tatcggagga
      781 ccgcgagacg cgtcgtctcc catcgggtcg ccccgaggct gagggcggcc tcccgctggg
      841 tgtccggcac cgcgagaagc gcttcccgcg agacggatga gatcgtcggg atgatcatga
      901 ccgcgaggat gacgccggcc gtgaacacat ccgagccgat cggatttcct cgaaacagcg
      961 gcaagaaccc gaggatcgct tggacggatg gctcgatgta gacccgcatg accggggcta
     1021 gcacgaaaat cccccagagg ccgtagacga ccgacggc
//
LOCUS       DATLMA010000441         1020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_100692, whole genome shotgun sequence.
ACCESSION   DATLMA010000441 DATLMA010000000
VERSION     DATLMA010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100692"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VNA10_05670"
     CDS             <1..646
                     /locus_tag="VNA10_05670"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HVG37201.1"
                     /translation="IFTTAADGQTSVEVHVLQGERAMAGDNVSLGRFYLTGVPPAPAG
                     VPKIEVTFDIDANGILNVSAKDMATGKTEKLTIVAPQRMDKGKIDSAVRDAESHAEED
                     RRRREFVELRNHADQLVYATEKLLKEHGSAISEGTRKAVEEKLEALRKVLTTDDISVL
                     RAAIDALNQEAQRIGVEMYGKGGPAEAPPPGAGDSSGSSGPGVVDADFEDVDKK"
     gene            677..>1020
                     /locus_tag="VNA10_05675"
     CDS             677..>1020
                     /locus_tag="VNA10_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HVG37202.1"
                     /translation="MADEDYYERLGVPRGASKDEVKRAYRRLAKKHHPDLNKDNPKAA
                     EEKFKQISEAYEVLADDEKRRIYDQFGADGLKQQVWGGEGFDWSRFTHAGDVEDIFGR
                     DLFASFFGQSGGL"
BASE COUNT          208 a          319 c          359 g          134 t
ORIGIN      
        1 gatctttacg accgcggcgg acggccagac gagcgtcgag gtccatgtgc tccagggcga
       61 acgcgccatg gccggagaca acgtgagcct gggtcggttc tatctcaccg gcgtcccgcc
      121 ggcgcccgcc ggcgtcccga agatcgaggt caccttcgac atcgacgcga atggcatcct
      181 gaacgtctcc gcgaaggaca tggcgaccgg gaagacggaa aaactcacga tcgtggcccc
      241 ccagcggatg gacaagggga agatcgactc cgccgtccgc gatgcggaga gccacgcgga
      301 ggaggaccgg cgtcgccgcg agttcgtgga gttgcggaac catgcggacc aactcgtcta
      361 cgcgacggag aagctcctga aggagcacgg ctccgcgatc tccgaaggca cccgcaaggc
      421 cgtcgaggag aagctcgagg ccctccggaa ggtcctgacc acggacgaca tctccgtgct
      481 ccgcgcggcg atcgacgccc tgaaccagga ggcgcagcgg atcggcgtcg agatgtacgg
      541 gaaaggcgga ccggcggaag ctcccccgcc gggtgccggc gactcgtccg gatcatcggg
      601 cccgggcgtc gtggacgcgg acttcgagga cgtagacaag aagtgagcgg ggccgtcccg
      661 cgggaagaag cgccacatgg ccgacgaaga ctactatgag aggctcggcg tccctcgcgg
      721 ggcgtccaag gatgaggtca agcgagccta ccgccggctc gcgaagaagc accatccgga
      781 cctgaacaag gacaacccga aggccgcgga agagaagttc aagcagatct ccgaggcgta
      841 cgaggtcctc gcggacgacg agaagcgtcg catctacgac cagttcggcg cggacggcct
      901 caaacagcag gtctggggcg gcgaaggctt cgactggtcc cggttcactc atgccgggga
      961 tgtcgaggac atcttcggcc gggacctgtt cgcgtcgttc ttcggtcaaa gcggggggct
//
LOCUS       DATLMA010000442         1808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_221714, whole genome shotgun sequence.
ACCESSION   DATLMA010000442 DATLMA010000000
VERSION     DATLMA010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221714"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VNA10_05680"
     CDS             <1..330
                     /locus_tag="VNA10_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37203.1"
                     /translation="RLTDEEAAELGRWVGRNLIPEFITFWFKEVNLQALVIGYPRLQS
                     RYGHAFEYEEHVEAGKWTIILKHSAGAKWSVYYEGLLKTAFQNLLQTDLAIEKTDNQV
                     VARFTIR"
     gene            complement(368..616)
                     /locus_tag="VNA10_05685"
     CDS             complement(368..616)
                     /locus_tag="VNA10_05685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37204.1"
                     /translation="MVHLAGPMGLKENKLYQAAYWKAFEDFFGKQNSAVVKAMMLAKN
                     PKADTGTAEIDRVCFGLRQTMGWLAEAIEKKALSSLGH"
     gene            complement(643..1392)
                     /locus_tag="VNA10_05690"
     CDS             complement(643..1392)
                     /locus_tag="VNA10_05690"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37205.1"
                     /translation="MMAEKVLVRPALDPDARASTGIPGLDDMLEGGFPVGSLITLAGR
                     PGTGKTIFGSQFLYQGAREAGEPGMYVSMLEGRKAYFRNMTRLGLDLPPLEKKDLFRF
                     LEMPTLSAEGLPAIWEEIVRNIDEAGIVRLVIDSFTAMSQAFGTQGDIRVFTHMLLGK
                     IIGGAGCTTLMITESAPGFLGAEVPNPGMQEFIADGVVHFHLVPVAGDARVRYIEITK
                     MRGTNHQMGPIPIDIGNRGISVRSIHIPGRK"
     gene            complement(1389..>1808)
                     /locus_tag="VNA10_05695"
     CDS             complement(1389..>1808)
                     /locus_tag="VNA10_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37206.1"
                     /translation="LDTVENFYGQGVMNFLATVASRAAVNKDIQSIVARPNLQLTQKV
                     ANISQIHLVLSQRWGTLILYGVKPRTGFYALQFTFGHGYPEFELIPLDDISLTAEAAT
                     EKERPPSVTFPHRRHEVRADFFEAVMDSLNPSKKGAT"
BASE COUNT          320 a          584 c          563 g          341 t
ORIGIN      
        1 cgcctgaccg acgaggaggc ggccgagctc gggcgatggg tgggacggaa tctcatcccg
       61 gagttcatca ccttctggtt caaggaagtg aacctccagg cgttggtgat cggctatccg
      121 cgccttcagt cccggtacgg ccacgccttc gagtacgagg aacacgtgga agccggcaag
      181 tggacgatta tcctcaagca cagcgccggc gcaaagtggt ccgtatatta cgaaggattg
      241 ttgaagaccg cgttccaaaa cctgttgcag acggatctcg caatcgagaa gacggacaac
      301 caagtggttg cgcggttcac catcaggtga cccgcctcga tgcgggtgcc tccggtaaat
      361 ccggttccta gtggcccaga ctcgacaagg ctttcttctc gatcgcttcc gcgagccatc
      421 ccatcgtctg ccgaaggccg aagcagacgc ggtcgatctc agccgtgccg gtgtccgcct
      481 tcgggttctt ggcgagcatc atcgccttca cgaccgccga gttctgtttc ccgaagaagt
      541 cttcgaaggc cttccagtag gcggcctggt acagtttgtt ctccttcagc cccatcggtc
      601 cggccagatg taccacgaac acgcccccca aacggcagcc cgctacttcc gcccggggat
      661 gtgtatggac ctgaccgata ttccgcggtt cccgatgtcg attggaatgg gtcccatttg
      721 gtggttcgtc ccccgcatct tcgtgatctc gatgtagcgg acccgcgcat ccccggccac
      781 cggcaccagg tggaagtgga cgacgccgtc cgcgatgaac tcctgcatcc cggggttcgg
      841 gacctcggcc ccgaggaacc cgggcgcgct ctccgtgatc atcagcgtcg tgcagccggc
      901 ccctccgatg atcttcccga ggagcatgtg cgtgaacacg cggatatcgc cctgggtccc
      961 gaaggcctgg gacatcgccg tgaaggagtc gatgaccaag cggacgatcc ccgcctcgtc
     1021 gatgttgcgg acgatttcct cccagatcgc gggcaggcct tccgcgctca gcgtgggcat
     1081 ctcgaggaac cggaacaggt ccttcttctc gagcggcggg aggtcgaggc cgaggcgggt
     1141 catgttgcgg aagtatgcct tgcgcccttc cagcatggag acatacatcc cgggctcccc
     1201 cgcctcccga gcgccttgat acaggaattg ggaaccaaag atcgtcttgc ccgtccccgg
     1261 ccggcccgcg agggtgatca ggctcccgac ggggaagccc ccttcgagca tgtcgtcgag
     1321 cccggggatc cccgtggacg cgcgcgcgtc cgggtccaac gcgggccgga cgagcacctt
     1381 ctccgccatc atgtggcccc cttcttggac gggttcaggg agtccatgac ggcttcgaag
     1441 aagtccgccc ggacctcgtg acgacggtgc gggaacgtca cggacggggg ccgctctttc
     1501 tccgtagccg cctccgcggt caacgagatg tcatccaggg gaatcagctc gaactcggga
     1561 tacccgtgcc cgaaggtgaa ctggagtgcg tagaatccgg tccgcggctt gacgccgtac
     1621 aggatcaacg tgccccagcg ctggctgagc acgagatgga tttgcgagat gttcgcgacc
     1681 ttctgcgtca gctgcaagtt tggccgggcc acgatcgact ggatgtcctt gttcacggcg
     1741 gcccgcgacg cgaccgtcgc gaggaagttc atcacgccct gcccgtagaa attctcgacg
     1801 gtgtcgag
//
LOCUS       DATLMA010000443         2230 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_407886, whole genome shotgun sequence.
ACCESSION   DATLMA010000443 DATLMA010000000
VERSION     DATLMA010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407886"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VNA10_05700"
     CDS             complement(<1..590)
                     /locus_tag="VNA10_05700"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37207.1"
                     /translation="MTKGSDGGEGLPGDILIFAEHLEGRVAPSTLEVIAVGRELGSRS
                     GAHARVALFGHDVRVLADVLAGTGTEVLLADDPALAEYTPDGYGQAARAVVESANPRL
                     ILVAHTSQGYDLAPALAGAMDLPLVTNCLALRFDGERLVATRRLLNEKVQAEVEIASS
                     RPIVATVRPGSVKPAGPAAGGTVTVTPVRVDPSKART"
     gene            complement(565..1362)
                     /locus_tag="VNA10_05705"
     CDS             complement(565..1362)
                     /locus_tag="VNA10_05705"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HVG37208.1"
                     /translation="MPLNIVVCLKQIPNPDLQFQIAPDGKDIKRDALNYKLNGADEYA
                     LEEAVRLKEKSGGRVIALTAGPKRTEQMLREALAKGADEVTRIAFDEAAAYDIGKVSR
                     LLAAAIRTMPHDLVLTGVQSDDLVNSAAGGLVAGLLGLPHASVVTRVEVKGNGLEVAC
                     ELEGGLQRLYSVGLPAVLTIQFGANTPRYAPLPAIMKAARQPIKELSPAALGFASWEA
                     VPLPYTFAVRTLSPPAAKGHAEMITGSVDEQAKKLAQFLRDKGFGRR"
     gene            1420..1815
                     /locus_tag="VNA10_05710"
     CDS             1420..1815
                     /locus_tag="VNA10_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HVG37209.1"
                     /translation="MVDTPWRSLSTPDRGREYLALLSYLPLKGFRKLLTLQRQSSKVG
                     KQLAETHGLVGYSFRAKLSSHRFWTLSVWEDEQALMAFVGRDPHRATMGLLQRYMGES
                     AFTRWTIRGSDVPPSWDEAIRRSDAAATK"
     gene            complement(1850..>2230)
                     /locus_tag="VNA10_05715"
     CDS             complement(1850..>2230)
                     /locus_tag="VNA10_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012192034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37210.1"
                     /translation="APCALEGILTSENAPRIKGKIVAEGANGPTTPEADDILHKRGIL
                     VIPDILANGGGVTVSYFEWVQNLSEFFWTKKEVDEKLEGIMVSAFNRVWEMRETKKID
                     MRQAAYMVAIARVVEAYKWRGIFP"
BASE COUNT          360 a          736 c          728 g          406 t
ORIGIN      
        1 gtccgggcct tcgacggatc gactcggacc ggcgtcacgg tgactgtccc gcccgcggcc
       61 ggccccgccg gtttcaccga gccaggtcgc acggtcgcca cgatcggccg gctcgatgca
      121 atctccactt ccgcctggac cttctcgttc aggaggcggc gggtggcgac caagcgctcg
      181 ccgtcgaagc gcaaggcaag gcaattcgtg accagcggaa gatccatcgc accggcgagt
      241 gcaggcgcga ggtcgtagcc ttgggacgtg tgggccacga ggatgagacg ggggttcgcg
      301 ctctcgacta cggcgcgcgc cgcttgaccg tatccatcag gcgtgtattc cgccaacgcc
      361 gggtcgtccg cgaggaggac ctcggtcccc gtgccggcga ggacgtcggc gagaactcgc
      421 acatcatgtc cgaagagcgc aacacgggcg tgggctcccg aacgggatcc gagttcccga
      481 ccgaccgcga tcacctccaa ggtcgatggc gcgacgcggc cttccaggtg ttccgcgaag
      541 atcaggatgt cgcccggcag tccctcacct ccgtccgaac cctttgtcac ggaggaactg
      601 ggcgagcttc ttcgcctgct cgtcgacgga accggtaatc atctctgcgt ggcccttcgc
      661 cgcgggcggc gacagagttc gtaccgcgaa tgtgtacggg agggggacgg cctcccagga
      721 tgcgaagccg agcgccgcgg gggagagctc cttgattggc tgacgggccg ctttcatgat
      781 cgcggggagc ggcgcgtacc gcggcgtgtt cgcgccgaat tggatcgtga gcacggccgg
      841 gagcccgacc gaatagagcc gttgcagtcc gccttcgagc tcgcaggcga cctcgagccc
      901 gttgcctttc acctcgacgc gcgtcacgac gctcgcatga gggaggccga ggaggcccgc
      961 gacgagtccc cccgccgccg aattgacgag atcgtccgac tggactccgg tcagaacgag
     1021 gtcgtgaggc atcgtccgaa tcgccgccgc gaggaggcgc gagaccttgc cgatgtcgta
     1081 cgcggccgcc tcgtcgaacg cgatccgagt gacctcgtcc gcccctttcg cgagcgcctc
     1141 gcgcaacatc tgctcggtgc gcttcgggcc ggcggtcagc gcgatgaccc gacctccgga
     1201 tttctccttg agccggacgg cctcctcgag cgcgtactcg tccgcgccgt tcagcttgta
     1261 gttgagcgcg tcgcgcttga tgtcctttcc gtcgggcgcg atctggaact gcaaatccgg
     1321 attcggaatc tgtttcaggc acacgacgat gttcagcggc acggcgcgcg ggcgtagaag
     1381 aggacgctat ttaatcgtgt cgtgcgattc gagtcgacga tggtcgacac accgtggcgg
     1441 tccctttcga cgcccgaccg cggacgtgag tacctcgccc tgctctcgta cctcccactg
     1501 aagggatttc gcaagttgct cacgctgcag cggcaatcga gcaaggtcgg caagcagctc
     1561 gcggaaactc acggcctcgt cggttactcg ttccgcgcga agctatcgag ccaccgtttc
     1621 tggacgcttt ccgtctggga agacgagcag gcgctgatgg cgttcgtcgg tcgagatccg
     1681 caccgagcga ccatgggcct gcttcaacga tacatgggcg agagcgcgtt cacgcgatgg
     1741 acgatccgcg gttctgatgt cccgccctcg tgggacgagg cgatccggcg atccgacgcc
     1801 gcggcgacga aatgaaagag cggcaggttt cgggcctgcc ttcgtccgtc taggggaaaa
     1861 tcccgcgcca cttgtacgct tcgacgacgc gggcgatcgc caccatgtaa gcggcctggc
     1921 gcatgtcgat cttcttcgtc tcccgcatct cccagacgcg gttgaaggcg ctcaccatga
     1981 tgccttcgag tttctcgtcg acttccttct tcgtccagaa gaattcggac aggttctgca
     2041 cccactcgaa gtacgagaca gtcacgccgc ctccgttggc gaggatgtcc gggatcacga
     2101 ggatgccccg cttgtgcagg atgtcgtccg cctcgggcgt cgtcgggcca ttcgcccctt
     2161 ccgcgacgat cttccctttg atgcggggtg cgttctccga ggtcaggatg ccttcgaggg
     2221 cacacggcgc
//
LOCUS       DATLMA010000444         1106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_461229, whole genome shotgun sequence.
ACCESSION   DATLMA010000444 DATLMA010000000
VERSION     DATLMA010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461229"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1106
                     /locus_tag="VNA10_05720"
     CDS             <1..>1106
                     /locus_tag="VNA10_05720"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HVG37211.1"
                     /translation="DDQARTISGTVTHRLSPINDGLTEVALDAGDLNIHKVVDDGGHE
                     LECELHGETLSIHLPKARKAGQAFELRISYDAKPLKGIFFTGPDKANPKRPRITWTQG
                     EDMDNRYWFPSYDYPNQRFTSEVLATVDEKYEALSNGHLVDVSADKRRKTKTYHWSLD
                     QPHSNYLIALAVGEFESKEWDADGVPVLAHVPKGLGPFLDRAFQNVPDMVRYFGEVTG
                     QKYPWPRYAQVCVPEFVVGGMENTSMTTLTEYCLTDEKAYDDYRPEGLLSHELAHQWF
                     GDFLTCRAWGHIWLNESFATYFQVLWWEHFFGKDDALMELEADRDSYREEASKNYKRP
                     IVTMKFVEPSDMFDRHTYEKGANVLHMMRNELGD"
BASE COUNT          243 a          357 c          331 g          175 t
ORIGIN      
        1 gatgaccagg cgcgcacgat ctccggaact gtcacccatc gcctctcgcc gatcaatgac
       61 ggcctcaccg aggtcgcgct cgacgcggga gacctgaaca tccacaaggt cgtcgacgac
      121 gggggccacg aactcgagtg cgagctccac ggagagaccc tctcgatcca tcttccgaaa
      181 gcgcgcaaag ccggccaggc cttcgaactt cggatctcat acgacgcgaa gccgctgaaa
      241 ggaatcttct tcaccggacc ggacaaggcg aacccgaagc ggccccgcat cacatggacg
      301 cagggagaag acatggacaa ccgctactgg ttcccctcat acgactatcc gaaccaacgc
      361 ttcacatccg aggtcctcgc gaccgtcgac gagaagtacg aggcgctcag caacggccat
      421 ctcgtggacg tatccgccga caagcgccgc aagacgaaga cctatcattg gtcgctggac
      481 cagccacact cgaactacct gatcgccctc gcggtcggtg aattcgagtc gaaggagtgg
      541 gacgcggacg gggtgccggt cctcgcgcac gtgccgaaag ggctcggtcc gttcctggac
      601 cgcgcgttcc agaacgtgcc cgacatggtg cggtatttcg gcgaggtgac cggccagaag
      661 tatccgtggc ctcggtacgc ccaagtctgc gtccccgagt tcgtcgtcgg cggcatggag
      721 aacacctcga tgacgacgct gaccgagtac tgcctcacgg acgagaaggc ctacgacgac
      781 tatcggcccg aggggctcct ctcccacgaa ctcgcccacc agtggttcgg agacttcctc
      841 acgtgccggg cgtgggggca catctggctg aacgaatcct tcgccacgta cttccaggtc
      901 ctgtggtggg aacacttctt cggcaaggac gacgcgctca tggagctcga ggcggaccgg
      961 gacagctatc gcgaggaagc gagcaagaat tacaagcggc caatcgtcac gatgaagttc
     1021 gtcgaaccgt ccgacatgtt cgatcgccac acctacgaga agggcgcgaa cgtgttgcac
     1081 atgatgcgga acgaactcgg cgacga
//
LOCUS       DATLMA010000445         1270 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_41963, whole genome shotgun sequence.
ACCESSION   DATLMA010000445 DATLMA010000000
VERSION     DATLMA010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41963"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VNA10_05725"
     CDS             complement(<1..839)
                     /locus_tag="VNA10_05725"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HVG37212.1"
                     /translation="MAKRDLVFRIGGAAGDGVSSTAESFAKISARSGLHTWTYSSYQS
                     VIRGGHVWTQIRGGLDPVLSHGVDPDVVVCLNQQTMDVHQGQVNESGAIVYDTDGTKP
                     DPSKIREKVRLLGIPLRKKAQSISPNALMRNTVALGAAVRLFDMDFRHVESAFKDIWG
                     DKKPEIVQQNIQAAKLGAGAVVEMGGSLNLGLPYPNEPKYLMTGNEAICLGALAAGVK
                     FLAQYPMTPASSILHWMASHGPPHGVVVKQVEDELAAMNMAVGAGFAGVRSMTATSGG
                     GFSL"
BASE COUNT          224 a          385 c          396 g          265 t
ORIGIN      
        1 agcgagaatc caccgccgga cgtcgcggtc atcgagcgca ccccggcgaa gcctgcgccg
       61 accgccatgt tcatcgcggc gagctcgtcc tcgacctgct tgacgacgac gccgtgcggc
      121 gggccatgag aggccatcca atggaggatc gacgaggccg gcgtcatcgg gtactgcgcg
      181 aggaacttca cgcccgcggc gagcgcaccg aggcaaatcg cctcgttccc ggtcatcaga
      241 tacttgggct cattgggata cggcagtccg aggttgagcg aaccgcccat ctccacgacc
      301 gcgccggccc cgagcttcgc ggcctggatg ttttgctgca cgatctcggg tttcttgtcc
      361 ccccagatgt ccttgaaggc gctctcgacg tgccggaagt ccatgtcgaa caggcgcaca
      421 gccgcgccga gggcgaccgt gttccgcatc agcgcgttcg gggagatgct ctgcgccttc
      481 ttccgaagcg ggatccccag gaggcggacc ttctcccgga tcttgctggg atccggtttc
      541 gtcccgtccg tgtcgtacac gattgcgccg ctttcgttga cttgcccttg gtgaacgtcc
      601 atcgtctgct ggttcaggca cacgaccacg tccgggtcga cgccatggga caggactgga
      661 tcgaggcctc cccggatctg ggtccagaca tggccaccgc ggatcacgct ctgatacgac
      721 gaataggtcc aagtgtgcag cccgctccgg gcgctgatct tcgcgaagct ctccgcggtc
      781 gacgagacgc cgtctcctgc ggcgccgccg atgcgaaaga caaggtctct cttggccatc
      841 cggaatccca ccacgtgggc tcagtcggtt ctcgggttcc cgccatcaac gccgtccgaa
      901 tttaatatac tcttgcatgt gatggcgtcc caacttgatt ttgcaacccg gccgcccagg
      961 gacaccacgc ggtcacgtcc cggtggtcgg ttcgagagca agtaaaaagt accatgcgtc
     1021 ggtatggatg aaaggggagg aagtttgtga tggcggaaca tgggtcagaa aatggtcgcg
     1081 agatctggag aaaattcttg cgaaggcatt ggacaatgct ggttttgttc gcggcaggag
     1141 ccgtcttggt atcgacgggt gcaattctgg tcgctctgtg gttcgtcgga gacgctcaat
     1201 caagtggtct cgtacctagg acgttgggcc tatggtcaat gggatcttcg gtgactttct
     1261 tgttacggtt
//
LOCUS       DATLMA010000446         1413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_461264, whole genome shotgun sequence.
ACCESSION   DATLMA010000446 DATLMA010000000
VERSION     DATLMA010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461264"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1413
                     /locus_tag="VNA10_05730"
     CDS             <1..>1413
                     /locus_tag="VNA10_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG37213.1"
                     /translation="TQKKRELEEQWRNSENVEEQPEVGEEEIADIVSMWTGIPVFKLT
                     EAESARLVRMEEEIERVRKEKEESIEAQEFEKAASLRDKERKLTQKKRELEEQWRNSE
                     NVEEQPEVGEEEIADIVSMWTGIPVFKLTEAESQRLIRMEDELHKRVVGQEEAIIAVS
                     KSIRRARAGIKDPKRPSGSFIFLGPSGVGKTELARTLAEFLFGDEDAMLQVDMSEYME
                     KHSVSRLVGSPPGYIGYDEGGQLTEAVRRKPYSVLLLDEIEKAHPDVFNILLQILEEG
                     KLTDAQGRRVDFRNTIVIMTSNIGAAQISKNQGFGFSVGEENGLSYDEMKSRVMGELK
                     KVFRPELLNRIDEIIVFHKLSKEEITVIIDLNMRRLREQMALHSVTIELTDEAKELLV
                     DKGYDPAMGARPLRRAIQRVIEDPLADFVLGRTVEPGSTILVSRKGETEEVDMTVIPG
                     EVTPEHVVTVPPEEPVASGAD"
BASE COUNT          291 a          421 c          499 g          202 t
ORIGIN      
        1 acgcagaaga agcgagagct cgaggagcag tggcgcaact cggagaacgt cgaggagcag
       61 cccgaggtcg gcgaggaaga gatcgccgac atcgtctcga tgtggacggg catcccggtc
      121 ttcaagctca ccgaggcgga gtccgcacga ctcgtgcgca tggaagagga gatcgagcgc
      181 gtccgcaagg agaaggaaga gtcgatcgag gcgcaggagt tcgagaaggc ggcgtcactc
      241 cgcgacaagg agcggaagct cacgcagaag aagcgagagc tcgaggagca gtggcgcaac
      301 tcggagaacg tcgaggagca gcccgaggtc ggcgaggaag agatcgccga catcgtctcg
      361 atgtggacgg gcatcccggt cttcaagctc accgaggccg agtcgcagcg gctcatccgc
      421 atggaggacg agctgcacaa gcgcgtcgtc ggccaggaag aggcgatcat cgccgtctcg
      481 aagtcgatcc gccgcgcgcg ggccggcatc aaggacccga agcggccgag cggctcgttc
      541 atcttcctcg gcccgtccgg cgtcggcaag acggagctcg cgcgcacgct ggccgaattc
      601 ctcttcggcg acgaggacgc gatgctccag gtcgacatgt cggagtacat ggagaagcac
      661 tccgtgtcgc ggctcgtcgg gtcgcctccg ggttacatcg ggtacgacga aggcgggcag
      721 ctgaccgagg ccgtgcgccg caagccgtac tcggtgctgc tgctcgacga gatcgagaag
      781 gcgcatccgg acgtgttcaa catcctgctc cagatcctgg aggaggggaa gctgacggac
      841 gcccaggggc gccgcgtcga cttccggaac acgatcgtga tcatgacgtc gaacatcggc
      901 gccgcgcaga tctcgaagaa ccagggcttc ggtttttcgg tgggcgagga aaacggtctg
      961 tcgtacgacg agatgaagtc ccgcgtgatg ggcgagctca agaaggtgtt ccgccccgag
     1021 ctgctcaacc gcatcgacga gatcatcgtc ttccacaagc tctcgaagga agagatcacg
     1081 gtgatcatcg atctcaacat gcgccggctg cgtgagcaga tggcgctgca cagcgtgacg
     1141 atcgaactta cggacgaggc gaaggagctg ctcgtcgaca agggctacga cccggcgatg
     1201 ggcgcgaggc cgctgcgccg cgcgatccag cgcgtgatcg aggatccgct cgcggacttc
     1261 gtgctcggcc ggacggtcga gcccggctcg acgatcctcg tctcgcgcaa gggcgagacc
     1321 gaagaggtcg acatgacagt catcccgggc gaggtcacgc ccgagcacgt cgtcacggtt
     1381 ccgccggagg agcctgtggc ttccggcgcg gac
//
LOCUS       DATLMA010000447         1309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_42129, whole genome shotgun sequence.
ACCESSION   DATLMA010000447 DATLMA010000000
VERSION     DATLMA010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42129"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /gene="prf1"
                     /locus_tag="VNA10_05735"
     CDS             complement(<1..894)
                     /gene="prf1"
                     /locus_tag="VNA10_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor aRF-1"
                     /protein_id="HVG37214.1"
                     /translation="MSEMSGMDKYKFRRALEQIEEAAGRGTELVSVYIPPGRPISDVT
                     NYLRAELSQSSNIKSASTRKHVTQAIESATQRLRSYRMPPANGLVVFTGHKQIGADQT
                     EMVAFVLEPPEPVASFLYRCDSKFYTAPLHEMLAEKDVYGLVVIDWSEATLGLLRGKR
                     IEVIKNLQSQVPSKHRMGGQSARRFERGHDIAVHEWYKKIGELMTEAYLNLPDLKGII
                     VGGPGYSKEEFATGDYLHHELKKKVLPTFLDTGYTDEYGLRELVEKSREILSGLDLMR
                     EKSLVQRLMEEIRKEDGGLAAY"
BASE COUNT          212 a          404 c          409 g          284 t
ORIGIN      
        1 gtacgccgcc aggccgccgt cctccttgcg gatctcttcc atgagccgtt gcacgaggga
       61 cttctcgcgc atcaggtcga ggccgctcag gatctcccgc gacttctcga cgagctctcg
      121 caggccgtac tcgtccgtgt atccggtgtc gaggaacgtg ggcaggacct ttttcttcaa
      181 ctcgtgatgg agatagtcac cggtcgcgaa ctcttccttc gagtaacccg gaccgccgac
      241 gatgatccct ttcaggtctg gaaggttcag gtacgcctcc gtcatcaact ccccgatctt
      301 cttgtaccac tcgtggaccg cgatatcgtg gccccgctcg aaccgtcggg cgctctgacc
      361 tcccatgcga tgcttcgaag gcacctggga ctggagattc ttgatgacct cgatccgttt
      421 gcctcgcagg aggccgaggg tcgcctcgct ccagtcgatc acgacgaggc cgtagacgtc
      481 cttctccgcg agcatctcgt ggagcggcgc cgtgtagaat ttcgagtcgc accgatagag
      541 gaaggacgcg accggctccg gcggctcgag gacgaacgcg accatttccg tctggtccgc
      601 cccgatttgc ttgtggcccg tgaagacgac gagcccgttg gcgggcggca tccggtacga
      661 ccgcagccgc tgggtcgcgg actcgatcgc ctgcgtcacg tgctttcggg tgcttgcgct
      721 cttgatgttc gacgactgcg acagctcggc ccggagatag ttggtcacgt ccgagatcgg
      781 tcggcccggc gggatgtaga cgctgacgag ttccgtgccg cggcccgcgg cttcttcgat
      841 ctgctcgagg gcgcgccgga acttgtattt gtccatcccg gacatttcgc tcatggttcg
      901 caccacacag ttatttatcg ttcattagga tggcggttcg gataaggtaa tcttttgcga
      961 cgtcagagcc gacggatcaa gaacgactcc tcttgacctc gtcggccgct ggactgtagt
     1021 ccttgaaccc gcgagcggcc ggaagggata tgctccgagg ggtcgatcgg ctccaggatg
     1081 aagggcacgc tgcagcgcag agtcctcggg accttgctgt ctggtgcgct cgggttcatc
     1141 ctgggcctcg tactcacagc agggataggc gaacccatat ggtggctcgt cgcgggcatc
     1201 ctgggtgcag cgttttgcgg gggatatgcg gcactcttcg ggaccccttg gatgcatgaa
     1261 tcatcccgac gcgctgttca gcggctcgag cgcgttcggg gtccaaaaa
//
LOCUS       DATLMA010000448         1054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_884632, whole genome shotgun sequence.
ACCESSION   DATLMA010000448 DATLMA010000000
VERSION     DATLMA010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_884632"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VNA10_05740"
     CDS             complement(<1..779)
                     /locus_tag="VNA10_05740"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG37215.1"
                     /translation="MSYAASVVIPLLRQDDRWLDRALRSALVQSVRCEVIVVPSPHTP
                     PSNVALVEDMRRGAPSRLVVASPPMSGFPRAVNTGFGLARAERFGLLLSDDWLEPTAV
                     QECLEISADVVSTGLWSVAADGSDLPHLSRRLDMESFLKRRTFERRAAYLTHFLLFSR
                     SKVDSIGGLDETLGETPGIDDYDLIWTLLEHGATVGITGRPLYNYRIHGRDRLTLRDR
                     EEQTRTLLRILDKHGVRDPERGHLVERQAVWFGRSEDVVYA"
     gene            complement(763..>1054)
                     /locus_tag="VNA10_05745"
     CDS             complement(763..>1054)
                     /locus_tag="VNA10_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37216.1"
                     /translation="WVLSRREARVRLSPWKRSRRTISMRYWSVTSGRKPEFLSKGFKG
                     RRVFPHTLHYLPKAGPGALRFSGPMCGITLTNGKPPHAWSVVSLIRCRELRG"
BASE COUNT          201 a          337 c          339 g          177 t
ORIGIN      
        1 tcggcgtaca cgacgtcttc ggaacggcca aaccatacgg cctgcctctc gacgagatgg
       61 cccctctcgg ggtccctcac accgtgcttg tcgagaattc gtaagagcgt ccgagtctgc
      121 tcctctcggt ctcgcagggt cagccggtcc ctcccgtgaa tccggtagtt gtacagggga
      181 cgtccggtga tgccgaccgt cgccccgtgc tcgagcagtg tccagatcag atcgtagtcg
      241 tcgatgccgg gcgtctcccc gagggtctcg tccaggccac cgatcgagtc gaccttagat
      301 cgactgaaga gaagaaagtg cgtcaaatag gcagcccttc gctcgaacgt ccgtcgcttc
      361 aggaaactct ccatgtcgag tcgccggcta aggtgaggga gatcggaacc gtctgcggca
      421 acgctccaaa gtccggtcga gacgacgtcg gccgagatct cgagacattc ctggacggcc
      481 gtcggttcga gccagtcgtc agaaagcagg aggccgaacc gttcggcgcg cgccaggcca
      541 aacccggtgt tgacggcacg ggggaatccg ctcatcggtg gcgacgctac cacgagacga
      601 ctcggggcgc cacgtcgcat gtcttcgacg agcgcgacgt tggacggtgg ggtgtgcggc
      661 gaaggcacca cgatcacctc gcaccgcacg ctttgaacga gtgccgagcg gagcgcccga
      721 tcgagccacc gatcgtcttg ccggagcagc ggaatgacga cgctagccgc gtagctcacg
      781 gcatctgatc aaggacacga ccgaccaagc gtgcggcggt ttcccgttgg taagcgtgat
      841 gccacacatc gggccggaga atcgcagcgc tcccggaccc gccttcggaa ggtagtggag
      901 cgtgtgggga aagacacgtc gccccttgaa tcccttgctc aggaactctg gcttccgccc
      961 ggaggtgacg ctccagtagc gcatcgagat cgtccggcgg ctacgcttcc agggtgagag
     1021 acggacacgg gcctcccggc ggctcaagac ccac
//
LOCUS       DATLMA010000449         1370 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_284071, whole genome shotgun sequence.
ACCESSION   DATLMA010000449 DATLMA010000000
VERSION     DATLMA010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284071"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..>1370)
                     /locus_tag="VNA10_05750"
     CDS             complement(237..>1370)
                     /locus_tag="VNA10_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012831401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HVG37217.1"
                     /translation="ARMAFKIVLLAGDGVGPEVMREGVKVLKAVESAYGVSFDLVPFP
                     CGGQHYLETGEEWPDGAFESCKAADAILLGAVGLPQAVLPNGDIAGVGVVFGLRFGLD
                     LYANVRPTKLYPNVRHKIHDGFKLVWEPGKVDFVIVRENTEGLYTPTRGFLDRGGVKE
                     LAVDSRVITRKGAERVIRFAFEVSKERHGAPSDGKHRVTCVDKSNVTAGCKLFRQVYD
                     EVATRYPTVLKDYAYIDAFQQWLIRSPEVYDVAVTSNVFGDIATDLAAVLQGGMGMAA
                     GGNIGDAHAMFEPIHGSAPKHAGKDEVNPTAMILAVQMMLEWLGRRKGERALREAATA
                     VEQAVESTLKKGTILTYDLGGTAKCSEVGTAITSAVARPRKKS"
BASE COUNT          228 a          475 c          415 g          252 t
ORIGIN      
        1 ctccttccgg cgacttacgc ggcgctgctc gtcaagggaa gcctgggact cgaaccggcc
       61 accgcggcca atctggcgct cgacgcgggt ctgctcatcc tctcaacggc catcggcctg
      121 ggcctggcgt ggcggctgta ccagtggcgc gaacgatgac gattccgcat tcaatgccgc
      181 aaggatgacg gaagaatctc gagcggcatt cggataggac gaacccgtcg ctcaggtcat
      241 gacttcttcc gaggtcgagc gaccgcggag gtgatggccg ttccgacctc gctgcacttc
      301 gcggtgccgc cgagatcgta agtgagaatc gtgccctttt tcagcgtgga ctcaacggct
      361 tgttcgacag cggtcgccgc ctcccgcaac gccctctctc ccttccgtcg gccgagccac
      421 tcgagcatca tctggacggc caatatcatg gcggtcgggt tgacttcgtc cttgccggcg
      481 tgtttcggcg cgctcccgtg gatcggttcg aacatcgcgt gcgcgtctcc gatgttcccg
      541 ccggcggcca tgcccatgcc cccctgcagg accgcggcca ggtccgtcgc gatgtcgccg
      601 aacacgttcg acgtgaccgc gacgtcgtag acctccgggg agcgaatgag ccactgctgg
      661 aatgcgtcga tgtatgcgta gtccttcagg acggtcgggt atcgggtggc gacctcgtcg
      721 tacacttggc ggaagagctt gcatccggcc gtgacattcg acttgtcgac gcacgtcacg
      781 cgatgcttcc cgtcggacgg cgcgccatgg cgctccttcg acacctcgaa cgcgaatcgg
      841 atcacccgct cggcgccctt ccgcgtgatg acgcgactgt ccaccgcgag ttccttcact
      901 ccgccccgat cgagaaagcc gcgggtcggc gtgtacaggc cctccgtgtt ctcccgaaca
      961 atcacgaagt ccacttttcc cggttcccac acgagcttga aaccgtcgtg gatcttgtgc
     1021 cggacgttcg gatagagttt cgtcggtcgc acgttcgcgt acaggtccag gccgaaccgc
     1081 aatccgaaca cgacgccgac gccggcaatg tccccgttcg gcaggacggc ctgcgggagc
     1141 ccgacggccc cgaggagaat cgcgtcggcg gccttgcagg attcgaacgc gccgtcgggc
     1201 cactcctccc cggtctcgag gtaatgctga ccaccgcacg gaaacggaac gaggtcgaac
     1261 gagacgccat acgccgactc gaccgccttc aggaccttga cgccttcccg catcacctcc
     1321 ggtccgacgc cgtcccccgc gaggaggaca atcttgaacg ccatccgggc
//
LOCUS       DATLMA010000450         1020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_646531, whole genome shotgun sequence.
ACCESSION   DATLMA010000450 DATLMA010000000
VERSION     DATLMA010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646531"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /locus_tag="VNA10_05755"
     CDS             complement(<1..995)
                     /locus_tag="VNA10_05755"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HVG37218.1"
                     /translation="MRTVRRFPIERPAVAMLGGALMLVLGVLTPTEALLAINLDVIVL
                     LVGMMLLVSGLEICGFFDFVSSRIAVHAKNQATFLAWLMVATAALSAIVLNDTIALLV
                     TPVVVRSTRALRVNPLPYLVAVAIAANVGSVATEVGNPQNAFIAIRSGIPFLTFTAYL
                     LPVTIACLAVAIGLVWFVFRRDLAVPLTPISSVEPVRLQRTGLAVTLGLTVAVAVAFF
                     ASPTPSWLPLVALAGGSFVLFFLPFFAKTTARTLIAKVDWSIILFFVGLFIVLEGVRV
                     SGLSAAIQGGFTASVGGQSGGLAWLVGLSALLSNLMSNVPAVLLLAEVVPHGSTQL"
BASE COUNT          233 a          309 c          356 g          122 t
ORIGIN      
        1 agctgggtcg agccgtgcgg cacgacttcg gctaagagca acaccgcggg cacgttgctc
       61 atcaggttcg agagcagcgc cgatagaccg accagccaag cgaggccgcc ggactggccg
      121 cccaccgaag cggtgaagcc gccctggatt gcagccgaga gtccggagac tcggactccc
      181 tcgaggacga tgaacaggcc gacgaagaag aggatgatgc tccagtccac cttcgcaatc
      241 agggtccgtg cggtcgtctt cgcgaagaat ggcaagaaga acagaacgaa cgatccgccc
      301 gcgagcgcca cgagaggcag ccatgagggc gtcggggagg cgaagaacgc gaccgcgacg
      361 gcgaccgtca ggccgagcgt caccgccagg ccggtccgct ggagccggac gggctcgacg
      421 gaggaaatgg gcgtgagggg aaccgcgagg tctcttcgga acacgaacca gacgaggccg
      481 atcgccacgg cgaggcaggc gatcgtcaca gggagaagat acgcggtgaa ggtgaggaac
      541 ggaatcccgg accggatcgc gatgaacgcg ttctgggggt tgccgacttc ggtggccacg
      601 ctcccgacgt tcgccgcgat cgcgaccgcg acgaggtagg gaagcggatt caccctcaac
      661 gcccgtgtac ttcggaccac gaccggcgtc acgagcagcg cgatcgtgtc gttcaacacg
      721 atggccgaca acgccgccgt cgcaaccatg agccacgcga ggaacgtggc ctggttcttc
      781 gcatggaccg cgattcggga cgagacgaaa tcgaagaatc cgcagatctc gaggccggac
      841 accaggagca tcatgccgac gaggagcacg atcacgtcga ggttgatcgc aaggagcgct
      901 tccgtcggcg tcaggacacc gagaacgagc atgagcgccc cgccgagcat cgcgaccgcg
      961 gggcgctcga tcgggaatcg acggaccgtc cgcaaggaaa tgagaacgta cgtgagaagg
//
LOCUS       DATLMA010000451         3001 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_461902, whole genome shotgun sequence.
ACCESSION   DATLMA010000451 DATLMA010000000
VERSION     DATLMA010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461902"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1008)
                     /locus_tag="VNA10_05760"
     CDS             complement(<1..1008)
                     /locus_tag="VNA10_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37219.1"
                     /translation="MKARIAFLVAFVILATAALVVVSQSMPDPLAKFRTADGRLTIPG
                     HALTPELQRLLFHGNDLQPSTNITFLLPVRSSYPTERLVAVSFASPNLNVFVHPRQAP
                     ETWGSAIDHVLRVWFPPVDWHEVGVGFRDSIRDGVGWFFDLFTMNAKADTLTVDSTTV
                     TIVDPAAVTCTTSQSAAAGDNAVLVMLSNRGPTAYASVTYGSVSLTLIPGTASSGTGF
                     VRTEMWFYQGVIPGGAQTMTATLVSGTAKHVCATVLLGGVWATTPTAGGTTASASSTN
                     PNIAIAPASAGELAFAVLAIRGTTAPTAVTGTGAAATSLYGIAPTQCTAGGTSLCGAG
                     AD"
     gene            complement(1278..2609)
                     /locus_tag="VNA10_05765"
     CDS             complement(1278..2609)
                     /locus_tag="VNA10_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37220.1"
                     /translation="MAAPLKKVARAQLKKIYVLDERGEMAGEYVLDQDCPIDYNDFLK
                     VLPDEGIGDRDSLFVGEYVFTAFQSGKLVFVLLSRGQLAPEDVNWTALLLTAADSHLA
                     PAASRPAPARAAEPKPDADKGIAERDARLQAKEKSLAELEAKLKAEAANLSGRQEELD
                     RQKARLAALADYSTQLQDAVSKGASRSAKTLEIAEQLATSSNEESKKAESKANSDARQ
                     AFEQERKALVAAKTDLETRYREASVRIAQLEKDAKDSIALVEKERAETAVRSAEEEKT
                     RREIESRVADLSQRFTSMAKERLVASHRPPGEVSDEVRKTMEGEKAELARERKFLQRR
                     AIELLDREERVRDREARVDERDREFGRREKDLSAREEDLDRQRTLLAQAKPLAPEIRA
                     EPDEAKKDIERRVKIIQQKALELLDREEKLRRRAAELEAMEARLSGRVTVE"
BASE COUNT          484 a          956 c          964 g          597 t
ORIGIN      
        1 gtccgcgccc gctccgcaga gactggtgcc gccggcggtg cactgggtcg gtgcgattcc
       61 gtagagactc gtcgccgccg cccccgtgcc ggtgacggca gtgggcgcag tggttcctcg
      121 gatcgcgagg accgcgaacg cgagttcgcc cgcggatgcc ggagcgattg caatgttcgg
      181 attcgtgctc gacgcactgg cggtcgttcc tcccgcagtc ggagtcgtag cccagacgcc
      241 gcccaggagg actgtcgcac agacgtgttt cgcggtgccg ctcaccagcg tcgctgtcat
      301 cgtttgagcg ccgcccggga ttacgccttg gtagaaccac atctcagtcc gcacaaatcc
      361 ggtgccgctg gaagcggtcc ccgggattag ggttagactc acggagccgt acgtgacgct
      421 cgcgtatgcg gtgggccctc gattactgag catcacgagc acggcattgt cccccgcggc
      481 cgccgattgc gaggtcgtgc aggttacggc ggcggggtcg acgatcgtga cggtggtcga
      541 atcgaccgtc aatgtgtcgg ccttggcgtt catcgtgaag agatcgaaaa accatccgac
      601 gccgtcccgg atcgagtctc ggaatccgac tcccacctca tgccagtcga ccggagggaa
      661 ccacacgcgg aggacgtgat cgatggcact gccccacgtt tccggcgctt gacgcggatg
      721 aacgaagacg ttgagatttg gagatgcaaa tgagacggcc acgagccgct ccgtcggata
      781 cgaagatcgg accgggagaa ggaaggtgat gttggtggaa ggctgcagat cattcccatg
      841 gaacagcagc cgttgcagct ccggggtcaa cgcatgcccc gggatcgtga ggcgaccatc
      901 ggcagttctg aatttcgcaa gcgggtcggg catcgactgg cttacgacca ccagggcggc
      961 cgttgcaagg atgacgaagg cgacgaggaa cgcgattcgc gccttcacga aaacaccacg
     1021 gcgcggacgg ggacggggac ggaacggccg gacgaagcgg cgctggcgct caccgacgcg
     1081 gcggaaggcc cggggattcc ggttgagtca cctcgtgcga cgtcgtggtt ggaacctggc
     1141 agttctgcac atgagacgtt caaagccgtc acgactctgg cgagcgtctg cgtggcgtta
     1201 cagcgggttc cgttcggacc tatttaagcg ccgtttggtg gttatctgac ctgattcctt
     1261 ctgggaggga aaccagttca ctcgactgtc acccggccgg agagccgggc ttccatcgct
     1321 tcgagctcgg ccgcgcgcct ccggagtttc tcttcccggt ccagcagctc caacgccttc
     1381 tgctggatga tcttcacgcg ccgctcgatg tccttcttcg cttcgtccgg ctcggcgcgg
     1441 atctcgggcg ccagaggttt cgcttgcgcc aagagcgtcc tttgccggtc cagatcctct
     1501 tcgcgggcag agagatcctt ctctcgtcga ccgaattcac ggtctcgttc gtcgacccgt
     1561 gcttcgcggt cccggacccg ctcctcgcgg tccaggagtt cgatcgcccg acgttggagg
     1621 aacttccgct cccgtgcgag ctccgctttc tcgccttcca tcgtcttccg aacttcatca
     1681 gagacctcgc cgggggggcg atgcgaggcg acgagtcgct ctttcgccat cgacgtgaaa
     1741 cgctgactca ggtcggccac tcggctctcg atttcgcggc gggtcttctc ttcttccgct
     1801 gaccgaaccg ccgtttccgc ccgttccttt tcgacaaggg caatcgagtc cttcgcgtcc
     1861 ttctcgagtt gggcgattcg aacggaagcc tcccggtacc gagtctccaa gtcggttttc
     1921 gcggcgacga gcgctttccg ctcctgttcg aatgcttgtc gcgcgtccga attggccttc
     1981 gactcggcct tcttcgattc ctcgttggag ctcgttgcga gctgttctgc gatctccaag
     2041 gtcttcgccg atcgggaggc gcccttcgac actgcatcct gcaattgggt ggaatagtcc
     2101 gcgagggccg caagcctcgc cttctggcgg tccagctcct cctgccgtcc actcaggttc
     2161 gccgcctccg ccttgagctt cgcttcgagc tccgcgaggg acttttcttt cgcttggagc
     2221 cgcgcatcgc gttccgcgat tcccttgtcg gcgtccggtt tcggttcggc cgctcgggcg
     2281 ggggccggac gactcgccgc gggggcgaga tgcgaatccg cggccgtgag gaggagggcg
     2341 gtccagttca catcctcggg cgcgagttgg ccgcgcgaca ggaggacgaa caccaacttg
     2401 ccgctctgga acgcggtgaa gacatattcg ccgacgaaca gggaatcgcg atcgccgatc
     2461 ccttcgtcgg gcaagacctt caggaagtcg ttgtagtcga tcgggcaatc ctggtcgagg
     2521 acgtactctc cggccatctc gccgcgctca tcgaggacgt agatcttctt gagctgcgcc
     2581 cgggcgacct tcttcagcgg agcggccatg aggattccgg agaggacagg gccgaggcct
     2641 cgcagtacga gtccggaaag cagagcttcg atcgcccctt gcatacgctg gccgcctagg
     2701 tcgcgagggc atcgcctcgc ggttcgtgta cggagaaatc gagcggcccg ctccttattt
     2761 aagaaacggg ctttggttat cggttgtgag aaggggagcc gaatgcatcc caggaaccgc
     2821 gtcgtccccg gctctctcca gtgctcacac caaagaccgt gcccgttcca agttgtcgac
     2881 gccgagcgcg acctgggcat gaccgcccac ggtgccgagg tgaatcgcgc tgacgacgtc
     2941 gacgccggcg tctccgagct tccgggcgag ggcggccagc gcgcccggtt tgtcatcaag
     3001 c
//
LOCUS       DATLMA010000452         1092 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_830245, whole genome shotgun sequence.
ACCESSION   DATLMA010000452 DATLMA010000000
VERSION     DATLMA010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830245"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VNA10_05770"
     CDS             <1..547
                     /locus_tag="VNA10_05770"
                     /inference="COORDINATES: protein motif:HMM:NF019585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HVG37221.1"
                     /translation="EARVLRVTKEKGVVKHHVDRMPSADSVHGVIDWDRRYKHMRMHT
                     SQHLMSGLVFRRYAARTVGNQIHMDYSRVDFQPANFTTDDLKRIEDECNEVVASAQDV
                     RIFEEDRVVVQNKIEDRALLDLIPQSVRRLRIIQIGEADYCPCGGTHLKNVSEIGKVH
                     ILEKRSKGKETDRIVYELLSG"
     gene            616..>1092
                     /locus_tag="VNA10_05775"
     CDS             616..>1092
                     /locus_tag="VNA10_05775"
                     /inference="COORDINATES: protein motif:HMM:NF012286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HVG37222.1"
                     /translation="MKAGIVGVGKLGGTIAFALAREGPWDELVLVDAVPDLAWAQAED
                     IRHGLRVSTQPAVGVGTIQDLADCDVVVLSAGQGRKPEMTRLDLLHANAGLVAELSRG
                     IARVATRASLVVLTNPMDVMTTIAWQSTGWPRTRVLGSGTLLDSQRLRVILADHLQV"
BASE COUNT          214 a          334 c          354 g          190 t
ORIGIN      
        1 cgaggctcgg gtccttcggg tcacgaagga gaagggcgtc gtcaagcacc acgttgaccg
       61 aatgccgagt gcggattcgg tacatggcgt cattgactgg gatcggcggt acaagcacat
      121 gcgcatgcac acctcccagc atctgatgtc cggactcgtc ttccggaggt acgctgcgag
      181 gaccgttggc aaccagatcc acatggacta cagtcgcgtg gactttcaac ccgcgaattt
      241 cacgaccgac gatttgaagc gaatcgaaga cgagtgcaac gaagtcgtcg cctcggcgca
      301 agatgtccgg atcttcgaag aggaccgcgt ggttgtccag aacaagatcg aagaccgagc
      361 cctgctcgac ctcatcccgc aatccgttcg gcgcctgcga atcatccaga tcggcgaggc
      421 ggactactgc ccctgcggtg gcacccatct gaaaaacgtc tccgagatcg ggaaggtcca
      481 catcctcgag aagcggtcga aagggaaaga gacggaccgc atcgtgtacg agctcctgtc
      541 ggggtaggcc gtctcgcgac tcggagaccc acgagcgagt gcttatggac tctcaacccc
      601 ttgattgacc gaaccatgaa ggccgggatt gttggcgtcg ggaagctcgg tggcacgatc
      661 gcgttcgccc tcgcgcgaga aggcccgtgg gacgaactcg tcctcgtcga tgcggtgccg
      721 gacctcgcct gggctcaggc cgaggacatc cgccacggct tgcgcgtgtc cacccaaccg
      781 gccgtcgggg tgggcacgat tcaggacctc gcggattgcg atgtcgtcgt cttgtcggcc
      841 ggacaggggc ggaagcccga gatgacccgc ctcgaccttt tgcacgcgaa cgcaggactg
      901 gtggcggaac tgagccgagg catcgcccgg gtggcgacgc gtgccagcct cgtggtgctg
      961 accaacccga tggacgtcat gacgaccatc gcgtggcaat cgaccggatg gccgcggacc
     1021 cgtgtgttgg ggtccggcac actcctcgat tcgcaacggt tgcgggtgat tctggcggac
     1081 cacctccaag tg
//
LOCUS       DATLMA010000453         1023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_223114, whole genome shotgun sequence.
ACCESSION   DATLMA010000453 DATLMA010000000
VERSION     DATLMA010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223114"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VNA10_05780"
     CDS             <1..673
                     /locus_tag="VNA10_05780"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HVG37223.1"
                     /translation="DRVYDTLADESLFRECDDEIAALADSLEPRPYSSREILWDMGRI
                     ASKDPNSLVGTCYRKGIPYFVPALNDSSIGIALAKHHHDRVKKGKEPIALDSIKDNYE
                     IAQVKLKSPRTGVFYVGGGTPKNYISQVEVIQEVMGYPENPHMYAAQITTDVPQWGGL
                     SGCTFEESQSWGKFHKDAKMAQSLVDATIGLPILIGYLLQRGVPKKRKQKRYKWEGEE
                     LVELK"
     gene            complement(683..>1023)
                     /locus_tag="VNA10_05785"
     CDS             complement(683..>1023)
                     /locus_tag="VNA10_05785"
                     /inference="COORDINATES: protein motif:HMM:NF012982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008138 - protein
                     tyrosine/serine/threonine phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dual specificity protein phosphatase family
                     protein"
                     /protein_id="HVG37224.1"
                     /translation="LNTFEIQDAGFEHKKICVEDFAAPTLDQVDDFVAFVDSKIAEGK
                     KVLVHCFAGRGRTGTMLAAYLIHQGMSSEAAVREIRERAGKAYGTLRGVIEPDQEELL
                     RWYERRLSGR"
BASE COUNT          215 a          318 c          317 g          173 t
ORIGIN      
        1 cgatcgcgtg tacgacacgc ttgccgacga gtccctgttc cgcgagtgcg acgacgagat
       61 cgcggccctc gcggattctc tcgaaccgcg gccctacagc agccgcgaga tcctgtggga
      121 catgggccga atcgcctcga aggacccgaa cagcctcgtc gggacgtgct atcgaaaagg
      181 catcccgtac ttcgtcccgg ccctgaacga ttcgtcgatc ggcattgcgc tcgcgaagca
      241 ccaccacgac cgcgtgaaga agggcaagga gccgatcgca ctcgactcga tcaaggacaa
      301 ctacgagatc gcgcaggtca agctgaagtc cccgcggacc ggcgtcttct acgtgggcgg
      361 aggcaccccg aagaattaca tctcgcaggt cgaggtgatc caggaggtca tgggttaccc
      421 ggagaatccg cacatgtacg ccgcgcagat cacgacggac gtcccacaat ggggcggcct
      481 cagcgggtgt acgttcgagg aaagccaatc gtggggcaag ttccacaagg atgcgaagat
      541 ggcccagagc ctcgtcgacg cgacgatcgg tttgccgatc ctgatcgggt atctgttgca
      601 gagaggcgtc ccgaagaagc gaaagcagaa gcgatataag tgggaaggcg aggagctcgt
      661 cgagctcaag tgaggcacgc gctcaccggc cgctgagccg gcgttcgtac cagcgcaaca
      721 gttcctcttg atccggctcg atgacgccgc ggagcgtgcc atatgccttg cccgcgcgct
      781 cacggatttc gcggaccgcg gcctcggacg acattccctg gtggatcagg taggcggcga
      841 gcatcgtccc cgttcggcct cgacctgcaa agcagtggac gagcaccttc ttgccctccg
      901 caatcttcga gtcgacgaag gccacgaaat cgtcgacctg atcgagggtc ggggcggcaa
      961 aatcctcgac gcagatcttc ttgtgctcga agcccgcgtc ctgaatctcg aacgtattca
     1021 atc
//
LOCUS       DATLMA010000454         1151 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_706949, whole genome shotgun sequence.
ACCESSION   DATLMA010000454 DATLMA010000000
VERSION     DATLMA010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706949"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1151
                     /locus_tag="VNA10_05790"
     CDS             <1..>1151
                     /locus_tag="VNA10_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010917205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG37225.1"
                     /translation="MKVREMIELPLKHAELFERLGIDPPKGVLLYGPPGTGKTLIAKA
                     VANEAGANFYSIQGPEIMSKYYGQSEERLREKFEEAQKNAPSVLFIDELDSIAPKREE
                     VTGEVERRVVAQLLTLMDGLSGRGQVIVIGATNRDEAIDPALRRPGRFDREIEIGVPD
                     RSGRKEILQIHTRGMPIEGVEEERDRLLSELADVCHGFVGADLAALAREAAMKTLRRY
                     LPDIDLDKPIPAETLEKMRVLADDFKQALKEIEPSAMREVLVEVPRVNWSDVGGLEDV
                     KMKLREAVEMPLKDPDAFKRMGIRPPRGILLYGPPGSGKTLLAKAVATESEANFISIK
                     GPEVMSKWVGESEKAVRMIFKKAKQVAPCIVFLDELDAIAHVRGFDTDS"
BASE COUNT          230 a          353 c          387 g          181 t
ORIGIN      
        1 tgatgaaggt ccgcgagatg atcgagctcc cgctcaaaca cgcggagttg ttcgagcgcc
       61 tcgggattga tccgccgaaa ggggtcctcc tgtacgggcc gcccggcacc ggcaagacgc
      121 tcatcgcgaa ggcggtggcc aatgaagccg gcgcgaactt ctattccatc cagggcccgg
      181 aaatcatgtc gaaatattac ggtcagagcg aggagcgcct ccgggagaag ttcgaggagg
      241 cccagaagaa tgctccgagc gtcctcttca tcgatgagct cgactcgatc gcccccaagc
      301 gggaagaggt gaccggcgaa gtcgagcgac gggtggtcgc gcaactcctc acgctgatgg
      361 acggcctgtc gggccgcggc caggtcatcg tgatcggcgc gacgaaccga gatgaggcga
      421 tcgatcccgc gttgcgccga cccggtcggt tcgaccgcga gatcgagatc ggcgtcccgg
      481 accggagcgg acggaaggag atccttcaga ttcacacgcg cggcatgccg atcgaaggcg
      541 tcgaggaaga gcgcgaccgg ctcctctccg aactcgcgga tgtgtgccac ggcttcgtcg
      601 gggcggacct cgcggcgctc gcccgcgaag ccgcgatgaa gacgcttcgc cgctatctcc
      661 cggacatcga cctcgacaag ccgattcctg cggagaccct cgagaagatg cgcgtcctgg
      721 ccgacgactt caagcaggct ctgaaggaaa tcgagccgag cgcgatgcgg gaagtcctcg
      781 tcgaggtgcc tcgcgtgaac tggtccgacg tcggcggtct cgaagatgtc aagatgaaac
      841 tgcgcgaggc ggtcgagatg ccgctgaagg acccggacgc gttcaagcgg atgggcatcc
      901 gcccgccgcg tggcatcttg ctgtacggtc cgcccgggtc cgggaagacg cttctcgcga
      961 aggccgtcgc cacggaatcc gaagcgaact tcatctcgat caagggaccc gaggtcatgt
     1021 cgaagtgggt cggagaatcg gaaaaggcgg tccgcatgat cttcaagaag gcgaaacagg
     1081 tcgcgccttg catcgtcttc ctcgacgagc tcgacgcgat tgcgcacgtg cgcggcttcg
     1141 acacggacag c
//
LOCUS       DATLMA010000455         3338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_707192, whole genome shotgun sequence.
ACCESSION   DATLMA010000455 DATLMA010000000
VERSION     DATLMA010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707192"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..917
                     /locus_tag="VNA10_05795"
     CDS             327..917
                     /locus_tag="VNA10_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020721730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HVG37226.1"
                     /translation="MKPTFFTTPQELRTWLEKRHREARELWVGFHKKGTGRASITWPE
                     AVDEALCVGWIDGQRKGIDEVDYAIRFTPRKPGSIWSVANVKRVEELRAQQRMRPAGL
                     EAFDQRAKDRSGIYSYEQREAAELDETQLRKFRENRKAWEFFQAQPPSYRKAAVWWVI
                     TAKTEPTKLKRLGQLIDDSEHGRTVPPLTRRTMKRG"
     gene            1032..2099
                     /locus_tag="VNA10_05800"
     CDS             1032..2099
                     /locus_tag="VNA10_05800"
                     /EC_number="1.1.1.261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008442332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-1-phosphate
                     dehydrogenase"
                     /protein_id="HVG37227.1"
                     /translation="MDTESFSKTKVMELPRNVVVGHDALHTVGEVCQSLKLGKRALIV
                     ADQTTMKIAGLIVEKELAARKIRSSEFLIPDATMEEVREGEEKIRKGNIDFALGVGGG
                     RSIDVAKCASFNAGVPFVSVPTAASHDGVVSSRASIQKDGEKVSLAAQTPIAVIMDTG
                     VIAESPFRLLASGCGDIISNLAAVKDWALARNLRNEYYSSYAAALSELAAHLVIENAS
                     TIKPRLEESAWFVCKALVSSGVAMSIAGSSRPASGSEHKFSHALDRIAKKPGLHGEQC
                     GVGTIMMMYLHAGNWQEVRDALLAIGAPTTARALGVTDDEVVQALVHAHEVNKERYTI
                     LGDEGLTLEAAERLAKITKVV"
     gene            2221..2655
                     /locus_tag="VNA10_05805"
     CDS             2221..2655
                     /locus_tag="VNA10_05805"
                     /inference="COORDINATES: protein motif:HMM:NF015631.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0179 family protein"
                     /protein_id="HVG37228.1"
                     /translation="MVQITLVGERQAHVGHEFVYRGPQPECKPCKVRSACLNQDLGRR
                     YRITRVRDVSHPCLLNEERARVVEVEPIAPDCSLSGRAGVEGAVLAYEKIVCSNGACP
                     NFRLCHPVGVEPGTRIRVLEVGRELECPLGYSLVSAKVSYGN"
     gene            2667..3065
                     /locus_tag="VNA10_05810"
     CDS             2667..3065
                     /locus_tag="VNA10_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37229.1"
                     /translation="MKASLPRRMTLHAIEAAAITLGYRVKREPFDVVAFRALYDGKRF
                     HMRLETHGLERVPKGSEIDLHVDFMRDVTAFHGSRAESEEIAFEMAQLLGALNAQDPE
                     RSRPRVRCPECGKEFGQEAFRAHRKVVHGR"
     gene            complement(3062..>3338)
                     /locus_tag="VNA10_05815"
     CDS             complement(3062..>3338)
                     /locus_tag="VNA10_05815"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG37230.1"
                     /translation="KRAVVGVALAVYSPSAEEGRLLVLNDFFVDPAMRRKGVGRALAT
                     RLLEEAKAMRVERIDLEVTPTNSAAAAFWKSMAFRTAGRTVYGRDIV"
BASE COUNT          634 a         1031 c         1146 g          527 t
ORIGIN      
        1 ttgttccaca ttaccgggtc ctcgtagccg aacgcggccg cgcggtcgta cgaaacgagg
       61 gcgtccgaga attcgcgggc gtcgcagtgt gcgttcccgc gaaggaactc cgcctccccg
      121 cgagtcaggt ccgccttggc gggcagggcc gagatcgcga aggccagggg gagagccatc
      181 ggggcgcatc agagtcgagg tcgatttaat ggttccgcgg tgagtttcgg cggcgttagt
      241 tgcgtacttt cgccgacctc tccaaggacg ggttaatgac cgggagacga tgaggacgac
      301 ccgtcgcggc ggtggttcga ggaccgatga aaccaacctt cttcacaacc ccgcaagagc
      361 tccgaacgtg gcttgagaaa cgacaccgcg aagcccgaga attatgggtc ggattccata
      421 aaaagggcac gggccgggcg agtatcacgt ggccggaagc ggtcgacgaa gcgctgtgcg
      481 ttggatggat tgacggtcag cggaaaggta tcgatgaagt ggattatgcg atccgtttca
      541 caccgcgcaa accgggcagc atctggagcg ttgcgaatgt caaacgcgtc gaggaactcc
      601 gcgcccaaca acgcatgcgc cccgccggcc tcgaggcgtt cgatcaacgc gcgaaagatc
      661 gatcgggaat ctactcatac gagcaacgcg aagcggcgga gcttgacgag acgcaattga
      721 ggaaattccg cgagaatcgg aaggcttggg agttctttca agcgcaacct ccatcgtacc
      781 ggaaggcggc ggtttggtgg gtcatcaccg cgaagacgga gccgacgaaa ctcaaacgcc
      841 tcggacagct tattgacgat tcggagcacg gccgaaccgt gccgccgctg actcgccgca
      901 ccatgaagcg cggctgatct gcgaccgcag gcctctagtt gtcgccgcga tcgggaggcc
      961 gagaacgggg tcgtcggctt taagtagaga gtgttccttg aagcgggttt aggggagacg
     1021 cattgtcgac gatggacacg gagtccttct cgaagacgaa ggtgatggag ctcccccgaa
     1081 acgtcgtcgt cggccatgac gccctgcata cggtcggcga ggtctgccaa tcgctgaagc
     1141 tggggaagcg agccctgatc gtcgcggacc agacgacgat gaagatcgcc ggcctaatcg
     1201 tcgagaagga gctcgcggcg cgcaagattc ggtcctcgga gttcttgatc ccggacgcga
     1261 cgatggaaga ggtccgcgag ggagaagaga agatccgcaa ggggaacatc gacttcgcgc
     1321 tcggcgtcgg cggcgggcgt tcaatcgacg tcgcgaagtg cgcgtccttc aacgcggggg
     1381 tgcctttcgt gagcgttccg accgccgcga gtcacgacgg cgtcgtgtcg tcgcgcgcct
     1441 cgatccagaa ggacggggag aaggtgagcc tcgcggccca gaccccgatc gcggtcataa
     1501 tggacaccgg cgtcatcgcg gagtcgccgt tccggctgct cgcatcggga tgcggggaca
     1561 tcatctcgaa cctcgcggcg gtgaaagact gggccctcgc gcggaacctc cggaacgagt
     1621 actactcgtc gtacgccgcg gcgctgagcg aactcgccgc gcacctcgtg atcgagaacg
     1681 cgtcgacgat caaaccgcgc ctcgaggaaa gcgcgtggtt cgtgtgcaag gcgctcgtgt
     1741 cgagcggggt cgcgatgtcg atcgccggct cctcgcggcc ggcgtcgggg agcgagcaca
     1801 agttctcgca cgccctcgac cggattgcga agaagcccgg gttgcacggg gagcagtgcg
     1861 gcgtcgggac gatcatgatg atgtacctcc acgccgggaa ctggcaggag gtgcgggacg
     1921 cgctcttggc catcggcgcg ccgacgacgg cgcgggccct cggcgtgacg gacgacgagg
     1981 tcgtccaggc cctcgtgcac gcgcacgagg tcaacaagga acgctacaca atcctcggtg
     2041 acgaggggtt gacgctcgaa gcggccgagc gcctcgcgaa gatcacgaag gtcgtctgag
     2101 cggtggtcgt cggcgatcga ggctgcgaat tagccgattc aatcgatcgg tcgccggtgg
     2161 ctccgcggaa cggagaccct taagctaccc cgcgccttag gtccgagaga ggccctcgtc
     2221 gtggtccaga tcacgctcgt cggcgagagg caagcgcacg tgggccacga attcgtctac
     2281 cgcgggccgc agcccgaatg caagccgtgc aaggtccgca gcgcgtgcct caaccaggat
     2341 ctcggccgtc ggtatcggat cacgcgggtc cgagacgtct cgcatccatg cctcctgaac
     2401 gaggaacgcg cccgggtcgt cgaggtcgaa ccgatcgcgc cggactgcag cctctcgggc
     2461 cgggccggag tcgagggggc cgtcctggcg tacgagaaga tcgtgtgttc gaacggcgca
     2521 tgtccgaact tccgtctctg ccatcccgtc ggcgtcgaac cggggacgcg gatccgggtc
     2581 ctcgaggtcg gccgggagct cgaatgcccc ctcggctatt cgctcgtgtc cgcgaaggtc
     2641 tcgtacggca actgaaggca agtccgatga aggcgtccct cccgaggcgg atgaccctcc
     2701 acgcgatcga ggccgcggcc atcaccttgg ggtaccgcgt gaagcgcgag ccgttcgacg
     2761 tcgtcgcgtt ccgcgcgctg tacgacggca aacgattcca catgcgcctg gagacccacg
     2821 ggctcgagcg cgtcccgaag ggatcggaga tcgacctgca cgtcgacttc atgcgagacg
     2881 tgaccgcgtt ccatggatcc agagcggagt cggaggagat tgcgttcgag atggcccagc
     2941 tcctcggcgc cctgaacgcc caggatcccg aacgcagccg cccgcgggtg cgctgccccg
     3001 aatgcgggaa ggagttcgga caggaggcgt tccgcgccca ccggaaggtc gtccacggtc
     3061 gctagacgat gtctcggccg tacacggttc gaccggccgt ccggaaggcc atcgatttcc
     3121 agaacgcggc cgcggccgag ttcgtcgggg tcacctcgag atcaatccgc tcgacgcgca
     3181 tcgccttggc ctcttcgagg agacgcgtcg ccaaggcccg cccgacgccc ttccggcgca
     3241 tcgcgggatc gacgaagaag tcattgagga cgaggagccg accctcctcc gcggacgggg
     3301 aatagaccgc gagggccacg ccgacgaccg cgcgcttc
//
LOCUS       DATLMA010000456         4055 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_223579, whole genome shotgun sequence.
ACCESSION   DATLMA010000456 DATLMA010000000
VERSION     DATLMA010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4055
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223579"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VNA10_05820"
     CDS             <1..306
                     /locus_tag="VNA10_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37231.1"
                     /translation="VYVAAIGSGSIRNRLSASLRDFLADIEERYGDRLQWWSGMNEDL
                     LGIDAMVQLFARRERYRRGDWKRHASPRAGPQPVPNPEERGSEIHVVLVPKEPLRPF"
     gene            complement(311..1444)
                     /locus_tag="VNA10_05825"
     CDS             complement(311..1444)
                     /locus_tag="VNA10_05825"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG37232.1"
                     /translation="MVSAPPAPPPFRVSQRFRYRELLGLVAVQSFGNQMTGSFWIVYL
                     VSRPLDFRVATLLWVIAFLTAALGVLFMARGRPIRARTSMTIGLATMSAGHFAFALLP
                     ASWVVLIGGLAFGIYLPLFWLPMNSLLVRETSPANRAGRLAAVTATFMTVAIVAPVLG
                     GYLADTVGFPFLFALGGLILAANLIRARRLVPPEESFSYVIDLRRMGSRTALAFAGQG
                     GVDGILSVATPLGSFLLTKDSFALGLLFALFSLAAGIAAVLLGRVSDRVRVRSPFLLL
                     GPVLSVPACLLAFASRDLGTFAFAIGWLSMTSVVAPSFIYTILVDRMEDSIPAVTATR
                     ELILNASRTLALFAGLIVLAFGGDVYALYLLVGGVILLEALAK"
     gene            complement(1602..3782)
                     /locus_tag="VNA10_05830"
     CDS             complement(1602..3782)
                     /locus_tag="VNA10_05830"
                     /inference="COORDINATES: protein motif:HMM:NF011071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming)/trehalose-phosphatase"
                     /protein_id="HVG37233.1"
                     /translation="MTLILVSNRLPVTVRRVGNRLDVQANPGGVAAGLASVHRELRGR
                     WFGWPGSIAPGETKEVTARLEKEFDCYPVVLPHNLARPYYSGFSNGTLWPLFHSFSTY
                     ARYSASEWEAYRTVNARFADTVVRALRPDDQLWIHDYHLLLLPRLIRERMPEARIGFF
                     LHIPFPPYDVFRLLPWHKEILQGMLGADLIGFHTYDYARAFLGSLLRDLGLDNRIGTV
                     VAGHRAVQVDVFPLGVDVAKFNSTSIGPAAARSIARLRKGLEPSKLLFSISRLDYTKG
                     IPEALEAFGRFLEVHPEWRRKITYFLAVVPSRERVAEYARLKRTIDERVGRINSRYST
                     IAWSPIRYVYRQLDFDELLALYRVSDVAIVTPLRDGMNLIAKEYVAAKQEPRGVLILS
                     EMAGASKEMLEALIVNPNDVEDVVGAIHRALTMPLDEQAARIRAMQERLRRYDARTWA
                     TRFLERLDDAVRLSQDLAAKDLSDGHRKEIRQAYRKATRRLLLLDYDGTLVSLSRHRD
                     TARPDDRAAGILKGLGADPANHVVLVSGRRRQELEQWFGTFPLTLIAEHGAWVRDRGD
                     PEWRAAIPLEESWKGRFRPVMERFLDRVPGSSLEEKDFSIAWHYRSADVESGTLAAKD
                     LVDILTTLTANFDLQVLPGNKVVEIRRARVNKGSHFALKLSRESWDFILAIGDDWTDE
                     ALFAALPPSAFSIRVGIEASAARLNAEGVSAILDLLEALPATSR"
BASE COUNT          831 a         1262 c         1314 g          648 t
ORIGIN      
        1 gtgtacgtcg ccgcgatcgg atcgggctcc atccgaaatc gtctttcggc gagtctgcgg
       61 gacttcctcg cggacatcga ggaacgatac ggcgaccggc ttcagtggtg gtccgggatg
      121 aacgaagatc tcctcggcat cgatgcgatg gtccaattgt tcgcacggcg cgaacggtat
      181 cgccgcggcg attggaagcg acacgcatcc cctcgagccg gaccgcagcc cgtcccgaac
      241 cccgaggagc gcggttctga aattcacgtg gtcctcgtgc cgaaagagcc gctgcggccc
      301 ttctagcgaa ttacttcgca agcgcctcga gcaggatcac gcctccgacg aggaggtaca
      361 gcgcgtacac gtcgcccccg aacgcgagca cgatgaggcc cgcgaaaagg gcgagcgtcc
      421 ggctcgcgtt caggatgagc tcgcgggtcg ccgtgaccgc cgggatcgag tcctccatgc
      481 gatcgaccag gatcgtgtag atgaaggatg gagcgacgac cgaggtcatc gatagccagc
      541 cgatggcgaa cgcgaaggtg cccagatcgc gagacgcgaa ggcgagcagg caggcgggca
      601 ccgacaggac cggtcccagg aggagaaagg gactccggac tcgcactcga tccgagacgc
      661 ggccgagcag cactgcggcg atgcctgccg caagggagaa gagcgcgaac agcaggccga
      721 gggcgaacga atccttcgtg aggagaaaag agccgagcgg cgtggcgacg gagaggatgc
      781 cgtcgacccc tccctgtccc gcgaatgcga gggccgtgcg ggagcccatc cgccgcaagt
      841 cgatcacgta ggaaaaggac tcctcgggcg ggacgagcct acgcgcacgg atcaggttgg
      901 ccgcgaggat aagcccgccg agagcaaaga ggaacggaaa accgacggtg tctgcgagat
      961 agcctccaag gaccggcgcg acgatggcga ccgtcatgaa ggtcgcggtg acggccgcca
     1021 gccgacccgc gcggttcgcc ggactggtct ctctcacgag cagggaattc atggggagcc
     1081 agaacaacgg caagtaaatt ccgaacgcga gtcctccaat gaggacgacc cagctcgccg
     1141 gcaacaatgc aaacgcgaag tgacccgcgg acatcgtcgc aaggccaatc gtcatgctcg
     1201 tcctcgctcg aattggtcgg ccgcgagcca tgaagaggac gccaagcgcg gcggtaagga
     1261 aggcgatgac ccacaggagg gtagcgaccc ggaagtcaag cggccggctc acgaggtaga
     1321 caatccagaa actcccggtc atctggtttc cgaacgactg gaccgccacg agccccagca
     1381 actcgcgata ccgaaagcgc tgcgagacgc gaaacggggg tggggccggc ggggcggata
     1441 ccatccgggc cgcaccgacg cacgcccctg tacaaagaga cttcgtttcg agttccgcgt
     1501 gtcaatccac agcgcggatc gcggccatcg gaggccaagt acaatgctac cgagaggctc
     1561 cgatcgctct tcagccacgc tctggtctcg ccggaaccga gtcagcgact tgtcgcagga
     1621 agggcttcga gcaaatcgag aattgctgac acgccctccg cgttgagccg ggctgcggac
     1681 gcctcgatcc caacccggat ggaaaacgca ctcggaggga gcgcagcgaa cagcgcctcg
     1741 tcggtccaat cgtcgccaat cgcgaggatg aagtcccacg attctcgtga gagtttcagc
     1801 gcaaagtggc tgcccttgtt cactcgcgcg cggcgaatct cgacgacctt gttccccggc
     1861 aagacctgaa ggtcgaagtt cgcggtcagc gtggtcagga tgtcgacgag gtccttggcc
     1921 gcaagggtcc cggattccac atccgccgag cgatagtgcc acgcgatcga gaagtctttc
     1981 tcttcgagtg aagacccggg gacacgatcg aggaaccgtt ccatgacggg ccgaaaccgg
     2041 cccttccagc tctcctcgag cggaatcgcg gccctccact ccgggtcccc gcgatcgcgg
     2101 acccacgcac catgttctgc gatgagcgtc agaggaaagg tcccgaacca ttgctccaat
     2161 tcttgtcgcc gtcgaccgct cacgagcacg acgtggttcg cgggatccgc gccaagtcct
     2221 ttcaggattc ccgcagcgcg gtcgtccggg cgtgccgtgt cccgatgacg cgagagggac
     2281 acgagcgttc cgtcatagtc gaggagcagc agtcgtcggg ttgccttccg gtacgcttgc
     2341 cggatctcct tccgatgccc gtccgaaagg tccttcgccg cgagatcctg ggacagccgg
     2401 acggcgtcgt ccaggcgctc gaggaaccgc gtcgcccagg tgcgagcgtc gtagcggcgg
     2461 agccgctcct gcatcgcacg gattcgcgcg gcttgttcgt ccaacggcat cgtgagcgct
     2521 cggtggatcg cgccgacgac atcctcgacg tcgttcgggt tcacgatgag ggcctcaagc
     2581 atctccttcg atgccccggc catctcgctc aggatgagca ccccacgcgg ttcttgcttc
     2641 gcggcgacat actctttcgc gatgaggttc atcccatccc gtaggggagt gacgatcgcc
     2701 acatcgctca cccggtagag cgcaaggagc tcgtcgaagt ccagctggcg gtacacgtat
     2761 cggatgggcg accacgcgat cgtgctgtac cggctgttga tgcgccccac gcgctcgtca
     2821 atcgtccgct tcaaccgtgc atactcggcc actcgctcgc gggagggcac gaccgcgagg
     2881 aagtaggtaa ttttccgacg ccactccggg tgcacttcga ggaatcggcc gaacgcttcg
     2941 agcgcctccg ggatgccctt cgtatagtcg aggcgggaaa tcgagaagag cagcttcgag
     3001 ggctccagcc ctttcctcaa tcgtgcgatc gaacgcgcgg cggcgggacc gatcgacgtc
     3061 gaattgaact tcgcgacgtc gaccccgagc gggaacacat cgacttgaac cgctcggtgg
     3121 cccgcgacga cggtgccgat ccggttgtcg aggcccaggt cgcggaggag gcttccgagg
     3181 aacgcacgcg cataatcgta ggtgtgaaag ccgatcagat cggcaccgag catgccttgg
     3241 aggatttcct tgtgccacgg gaggagacgg aacacatcgt atggtgggaa tgggatgtgg
     3301 aggaagaatc cgatccgcgc ttcgggcatc cgctctcgaa tcaatcgggg caggaggagg
     3361 agatgatagt catggatcca gagctgatcg tccgggcgga gagcacgcac caccgtgtcc
     3421 gcgaacctcg cgttgacggt gcgatacgcc tcccattcgg aggccgaata cctcgcgtac
     3481 gtcgagaagg agtgaaacaa cggccacaat gtcccattcg aaaagccact gtagtaaggg
     3541 cgggccagat tgtgaggcag gacgacagga tagcaatcga actccttttc caagcgagcg
     3601 gtgacctcct tggtttcgcc cggggcgatc gagccgggcc atccgaacca gcgacctcgc
     3661 aactctcgat gaacggatgc gaggcccgcc gcgaccccgc cgggattcgc ctgaacgtcg
     3721 aggcggttcc cgacgcgccg aacggtgacc ggcagacggt tcgagaccag gataagagtc
     3781 atgtccgcag cgagcccctc atgcacccaa tggccgcgta atcgtggtgg atggcacgag
     3841 tcgatctgat ccggggatac gggcttgtcc ggagccggga gtacatcgcg cgttataatg
     3901 gtgtctcgcg acggccttcc cgatcactca gtcgagcacc aagctgacaa tgaagacagg
     3961 tggtttccgc agctcaaacc ggtagcgcag tcgaatcccc gaaagcgttt atacgttgtc
     4021 ccttgatagg cgccggctgc ggggatcgcc tagcc
//
LOCUS       DATLMA010000457         1055 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_525097, whole genome shotgun sequence.
ACCESSION   DATLMA010000457 DATLMA010000000
VERSION     DATLMA010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525097"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1002)
                     /locus_tag="VNA10_05835"
     CDS             complement(<1..1002)
                     /locus_tag="VNA10_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007917168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HVG37234.1"
                     /translation="MIPTSLNASALRDPDGRAIGVVGILRDMRELDKARAYAESLIKN
                     APDPVFVSDLEGKILQANDAVFALLGFRPDELIEQSLSRIISTVETREFLAALREVVE
                     RGVTRNARLNPRSASGEVIPTTLNASALRDADGKVIGGIGILRDMRELDKARAYAESL
                     IKNAPDPVFVSDLEGKILQANDAVSALLGFRPDELLEQSLSRFISPEETREFTAALRE
                     VVERGVTRNARLNPRSASGEVIPTTLNASALRNPDGKVIGAIGILRDMRELDKARAYA
                     ESLIKNAPDPVFVSDLEGKILQANDAVFALLGFRPDELIEQSLSRIISSEETRGFLAA
                     "
BASE COUNT          184 a          340 c          344 g          187 t
ORIGIN      
        1 agcggccagg aacccgcgcg tctcctcgga ggaaatgatg cgtgagagcg actgttcgat
       61 cagctcgtcc ggacggaatc cgaggagggc gaacacggca tcgttggctt gaaggatctt
      121 tccctcgaga tcggagacga ataccgggtc gggcgcgttc ttgatcaagc tctccgcgta
      181 ggcccgagcc ttgtccaact cccgcatgtc gcgcaggatg ccgatggcac cgatcacctt
      241 gccgtcaggg ttgcgaagcg ccgaggcgtt cagggtcgtc gggatgacct ccccgctcgc
      301 gctccgcggg ttgagccggg cgttgcgagt gacaccgcgc tcgacaacct ctcgcagcgc
      361 cgcggtgaac tcccgtgtct cctcggggct gatgaaacgc gagagcgact gctcgaggag
      421 ctcgtcagga cggaagccga ggagtgcaga cacggcgtcg ttggcctgca agatctttcc
      481 ttcgaggtcg gagacaaaca ccgggtccgg cgcgttcttg atcaaactct cggcgtaggc
      541 gcgggccttg tccagttccc gcatgtcgcg caggatcccg atcccgccaa tcaccttgcc
      601 gtcggcgtcg cgcagcgccg aggcgttgag ggtcgtgggg atcacctccc cgctcgcgct
      661 gcgcgggttg agccgggcgt tgcgggtgac gccccgctcc acgacctccc ggagggcggc
      721 caagaactcc cgagtttcaa cggtcgaaat aatgcgcgac agtgactgct cgatcagctc
      781 gtctggacgg aagccaagga gcgcgaagac ggcatcgttg gcctgcagga tctttccctc
      841 aaggtcggaa acgaacaccg ggtccggcgc attcttgatc aagctctcgg cgtacgcgcg
      901 ggccttgtcc agttcccgca tgtcacgcag gatgccaacc acgccgatcg ctcgaccgtc
      961 gggatcgcgc agcgcagaag cgttcaggct cgtggggatc acctcgccgc tcgcactacg
     1021 agggtttagg accacgttcc gcatgacacc ccgtt
//
LOCUS       DATLMA010000458         1029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_410107, whole genome shotgun sequence.
ACCESSION   DATLMA010000458 DATLMA010000000
VERSION     DATLMA010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410107"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VNA10_05840"
     CDS             <1..299
                     /locus_tag="VNA10_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013898692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HVG37235.1"
                     /translation="VVAGTGMQFFFDQTRPTLGLSVLDGVTKVSARGTRAHIAAGLDL
                     AAALREAASEVSGNGGGHNIASGATIPKGKEDRFLSRVDEIVGRQLEGPPAKDQ"
     gene            complement(293..880)
                     /locus_tag="VNA10_05845"
     CDS             complement(293..880)
                     /locus_tag="VNA10_05845"
                     /inference="COORDINATES: protein motif:HMM:NF017570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF835 domain-containing protein"
                     /protein_id="HVG37236.1"
                     /translation="MGWVQPQEGEMGTEAEALRSAMPMELEKGVCYLVKEKKPELSFR
                     LFEMLLAQKIPSLCITRQYPDRVRRERGLTDVRIIWLSHTPGEDYHNPTAIGTLAKVI
                     QKFIEDNNGEGAVLLDGLEYLIINNGFLQTLMFVEHVNEFVMQRRAIIILPVSPDTLE
                     EKELALLERNMKVLESPALKTDLESREVSRLLDNY"
BASE COUNT          185 a          314 c          314 g          216 t
ORIGIN      
        1 gcgtggtcgc ggggaccggg atgcaattct tcttcgatca aacgaggcca acgctcgggc
       61 tctccgttct cgacggcgtc acgaaggtct ccgcgcgcgg cacccgcgcg cacatcgcgg
      121 cgggattgga cctcgccgcc gctctccgag aggccgcgtc ggaggtctcg gggaacggcg
      181 gaggccacaa catcgcctcc ggtgcgacga tcccgaaggg caaggaagac cggttcctga
      241 gccgcgtcga cgaaatcgtc ggacgccaac ttgaaggccc accggcgaag gatcaataat
      301 tgtccaagag gcgactcact tcacgcgatt cgaggtccgt cttgagagcc ggggactcga
      361 ggaccttcat gttccgttcg aggagggcga gctctttctc ctcgagggtg tccgggctca
      421 ccggcaggat gataatcgcg cgccgttgca tcacgaactc gttcacgtgc tcgacgaaca
      481 tcagcgtctg gaggaacccg ttgttgatga tcaagtactc caggccatcg aggaggaccg
      541 cgccttcgcc gttgttgtcc tcgatgaact tctggatcac cttcgcgagc gtgccgatcg
      601 cggtcgggtt gtggtagtcc tcgcccggcg tgtggctcag ccaaatgatt cgcacgtccg
      661 tcaggccgcg ttcgcggcgc acgcgatccg ggtattggcg ggtgatgcag aggctcggga
      721 tcttctgagc gagtagcatt tcgaagaggc ggaaactgag ctcgggcttc ttctctttca
      781 cgagatagca gacgcccttc tcgagttcca tgggcatcgc ggagcgtaga gcttcagcct
      841 ccgtgcccat ttcgccttcc tgaggttgca cccatcccat cggtttctcc atagcgatta
      901 tcgtctcttc aaacttcgtt ccagattatc actgagtact ttggccggaa tttcggggat
      961 ggaaatcaac gtcgtcttgc cgacgacgcc ctcgccgctc aacttcgtat cgacgaggcc
     1021 gagcgcatc
//
LOCUS       DATLMA010000459         1889 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_410225, whole genome shotgun sequence.
ACCESSION   DATLMA010000459 DATLMA010000000
VERSION     DATLMA010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410225"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VNA10_05850"
     CDS             complement(<1..582)
                     /locus_tag="VNA10_05850"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HVG37237.1"
                     /translation="MTSETIEKGDIVWIEYDAWTVNPNGTLTLFDTTHDDVAKKEGKF
                     DEKKVYMEVPAVIGRGRLFEGLEAGLVGAKVGETIEVLIPPEKGAGVRDPRLVELRTE
                     REFLRQEISPEVGLEVSITGKRGVVTAVSAGRVRVDFNNPLAGKMLKYVVKASRKAKT
                     PEERVRAIIDMDYGLADQFKIDLKGGSAEIHLPD"
     gene            complement(720..1667)
                     /locus_tag="VNA10_05855"
     CDS             complement(720..1667)
                     /locus_tag="VNA10_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015503939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription initiation factor IIB"
                     /protein_id="HVG37238.1"
                     /translation="MLFFCRGRTDCVREVEITTQCPECHGDHLVRDYSRAEIVCEDCG
                     LVLDDMIIDEGPEWRAFDSEQRESRERAGPPSTIMAHDKGLSTSIGWRNKDAYGRQIP
                     HKSRAQIYRLRKWQHRIRTSKSGERSLAQGLTEINTMASKMGLPRHVRENAAVLYRRA
                     STKNLVRGRSIDEVVAATLYASCRQSGVPRTLDEIASKSSVDRKSIGRTYRTLVRELG
                     LKLLPQSPRDYIARFCNRLELDMDVQRKAKEILDKVEKDELASGVAPSGVAAATIYIS
                     AILCNKPCTQKEVAEVAGVTEVTIRNRYKRISVAIGMVK"
BASE COUNT          300 a          613 c          575 g          401 t
ORIGIN      
        1 gtccgggaga tggatttccg cgctgccgcc cttcagatcg atcttgaact gatccgcgag
       61 gccgtaatcc atgtcgatga tcgcgcggac gcgttcctcg ggcgtctttg ccttgcgcga
      121 cgctttgacg acgtacttca acatcttgcc cgcgagcggg ttgttgaagt cgacccggac
      181 gcgaccggcg ctgaccgcgg tgaccacgcc gcgcttcccg gtgatcgata cttcgagtcc
      241 gacctcgggg ctgatctctt gccgcaggaa ctcccgctcc gtgcggagct cgacgaggcg
      301 cgggtctcgc actcccgccc ccttttctgg agggatgagg acttcgatcg tttccccgac
      361 cttcgccccg accaggccgg cctcgaggcc ttcgaagagc cgccctcggc cgatgactgc
      421 cgggacctcc atgtacactt tcttctcgtc gaacttgccc tccttcttcg cgacgtcatc
      481 gtgggtcgtg tcgaagaggg tcaaggtccc gttcgggttc accgtccagg cgtcgtactc
      541 aatccagacg atgtcccctt tctcgatcgt ttcggaggtc acgcgcctca cggaaaggat
      601 gcttgtcctt aaagtttgtc gagtcgcccg attggtttct acggcatggt ctggttctcc
      661 cccggacgcc gagtccccag ggccgcgcaa cgagagccgc aaggatgttg aaggatttcc
      721 tacttgacca tgccgatcgc gacggagatc cgcttgtacc gatttcgaat cgtgacttcc
      781 gtcacgcccg cgacctcggc gacttccttc tgcgtacacg gcttgttgca aaggattgca
      841 gagatgtaaa tcgtcgcggc cgccacgcca ctcggcgcca caccggaagc gagttcgtcc
      901 ttctcgacct tgtcgaggat ctccttcgct ttccgctgaa cgtccatgtc cagctcgagg
      961 cggttgcaga accgggcgat gtaatcccga ggactctgcg gcagaagttt gagcccgagt
     1021 tcgcggacga gggttcgata cgtccgtccg atcgacttcc ggtccacgct cgacttcgat
     1081 gcgatttcgt cgagggttcg cggcacgccg gactggcggc acgaggcata cagggtcgcg
     1141 gcgacgacct cgtcgatcga ccgtccccgg acaaggttct tggtcgacgc ccgtcggtac
     1201 aggaccgcgg cgttctcgcg cacgtggcgc ggcaaaccca tcttcgaggc catcgtgttg
     1261 atttccgtga gaccctgggc gagggagcgc tccccgctct tcgacgtccg gatgcggtgc
     1321 tgccacttcc ggagtcggta gatctgggcc cgcgacttgt ggggaatctg ccggccatag
     1381 gcgtccttgt tccgccatcc gatggaagtc gagaggccct tgtcgtgggc catgatcgtg
     1441 ctcggcggcc cggcccgctc ccgcgactcc cgttgctccg agtcgaaggc ccgccactcc
     1501 ggaccttcgt cgatgatcat gtcgtcgagg acgaggccac agtcctcgca gacgatctcc
     1561 gcgcgggaat agtcccgcac gaggtggtca ccgtggcatt ctgggcactg ggttgtgatc
     1621 tctacctctc gcacgcaatc cgtcctcccc cgacagaaga ataacatcct tacgaaacag
     1681 gaattattta acccttcgtc ctaacgccgc gtcgttttcc atgcgaaatc gcgcgcgttt
     1741 gtctcgagcg ggcgtcctag tctgtcgggt ctcgaggaac ccttggccgg gaggcgtcag
     1801 ggccggagtt cgacgaattc gccgttccgg agcatgcgcc agcggccggg gagcgttggg
     1861 aggacttcgg agcagacgaa gcgggcgtc
//
LOCUS       DATLMA010000460         3287 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_166596, whole genome shotgun sequence.
ACCESSION   DATLMA010000460 DATLMA010000000
VERSION     DATLMA010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166596"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VNA10_05860"
     CDS             <1..504
                     /locus_tag="VNA10_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015922602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HVG37239.1"
                     /translation="ARMKGVGKFGEVMAGEKGKISYDELAARLEKIIHSGSQRKPITD
                     FVCRELRKIPHYTWVGIYNVDGSELVLASWSGPSATLHLRIPLGQGICSAAVAEKGTV
                     IVPDVNDDPRYLQCFINTRAEMVVPILRDGAAIAEIDIDSDQLNAFTPTDQEFVEWVA
                     QELVRIL"
     gene            complement(511..1059)
                     /locus_tag="VNA10_05865"
     CDS             complement(511..1059)
                     /locus_tag="VNA10_05865"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37240.1"
                     /translation="MDREILAVKTRKDLYDFVRKNPGFHLRELSRALNLSITLADYHL
                     RFLEKHELITSAMDGEYKRFYPRSTPGQAEARPALSDAEKQILAFLRQPVPLKVIDFL
                     MEREAATHKEILEQVPVSPSTLSHHLKKMQGAGIIAHAEPTERGYRVVDPKAIARLMT
                     AYELATPDQVDTFIRVWGEFRL"
     gene            complement(1076..1342)
                     /locus_tag="VNA10_05870"
     CDS             complement(1076..1342)
                     /locus_tag="VNA10_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37241.1"
                     /translation="MVAIENVLLAAESVFALVLTVIAVLALRRAKDVQLAFLAAAFGV
                     FFLKALLLTISLFALSLTSGQVFLLSGSLDLVILALFYGFTLRR"
     gene            complement(1391..2464)
                     /locus_tag="VNA10_05875"
     CDS             complement(1391..2464)
                     /locus_tag="VNA10_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37242.1"
                     /translation="MLRSRQVVLAAAAAGAAALLIGSTLAVLTLRPALIDADGDGVPD
                     SVEAATQRTVVAATAGDTFTIVSRLASAPYQDQFEVSYAAGTFIVTYDRARGSDSSYQ
                     LEFRNLVEWVDANRNNRIDPGETVGVGTTLGTSAFANAPVTKTQVDSADGGHVTELSI
                     RSTTANMTLNVTVAERFMRLSSTRVLTPMEVKLDLTIDRATLTPGSGLGLDVRINTTK
                     QLEFNNRSWDDVNEFAEGEAGLNVTGGPSTSPATVFFSWSKTAIADGREIPVTYTNVS
                     TGDPNSYELYLAYPIGATGSPVKLVHDPVLGVDSAAYKGVVTRTPELQGDLVLYAASL
                     AAAVFLIALTLMIADRRRKKREE"
     gene            complement(2594..2851)
                     /locus_tag="VNA10_05880"
     CDS             complement(2594..2851)
                     /locus_tag="VNA10_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011973549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HVG37243.1"
                     /translation="MAVAEGRRMESRMSYSGAGFRPSNVPVEEGKVYEAKIEDIGREG
                     DGLARIANFVVFVPGTKIGDAVKIRITKVHRRMAFGEVVRE"
     gene            complement(2915..>3287)
                     /locus_tag="VNA10_05885"
     CDS             complement(2915..>3287)
                     /locus_tag="VNA10_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37244.1"
                     /translation="CGELFETEAPTGASVASPAPTASDDDEERSERKTGFREKFLFYA
                     GIFLILLGGPGIALGSWLHDELRIGVGEFTAFDAFGPWNRLVTAIGLIVLIVGIVCLI
                     LSLRFSRPSDVEKDLNALRQS"
BASE COUNT          610 a         1026 c         1057 g          594 t
ORIGIN      
        1 gctcgaatga agggagtcgg gaagttcggc gaagtcatgg ccggcgagaa aggcaagatc
       61 agttacgacg aactcgccgc tcgcctcgag aagatcatcc actccggaag ccagcgcaag
      121 ccgatcaccg atttcgtgtg ccgggagctg cggaagatcc cgcactacac ctgggtcggc
      181 atctacaacg tcgacggatc ggaactcgtc ctcgcctctt ggtccggccc gagcgcgacc
      241 cttcacctgc ggattcccct gggccaaggc atctgctcgg ccgccgttgc ggagaagggt
      301 accgtcatcg tgccggacgt gaacgacgat ccacggtacc ttcagtgttt catcaacacc
      361 cgggcggaga tggtcgtgcc gatcctccga gacggcgccg cgatcgcgga gatcgacatc
      421 gactcggacc agctcaatgc attcaccccg acggaccaag agttcgtcga gtgggtcgcg
      481 caggaactcg tccggatcct ctgagatcga tcagagccgg aactcgcccc agacgcgaat
      541 gaacgtgtcg acttggtccg gtgtcgccaa ctcataggcg gtcatgaggc gcgcgatggc
      601 cttgggatcg acgacgcggt atccgcgctc ggtcggctcg gcgtgggcga tgatccccgc
      661 cccctgcatt ttcttcagat gatgggagag cgtcgacggc gagacgggta cctgctccag
      721 gatttctttg tgggtcgccg cctcccgttc catgaggaag tcgatcacct tcagcggcac
      781 cggttgacgc aagaaggcga ggatctgctt ctccgcgtcg ctgagggcgg gccgcgcttc
      841 cgcttgaccg ggcgtcgatc gcggatagaa ccgcttgtat tcgccgtcca tcgcggacgt
      901 gatcagctcg tgcttctcga ggaaccgcag gtggtaatcc gcgagggtga tcgaaaggtt
      961 cagcgctcgc gatagttcac gaagatggaa acccggattc ttgcggacga agtcatagag
     1021 gtccttccgg gtcttgacgg ccaggatctc ccggtccatg aagaccacgc ggcgctcagc
     1081 gccgcagagt gaacccgtag aatagggcga ggatcacgag gtcgagggac ccggacaaca
     1141 agaacacttg accggaggtg agcgagagcg cgaacaacga gatcgtcaag agaagggcct
     1201 tcaggaaaaa cacgccgaag gccgccgcca ggaaggcaag ctgcacatcc ttcgccctcc
     1261 ggagggcgag gaccgcgatg accgtcagca cgagggcgaa gaccgattcg gccgcgagca
     1321 ggacgttctc gatggccacc atggggaccg ccgcggaccg taaaggaccc gggtgttaag
     1381 gtttccggcc ttattcctcg cgtttcttgc ggcggcggtc tgcgatcatc aacgtcaggg
     1441 cgatgaggaa cacggctgcc gcgagggacg cggcgtagag tacgaggtct ccctgaagct
     1501 ctggcgtacg ggtcacgacg cctttgtacg cggcgctgtc gacgccaagg accggatcat
     1561 gaacgagctt caccggcgaa ccggtcgcgc cgatcgggta tgccagatag agctcgtagg
     1621 aattcggatc gccggtcgag acgttcgtgt aggtcaccgg gatctcgcgg ccgtcggcga
     1681 tggccgtctt ggaccaggag aagaacacgg tggccgggct cgtggacgga cctccggtca
     1741 cgttgaggcc ggcctcgcct tctgcgaact cattcacgtc gtcccagctg cggttgttga
     1801 actcgagttg cttcgtcgtg ttgatgcgca cgtcgaggcc cagcccggat cccggcgtga
     1861 gggtcgcccg atcgatggtc aggtcgagtt tgacttccat gggcgtcagg accctcgtgc
     1921 tggaaaggcg catgaaccgc tcggccacgg tgacgttcaa ggtcatgttg gccgtcgtgc
     1981 tgcggatgga caactccgtc acgtgcccgc cgtccgcgct gtccacctga gtcttcgtca
     2041 cgggggcgtt ggcgaacgcg ctggtcccca acgtcgttcc cacaccgacg gtctcgcccg
     2101 gatcgatccg attgttccgg ttggcatcca cccactcgac gaggttccgg aattcgagtt
     2161 gatatgaact gtcgctgccg cgagcccggt catacgtgac gatgaaggtc ccggccgcgt
     2221 aggacacctc gaactggtcc tggtatgggg cgctcgcaag ccggctcacg atcgtgaatg
     2281 tatctccggc cgtcgcggcg accacggttc gctgggtggc ggcctcgacc gagtccggaa
     2341 cgccgtctcc gtccgcatcg atcagggcgg gccggagcgt caggaccgcg agggtggatc
     2401 cgatcaagag cgcggcggcg ccggcggcgg cggccgcgag gacaacctgc cgtgagcgca
     2461 gcacagaacc gtcctggcga gtcgatgggg tgcggcgcat ataaggaact tattctacgg
     2521 ttttcgaagc tcgaagacgg ggtctccggc ttccgctcgc gctctccctg actccccccg
     2581 catcggcgcg acgtcactcg cggacgactt ctccgaacgc catgcgccgg tggaccttcg
     2641 tgatgcggat cttgaccgcg tccccgatct tcgtccctgg gacgaagacc acgaagttcg
     2701 cgatccgcgc gagtccgtcg ccttcccgac cgatatcttc aatcttggct tcgtacacct
     2761 tcccttcctc caccgggacg ttcgaaggtc ggaagccagc ccccgaatac gacatccgcg
     2821 actccatgcg gcggccctct gccaccgcca cgtttcgcat ccgctgcacg gtatataatg
     2881 atataggggt aggcccgaaa gagggggctt gacctcacga ttgtcgcagc gcgttcaggt
     2941 ctttctcgac atcggatggc cgggagaatc gcaggctcag gatcagacac acgatcccga
     3001 cgatcaacac gatgagtccg atcgcggtca cgagccggtt ccacggacca aaggcatcga
     3061 aggctgtgaa ttccccgacg ccgatccgga gctcgtcatg gagccacgat cccaatgcga
     3121 ttccgggacc gccaaggagg atcaggaaga tgcctgcgta gaagaggaac ttctcgcgga
     3181 acccggtttt ccgctcgctc cgttcttcgt catcgtcgga tgccgtgggg gcgggcgatg
     3241 cgacggacgc ccccgttggg gcttcggtct caaacagttc cccgcac
//
LOCUS       DATLMA010000461         4443 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_285620, whole genome shotgun sequence.
ACCESSION   DATLMA010000461 DATLMA010000000
VERSION     DATLMA010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 4443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4443
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285620"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1451)
                     /locus_tag="VNA10_05890"
     CDS             complement(<1..1451)
                     /locus_tag="VNA10_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37245.1"
                     /translation="MSWLLRLMLKEEFRVHASYSGQTMFVSFPFIITMFSLSIAVTSG
                     RLFAYTPLPDAILLLHVSVFLYGLSVGAFGFLGRQYLERTTGTRNYLVAMPGILPMRF
                     RRTFLGMFVRDAIFYMVLLLVPATVGLAMSIPVTHFRLTSIGVLFGAALLSFLLGMSL
                     SFFVSTVYMRSRVGFVLAAAGVSALFAAAGAARVIPFSWILPSLAAHELLPPLGANAG
                     GAAALLLLGLGIAAALIAGAVGLVPERFEPPSVAARNELPGIIARLDRFEGYSALLGK
                     EFLDFQRSGTYAKMFFSFVTPLLLLSFTAWFVRYGLQVPVGFNTVFYAGMVGFFGVIL
                     YNWMNNVDATDYLSTVPISVPQVIRTKLIAFLLMTTWIGVGFVVVIAWLNADTRLLWL
                     AIPIVLVTSLYIVVMTAYLTGLRTNSFLFDPGVLARFSVMSMLPDFGLTILSFTIDRD
                     LRLSAIGIGLVLAILGAITYILLKGIDAKWRGT"
     gene            complement(1454..2164)
                     /locus_tag="VNA10_05895"
     CDS             complement(1454..2164)
                     /locus_tag="VNA10_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014406242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37246.1"
                     /translation="MPAIQASQLTKRYGTVDALKGIDLVVEPGEFFGLFGPNGAGKTT
                     MLRILTGQLRPTTGDARVLNIDVVQEPLQVKSLVGIVPEVESPPSYLTAHEYLYFVGR
                     VRKLDRLEERIAHWFEFFDLDEGGTTLCKDLSKGTRQKLMLAAAFIHGPALVFLDEPF
                     INLDPIYQRKLKQFLTEYIAGGGTAFMASHLLDIASKLCHRVGVIRSGSIIATGTVDQ
                     IRADDADLESAFLRLVGA"
     gene            2262..2690
                     /locus_tag="VNA10_05900"
     CDS             2262..2690
                     /locus_tag="VNA10_05900"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HVG37247.1"
                     /translation="MGNVLFVCVENTFRSVLSEALFNAIAPSGWRPESAGVQAATEIN
                     PAVLKLLREIGIELGPKRPRIVTPQMIAGAARVVTFGCLDRCPIGAREKSEDWPIPGA
                     TGKTMDELRAIRDELRRRVTELSKRLPESVVSPTRPQPKD"
     gene            2716..3573
                     /locus_tag="VNA10_05905"
     CDS             2716..3573
                     /locus_tag="VNA10_05905"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HVG37248.1"
                     /translation="MRPLLITHCGAGSDPSVQDAAEVAGARGMEVLARGGRALDSVVE
                     AIVVLEDDPRLNAGTGSRMRIDGRIQMDAALMNWDREAGAVAAIEEVKNPIRVAYDVL
                     KTPHILLAGPDAIEFARSKGHPRYDPSTPESRRNLEESLEKIRNGRLPRYARKWKGVA
                     IHDTVGAVARDRRGRFATGSSTGGLAFMLPGRVGDSPIVGAGLYAGPRGAVSVTGIGE
                     EIIKQVLSKFVYDRIEDGLSPQRAADRGLALFPHDVPIGIIAIASRGWGEAANREMAF
                     FASSARRTF"
     gene            3625..3933
                     /locus_tag="VNA10_05910"
     CDS             3625..3933
                     /locus_tag="VNA10_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37249.1"
                     /translation="MTRRSALTSKIEAEVKLLQRHVAMLKAIMENQPIGIIRLSELLN
                     FPQHKVRYSLRILEQEGLIKPSPEGAVTTDKLEEFLDYLKGVLDSMSGTVQELRKTLG
                     "
     gene            complement(3953..4270)
                     /locus_tag="VNA10_05915"
     CDS             complement(3953..4270)
                     /locus_tag="VNA10_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37250.1"
                     /translation="MIGEKRLFGIIALILGLIAGVLILLLVQSKGGVDVVTLIAGIGV
                     LYGSYLIYRGKTSTLFGWGKTRLGALINLAIGVLTLLIPGGVGGTPSILAIVSGILGF
                     LSA"
BASE COUNT          890 a         1367 c         1442 g          744 t
ORIGIN      
        1 tccgtgccgc gccatttcgc gtcaatgccc ttgagcaaga tatacgttat cgcgcccagg
       61 attgcgagga cgagaccgat gccgatggcc gagagccgaa ggtcccgatc gatcgtgaag
      121 gacaggatcg tcaatccaaa atccgggagc atcgacatca cgctgaaccg cgcgagcacc
      181 ccggggtcga agaggaacga gttggtccgg aggcccgtca ggtaggccgt catcacgacg
      241 atgtacagcg aggtgacgag gacgatcgga atcgcgagcc acagcaatcg tgtgtccgcg
      301 ttcagccacg cgatcaccac gacaaatccg acgccgatcc aggtcgtcat gagaagaaac
      361 gcgatcagtt ttgtccggat cacctgagga acggagatcg gtaccgtcga aaggtaatcg
      421 gtcgcgtcca cgttgttcat ccaattgtag aggatgaccc cgaagaagcc gaccatgccc
      481 gcatagaaga ccgtgttgaa gccgaccggc acctggagcc cgtaccggac gaaccacgcc
      541 gtgaaggaca acaggaggag cggcgtcacg aatgagaaga acatcttcgc gtaggtcccg
      601 ctccgctgaa aatcgaggaa ttccttccca aggagcgcgc tgtaaccctc gaatcggtcg
      661 agccgcgcga tgattccggg gagttcgttg cgggcggcca cacttggagg ctcgaaccgc
      721 tccgggacga ggccgacagc tcccgcgatg agggccgccg cgattcccag cccgagcaag
      781 aggagtgccg cggctcctcc ggcgtttgcg cccaagggcg gtaggagttc gtgggccgcg
      841 aggctcggga ggatccagga gaatgggatc acgcgggcgg ctcccgcggc cgcaaacagc
      901 gcggacacgc cggcggccgc caggacgaat cccacgcggc ttcgcatgta caccgtcgag
      961 acgaagaaac tcagcgacat cccgaggagg aacgagagca gcgcggcccc gaagagcacg
     1021 ccgatgctcg tgagccggaa gtgcgtcacg ggaatggaca tggccaagcc gacggtcgcg
     1081 gggacgagga gcaggaccat gtagaagatc gcgtcgcgga cgaacatgcc caggaacgtt
     1141 cgacggaacc gcatcggcag gatcccgggc atcgcgacga ggtagttgcg tgtccccgtc
     1201 gtccgctcga ggtactgtcg accgagaaat ccgaacgcgc cgacgctcag gccgtagagg
     1261 aagacgctga cgtgcaggag gaggatcgcg tccgggagcg gggtatacgc gaacaagcgt
     1321 ccgctcgtga cggcgatcga caggctgaac atcgtgatga tgaacgggaa cgacacgaac
     1381 atcgtctgac cggaatagct cgcatggacg cggaattcct ctttcagcat gaggcgaagc
     1441 agccagctca tcgtcacgcc ccgaccaggc ggaggaacgc ggactccagg tctgcgtcgt
     1501 cggcccggat ctggtcgacg gtccccgtcg cgatgatcga tccgctccgg atcacaccga
     1561 ctcgatggca cagctttgag gcgatgtcga ggagatggga cgccatgaac gctgtcccgc
     1621 cgccggcgat atactccgtc agaaactgtt tgagcttccg ttggtaaatc ggatcgaggt
     1681 tgatgaacgg ctcgtccagg aagacgagcg ctggcccgtg gatgaacgcc gcggcgagca
     1741 tcaacttctg tcgcgtccct ttcgagaggt ctttgcacaa cgtcgtcccg ccctcgtcca
     1801 gatcgaagaa ctcgaaccaa tgcgcgattc gttcctcgag ccgatcgagt ttccgaaccc
     1861 gcccgacgaa gtacagatac tcgtgggccg tcaagtacga tggcggcgat tccacctcgg
     1921 gcacgatgcc cacgagcgac ttgacctgga gcggctcttg gaccacatca atgttcagga
     1981 cccgcgcgtc tccggtcgtt gggcggagct gccccgtgag gattcgcagc atcgtcgtct
     2041 tgcccgcccc gttcgggccg aacagtccga agaattcccc cggttcgact acgaggtcga
     2101 tccccttcag tgcgtccacg gtcccgtagc gtttcgtgag ctgggacgct tggatcgcgg
     2161 gcacgccgcc gccgacgcgg gccgcgttat ataggccttg gcgcgtgatt atcgaggcgg
     2221 cctcgcgaat ctatttgcca cgcggacgtc tgtcttgtcc cgtgggcaac gtcctcttcg
     2281 tctgcgtcga gaacacgttc cggagtgtgc tctcggaggc gctcttcaat gcgatcgcgc
     2341 cctccgggtg gcgcccggag agcgcggggg ttcaggcggc aaccgagatc aatccggccg
     2401 tgctgaagtt gctccgagaa atcggcatcg agctcggtcc gaagagacct cggatcgtca
     2461 cacctcaaat gatcgccggc gcagcgcgag tcgtgacctt tggatgtctc gatcggtgcc
     2521 cgatcggcgc tcgcgagaaa tccgaagatt ggcctatccc gggtgccacg gggaagacga
     2581 tggacgaact tcgcgcgatc cgggacgaac tccgccgccg cgtgaccgaa ctctcgaagc
     2641 gtctgccgga gtccgttgtc tcaccgacga gaccgcagcc aaaagattga aacctcccgc
     2701 accggtgccg ccggcgtgcg gccccttttg atcacgcatt gcggcgcggg ctcggatccc
     2761 tccgtccaag atgcggcgga agtcgcaggg gcccgcggca tggaggtctt ggcccgcggg
     2821 ggccgtgcgc tcgattcggt cgttgaggca atcgtggtcc tcgaagacga tccgcggttg
     2881 aacgcgggga ccggctctcg gatgcgcatc gacggtcgga ttcagatgga cgcagccctg
     2941 atgaactggg accgcgaagc gggcgccgtc gccgccatcg aggaggtgaa gaacccgatc
     3001 cgggtcgcgt atgatgtcct gaagacgccg cacatcctcc tcgcgggccc cgacgcgatc
     3061 gagttcgcac ggtcgaaggg ccacccgcga tacgatccgt cgacgccgga atcccgccga
     3121 aacctcgaag agagcctcga gaagatccgg aacggacggc tgccgcgata cgcgcggaag
     3181 tggaaaggcg tcgcgatcca cgacacggtc ggcgcggtcg cgcgggaccg gcgcggtcgc
     3241 ttcgccaccg gctcatcgac gggaggcctt gcgttcatgc tcccgggccg agtcggcgat
     3301 tctccgatcg tcggcgcggg attgtatgcc ggccctcgcg gcgcggtctc cgtcaccggg
     3361 atcggcgagg agatcatcaa gcaggtcttg tcgaagttcg tatatgaccg catcgaagac
     3421 ggtctctcgc cccagcgggc ggcggatcgc gggctcgcgc ttttccccca cgatgtcccg
     3481 atcggaatca tcgcgattgc gtcgcgggga tggggcgagg ccgccaaccg cgagatggca
     3541 ttcttcgcgt catccgcgcg tcgaaccttt taagacagcc cgcgttatca cggaccatgt
     3601 cacgttttgt agggggaggt tttcgtgacc cgtaggagcg cgctcaccag caagatcgag
     3661 gccgaggtca agctgctgca gcgacatgtc gcgatgctga aggcgatcat ggagaatcag
     3721 ccgatcggga tcatccgact ctcggagctc ctcaacttcc cgcagcacaa ggtccggtat
     3781 tcccttcgga tcttggagca ggagggattg atcaagccct cgcccgaagg ggcggtgacg
     3841 acggacaagc tggaggagtt cctcgactat ctgaaaggcg tcctcgattc gatgtcgggg
     3901 acggtccaag agctccgcaa gacgctcggg tgatcggacc cgaacggtgc gttcacgcgg
     3961 aaaggaaccc gaggatccca ctcacgatcg caaggattga cggggttccg ccgactccac
     4021 cagggatcaa aagggtcaac acaccgatcg cgaggttgat caacgccccg aggcgggtct
     4081 tcccccatcc gaacagggtg ctcgtctttc cccggtagat cagatagctc ccgtacagca
     4141 cgccgatccc cgcgatcagc gtgacgacgt cgacgcctcc cttcgattga acgaggagaa
     4201 ggatcagcac tccggcgatg agcccgagga tgagggcgat gatgccgaag aggcgcttct
     4261 caccgatcat cggcgggccg agagacccat cctatctaag gcttgtgaat cggatgtcga
     4321 actcggcggc tcggttattt aatagctttg gctagagtgg tgtcggaggc tcggagccac
     4381 gcctccactc cggtgcggcg cagaaactat ttgaggaccc ctcttgtatc gcatcacaag
     4441 ccg
//
LOCUS       DATLMA010000462         1862 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_44480, whole genome shotgun sequence.
ACCESSION   DATLMA010000462 DATLMA010000000
VERSION     DATLMA010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44480"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /gene="sufD"
                     /locus_tag="VNA10_05920"
     CDS             <1..756
                     /gene="sufD"
                     /locus_tag="VNA10_05920"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HVG37251.1"
                     /translation="GAGSQATVIETYAGWAPDVTFTNAVTEVAAGPAAVLDHYKIQRE
                     AETAFHIATMTVHQDRDSSVSAHSISLGGSLSRNYVHTLFRAPGGSLTLNGLYMTAGT
                     QQADNYTRIDHVAPACTSIELYRGILGGRSRGVFNGNIYVRKDAQKTVARQTNKNLLL
                     SNEAFVDSTPGLEILADDVKCSHSSTIGQLDESAVFYLRSRGIDEEAARNILTYAFAA
                     DVINQVKVAPVRIKLDQLVVSRLPRGAGFGETL"
     gene            814..1263
                     /locus_tag="VNA10_05925"
     CDS             814..1263
                     /locus_tag="VNA10_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HVG37252.1"
                     /translation="MPDLRELYQDTILDHSKRPRNFREIAGASATAVGHNPLCGDRVT
                     VYLRLDDATIADVSFVGQGCAISKASASLMTDAVKGKSKAEAHGLFERFHKMVTARPG
                     DPVDGSLGKLAVLSGVCEFPVRVKCASLAWHTLEAALERKQETVSLE"
     gene            1269..>1862
                     /locus_tag="VNA10_05930"
     CDS             1269..>1862
                     /locus_tag="VNA10_05930"
                     /inference="COORDINATES: protein motif:HMM:NF040245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37253.1"
                     /translation="MSEDAPRTALEEAGGLIAIGPGPSAGVIRGFSKSRREPDWMLRL
                     RLRALERLHADGVPGWASFLREVDFDGMVQTEPIRQTSVVEVGEPDVLPGLGALEESE
                     AAYRAVRKELESQGVVFRGLAAALLDKPDLVKAHFAKAIAVDDHPIAALNATLWSGGS
                     FLYVPPGVHVEIPLQAEIRADYAKVEPFERNLIVADRG"
BASE COUNT          325 a          632 c          610 g          295 t
ORIGIN      
        1 ggggcgggca gccaagcgac cgtgatcgag acgtacgccg gatgggcccc cgacgtcacc
       61 ttcacgaacg ccgtcaccga ggtcgccgca ggcccggcgg cggtcctcga ccactacaag
      121 atccagcggg aagccgagac cgcgttccac atcgcgacga tgacggtcca ccaggatcgc
      181 gactcgtccg tctcggccca ttcgatctcc ctcggcggga gcctgtcgcg taactacgtg
      241 cacacgctct tccgggcccc cggcggaagc ctcaccctga acggcctgta catgaccgcg
      301 gggacgcagc aggcggacaa ctacacgcgc atcgaccacg tcgcacccgc gtgcacgagc
      361 attgagctct accgcggaat cctgggcggc aggtcgcggg gcgtgttcaa cgggaacatt
      421 tacgtccgca aggatgcaca gaagacggtc gcgcgacaga cgaacaagaa cctcctcctg
      481 tcgaacgagg ccttcgtcga cagcacgccg ggcctggaga tcctcgcgga cgacgtgaag
      541 tgcagccact cctccacgat cgggcaactc gacgagagcg cggtgttcta cctccgctct
      601 cgaggcatcg acgaggaggc ggctcggaac atcctgacgt acgcattcgc ggccgacgtc
      661 atcaaccagg tgaaggtcgc cccggtccgg atcaagctcg atcagctggt cgtctcgcgc
      721 ctgccgcgag gcgcgggctt cggggagacc ttatgaagcg cggccccgat tctatcctca
      781 tggacccgcg cgcccgcgcg ggaggtccgc tgaatgcctg atcttcgcga actctaccag
      841 gacacgatcc tcgaccacag caagaggccg aggaacttcc gcgagatcgc cggtgcgagc
      901 gcgacggccg tcggccacaa cccgctctgc ggggatcgcg tgacggtgta cctgcgcctc
      961 gacgatgcga cgatcgcgga cgtctcgttc gtcggccaag ggtgcgccat ctcgaaggcg
     1021 tccgcatcct tgatgacgga tgcggtgaaa ggcaagtcga aggcggaggc ccatggcctc
     1081 ttcgagcgat tccacaagat ggtcacggcc cgcccggggg atccggtcga cggttccctc
     1141 gggaagctcg ccgtcctctc gggcgtgtgc gagttcccgg tccgcgtgaa gtgcgcgagc
     1201 ctcgcttggc acaccctcga ggcggccctc gaacggaagc aggagaccgt ttccctggag
     1261 tgacaatcgt gtccgaggac gctccccgga ccgccctcga ggaggcaggc ggtctcatcg
     1321 cgattggccc gggaccaagc gcgggcgtga tccggggttt ctcgaaatcg cgccgcgagc
     1381 cggactggat gctgcgcctc cgactccgcg ccctagagcg gttgcatgcc gacggagtcc
     1441 cgggttgggc ctcgttcctg cgggaggttg acttcgatgg gatggtccag acggaaccga
     1501 tccggcagac ctccgtcgtc gaggtcggcg aaccggacgt cctcccgggc ctcggggcac
     1561 tcgaggaatc cgaagccgcc tatcgggcgg tccggaagga actcgaatcg cagggtgttg
     1621 tgttccgcgg actcgccgcc gctctcctcg acaagccgga cctcgtgaag gcccatttcg
     1681 ccaaggcgat cgccgtcgat gatcacccga tcgccgcgct caacgccacc ctgtggtcgg
     1741 gcggctcatt cctgtacgtg ccgccgggtg tccacgtcga gattcctctt caagcggaga
     1801 tccgtgcgga ttacgcaaag gtcgaaccgt tcgagcggaa cctcatcgtc gcggatcggg
     1861 gc
//
LOCUS       DATLMA010000463         1293 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_104664, whole genome shotgun sequence.
ACCESSION   DATLMA010000463 DATLMA010000000
VERSION     DATLMA010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104664"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VNA10_05935"
     CDS             complement(<1..395)
                     /locus_tag="VNA10_05935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37254.1"
                     /translation="MWVVFLIVLSMFTSIFLVHLMAQNAAGQAPAFVVNVGVQDEMKT
                     RNLVRGFFFGTDVWTADALNPVGEGTVQTDPETQTVLPYTMVGTDVNGDGKLEANEVG
                     VFSNVQGIPSRASEWVAFFSIKGMKWHDGT"
     gene            complement(543..>1293)
                     /locus_tag="VNA10_05940"
     CDS             complement(543..>1293)
                     /locus_tag="VNA10_05940"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HVG37255.1"
                     /translation="VLLSASVGTVSPDRVITDARGHASFAFTADVNEDTLVQITAWTN
                     LDGAAQGIDAFAVRVVRLPPPPIYAQVGIVSLGVLGGLAAFLSWTEPGRHAIFGAFFP
                     LYTRLKKEEVLDHFVRGQVFGVIKTEPGTHFTELRDNLGLSNGTLSYHLRTLEVAGFI
                     RSERDGMYKRFFAADAEPERGGEGIRLSTLQRLLVDFLRRNPESAQRDLALHAGVTQQ
                     TVSYNLRILQKQGVLQTVSRGRRQVYLATDG"
BASE COUNT          240 a          426 c          390 g          237 t
ORIGIN      
        1 gttccgtcgt gccacttcat ccctttgatg ctgaagaacg cgacccactc actcgcgcgg
       61 ctcgggatcc cctgcacgtt cgagaagact ccgacttcgt tcgcttcgag cttcccgtca
      121 ccgttgacgt ccgtgccgac catcgtgtac ggcaagacgg tctgcgtctc cggatccgtc
      181 tggacggttc cctccccaac tgggttcaat gcgtccgcgg tccacacgtc cgtcccgaag
      241 aagaatcctc gaaccagatt cctcgtcttc atctcgtcct ggacgcccac gttgacgacg
      301 aacgccggcg cctggcccgc cgcattctgg gccatcaggt ggacgaggaa gatggacgtg
      361 aacattgaca gtacaatcag aaagacgacc cacacgtgtc gcgacaagtt tgtccgcctc
      421 cgctccgcgg ccattggtca accgaccaac tgccgtcccc accatcagat ggggcgaacc
      481 gtattaaatc agattggtac ggcgttttgt aagccgacga attagggaaa tcgcgcgctc
      541 gctcaaccat ccgtcgcgag atagacctgg cgacgtccgc gagagacggt ttgcaagacg
      601 ccttgcttct gcaggatccg caagttgtag ctgactgtct gttgcgtcac gccggcgtgg
      661 agggccagat cccgctgcgc cgattccggg ttccgccgga ggaaatcgac caacaatctc
      721 tggagcgtgc tgagccggat gccctcgccc ccgcgctcgg gctcggcgtc ggccgcgaag
      781 aaccgcttgt acattccgtc ccgctcggat cggatgaagc ccgcgacctc gagcgtccgc
      841 aggtggtacg acaacgtccc gttcgagagg ccgaggttgt cgcgcagctc ggtgaagtgc
      901 gtccccggtt ccgtcttgat gaccccgaac acctggccgc ggacgaagtg gtcgaggacc
      961 tcctccttct tgagtctcgt gtagagaggg aagaacgcgc cgaagatggc gtgccgcccg
     1021 ggttccgtcc acgaaaggaa cgccgcgagg cctccgagga ccccgaggga gacgatcccc
     1081 acctgcgcgt agatcggcgg cggaggtagt cgcacgacgc ggacggcgaa ggcgtcaatg
     1141 ccctgcgcgg caccatcgag gttggtccac gccgtgatct ggacgagcgt gtcttcattg
     1201 acatccgcgg tgaatgcgaa cgatgcgtgg ccccgggcat ccgtgatcac gcgatccgga
     1261 ctgacggttc cgaccgacgc gctcagcaac acc
//
LOCUS       DATLMA010000464         1044 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_709253, whole genome shotgun sequence.
ACCESSION   DATLMA010000464 DATLMA010000000
VERSION     DATLMA010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709253"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VNA10_05945"
     CDS             complement(<1..272)
                     /locus_tag="VNA10_05945"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37256.1"
                     /translation="MCADQRFGKTAVAEGVRTSGREPAVAAQVRLASREEEEAQAVAL
                     AERLGLPYVDVSSFRVDPDLFRSIPVEWMLRYTFIPEKRTDKAMTV"
     gene            complement(278..>1044)
                     /locus_tag="VNA10_05950"
     CDS             complement(278..>1044)
                     /locus_tag="VNA10_05950"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HVG37257.1"
                     /translation="YLKYQKTIIAISRKVISTLVYPAILLVMSAGLIAVLMTVVVPKF
                     QQFFADFHADLPLLTVIVVGIAGFLRDNIIWLLPALVFAGYLSMRWVKTPAGREWSDG
                     VLLKLPFLGGLFRRFAITQFTRSLATLLGGGTPLVPSLENAAEAIGNRHIARRVREVV
                     PKVREGGELWHSLESTGIFTNLTIEMIKVGETSGALEEMLTAVSDFYDEEIDVLLARV
                     ITLVEPAILVMMGGVIVTILLSVYLPIFKIMSQIKG"
BASE COUNT          204 a          330 c          333 g          177 t
ORIGIN      
        1 atgaccgtca tcgccttgtc ggtgcgtttc tccgggatga acgtgtatcg aagcatccac
       61 tcgaccggaa tcgagcggaa gaggtcgggg tccacgcgga aggaggagac gtcgacgtac
      121 ggcaggccga gccgctccgc gagagcgacg gcctgcgcct cctcctcctc tctcgacgcc
      181 agacgaacct gcgccgcgac ggccggttcg cggccggagg tccgaacccc ttccgcaacg
      241 gccgtctttc cgaatctctg gtccgcgcac atcgtcttta ccctttgatc tgggacatga
      301 tcttgaaaat cggcaggtac accgacagca ggatcgtgac gatcacgccc cccatcatca
      361 cgaggatcgc cggctcgacg agcgtgatca ctcgcgccag cagcacgtcg atctcctcgt
      421 cgtagaagtc cgaaacggcc gtgagcattt cctcgagcgc gcccgaggtc tcgccgactt
      481 tgatcatttc gatcgtcagg ttggtgaaga tgccggtcga ttcgagtgag tgccacagct
      541 cgccgccctc gcgcactttc gggacgacct cgcgcacgcg ccgcgcgatg tgacggttcc
      601 cgatcgcctc ggccgcgttc tcgagcgagg gtacgagcgg cgtgccccct ccgagcagcg
      661 tcgcgaggct tcgagtgaac tgcgtgatcg cgaagcgccg gaaaagacct ccgaggaacg
      721 ggagcttgag aaggacgccg tcggaccact cgcgtccggc cggtgttttc acccaacgca
      781 tcgacagata gccggcgaac acgagcgccg gcaggagcca gatgatgttg tcgcgcagga
      841 aaccggcgat tccaacgacg atcaccgtca ggaggggcag gtccgcgtgg aaatcggcga
      901 agaactgctg gaacttcggg acgacgacgg tcatgaggac ggcgatcagc ccagcggaca
      961 tcacgaggag gatcgccgga tacacgagcg tcgagatgac cttgcgcgag atggcgatga
     1021 tggtcttctg gtacttcagg tacc
//
LOCUS       DATLMA010000465         1420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_286029, whole genome shotgun sequence.
ACCESSION   DATLMA010000465 DATLMA010000000
VERSION     DATLMA010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286029"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VNA10_05955"
     CDS             <1..461
                     /locus_tag="VNA10_05955"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HVG37258.1"
                     /translation="TPGDYTATLSVWDDSGNTATATRAITVLDTQAPVARGGGDRTVD
                     EGQSLFFDASASTDNVGVTSYRWDFGDNSSSSAAAVSHVYTRPGTYSARLTVMDAAGN
                     SATSTFTVTVRAISPKPSDLLGMIQILEAIIAILAAALAFVGWLLFGMRN"
     gene            complement(650..>1420)
                     /locus_tag="VNA10_05960"
     CDS             complement(650..>1420)
                     /locus_tag="VNA10_05960"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG37259.1"
                     /translation="VKDLKAARAFYTKKIGLKVRSAMPKWGYLALGATKGGEDAALTP
                     WQPVPEWGQEIYEARLKAIGGVTGIGFITNDLKRTIADLKKKGVKTGVDGDSETFGRF
                     TDPDGNVLFIGQPAKPKIRRAGLSTLGFVTVASRDAKKTGEFFRKALGMRVQREQGEE
                     EGFVSYQLSPKATAITPFTPRKDMYDNPADYDADMAHVGEETGIGFTTPEVYRLQEQL
                     LGKGVRFKAKAEAQEWGGIMARFFDPDDNVYSLVEYKA"
BASE COUNT          224 a          498 c          425 g          273 t
ORIGIN      
        1 cgaccccggg cgattatacc gcgaccctga gcgtctggga cgactccggg aacaccgcca
       61 ccgccactcg cgcgatcact gtcctcgata cgcaggctcc cgtggcacgc ggtggtggcg
      121 atcggacggt cgacgaggga cagtccctct tctttgacgc atccgcatcc acggacaacg
      181 tcggcgtgac atcgtatcgc tgggacttcg gggacaactc gtcttcaagc gccgcagcgg
      241 tcagccatgt ctacacccga ccggggacgt attccgccag gctgacggta atggacgcgg
      301 ccggcaactc ggcgacgtcc acgttcaccg tgaccgttcg cgccatttcg ccgaagccga
      361 gcgacctcct cgggatgatc cagatcctcg aggcgatcat cgcgatcctc gcggcggctc
      421 tagcgttcgt cggatggttg ctcttcggga tgcggaactg agaacgacgg ccatcgacgg
      481 cgacgccggc gcgcccaccg agcccgcccc ccgagccgat gccaccgttg ccgcaggcgc
      541 ccttgcctcg ggaggcggat cctctcgaca tgacgttgcc gccaaagggc ccatagcgga
      601 gatggtaagg cggaccccaa gggcccgcca cgttgtcttt tcttcaggcc tacgccttgt
      661 actcgacgag ggaatagacg ttgtcgtccg gatcgaagaa ccgcgccatg atgccgcccc
      721 attcctgggc ttccgccttc gccttgaacc ggacgccttt cccgagcaac tgctcctgca
      781 gccgatagac ctccggggtc gtgaagccga tcccggtctc ttcgccgacg tgggccatgt
      841 ccgcatcgta atccgcgggg ttgtcgtaca tgtccttcct cggggtgaag ggcgtaatcg
      901 cggtggcctt cggcgagagc tggtaggaga cgaagccctc ctcctcaccc tgttctcgct
      961 gcacgcgcat gcccagagcc ttgcggaaga actcgcctgt cttcttcgcg tcgcgcgatg
     1021 cgaccgtcac gaacccgagg gtcgatagcc cggcgcgccg gattttcggc ttcgcgggtt
     1081 ggccgatgaa caggacgttg ccgtccggat ccgtgaagcg cccgaaggtc tccgagtcgc
     1141 cgtcgactcc ggtcttcacg ccctttttct tcaggtccgc gatcgtccgc ttcaggtcgt
     1201 tggtgatgaa accgatcccc gtgacgccgc cgatcgcctt caaccgcgcc tcgtagatct
     1261 cttggcccca ctccgggacc ggctgccatg gtgtaagggc cgcgtcttcg ccacccttcg
     1321 tcgcgccgag ggccagatag ccccacttgg gcatcgccga tcgcaccttc agcccgatct
     1381 tcttggtgta aaacgctcgc gccgctttca ggtccttcac
//
LOCUS       DATLMA010000466         1126 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_649396, whole genome shotgun sequence.
ACCESSION   DATLMA010000466 DATLMA010000000
VERSION     DATLMA010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649396"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1126
                     /gene="gatE"
                     /locus_tag="VNA10_05965"
     CDS             <1..>1126
                     /gene="gatE"
                     /locus_tag="VNA10_05965"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF003107.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase subunit GatE"
                     /protein_id="HVG37260.1"
                     /translation="GLEIHQQLAAHKLFCEDVSALVDTAAGQRFRRRLRPTQSELGEV
                     DAAALEEAKRRLTFVYETTTNSCLVEADEEPPHPPNPEALDIALEIALLLNARPVSEV
                     DFMRKIVIDGSNTSGFQRSALVAMDGWLETNGKRIGVPTILLEEDAARKLGEAENEVV
                     YRLDRLGIPLVELATTPNIETPDEARDVALTFGSLLRATRKVKRGIGTIREDLNVSIE
                     GGARIEIKGVQELRMIATFVEREVERQAMLLAVAVELKKRNIRSVPTNVRDVTTVFRE
                     TESKVVRTALKKGGVVLGWALPGFAGLLKGKLGPELAAHARIAGVAGIFHSDELPGYG
                     ITQAELDAVRNGLRLGAPDACVLVAEEETKARLAIDEMGPR"
BASE COUNT          218 a          346 c          381 g          181 t
ORIGIN      
        1 cggcctggag atccaccagc agctcgcggc gcacaagctc ttctgcgaag acgtctcggc
       61 cctggtcgac acggccgccg gccaacgatt ccgtcgccgg ctccgtccaa cgcagtccga
      121 gctcggagag gtcgacgccg cggcactcga ggaagcgaag cggcgtctca cgttcgtcta
      181 cgagacgacg acgaattcct gcctcgtcga agcggacgaa gagccgcccc atccgcccaa
      241 tccggaggcc ctcgacatcg cgctcgagat tgcgctcctc ctgaatgcga ggcccgtgag
      301 cgaagtcgac ttcatgcgga agatcgtaat cgacggctcg aacacatccg gctttcagcg
      361 ctccgcgctc gtggccatgg acgggtggct cgagacgaat gggaagcgga tcggcgtccc
      421 cacgatcctc ctcgaggaag acgccgcgcg gaaactcgga gaggccgaga acgaggtcgt
      481 ctatcggctg gaccgtcttg ggattccgct cgtcgagctt gccacgacgc cgaatattga
      541 aaccccggac gaggcacggg atgtcgcgct gaccttcggg tccctccttc gcgcgacccg
      601 aaaagtgaag cgcgggatcg ggacaatccg ggaggacctc aacgtctcca tcgagggcgg
      661 tgcgcggatc gaaatcaagg gagtccaaga actccgaatg atcgccacgt tcgtcgagag
      721 agaggtcgag cggcaagcga tgctcctggc cgtggcggtc gaactgaaga agcgcaacat
      781 ccgatcggta ccgacgaacg tccgtgatgt gaccaccgta tttcgcgaga cggaatcgaa
      841 ggtcgtccgg acggctttga agaagggcgg tgttgtcctg ggttgggccc tgcccggctt
      901 cgccgggttg ctgaaaggaa agctcggtcc cgagttggcg gcccacgccc gaatcgcggg
      961 cgtcgcagga atcttccatt ccgatgagtt gcccgggtac ggaatcacgc aggcggagct
     1021 cgacgcggtg cggaacgggc tgcggcttgg cgcgccggat gcctgcgtgc tcgtggcgga
     1081 agaggagacg aaagcccggc ttgcgattga tgagatgggc cctcgg
//
LOCUS       DATLMA010000467         1590 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_167269, whole genome shotgun sequence.
ACCESSION   DATLMA010000467 DATLMA010000000
VERSION     DATLMA010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167269"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..686
                     /locus_tag="VNA10_05970"
     CDS             405..686
                     /locus_tag="VNA10_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37261.1"
                     /translation="MPRNRRKYSRREKAFGWVGATTFGALSGVLILATHVFGGLGLMA
                     VVFGLWTGALVGAWGFAVGAALARITDPAQVPPVMTGWPVTAKKVPKSK"
     gene            complement(715..1332)
                     /locus_tag="VNA10_05975"
     CDS             complement(715..1332)
                     /locus_tag="VNA10_05975"
                     /inference="COORDINATES: protein motif:HMM:NF014099.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translin family protein"
                     /protein_id="HVG37262.1"
                     /translation="MKNLDDVISEIEGRLDEKDEVRELTIKSSRTIARLSGSAIQAMH
                     RGHDVGTALQETREEILKLRSLLKDHPDLYHTGIVENAMQEAGEAFLVHAILEQDPLP
                     SPKDLGLTDTAYLLGLGDVVGELRRVALEHLRRGDVKQASGYLEKMERILDSLMRFDY
                     PTALVALKRKQDVARSLIEKTRGEVAVASRSQELADKLDAVREKL"
BASE COUNT          296 a          463 c          493 g          338 t
ORIGIN      
        1 gtcgacttgg gccagaatcc gccttcgatc agatcgtcga gtccaggaat cccgctcgga
       61 actctctcga tgtccgccat ggtcatgttc cccctggcgg ccggtccctc cgcggggagg
      121 gcggggcctc gctgggtaga atgcacgatt cgatggctgc ggctttttaa atgaattccg
      181 accccggaat ccgcattgat aacgtaggtc ggccggtttg aacggtggca gatacgggag
      241 gcacagggtc aacgaacgag ccattcctcg aatcggttca aactcgagcg aactgacgtg
      301 ttcagcaagg accgagaaca tcgtgggttt cggcgtaatg atgtcgtcgg cgctggggtc
      361 gttgaggaaa gactttgacc cgccaagaca atcgcgattt cgggatgccg agaaaccgtc
      421 gcaagtactc gaggcgcgaa aaggcgttcg ggtgggtagg ggcgacgact ttcggtgccc
      481 tctccggtgt gctaatcctg gcgacgcacg tcttcggtgg gcttgggctg atggccgtag
      541 tctttgggct ctggaccgga gctctggtcg gggcttgggg atttgcggtt ggagccgccc
      601 tcgctcgcat cacagatccc gctcaagtgc cgccagtgat gacgggatgg cctgtcaccg
      661 cgaagaaagt tcccaagtcc aaatagtcct gggaaaaggg tctagaatcc cgccctacag
      721 cttctctcgg accgcgtcga gtttgtcggc gagctcctgg ctacgggaag cgaccgctac
      781 ttctcctcga gtcttctcga taaggcttcg tgcgacatcc tgcttgcgct tgagggcgac
      841 caaggccgtc ggatagtcga agcgcatgag ggaatctaag atccgttcca tcttctcgag
      901 ataaccggat gcttgcttca cgtccccgcg acggagatgt tcgagggcaa cccggcgcaa
      961 ctcaccgacg acgtctccga ggccgaggag gtatgcagtg tcggtgagac ctaggtcctt
     1021 cggactggga aggggatcct gttccaggat cgcgtggacc aggaacgcct cgcccgcctc
     1081 ctgcatcgcg ttctcgacaa tcccggtgtg atacaggtcc ggatggtcct tcaggaggct
     1141 tcggagcttc aggatctcct cgcgcgtctc ttgtagcgcc gttccgacgt cgtgtccgcg
     1201 gtgcatcgct tggatcgcgc tcccgctcaa ccgtgcgatc gttcgagacg acttgatcgt
     1261 cagctcgcgg acctcgtctt tctcgtccaa ccggccctcg atctcggaga tgacgtcatc
     1321 gagattcttc acggcgcgag gatgacccat cccgttattt gagggttggc ccccagtgat
     1381 gccggggatg cgaccagccg gaatgcgggc cccgctggcg cgtggttaca ctcctcacca
     1441 aatgaagcaa ccaaccatgc cacaacactt ttccacgcca tcgtgattca gaaacgcgag
     1501 gcagtcgaga tggccgagaa cctgaccatg gtgggccgcg tcgtttcgct gtttcggtat
     1561 ccagtcaaat cgatgatggg cgaagagctg
//
LOCUS       DATLMA010000468         1561 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_464335, whole genome shotgun sequence.
ACCESSION   DATLMA010000468 DATLMA010000000
VERSION     DATLMA010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464335"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VNA10_05980"
     CDS             <1..289
                     /locus_tag="VNA10_05980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37263.1"
                     /translation="SAIDLSREYGIPIAACYRRIHALERAGLIRCTERALTQKGKRIS
                     LYMSQLKNAYIFFENGRLRVRFQLATGITKDFGGDWRAVDVIEPSYPTPTQ"
     gene            492..722
                     /locus_tag="VNA10_05985"
     CDS             492..722
                     /locus_tag="VNA10_05985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37264.1"
                     /translation="MVRLTMDRDRMKYLFREILGVDVDDVVRKVVATIAVERSKQVQQ
                     NTKEWKRYMEAEGGIVILPSNVTQLGRRDPKK"
     gene            811..>1561
                     /gene="pyrB"
                     /locus_tag="VNA10_05990"
     CDS             811..>1561
                     /gene="pyrB"
                     /locus_tag="VNA10_05990"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HVG37265.1"
                     /translation="MSSFRGRDVLSIRDFTPADIQLVLRTARKMVPIAIGEKRSRSLE
                     GKILSTLFYEPSTRTRLSFESAMARLGGRALGFSSAEGTSVQKGETLADTIRMVEAYS
                     DAIVLRHPHEGAARLAADFTEKPVINAGDGAGQHPTQTLLDLYTIWDEKGAFEGQNVA
                     LVGDLKYGRTVHSLAYALAELGAHLTFVSPPTLEMPSEILERVKEKGLSFRATHRLEE
                     VIREADVLYVTRIQKERFPDPQEYEKVAGSYR"
BASE COUNT          309 a          522 c          467 g          263 t
ORIGIN      
        1 gtccgcgatc gacctgagcc gcgagtacgg gatcccgatc gccgcctgct accgacgcat
       61 ccacgccctc gagcgcgccg gcctgatccg gtgcacggag cgagcgctca cgcagaaggg
      121 caagcggatc tccctgtaca tgtctcagct caagaacgcc tacatcttct tcgagaacgg
      181 tcggctgcgg gtacgattcc agctggcgac cggcatcacg aaggacttcg gtggcgactg
      241 gcgagccgtg gacgtcatcg aaccgagcta cccaacccca acccaataac ccctcctcca
      301 caacccacag gcaggaccga gaacccctcg tcctgcctct tttattcttg ccatgagcgg
      361 aggggacctg ccgctttcgg acccctgtgg gggcccagtt gacaaagcgc caatcggcca
      421 tcgtcggacg gtgccgccgg tcctctcaaa actgagaccg ttgacaattc tctcatatac
      481 ggccgcctcg gatggtccgg ctcaccatgg accgggaccg gatgaagtac ctgttccgcg
      541 agatcctcgg cgtcgacgtc gatgacgtcg tgcgaaaggt cgtcgcgacg atcgccgtgg
      601 agcgttccaa gcaggtgcag cagaacacca aagaatggaa gcggtacatg gaagccgagg
      661 gcggaatcgt gatccttccc tcgaacgtca cccagttggg gcggagagac ccgaagaaat
      721 gagccggccg cgggcggttg cgcggcactc tccctttccc tcctatcgtc cgcggattgt
      781 tttaaatcga acctacgaat tagggacttg atgtcaagct tccgggggag agacgtcctc
      841 tcgattcgcg acttcactcc ggccgacatc caactcgttt tgaggaccgc ccgcaagatg
      901 gtcccgatcg ccataggcga gaagcgctcc cggtccctcg agggcaagat cctctccacg
      961 ctcttctacg aaccctccac gcggacccga ctctcctttg agagcgcgat ggcgcggctc
     1021 ggagggcgtg cgctcggatt cagcagcgcg gagggcacct ccgtccaaaa aggcgagacg
     1081 ctcgccgaca cgatccgcat ggtcgaggcg tacagcgacg cgatcgtcct gcgccatccg
     1141 cacgaaggcg cggctcggct cgccgcggac ttcaccgaga agccggtcat caacgcgggc
     1201 gacggcgccg gccagcatcc gacccagacc ctcctcgacc tgtacacgat ctgggacgag
     1261 aagggtgcct tcgaaggcca gaacgtcgcc ctggtcggcg acctgaagta cggtcgcact
     1321 gtccactcgc tcgcatacgc tctcgccgaa ctgggagccc accttacctt tgtgagtccg
     1381 ccgacactgg agatgccgtc ggagatcctc gagcgggtga aggagaaggg tctttcgttc
     1441 cgggcgacac accgcctcga agaagtgatc cgcgaagccg acgtcctcta cgtcacccgg
     1501 atccagaagg agcggttccc ggacccgcag gagtacgaga aggtcgccgg ttcgtatcgc
     1561 g
//
LOCUS       DATLMA010000469         1060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_105433, whole genome shotgun sequence.
ACCESSION   DATLMA010000469 DATLMA010000000
VERSION     DATLMA010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105433"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VNA10_05995"
     CDS             <1..554
                     /locus_tag="VNA10_05995"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HVG37266.1"
                     /translation="RSTAGGVPVVDTNGRLIGILTEGDLIAETLAGEYRRAFGTSVGE
                     VMTAMPVSVSPDTSLEDVAAVMRAHGVRVVPVLADDELVGVVSSADVIEGLVDRSETD
                     GVMASDVELEREMRRRMQQEPWLSTRNILVQVEGGIVSLHGLADSEAERSALVTMARA
                     IPGCRGVDPHLLLRPDVLRHYAT"
     gene            623..850
                     /locus_tag="VNA10_06000"
     CDS             623..850
                     /locus_tag="VNA10_06000"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HVG37267.1"
                     /translation="MTKPVIVLIEDDPAARRLLRTILLSQGYRLFEAATGVNGLAEAA
                     SRRPDVVVVDLGLPDMDGVDVIRRHRQPRGG"
     gene            840..>1060
                     /locus_tag="VNA10_06005"
     CDS             840..>1060
                     /locus_tag="VNA10_06005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37268.1"
                     /translation="MADDYVKGLGRGPWGPTDLVPFSDFLAMYDEFEALVDAELRKAG
                     DDPDWKSLRFGWGRLRPKARQALVLLGQD"
BASE COUNT          178 a          327 c          369 g          186 t
ORIGIN      
        1 ctcgatcaac agctgggggg gtgccggtcg tggacacgaa cggtcgcctc atcggcatcc
       61 tcaccgaggg cgatctgatc gccgagacac tggccggcga gtatcggaga gcgttcggca
      121 cgagcgtcgg cgaggtgatg acggcgatgc ccgtctccgt gagtccagac acctcgctcg
      181 aggacgtcgc ggccgtgatg cgcgcgcatg gcgttcgcgt ggtcccggtc ctggccgatg
      241 acgagctcgt cggggtcgtc agtagcgccg acgtgatcga ggggctggtg gatcggtcgg
      301 agaccgacgg tgtcatggca tccgatgtcg agctggagcg agagatgcgg cggcgcatgc
      361 agcaggagcc ctggctctcc acccgaaaca tcctcgtcca ggtcgagggc ggcatcgtgt
      421 cgctccatgg tctggcggac agtgaggccg agcgatcggc gctcgtgacg atggcccgcg
      481 cgatcccggg gtgtcgagga gtcgatccgc atctcctgct tcgaccagat gtcctacggc
      541 actacgcgac ttgaagatgc gactggacct cggcgacggg atcaggggct cggccctcgc
      601 gtagcccgac gaggtcgtcg aaatgactaa accggtcatt gtcctgatcg aggacgaccc
      661 ggcggcgcga cgccttctcc ggaccatcct gctgagtcag ggctatcgcc tgttcgaggc
      721 agccaccggg gtcaatgggc tcgccgaggc cgccagccga cggccggacg tcgttgtcgt
      781 cgatctcggt cttccagaca tggacggagt cgacgtgatc cggagacacc gacagccccg
      841 tggcggatga ctatgtgaag ggcctcggtc gaggtccatg ggggccgacg gaccttgtcc
      901 ccttttccga tttcctcgcc atgtacgacg aattcgaggc actagttgat gcggaactgc
      961 ggaaagcagg tgacgacccg gactggaaaa gcctccgctt tggttggggc cgccttcgtc
     1021 cgaaggcacg ccaagccctc gtcctcctcg gccaggatga
//
LOCUS       DATLMA010000470         1268 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_526743, whole genome shotgun sequence.
ACCESSION   DATLMA010000470 DATLMA010000000
VERSION     DATLMA010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526743"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="VNA10_06010"
     CDS             complement(<1..561)
                     /locus_tag="VNA10_06010"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37269.1"
                     /translation="MVVRDIRARYAGSGLGIAWVFLQPVLWMVLYTAVFSVILRVPVE
                     HGFASFPEFLMAGLLPWMAIQEGISRSASALPDNAVMVKKAVFPIETLVGSVVVAAVV
                     NQLIAFAVFAVYLLWVGHLSAWILLAVPALAVQILLTYGIGCLAATITVFVRDAGHAI
                     GILLSVVFFATPIVYPPSMVPARFRPI"
     gene            673..1053
                     /locus_tag="VNA10_06015"
     CDS             673..1053
                     /locus_tag="VNA10_06015"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HVG37270.1"
                     /translation="MAPHPSPRKVHLVGSRIRELRKGHRLTQTELSDKIGIAQSDLSR
                     MEQGEYKVGLDTLFKLLQVFDLKIGEFFGESETAGPEDRELVTGYRGLSEEARQEVRD
                     FVRFKKMQEESRTDSDSPSREEKE"
BASE COUNT          285 a          389 c          407 g          187 t
ORIGIN      
        1 gatcgggcgg aacctcgcag ggaccatcga aggcgggtag acgatcggcg tcgcgaagaa
       61 gacgaccgag agcagaattc caatcgcgtg acccgcgtcg cgcacgaaga ccgtgatcgt
      121 cgcggccagg cagccgatcc cgtacgtcag gaggatctgg acggcgagcg ccggcacggc
      181 gagcaggatc caggccgaga ggtgcccgac ccatagcagg tacacggcga agacggcgaa
      241 cgcgatcaac tggttcacga ccgcggcgac gacgaccgag ccgacgagag tctcgatcgg
      301 gaagacggcc tttttcacca tgaccgcgtt gtccgggagc gccgaggccg agcgcgaaat
      361 tccttcctgg atcgccatcc acgggaggag tcccgccatc aggaattcgg ggaagctcgc
      421 gaaaccgtgc tcgaccggga cccgcaggat gaccgagaag acggccgtgt aaagaaccat
      481 ccagaggacc ggctggagaa agacccaagc gatgccgagc ccggaaccgg cgtaccgggc
      541 gcggatatcc cggacgacca tctccttgag caggaaaagc ttggcggaaa gtcggcggtt
      601 gtctcttgac attcttcgca gaggggcgat tatagtgacg cgcttttatg gcgcaacagc
      661 atcccggaaa atatggcgcc ccacccgtct ccccgcaagg ttcacctcgt cggctcgcga
      721 atccgcgagc tgcgcaaagg gcatcgcctc acgcagacag agctctccga caagatcggg
      781 atcgcgcagt cggacctctc ccgaatggag cagggcgagt acaaggtcgg gctcgacacg
      841 ctcttcaagc tgctccaggt cttcgatctg aagatcggcg agttcttcgg ggaaagcgag
      901 accgcgggtc ccgaagaccg ggagctcgtc acgggatatc gcggtctttc cgaagaagcg
      961 cggcaggaag tccgcgattt cgtccggttc aagaagatgc aggaagagtc ccgtacagac
     1021 tccgacagcc cttcccggga agaaaaagag tgagatcgcc cgctccgggt ttagaatcgc
     1081 tccagtctcc gcaaccacac aggtgggaat gaccgagcga cgcaaacatc tggagtttct
     1141 gcgaaagacc gcccgggacg cgatctgggc cggagactac gaccgtgccc tgtcgctcta
     1201 cgaggacggc ctcgcgctcg cgcgctcttg gaaagaccgg gacctcgagg atctcttcac
     1261 ctgcaacc
//
LOCUS       DATLMA010000471         1359 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_167747, whole genome shotgun sequence.
ACCESSION   DATLMA010000471 DATLMA010000000
VERSION     DATLMA010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167747"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..268)
                     /locus_tag="VNA10_06020"
                     /pseudo
     CDS             complement(1..268)
                     /locus_tag="VNA10_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004495882.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0061810 - NAD glycohydrolase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
     gene            345..743
                     /locus_tag="VNA10_06025"
     CDS             345..743
                     /locus_tag="VNA10_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37271.1"
                     /translation="MMKLSRNVSALAVALVVNVLLVILLTPLGFETRPSADLKTVGYI
                     AIGTIFAGLILDVASFALLFRRVRLASSLAIVGSILLFFPIFGDQTGSFFSLPIPPVV
                     HTLEYIFIPVLLVTLFLASKVYRDSRPSPS"
     gene            1084..>1359
                     /locus_tag="VNA10_06030"
     CDS             1084..>1359
                     /locus_tag="VNA10_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37272.1"
                     /translation="MPIRSLGTVVSSASFPGTDGRETARHAAPLPRLLAQEHPAVVVA
                     ASERAHRDPADLGDRRALEEIILGHRREASGASAAAIRLAPQRPRSSG"
BASE COUNT          232 a          435 c          407 g          285 t
ORIGIN      
        1 gttcgtggac gcgacggacc tcttcgaaag acgcgccgac gttcccgttg gggaagggga
       61 tctgcccgag tcctgcgatg ttcgaaaact cctcgcagcc atcttccctg agcacgatcg
      121 ccttgcgcca cccgagccgg ccctggaaca ggcccgcctc atggacgacg ttctggcgcg
      181 ccagcaccac gccgtcggtg cgctcggact ccgcggtcag gacgagaagc gcgaatccag
      241 cctcgtcgag catctgctcc agtcgctcgg tgttggggac gctgcagact gctgcactgt
      301 cgcgctgggg gccggtgtaa gccacaggat gttacggtcc ccgggtgatg aaactctcca
      361 gaaacgtatc ggcgcttgcc gtagcgttgg tggtgaacgt cctgctagtt atcctgttga
      421 ctccactcgg ctttgagacc cgtccatcag ccgatttgaa gaccgttggc tacatagcga
      481 tcggtaccat ttttgcgggt ctcatcctgg acgtggcgtc attcgccctc ctcttcagga
      541 gagtcagatt ggcttcgagt ctggcgattg tcggctcgat cctcttgttc tttcccattt
      601 tcggagacca aactgggtcc ttcttctcgc tgcctatccc gcctgtagtt cacaccctcg
      661 aatacatctt cattcccgtt ctactggtaa ctctcttcct ggcctcgaag gtgtacagag
      721 atagtcgtcc ctctccaagt tgacgaattc tcggacgtcc accccgcagg ccgacgagga
      781 gcacgtcgtg tgtgggcatc accccgagat cgagctcggg atctgttcga taaggaccaa
      841 agctaggatt gagcagcgga ggggtggcag agtggacgaa tgcggtggtc ttgaaaccgc
      901 cccagtcttg aatccgccca gttagggaga agagggcgga tcagcctctc aactccctga
      961 ctcgcgaagg cgtctgactc ctttgactgc gtgactcggg atccaagtaa ttcggcctac
     1021 caccgcatga aatccggaca tcacgggcgg cggactgtag atcatccgcc ctttcagcca
     1081 ggggtgccga ttcgctcgct cgggacggtc gtgtcgtccg catccttccc cgggacggat
     1141 ggacgcgaaa ccgcgagaca cgctgctcct cttccgcggc tgctcgcgca ggagcatccg
     1201 gctgtagtcg tcgccgccag cgagcgcgcg catcgcgatc ccgcggatct cggcgaccga
     1261 cgagccctcg aggagatcat tctcggtcat cggcgggagg ctagcggcgc gtccgccgcg
     1321 gcgatccgtc tcgcgcccca gcgcccgcgg agctctggg
//
LOCUS       DATLMA010000472         1115 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_587254, whole genome shotgun sequence.
ACCESSION   DATLMA010000472 DATLMA010000000
VERSION     DATLMA010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587254"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..1057
                     /gene="gap"
                     /locus_tag="VNA10_06035"
     CDS             23..1057
                     /gene="gap"
                     /locus_tag="VNA10_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012871735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HVG37273.1"
                     /translation="MKARVAINGFGRIGRQFLKASLERHPEVEIVALNDLADPKMNAH
                     LFKHDSNYGNYQGEVSATADSLIVDGRRIKVLQERDPAKLPWKQLEVDIVVESTGFFT
                     DATKAKAHIEAGAKYVIISAPAKNEDKTIVLGVNEKDFDPEKHHIISNASCTTNGLAP
                     VAKVLNDEFGIEKGFLTTIHSKTLSQRLLDTVANDPRDARAASENIVPAETGAARAVT
                     LVIPELKGRFTGMAFRVPTPTVSVVDFTATLKREVTKEEVNAAFKRASEGSLKGIMDY
                     TEEPLVSSDLKGDAHSTIVSALDTIVLGNMVKIISWYDNEWGYACRLADITSFVAKKL
                     KTKQPVAATA"
BASE COUNT          234 a          370 c          337 g          174 t
ORIGIN      
        1 gatcgatctg gggaggcatc acatgaaagc tcgtgtcgcg atcaatggtt tcggtcggat
       61 cggccgtcag ttcctcaaag cctcgctcga gaggcatccc gaggtcgaga tcgtcgcgtt
      121 gaacgacctc gccgacccga agatgaacgc gcacctcttc aagcacgatt ccaactacgg
      181 caactaccag ggcgaggtct ccgccaccgc ggactctctc atcgtcgacg ggcgcaggat
      241 caaggtcctc caggagcgcg acccggcgaa gctcccgtgg aagcagctcg aagtcgacat
      301 cgtcgtcgag tcgaccggct tcttcaccga cgcgacgaag gcgaaggccc acatcgaggc
      361 cggcgccaag tacgtgatca tatccgcgcc cgccaaaaac gaggacaaga cgatcgtgct
      421 cggggtgaac gagaaggatt tcgatccgga gaagcaccac atcatctcga acgcctcctg
      481 cacgacgaac ggcctcgctc cggtcgcgaa ggtgctgaac gacgagttcg gcatcgagaa
      541 gggcttcctc acgacgatcc actccaagac gctgagccag cggttgctcg acaccgtcgc
      601 gaacgatcca cgcgatgcgc gggccgcgtc ggagaacatc gttcccgcgg agaccggcgc
      661 cgcgcgcgcc gtcacgctcg tcattcccga actcaaggga cggttcacgg gcatggcctt
      721 ccgcgttccg acgccgacgg tctcggtcgt cgacttcacc gcgacgctca agcgcgaggt
      781 caccaaggaa gaggtgaacg ccgcgttcaa gcgcgcgtcc gaaggttcgc tcaaggggat
      841 catggattac accgaggagc cgctcgtctc gagcgatctc aagggcgacg cgcattccac
      901 gatcgtcagc gcgctggaca cgatcgtcct cggcaacatg gtcaagatca tttcttggta
      961 cgacaacgag tggggctacg cgtgccgcct cgccgacatc acctcattcg tcgcgaagaa
     1021 gctcaagacc aagcagcccg tcgccgcgac cgcctgagcc cgttggccaa gcgcacgatc
     1081 gcggccctcg acgcgaaggg gaagcgcgtc ctcgt
//
LOCUS       DATLMA010000473         1858 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_587264, whole genome shotgun sequence.
ACCESSION   DATLMA010000473 DATLMA010000000
VERSION     DATLMA010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587264"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..800
                     /gene="rpe"
                     /locus_tag="VNA10_06040"
     CDS             120..800
                     /gene="rpe"
                     /locus_tag="VNA10_06040"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HVG37274.1"
                     /translation="MAVKIAPSILSARFDRLGDQVREAAEAGADMLHIDVMDGHFVPN
                     LTMGPAIVKSIRPLTRVPFDAHLMVTHPQEFVKPFADAGVDDLTIHVESDDDVRATIR
                     AIRDAGIRSGVVLNPATPFEKAVPYLREADMLLIMTVHPGFSGQAFRADVVPKIREAR
                     RYIDREGLATEIQVDGGIKVDTAPIVAEAGADILVSGSGIFPDRIRENLMALRRAAEK
                     GRAGSKRV"
     gene            873..1031
                     /locus_tag="VNA10_06045"
     CDS             873..1031
                     /locus_tag="VNA10_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37275.1"
                     /translation="MVRLGFVIGTLLPVALLAANLITGYGGVLVTIGLLVWLATGVLL
                     TPTAEDEA"
     gene            complement(1028..1429)
                     /locus_tag="VNA10_06050"
     CDS             complement(1028..1429)
                     /locus_tag="VNA10_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37276.1"
                     /translation="MAARRGRSLVGMAVVDGDGVEVGYVSGEEANTLVLGEGSGGRMR
                     LGRRYVSGVVDRVTLRGPAAEIFAGLNVVDSDGEFVGIVRDTNEAEDVLDSFIVEDES
                     GEMVNVLLEDVRSIDEWLELSVAGDSLYEKS"
     gene            1643..>1858
                     /locus_tag="VNA10_06055"
     CDS             1643..>1858
                     /locus_tag="VNA10_06055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37277.1"
                     /translation="MARCPLCESDVPDGRSACDICGQPFNRGLTARAAPDITKRALAA
                     ARKDLVASNRDRTDPSFARSLLERAEQT"
BASE COUNT          323 a          656 c          578 g          301 t
ORIGIN      
        1 cgtcgccgaa ctcgcgtcgt tccaccgatc gtagacgcct accgtaaccc gttccttccc
       61 cgcggcgttc gccgcgaggg agggaaatct tattccacgc gcgttcattg cgcagccgga
      121 tggccgtcaa gattgctccc tcaatccttt ccgcgcggtt cgaccgcttg ggagaccagg
      181 tgcgcgaagc cgcggaagcc ggcgcggaca tgctccacat cgacgtgatg gatggccatt
      241 tcgtccccaa cctgacgatg gggccggcca tcgtgaagtc gatccggcca ttgacccggg
      301 tcccgttcga cgcccatctg atggtgacgc atccgcagga attcgtgaag cccttcgcgg
      361 atgccggagt ggacgatctc acgatccacg tcgagagcga cgatgatgtc cgcgcgacga
      421 ttcgggcgat ccgcgacgcc ggaatccgtt cgggggtcgt cctcaatccc gcgaccccgt
      481 tcgagaaagc ggtcccctac ctccgggagg ctgacatgct cctcatcatg acggtccacc
      541 ccggattctc ggggcaagcc tttcgagcgg acgtcgtgcc gaagatccgc gaggcccgac
      601 ggtacatcga cagggagggc ctggcgaccg agatccaggt ggatggcggc atcaaggtcg
      661 acaccgcccc gatcgtcgcc gaggcgggcg ccgacatcct ggtctcaggg agcggcatct
      721 tcccggaccg gatccgcgag aacttgatgg ccctccgccg cgcggcggag aaaggccgcg
      781 cgggttcgaa gcgcgtctag gacacaattc gtctcgccgc cgatccgagg ctcgcaaacc
      841 tttaggagca agagggcatc gaggcgcttg cgatggtccg tctcggattc gtgatcggga
      901 cactgctgcc cgtggcgctc ctggcggcaa acctcatcac gggctacgga ggcgtcctgg
      961 tcacgatcgg cctgctcgtg tggctcgcga ccggcgtcct gctcacgccg acggcggagg
     1021 acgaggccta actcttctcg tagagggaat cgcccgcgac ggacagctcg agccactcgt
     1081 cgatcgaccg cacatcctcg aggaggacgt tcaccatctc gccggactca tcctcgacga
     1141 tgaacgaatc gaggacatcc tccgcctcgt tcgtgtcgcg cacgatgccc acgaactccc
     1201 cgtccgaatc gacgacgttc aagcccgcga agatctccgc tgcgggaccg cgcagggtca
     1261 cgcggtccac gaccccgctc acgtaccgac ggccgaggcg catccggccc ccggagcctt
     1321 cgccgaggac cagcgtgttc gcctcttccc cggagacgta gccgacctcg acgccatcgc
     1381 catcgacgac tgccatgccg acgagcgacc gaccccgccg cgccgccaaa ctgatacctc
     1441 cgagtgcgcc cttcgcggga ccgcccgacg tcgtccgaac accgcgcggc tactgaagct
     1501 tttcgggaac gggcgcggaa ccgctccaag ccatacggtt atcaggtgag atatcgagga
     1561 cgcttctttt atactggctg acccgacatc caacggtgtc aatccctccg ggtgcggagg
     1621 gcgacccctc ggttggagcc acatggcccg ctgccccctc tgcgagtcgg acgtaccgga
     1681 cggtcgatcc gcctgcgaca tctgcgggca gccgttcaat cgcggcttga ccgcgcgggc
     1741 ggcccccgac atcacgaaac gcgcgctcgc ggcggcgcgg aaagacctcg tggcctcgaa
     1801 tcgcgatcgg accgacccgt cgttcgcgcg gagcctcctc gagcgagccg agcaaacg
//
LOCUS       DATLMA010000474         2972 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_105577, whole genome shotgun sequence.
ACCESSION   DATLMA010000474 DATLMA010000000
VERSION     DATLMA010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105577"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VNA10_06060"
     CDS             complement(<1..538)
                     /locus_tag="VNA10_06060"
                     /inference="COORDINATES: protein motif:HMM:NF012320.4"
                     /note="GTPase; similar structure to tubulin; forms
                     ring-shaped polymers at the site of cell division; other
                     proteins such as FtsA, ZipA, and ZapA, interact with and
                     regulate FtsZ function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HVG37278.1"
                     /translation="MVPRDYVEEVISSLFEDAVDPKISVVGVGGAGGKMVSALYDRDI
                     KGVETIAVNTDPSGLSKAECDVKILLSQPADGDRIAGARASAEDQEGSLRESLSSDIV
                     FVVAGLGGAAGTGAAPVVARAARANGAVTIGVAILPFEIEGRTEAARQGLEEFRREAD
                     SVIVVENDSLNRFADQMSF"
     gene            complement(701..1081)
                     /locus_tag="VNA10_06065"
     CDS             complement(701..1081)
                     /locus_tag="VNA10_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HVG37279.1"
                     /translation="MDENERITLRLEKENLELIDAFLKGSTSHGNRSQLVRDAVQAYI
                     QTIREGGDTVKIRIPRYYLELIDRLVADGYFLSREHAVVRSIEEWFTRDRVKEIEDHR
                     KQVDKMTGKVVSVSTGDNEGVIPP"
     gene            1283..>2972
                     /locus_tag="VNA10_06070"
     CDS             1283..>2972
                     /locus_tag="VNA10_06070"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HVG37280.1"
                     /translation="MEAASRRRRTRSSGPSIPPRKALRESLLCARVAKKLRRAGGRRK
                     TPQTRRPAKRSRRPRPRAEPKARRSLPRRGKARAHPRPRTAAKPRRGGGPVDLRRIEA
                     KWQSAWEREHVYVARAEVGRPKWYSTVPYPYMNGYQHLGFGTSFLRAEFQSRFRRMLG
                     YNVLHPQAFHCTGLPILGAAKRIAEKEPKQWEILRAMGIPDREIPKFADPMHWIEVFP
                     AATMDDLKALGAAVDWTRSFITTPLNPPYDAFVRWQFHRLKDGGYVRIDKHPVIWCPM
                     DQAPIGDHDRLEGEGETPTEYTLLKFPLADGRLLVAATIRPETVFGQTNLWIDPDAEY
                     VVARVGDERWILNDLASKKLSEQGKSVAIESRIHGADLLGKDVVAPAINRAIPILPGS
                     FIDQGRGTGIVTSVPSDAPDDYVALRDLQQDEALLDKYDLDPERIRAIQPISIIRTPG
                     WGPLPGVEIVDRLGIRNQQDREKLEQAKAEVYKTGFYRGVLNENCGPYAGVRVEVAKD
                     EIRKELTSKGQADMMYEPSGLVICRCLTPAIVKVVDNQWFLSYADPAWKAKVHEA"
BASE COUNT          524 a          988 c          923 g          537 t
ORIGIN      
        1 tgaaggacat ctggtcggcg aatcggttca gtgaatcgtt ctccacgacg atcacgctgt
       61 ccgcttcgcg acggaattcc tcgagccctt gccgggcggc ttccgtccga ccttcgatct
      121 cgaacggcag gatcgcgacg ccgatcgtga cggccccgtt cgcccgcgca gctcgtgcga
      181 cgaccggcgc ggcccccgtc cccgcggcgc ctccgaggcc cgcgacgacg aagacgatgt
      241 ccgaggagag cgattcccgg agggatcctt cctggtcctc cgcggacgcc cgtgctccgg
      301 cgatccggtc cccgtctgcc ggctggctga gcaggatctt cacgtcgcat tcggccttcg
      361 agagcccgga gggatccgtg ttcaccgcga tcgtctcgac gcccttgatg tcgcggtcgt
      421 agagcgcgct caccatcttg ccaccggcgc ccccgactcc gacgacggag atcttcgggt
      481 ccacggcatc ctcaaacagg ctgctgatga cttcctcgac gtaatccctg ggtaccattg
      541 cgtccggcct ccaatcattc cgctaccgat cgagggaggc cggaaggcag ttcactccac
      601 tgaaggcgtg catcccatcc cttcatgaca ggttcccatc cgttcccttt ttctgtcgtt
      661 cggggtgact cccttccggc atccgccacg cctcggcggt tcatggcggg atgactcctt
      721 cgttgtcgcc cgtcgatacg gagacgacct tgccggtcat cttgtcgact tgcttccggt
      781 ggtcttcgat ctccttcacc cggtcccgcg tgaaccactc ctcgatgctc cggacgaccg
      841 cgtgctcccg actcaggaag tagccgtccg ccacgaggcg gtcgatcagt tcgaggtagt
      901 accgcgggat gcggatcttg accgtgtcgc cgccctcgcg gatcgtctgg atatacgcct
      961 ggaccgcgtc ccggaccagt tgcgagcggt tcccatgcga cgtgctccct ttcaggaacg
     1021 catcgatcag ctcgaggttt tctttctcga gccgcagggt gatccgctcg ttttcgtcca
     1081 tccgaatccc tcgcctgaac aacgggaaca ggtatgacga ggtcatacac cattcctcgc
     1141 aatttcggcg tgttatccgc ggtatcctga agcacggtac atatacttgt tgtcaattgt
     1201 catacgacgt aggacaaagg gtctccatcg cggcacggaa tcgtgcctgg aatgaccgct
     1261 cgatttttat ttggtatgcc aaatggaagc tgcctctcgt cgccgacgaa cgaggtcgag
     1321 cggcccttcc attcctccgc gaaaagcttt acgagaatcg ctcctatgtg cgcgcgtggc
     1381 caagaagttg cgtcgagccg gcggtcggcg gaaaacgccc caaacccgcc gccctgctaa
     1441 gcgcagccgt cgtcctcgac cgcgggccga gccgaaggcc cgtcgatctc tcccccggcg
     1501 cgggaaagcg agggctcatc ctcgcccccg cacagcggcg aagcctcggc gcggcggagg
     1561 accggtcgac ctgcggcgga tcgaggccaa gtggcaatcc gcgtgggagc gcgaacatgt
     1621 atacgtcgcg cgcgcggagg tcggtcggcc gaagtggtac tccaccgtgc cgtacccgta
     1681 catgaacggg taccagcacc tcggcttcgg aacgtcgttc ctgcgggccg agttccagtc
     1741 tcgattccgg cggatgctgg gttacaacgt cctgcacccg caggcgttcc attgcaccgg
     1801 cctgcctatc ctgggagcgg cgaagcggat cgcggagaaa gagccgaagc agtgggagat
     1861 cctccgggcg atgggcatcc ccgaccgcga gatcccgaaa ttcgcggatc cgatgcattg
     1921 gatcgaggtc ttccccgccg cgaccatgga cgacctgaag gcgctcggcg cggccgtcga
     1981 ctggacgcgt tccttcatca cgacgccgct caacccgccc tacgacgcat tcgtgcgctg
     2041 gcagttccac cgcctcaagg acggcggcta cgtgcgtatc gacaagcacc cggtcatctg
     2101 gtgcccgatg gaccaggcgc cgatcggcga ccacgatcgc ctcgaaggcg aaggcgagac
     2161 gccgacggaa tacacgctgt tgaagttccc cttggccgac ggccggctcc tcgtcgccgc
     2221 aacgattcgg cccgagaccg tgtttgggca gacgaacctc tggatcgatc cggacgcgga
     2281 atacgtggtc gcgcgggtcg gcgacgagcg gtggatcctc aacgacctcg cgtcgaagaa
     2341 gctctcggag caggggaagt cggtcgcgat cgagtcgagg atccatggag ccgatctgct
     2401 cggcaaggat gtggtggccc ccgcgatcaa ccgggcgatt ccgattctgc ccggctcctt
     2461 catcgaccag ggccgcggca ccgggatcgt gacgagcgtg ccgtcggacg caccggacga
     2521 ttacgtggcc ctgcgggacc tgcaacaaga cgaggctctc ctagacaagt acgatctgga
     2581 cccggagcgg atccgggcca tccagccgat ctccatcatc cgcacgcccg gatgggggcc
     2641 attgccgggc gtcgagatcg tcgatcgcct cgggatccgg aaccaacagg accgcgagaa
     2701 actcgagcag gcgaaggcgg aagtgtacaa gaccggcttc taccgcggcg tcctgaacga
     2761 gaactgtggc ccctacgccg gcgttcgggt ggaagtcgcc aaagacgaga tccggaagga
     2821 gctgacgtcg aaaggccagg ccgacatgat gtacgagccg agcggcctcg tcatctgtcg
     2881 gtgcctgacg cccgcgatcg tgaaggtcgt ggacaaccaa tggttcctct cgtacgccga
     2941 tccggcgtgg aaggcgaagg tccacgaagc ga
//
LOCUS       DATLMA010000475         1343 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_887253, whole genome shotgun sequence.
ACCESSION   DATLMA010000475 DATLMA010000000
VERSION     DATLMA010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887253"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..387)
                     /locus_tag="VNA10_06075"
     CDS             complement(82..387)
                     /locus_tag="VNA10_06075"
                     /inference="COORDINATES: protein motif:HMM:NF024637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HVG37281.1"
                     /translation="MNVRRVVIGTLFTIAGLVSLMIPALPFICIGALIFGPIELAIGL
                     LGNGRPRPAYAPATQYALPPLVDATREVARTTQRCGSCGTAVDAGMKFCPNCGTPFA"
     gene            581..>1343
                     /locus_tag="VNA10_06080"
     CDS             581..>1343
                     /locus_tag="VNA10_06080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37282.1"
                     /translation="MPLRFWKKEKPEKGKPEKEAEEPKEQKERPAAKPAPAETAVKPE
                     PSATKSEEKPAPPPTPPKPGEVEVFVNEAHAGLVDLGLTVAPTKAVFAKRVAAYPGGP
                     TAFVAEYRAAPYKAVTRVLADWLGFRVPETFELDAILKEVNPRLSSFKLTLAAKDPTW
                     LDKELNLRKARLIVGEQEKVVRFKDARDFLKGVNELLAGRKLAFLELETWADDFAFLL
                     VRDPRWDKLKNPELVVIKADQTATGGECGECGAPVG"
BASE COUNT          260 a          416 c          460 g          207 t
ORIGIN      
        1 agccgcgggg gctaggcggc gcagatactt agccgcgtcg atgcacgtcg gtttgagtca
       61 tgctcggtct tccaccggag ctcaggcgaa cggagtgccg cagttcgggc agaacttcat
      121 cccggcatcg accgctgtgc cgcacgaacc gcaccgctgc gtggttcggg ccacctctcg
      181 tgtcgcatca accagtggcg gaagggcgta ctgtgtcgcc ggggcgtacg ccgggcgggg
      241 gcgcccattc ccgaggagtc cgattgccag ctcgatcggt ccgaagatca aggcgccgat
      301 gcaaatgaat gggagcgccg ggatcatgag gctcacgagc cccgcaatgg tgaacaatgt
      361 accgatcacg acccggcgca cattcacgcg ctccctccga ggctggaatg gtcgtgggtg
      421 aagatagact ctttcccgcg ctgccggtcc gttgaccgcg cgtttccgca aagatgctcg
      481 acgtccggag gagggcggtg agaagtcctg gtctcattgt gttgtccctc aaaactggca
      541 gcacaactct tattacgagc gacccgggtt tccgcggtcg atgcccctcc gattctggaa
      601 gaaagagaag cctgagaagg gcaagccaga aaaggaagcg gaggagccga aggaacagaa
      661 ggagaggccc gcggccaaac cggcgccggc ggagacggcc gtgaaaccgg aaccttcggc
      721 aacgaagtcc gaggaaaagc ccgccccacc gcccactccg ccgaagccgg gcgaggtcga
      781 ggtgttcgtg aacgaggccc acgccgggct ggtcgacctc gggctcacgg tcgcgccgac
      841 gaaggccgtg ttcgcgaagc gcgtggccgc ttacccgggc ggcccgacgg cgtttgtcgc
      901 cgagtaccgc gccgcgccgt acaaggcggt gacccgcgtc ctcgcggatt ggctcggctt
      961 ccgcgtgccg gagacgttcg agctcgatgc gatcctcaaa gaggtcaacc cgcgactcag
     1021 ttcgttcaag ttgacgctcg ccgcgaagga tccgacctgg ctggacaagg agctgaacct
     1081 gcggaaggcg aggctgatcg tcggggagca ggagaaggtc gtccggttca aggacgcgcg
     1141 cgacttcctg aagggcgtca acgaactcct cgcaggccgg aagttggcat tcctcgaact
     1201 cgagacctgg gccgacgact tcgcgttcct cctcgtccgc gacccacggt gggacaagct
     1261 gaagaatccg gaactcgtcg tcatcaaggc ggaccagacg gcgaccggag gcgagtgcgg
     1321 ggagtgcggt gcaccggtcg gca
//
LOCUS       DATLMA010000476         1612 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_411411, whole genome shotgun sequence.
ACCESSION   DATLMA010000476 DATLMA010000000
VERSION     DATLMA010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411411"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VNA10_06085"
     CDS             <1..660
                     /locus_tag="VNA10_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37283.1"
                     /translation="GDFNPEGGTTCGRAQPEFVRDLIVDATYGRPGYNFPPKHDVESD
                     LLNWLEMELARGPVALGGYEFGKSQELIALVNRLGVEVAVSDKIADLADLYGAYGIKL
                     EYRRLSELAENERNDPRVYVLPPGWLRPPLEDSVSWLGSVGLKAAYVSGWCAFFDYTG
                     RYGLDAQFPLSDHGDFEDVMTFIEACRPRKVYTAFSGAKDLAKAVERRLKIRSEALLT
                     R"
     gene            666..1085
                     /locus_tag="VNA10_06090"
     CDS             666..1085
                     /locus_tag="VNA10_06090"
                     /inference="COORDINATES: protein motif:HMM:NF015444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF296 domain-containing protein"
                     /protein_id="HVG37284.1"
                     /translation="METQQEGNAVVVKLSDGDDLFPSLEAAARKHQIESGSVLWGIGM
                     LQDFEIGYFGPNGYEKTVFADRHELLALHGSIAMRAEPKLHLHTALGRRDHGAIGGHL
                     FRAKTAVVNEIQLARFDSIRFNRRFNEKTGMRELVLD"
     gene            complement(1098..1301)
                     /locus_tag="VNA10_06095"
     CDS             complement(1098..1301)
                     /locus_tag="VNA10_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37285.1"
                     /translation="MPTDEVCGVQGCGKEAKRSLSTKKVKEVLPELKLIGEPRRVHLC
                     KDHYKQFRKKTKQERELDRAAWQ"
     gene            complement(1350..>1612)
                     /locus_tag="VNA10_06100"
     CDS             complement(1350..>1612)
                     /locus_tag="VNA10_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37286.1"
                     /translation="NRSDDTLTLFYTFDSVARNASYTLLPLPGTVVAVYLPSLAAVSI
                     DIVSLPPAAPAPAFDSGSEAAVIAALAIVSVAAAWMLRRKPT"
BASE COUNT          283 a          507 c          555 g          267 t
ORIGIN      
        1 ggcgacttca accccgaggg agggacgacc tgcggccgcg cccaaccgga gttcgtccgc
       61 gacctgatcg tcgacgcgac gtacggacgg cccgggtaca actttcctcc gaagcacgac
      121 gtcgagtcgg acctcctcaa ctggctggag atggaactcg ctcgaggccc cgtggccctc
      181 ggcgggtacg agttcggcaa gagtcaggag ctgatcgcgc tcgtgaaccg actcggcgtg
      241 gaggtcgcgg tctccgacaa gatcgcggac ctcgcggatc tctacggcgc gtacgggatc
      301 aagctggagt accggcggct ctcggagctc gcggagaatg agcggaacga tccacgggtc
      361 tacgtgttgc cgcccggatg gctacggccg ccgctcgagg acagcgtctc gtggctcggc
      421 tcggtcggcc tcaaggcggc gtatgtgagc ggatggtgcg ccttcttcga ttacacgggg
      481 cggtacggcc tcgacgcgca gttccccctg agcgaccacg gggacttcga ggacgtcatg
      541 acgttcatcg aggcgtgccg cccgcggaag gtgtacaccg cgttcagcgg cgcgaaagac
      601 ctggcaaagg ccgtggagcg acgactgaag atccgatccg aagcgctcct cacccggtga
      661 gctggatgga gacgcagcag gaaggcaacg cggtcgtcgt gaagctctcc gacggcgacg
      721 acctcttccc gagcctcgaa gcggccgccc ggaagcacca gatcgagagc ggctcggtcc
      781 tctgggggat cggaatgctc caggacttcg agatcgggta ctttgggccg aatggctacg
      841 agaagaccgt cttcgcggac cgtcacgagc tcctcgcgct ccacgggagc atcgcgatgc
      901 gggccgaacc gaagctccat ctccacaccg cgctcggacg acgggaccac ggtgcgatcg
      961 gcggccatct gttccgcgcg aagaccgcgg tggtcaacga gatccaactc gcgcggttcg
     1021 attcgatccg cttcaatcgc aggttcaatg agaagaccgg gatgcgcgaa ctggtcctcg
     1081 attgaggcga ccgcgggcta ctgccacgcc gcgcgatcga gctcccgttc ttgtttcgtc
     1141 ttcttccgga actgcttgta gtgatctttg cagaggtgga cgcgtctcgg ttcgccgatc
     1201 agcttgagct cggggaggac ctctttcact ttcttcgtcg agagggaccg cttcgcctcc
     1261 ttcccgcaac cctggacccc gcagacctcg tccgtgggca tgggagcggc gatgccgggg
     1321 cggatatttg tacgtgcgcg gtccgcatgc tatgtcggct tgcggcgcag catccacgcc
     1381 gccgccacag agacgatggc gagggccgcg atcacggccg cctcggatcc cgaatcgaac
     1441 gccggagcgg gcgccgcggg cgggaggctg acgatgtcga tcgagaccgc cgcgagggag
     1501 ggcaggtaga cggcgacgac ggtgcccggg agcgggagga gcgtgtacga tgcgttccgc
     1561 gccaccgaat cgaacgtgta aaacagggtg agcgtgtcgt ccgatcgatt ca
//
LOCUS       DATLMA010000477         1428 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_526918, whole genome shotgun sequence.
ACCESSION   DATLMA010000477 DATLMA010000000
VERSION     DATLMA010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526918"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1190)
                     /locus_tag="VNA10_06105"
     CDS             complement(<1..1190)
                     /locus_tag="VNA10_06105"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HVG37287.1"
                     /translation="MSFRRRISGFVLVLAVARPLGAQKIPVAEKTLSNGMHLLVVHRE
                     GEATVAGGWVAHVGSSNERPGITGISHLFEHMMFKGTPTIGTKDYRKDVVIIAEQEQV
                     RDEMRQEEAKMRAAYRRGEIDDLLKPENKTPRYRELETKFDELIKKQREVLVKNEFDR
                     IYTTGGGSGMNAFTNEDMTGYFITVPSNKLELWMWMESDRLFHPVFREFYAERDVVFE
                     ERRLRTEATPLGKFEESFESLFWESHPYGWPVVGWPSDIPAITKAQADAYYGTYYAPQ
                     NITLILVGDVDAEKTARMAERYFGRIPRGRTAVPDVVTLEVPQQAEKRMYAEAEANPQ
                     VDILWHTVPFGHVDSYPLQVLAQILSTRTGRLYKGLVLGSGVATDAFARQESRKWAGL
                     FNAGG"
BASE COUNT          235 a          480 c          442 g          271 t
ORIGIN      
        1 ccgcccgcat tgaacagccc ggcccacttg cgcgactcct gccgcgcgaa ggcgtcggtc
       61 gcgacgcccg atccgagcac gagtcccttg tacaggcggc cggttcgcgt cgagaggatc
      121 tgcgcgagca cctggagcgg ataggaatcg acgtggccga acgggaccgt gtgccagagg
      181 atgtcgacct gcgggttcgc ttccgcttcg gcgtacatcc gtttctcagc ctgttgcggg
      241 acctcgagcg tcacgacgtc gggaaccgcc gtcctgccgc gcggaatgcg gccgaagtac
      301 ctctccgcca tccgtgcggt cttttccgca tcgacgtcgc cgacgaggat caacgtgatg
      361 ttctgcggcg cgtaataggt cccgtagtac gcgtcggcct gcgccttcgt gatcgccggg
      421 atgtccgagg gccagccgac gaccggccag ccgtacgggt gcgactccca gaacagcgac
      481 tcgaagctct cctcaaactt cccgagcggg gtcgcctccg tgcgcaggcg ccgctcctcg
      541 aaaacgacgt cgcgctccgc gtagaactcg cggaaaacgg ggtgaaagag acggtccgac
      601 tccatccaca tccagagctc gagcttgttc gaagggacgg tgatgaagta gccggtcatg
      661 tcctcgttgg tgaaagcgtt catccccgac ccgccgccgg tggtgtagat ccggtcgaac
      721 tcgttcttga cgagcacctc ccgctgtttt ttgatcagct cgtcgaattt cgtttcgagc
      781 tcccgatatc gcggcgtctt gttctccggc ttgagcaagt cgtcgatctc gccgcgccga
      841 taggcggctc gcatcttcgc ttcctcctgc cgcatctcgt cgcggacctg ctcctgctcc
      901 gcgatgatca ccacgtcctt ccggtagtcc ttcgtgccga tcgtcggagt acccttgaac
      961 atcatgtgct cgaagaggtg ggagatcccc gtgatgcccg gccgttcgtt ggagctcccg
     1021 acgtgggcaa cccagcctcc cgcgaccgtc gcctccccct cgcggtgaac gaccagaagg
     1081 tgcatcccgt tggaaagcgt tttctcggcg accgggatct tctgggcccc gagcggtcga
     1141 gcgaccgcga ggacgagaac gaatcccgaa attcgacggc ggaagctcat tcgcggtcct
     1201 ttcccgatgt ctccccgcgc gcatcgacgc acgggaatgc actttgcagg gccgtattgt
     1261 ctatcatcgg aaacacgaag gaggaatgat gaagacgacg agaatctcaa tcctcgcggc
     1321 tgctttcgct gtggccgcgg cagccgccct gctcacggcg gcctgcaagt ccgcgtcgac
     1381 tgcgtcgccg gccgcggcgg cgcgaccgca ggcgcgcgcg acgatcga
//
LOCUS       DATLMA010000478         2568 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_411449, whole genome shotgun sequence.
ACCESSION   DATLMA010000478 DATLMA010000000
VERSION     DATLMA010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411449"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..751)
                     /locus_tag="VNA10_06110"
     CDS             complement(<1..751)
                     /locus_tag="VNA10_06110"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HVG37288.1"
                     /translation="MEGRAEAGLGMTDLFTILIVAILVVFSFDFFNGFHDAANAIATI
                     VATKVLTPTKAVAMAAAGNFVGMVFITNAIAETIGKGIIDTNVLGVNALPLSEAAFYH
                     SMAIIMGGVVGAIVWDLVTWLWGLPTSSSHALIGGIIGSTVLAVGPGAVLLPSTTNML
                     LFVFVTGMAFVLGAASFFAYDVIIRRHRPTLGTTILAGLLVGLLPAVILGKILLKGLV
                     QIVVYMVAAPLVGLTFAFGLALVVIRLFRRHT"
     gene            complement(777..1406)
                     /locus_tag="VNA10_06115"
     CDS             complement(777..1406)
                     /locus_tag="VNA10_06115"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HVG37289.1"
                     /translation="MGLKGWIIPQERQFFDLLEKLAATVDEGAIALADLLHDFRDVPM
                     KCRRIKDVEHHGDEIVHRVYEELNKTFITPIDREDIQALATELDNVLDMIEAASSRIG
                     LYEINRPTEAMVQLGNVIKDGTRLLREAVGMIRNMKQANGVERIAIEVHRLENVADDL
                     MNNAVAALFHQEDPVTIIKFKEITEVLEQATDHCEDVANVLSDIVAKNQ"
     gene            complement(1473..>2568)
                     /locus_tag="VNA10_06120"
     CDS             complement(1473..>2568)
                     /locus_tag="VNA10_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177011.1"
                     /note="with 7S RNA and Srp19 binds to the signal sequence
                     of presecretory protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle protein Srp19"
                     /protein_id="HVG37290.1"
                     /translation="VKILGATREVPLQKQRILLVGLYGQGKTTTAGKLAKFFQKKGLS
                     VGLVAADVHRPAAYDQLKQLAEQINAPFYGEPSAKEAVKIAKAGVKALAASDVIIVDS
                     SGRHALEPDLIAEIEGVAKAVQADERLLVLDATVGQQAGPQAKAFHDAVGITGVIVTK
                     LDGTAKGGGALSAVAEVKAPIVFIGVGEKIEDLEKFEPPRFISRLLGMGDLETLLERA
                     QEAIDAQKAEALTKKIMAGKFTLHEMYEQIEMLTDMGPMRKLASMIPGMGGKMKDADM
                     ESTQARLRRFKIIMDSMTDDEMKDPKLVKSSRVQRIARGAGVAPRDVKELLRNYEMSR
                     KAIKGFAGNRKMRKQLMQQLEASGVNLDEG"
BASE COUNT          431 a          856 c          766 g          515 t
ORIGIN      
        1 gagtgtgtcg gcggaacaga cggatgacca cgagcgcgag gccgaacgcg aacgtgagcc
       61 ccacgagcgg cgcggcgacc atgtacacca cgatttggac gagccctttc agaaggatct
      121 ttccgaggat gaccgccggg agaagtccca cgagcagacc ggccaggatc gtcgtcccga
      181 gcgtcggccg gtgccttcgg atgatgacgt cataggcgaa gaacgaggcg gcgccgagca
      241 cgaacgccat ccccgtcacg aagacgaaga ggagcatgtt cgtcgtgctc ggaaggagga
      301 ccgctccggg tcccaccgcg agcaccgtcg agccgatgat gccaccgata agcgcatggc
      361 tgctcgacgt cgggaggccc cacagccacg tgaccaggtc ccacacgatc gcgccgacga
      421 caccccccat gataatggcc atcgaatggt agaacgcggc ctcgctcagc ggtagggcat
      481 tcaccccgag gacgttcgtg tcgatgatcc ccttgccgat cgtttccgcg attgcgttcg
      541 tgatgaagac catcccgacg aagttgccgg ccgcggccat ggccaccgcc ttcgtcggcg
      601 tgaggacttt cgtcgcgaca atcgtcgcga tcgcgttcgc ggcgtcgtgg aacccgttga
      661 agaagtcgaa cgagaagacg acgaggatcg cgacgatgag gatcgtgaag agatccgtca
      721 ttcccagtcc tgcctccgcg cgtccctcca tcccgcggcg agagacctcc gacgacctac
      781 tgattcttcg ccacaatgtc gctcagcaca ttggcgacgt cctcgcagtg gtccgtggcc
      841 tgctcaagga cttccgtgat ctccttaaac ttaatgattg tcacgggatc ctcctggtgg
      901 aagagcgccg caaccgcatt gttcatgagg tcgtcggcca cgttctcgag gcggtggacc
      961 tcgatggcga tccgctcgac cccgttggcc tgtttcatgt tgcggatcat cccgacggcc
     1021 tcccgcagga gccgcgtccc gtccttgatc acatttccga gctgcaccat cgcctcggtc
     1081 ggtcgattaa tttcatacag gccgatccgg ctcgaggccg cctcaatcat gtcgaggacg
     1141 ttgtcgagct cggtggcgag ggcctggatg tcttcccggt cgatcggcgt gatgaacgtc
     1201 ttgttcaatt cctcgtaaac ccgatggacg atctcgtcgc cgtggtgctc cacgtccttg
     1261 atccgtcggc acttcatcgg cacgtcgcgg aagtcgtgta gcaggtccgc cagggcgatc
     1321 gcaccctcgt cgaccgtggc ggcaagcttc tcgaggaggt cgaaaaactg acgctcctgc
     1381 gggataatcc atcctttcaa acccatggcc ctcgctcccc gttaacgcgg tagtcctagg
     1441 attacattaa ggtgtcgcat cggaccggcg tgtcagccct cgtcgaggtt cacgcccgag
     1501 gcctcgagct gctgcataag ctgcttccgc atcttccggt tccccgcgaa gcccttgatc
     1561 gccttgcggg acatctcata atttcgaagt agctccttca cgtcgcgtgg cgctacgccc
     1621 gcaccgcgcg cgatccgttg cacgcgggag gacttcacga gcttcgggtc cttcatctca
     1681 tcgtctgtca tcgaatccat gatgatcttg aaccggcgga ggcgcgcctg cgtgctctcc
     1741 atgtcggcat ctttcatctt gcctcccatg cccggaatca tggaggcgag cttccgcatg
     1801 ggtcccatgt ccgtcagcat ctcgatttgt tcgtacatct cgtggagcgt gaacttcccg
     1861 gccatgatct tcttcgtaag cgcttccgcc ttctgcgcgt cgattgcttc ctgcgcgcgt
     1921 tcgaggagcg tttcgaggtc gcccatgccc aagaggcgcg agatgaaccg cggcggctcg
     1981 aacttctcga ggtcctcgat cttctcgccg acgccgatga agacgatcgg cgccttcacc
     2041 tcggccacgg cggacagggc cccgccccct ttcgcggtgc cgtcgagctt cgtgacgatg
     2101 acccccgtga tcccgaccgc gtcgtggaac gccttcgcct gcggccccgc ctgctgcccc
     2161 acagtcgcgt cgagcacgag caggcgttcg tccgcctgca ccgccttcgc gaccccctcg
     2221 atctcggcga tcaggtccgg ctcgagcgcg tgacgacctg acgagtcgac gatgatcacg
     2281 tcgcttgcgg cgagggcctt gacgccggcc ttcgcaatct tcacggcttc cttcgcgctc
     2341 ggctccccgt agaacggtgc gttgatctgc tccgcgagct gcttgagctg atcgtacgcc
     2401 gccgggcggt ggacgtccgc cgcgacgagg ccgacggaga gccctttctt ctggaagaac
     2461 ttcgccagct ttccggcggt cgtcgtcttg ccttggccgt acagcccgac gaggaggatc
     2521 cgctgtttct ggagcgggac ctcgcgggtg gcccccagga tcttcacg
//
LOCUS       DATLMA010000479         2479 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_105880, whole genome shotgun sequence.
ACCESSION   DATLMA010000479 DATLMA010000000
VERSION     DATLMA010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105880"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VNA10_06125"
     CDS             <1..374
                     /locus_tag="VNA10_06125"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HVG37291.1"
                     /translation="VVLVTGDRAVTAEAKALLPNVHTVAVKDATGATSAKNLHPKMAR
                     EQIQGEAAKALRDAKTIAPLRAKTPIQMVVEFRGTYAADRAAMIPTVRRVGGLRFEFQ
                     ADDYPEAFRTFYAMVTIAGGE"
     gene            453..1070
                     /locus_tag="VNA10_06130"
     CDS             453..1070
                     /locus_tag="VNA10_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37292.1"
                     /translation="MAAKKAKGDDWFSSLDAELEKKTKEIIEDVGEQNVARLELNKTL
                     IEDFWKVWKRFNKINVHFALEPSYTNWAVFPDTFPDGDWHWRPGFNPAAVQTIQLLDR
                     SMDQGRVGDALKVNYVEADGKIHLRVTFEYCEGEHYYKYSGWKRIWTVHTLYEQPLDH
                     ANVDDLHRLFADLVRTWYESHLRRNRDVLIKYLKQTFEKIETFNQ"
     gene            1148..1477
                     /locus_tag="VNA10_06135"
     CDS             1148..1477
                     /locus_tag="VNA10_06135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc finger protein"
                     /protein_id="HVG37293.1"
                     /translation="MEDLLSGALLVLLVGGAVFAWADWRIRARRLPQMVGLSWDCPHC
                     GVKNEADLGVCWSCGAGIGRYAFSRVRASASETWQCRQCRAWNSTSRRSCWSCANTPA
                     KQPKGHA"
     gene            complement(1480..2271)
                     /locus_tag="VNA10_06140"
     CDS             complement(1480..2271)
                     /locus_tag="VNA10_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008476827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HVG37294.1"
                     /translation="MDLGLRGKVALVAAASQGLGRAAAFALAREGCKVAICARNARAV
                     EDAAKSIRKETNADLIAIPADVSRADGVKAFADRAIKTFDGVDVVVPNAGGPPPGGFE
                     TVSDDQWAKGWELTFQSTVRLVRACLPSMRERGGGAVVAILSMSVRQPIDNLLLSNSL
                     RLGLVGALKTLAREVAKDRIRVNGVAPGWIATDRTIELHRARAEKERRRIEEVQAEML
                     QEIPMGRMGTAEEVADLIAFLASDRAAYITGVIAQIDGGLYRGIF"
BASE COUNT          472 a          792 c          787 g          428 t
ORIGIN      
        1 cggtcgtcct cgtcacggga gaccgggccg tgaccgccga ggcgaaggcg ctcctcccga
       61 acgtccacac ggtcgcggtg aaagacgcga cgggggcaac gtcggcgaag aatctgcatc
      121 cgaagatggc gcgtgaacag attcagggcg aggccgcaaa ggcgttacga gacgcgaaga
      181 cgatcgcacc gctgcgagcg aagaccccga tccagatggt cgtcgagttc cgtggcacgt
      241 atgcagccga ccgtgccgcg atgatcccga ccgtccgacg tgtcggcgga ttgcggtttg
      301 agttccaggc agatgactat ccggaagcat tccggacttt ctacgcgatg gttaccatcg
      361 cgggtggcga atgaatcgcg tctccagatg acgctgacaa atacctatat agtgagagat
      421 ttcattcggc gatggtgaga agggacttgg ccatggcggc gaagaaggcc aagggggatg
      481 actggttctc ctccctggac gcggaactcg agaaaaaaac caaggaaatc atcgaggacg
      541 tcggagagca gaacgtcgcc cggctcgagc tcaacaagac cctgatcgag gacttctgga
      601 aggtctggaa gcggttcaac aagatcaacg tccacttcgc cctcgagcca tcgtacacga
      661 actgggccgt gttccccgac accttccccg acggagattg gcactggcgg cccggtttca
      721 atcccgcggc tgtccagacg atccaattgc tcgaccgctc gatggaccaa ggccgggtcg
      781 gggacgccct caaggtgaac tacgtggaag cggacggcaa gatccacctc cgggtgacgt
      841 tcgaatattg tgaaggggag cattactaca agtacagcgg atggaagcgc atctggacgg
      901 tccacacgct ctacgagcag ccgctcgacc acgcgaacgt ggacgacctc caccggctct
      961 tcgcggacct cgtccggacg tggtacgaga gccatttgcg gcggaaccgc gacgtcctca
     1021 tcaagtacct caagcagacg ttcgaaaaga tcgagacgtt caatcagtga ttgcgaccgc
     1081 ggagtagtga cgccggtgat aaccggcgga gagtctatat taccgcctcg cgggaatttt
     1141 cttcaacgtg gaagacctgc tgtccggcgc tctcttggtg ctccttgtcg gcggcgcggt
     1201 cttcgcctgg gccgactggc ggatccgggc ccggaggctg ccacagatgg tcggtctgag
     1261 ctgggattgc ccccactgtg gggtcaagaa cgaagcggac ctcggcgtct gctggtcttg
     1321 cggcgccgga atcgggcgct acgcgttctc ccgggtccga gcgtccgcgt cggagacctg
     1381 gcagtgccgc cagtgccgcg cgtggaacag cacctcccgc cgttcctgct ggtcgtgcgc
     1441 gaacacgccc gcgaaacagc cgaagggcca tgcgtaatct cagaagatcc cgcggtacag
     1501 tccgccgtcg atctgcgcga tgacgccggt gatgtaggcc gcgcggtctg aggccaggaa
     1561 agcaatcaga tccgcgacct cctccgccgt gcccatgcgg cccatcggga tttcttgcaa
     1621 catctccgct tgaacctcct cgatgcgacg ccgctccttc tcggcgcggg cgcgatggag
     1681 ctcgatcgtc cggtccgtcg caatccaccc cggggcgacg ccgttcaccc gaatccggtc
     1741 ttttgcgacc tctcgggcga gcgtcttcaa ggctccaacg agtccgaggc ggagggagtt
     1801 cgacaagagg agattgtcga tcggctggcg caccgacatc gagaggatcg cgactacggc
     1861 accgccaccc cgctcccgca tggatggcag gcacgcgcgg acgagccgga ccgtgctctg
     1921 gaacgtcaac tcccagcctt tcgcccactg gtcgtcggag accgtctcga atccgccggg
     1981 aggcggcccg cccgcgttcg ggacgacgac gtcgacgccg tcaaacgttt tgatcgcgcg
     2041 gtcggcgaag gccttgaccc cgtccgcgcg cgacacgtcc gccggaattg ctatgagatc
     2101 cgcgttggtt tccttccgga tggatttcgc ggcatcctcg actgcacgcg catttcgcgc
     2161 gcagatggcg accttgcatc cctctcgggc gagcgcgaac gcggccgccc gaccgagtcc
     2221 ctggctcgcg gcggcgacaa gggcgacttt gcctcggagt cccaggtcca cgaggcgcaa
     2281 tcgggacggc tcgtaagaag gattcgcccc ggtggactca ctcgcggacg aaccctcgga
     2341 cctcgccgac cggttcgaag ccgagggtct tgtacatttc cttgggcgtg tcgaacattt
     2401 ccgtggtcaa caccacccat tcgcaccggg cgctagccgc gcggcggcac gcctcgaaga
     2461 tcatcgtccg tgcaacacc
//
LOCUS       DATLMA010000480         1248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_772208, whole genome shotgun sequence.
ACCESSION   DATLMA010000480 DATLMA010000000
VERSION     DATLMA010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772208"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VNA10_06145"
     CDS             <1..792
                     /locus_tag="VNA10_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011308972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HVG37295.1"
                     /translation="KTYPGVPAPRGDVDLVVVRENIEDLYAGIEFDVDSPEEREVQEV
                     IERVGKAKIREHSALAIKAISDFGSRRIVKFAFEYARDNGRRKVTAVHKANIMKYADG
                     LFLRVAREVANDYPGIEFEDRIVDNMCMQLVVKPNLYDVLVLPNLYGDIVSDLVAGLV
                     GGLGVAPGANIGENGVAMFEAIHGSAPKYAGLNKVNPMALMLAGTLMLRHIAEREAGD
                     RLERAIASVVAEGKEVTYDLKADRDDPSAVGTKEFADAVIRRMRN"
     gene            792..1241
                     /locus_tag="VNA10_06150"
     CDS             792..1241
                     /locus_tag="VNA10_06150"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HVG37296.1"
                     /translation="MPTTDPKRLNRYLYTTGSRGEFQFGFSRAIRHGTVVRVAGTAGI
                     GEDGSVVSDDVVEQMRAAINTLKASLEDLGCTIDDVIMTRVYVRNAADIQNVAVVHGE
                     VFRDIRPAMTIVKVDFIDPHILVEIEAEAVYGGADEKSDGKTSAPTG"
BASE COUNT          250 a          388 c          412 g          198 t
ORIGIN      
        1 aagacctacc ccggtgttcc cgcgccgcgc ggggacgtcg acctcgtcgt ggtccgcgag
       61 aacatcgagg atctctacgc gggcatcgag ttcgacgtcg actcgccgga ggagcgcgag
      121 gtgcaggagg tcatcgaacg ggtcggcaag gcgaagattc gcgagcactc cgccctcgcg
      181 atcaaggcga tcagcgactt cgggtcacgg cggatcgtga agttcgcatt tgagtacgcg
      241 cgggacaacg gccgccgcaa ggtcactgcg gtccacaagg cgaacatcat gaaatacgcc
      301 gacggcctct tcctccgcgt cgcccgcgag gtcgcaaacg actaccccgg gatcgagttc
      361 gaggaccgca tcgtcgacaa catgtgcatg cagctcgtcg tgaagcccaa cctgtatgac
      421 gttctcgttc tccctaactt gtacggcgac atagtgagcg accttgttgc cgggttagtc
      481 ggcggcctgg gcgtcgcgcc aggagcgaac atcggcgaga acggcgtcgc aatgttcgag
      541 gcgatccacg gatccgcgcc caaatacgcc ggactcaaca aagtgaaccc gatggcgtta
      601 atgctggcgg ggacattgat gctccgtcac attgctgagc gcgaggccgg cgaccgcctc
      661 gagcgcgcga tcgcgtccgt ggtcgcggag ggcaaggaag tcacctacga cctcaaggcg
      721 gatcgggacg atccatccgc cgtcggaacg aaggaattcg ccgacgctgt gatcagaagg
      781 atgcgcaact gatgccgacg acagatccaa agcgtctgaa ccgctacctg tacacgaccg
      841 ggagccgagg tgagttccag ttcggctttt cgcgggccat ccgccacggc accgtcgtcc
      901 gcgtcgcggg gaccgccggg atcggcgagg acggcagcgt cgtgtccgac gacgtggtcg
      961 agcagatgcg cgccgcgatc aacaccttga aggcctcgct ggaggacctc ggctgcacga
     1021 tcgacgacgt gatcatgacg cgggtgtacg tacggaacgc cgccgacatt cagaacgtcg
     1081 ccgtcgtgca cggtgaggtg ttccgcgaca tccggcccgc gatgacgatc gtgaaggtgg
     1141 acttcatcga cccgcacatc ctcgtcgaga tcgaggccga agccgtctac ggcggcgcgg
     1201 acgagaagtc ggatgggaag acgagcgcgc cgaccggttg acactcca
//
LOCUS       DATLMA010000481         3979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_464839, whole genome shotgun sequence.
ACCESSION   DATLMA010000481 DATLMA010000000
VERSION     DATLMA010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464839"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VNA10_06155"
     CDS             <1..328
                     /locus_tag="VNA10_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007314873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="6-oxopurine nucleoside phosphorylase"
                     /protein_id="HVG37297.1"
                     /translation="AAFVGAAKDAKATVHERGTYVQTTGPRLETRAEVAHFTKIGDIV
                     GMTMASEATLASEIGIPYASLCTVDNFCNGIVDEPLTFEKIRETQRQNADLTRTVVAK
                     ALERIR"
     gene            325..1581
                     /locus_tag="VNA10_06160"
     CDS             325..1581
                     /locus_tag="VNA10_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013683768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HVG37298.1"
                     /translation="MSILIRDVQVEGDVTQVYIEGNRIVEIGRKREADTVIDGKGKIA
                     LPGFVNLHTHAAMTLFRGWGDDLDLSTWLETKIRPAEAKLTADDVYWGTKLACLEMIK
                     TGTTTFNDMYFHMDSAAKAVREMGLRGFLAEGIVDLNDSERAAKQFRTAEEVNRRIEA
                     MKTDRITPVLGPHAIYTVSKDSLLRIRELADKTGSLIHIHLSETRREVDDCVTETGAR
                     PAKYLDGLGFLAKDVIAAHGCWLDPAEIELLARTGTRVAHCPISNMKLSTGQAMPYAA
                     MKEAAVVMGLGTDGAASNNNLDMFETMKVAALLQKFAHRDPTVLPSLEAFQLATFGGA
                     RALGIDAGLIGVDRLADLILVDPRRPELTPRHNDISNWVYSAHGNVVDTMICDGAVLM
                     RGRRVRGEAEILEKAAAVARDLVSRV"
     gene            1583..2146
                     /gene="hpt"
                     /locus_tag="VNA10_06165"
     CDS             1583..2146
                     /gene="hpt"
                     /locus_tag="VNA10_06165"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013100486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine/guanine phosphoribosyltransferase"
                     /protein_id="HVG37299.1"
                     /translation="MALDRLRASLAESPIVRFGEYEYFVHPITDGIPLGRPEVLDEVL
                     SELARIGDWNRCDKIVTAESMGFPLAAGLAMRVRKPYVFVRKRQYGLPGEVSLKQTTG
                     YSKTDMFINNIRRGDRIVFVDDVISTGGTLVAIVKALRTIGAEIVDVLIVFEKTREKA
                     RFEKELGLRIKTLLKVDVVQGKLVERA"
     gene            complement(2143..3396)
                     /locus_tag="VNA10_06170"
     CDS             complement(2143..3396)
                     /locus_tag="VNA10_06170"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HVG37300.1"
                     /translation="MAGTEVLYQQLTILLVLATLSHFTIKRFRQPTIVGEIVLGILLG
                     PSVIGYYFNVTLFDPALVASFASLGAIFLLFVIGLETDFRTIYTRKNIVVASGGVALP
                     LVFGFLAAYLLVPSGDVGVNGTQFTMALFVGATLTATSTAIAAAVLLDLGLMRQPIAE
                     TIMGAAVVDDILSLIILSLVVGTSRGQLDPVSLAVLVGTALAFLGVGMAVGLYFFRKV
                     VVRIQVEGMKLGLKHGGFIIAMAITFLYAFIAEVVGLSAIVGAFLAGSLFGGTPLRED
                     FTEGAGYLGAVFTPIFFISLGLQVDLPAATGSSQLLVFGVVLTVGAILTKVIGCGIPA
                     RLSKMTRHESAAVGWGMTPRGEVGLIVALSALTAEVIRDSLFSVIVVVMVLVSVLPAP
                     LFKRALANVDKDRRSVEPAGTPDPP"
     gene            complement(3525..3665)
                     /locus_tag="VNA10_06175"
     CDS             complement(3525..3665)
                     /locus_tag="VNA10_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37301.1"
                     /translation="MKIQFHKILSEGRSVRYDPDPDDGVLHLSVIVTDDEVRRNRAKR
                     TQ"
BASE COUNT          805 a         1226 c         1320 g          628 t
ORIGIN      
        1 cgcggcgttc gtcggagccg cgaaagacgc gaaggcgacg gtccacgaac gtgggaccta
       61 tgtacagacg accggaccgc ggctcgagac tcgagccgag gtcgcgcact tcacgaaaat
      121 cggggacatc gtcgggatga cgatggcctc ggaagccacg ctcgcatccg agatcggaat
      181 cccgtatgcc tccctgtgca cggtcgacaa cttctgcaac ggaatcgtgg atgagccgct
      241 gacgttcgaa aagatccgcg agacgcagcg ccagaacgcg gacctcaccc ggacggtcgt
      301 cgcgaaggcg ctggagcgaa tccgatgagc atcctcatcc gggacgtgca ggtcgaaggc
      361 gacgtcaccc aggtgtacat cgagggaaac cggatcgttg aaatcggccg gaagcgggaa
      421 gcggacacgg tgatcgacgg aaaaggaaag atcgcgctcc cgggattcgt gaacctccac
      481 acgcacgcgg cgatgacgct cttccgcggt tggggcgatg acctcgatct gtcgacgtgg
      541 ctggagacga agatccggcc ggccgaggcc aaactcaccg ccgacgatgt ctactggggg
      601 acgaagctcg cgtgcctcga gatgatcaag accggcacga ccaccttcaa cgacatgtac
      661 ttccacatgg actcggcggc gaaggccgtg agggagatgg gcctccgcgg gttcctcgcc
      721 gaaggcattg tggacctcaa tgattcggag cgagccgcaa agcaattccg tacggcggag
      781 gaagtgaacc gccggatcga ggcgatgaag acggaccgga tcacgccggt gctcggtccc
      841 cacgccatct atacggtctc gaaggactcg ctcctccgta tccgagagct cgcggacaag
      901 acgggctcgc tgatccacat ccacctttcc gagacccggc gagaggtgga cgactgcgtc
      961 acggaaaccg gtgcccggcc cgcgaaatac ctcgatggcc ttggattcct cgcgaaggac
     1021 gtgatcgcgg cccacggttg ttggctcgac ccagccgaga tcgagctgct ggcccgcacc
     1081 gggacgcggg tggcccactg cccgatctcg aacatgaagc tctcgaccgg gcaggcgatg
     1141 ccgtacgccg cgatgaaaga ggccgccgtg gtcatgggcc tcgggaccga cggcgcggcg
     1201 agcaacaaca acctcgacat gttcgagacg atgaaggtcg cggcgctcct ccagaagttc
     1261 gcccatcggg acccgacggt cctgccgtcg cttgaggcgt tccagctcgc gacgttcgga
     1321 ggtgcacgcg ccctcgggat cgacgccggg ttgattggcg tcgaccgcct cgcggacctc
     1381 atcctcgtcg atccgcgccg gccggagctt accccgcgcc acaacgacat cagcaattgg
     1441 gtctattccg cccatgggaa tgtcgtggac acgatgatct gcgacggtgc cgtgctgatg
     1501 cgcggccgcc gggtccgcgg agaagcggaa atcctcgaga aggccgcggc ggtcgcgcgg
     1561 gatctcgtct cgagggtctg agatggccct cgaccggctg cgcgcgagtc tcgcggaatc
     1621 gccgatcgtc cgtttcgggg agtacgagta tttcgtgcac ccgatcacgg acgggatccc
     1681 cctgggccgt ccggaggtcc tcgacgaagt cctgtccgaa cttgcgcgga tcggcgactg
     1741 gaaccggtgc gacaaaatcg tcacggcgga atcgatgggc ttccccctcg ccgccggatt
     1801 ggcgatgcgc gtccggaaac cgtacgtctt cgtccgcaag cgtcagtacg gtttgccggg
     1861 agaggtgtcg ctcaagcaga cgaccggcta ctcgaagacg gacatgttca tcaacaacat
     1921 ccgccgcggc gaccgcatcg tcttcgtcga cgacgtgatc tcgaccggcg gcactctggt
     1981 ggcgatcgta aaagcgctgc ggacgatcgg cgccgagatc gtggacgtcc tcatcgtgtt
     2041 cgagaagacc cgcgagaagg cgcggttcga gaaggaactc ggcctccgaa tcaagacgct
     2101 cctcaaggtc gacgtggtcc agggcaagct cgtcgagcga gcctagggcg gatcgggcgt
     2161 accggcgggc tctaccgatc ggcgatcctt gtccacgttc gcgagggccc gcttgaacag
     2221 aggcgccgga aggaccgaca caaggaccat cacgacgacg atcacggaga acagcgagtc
     2281 acgaatcact tccgcggtca gagccgacag tgcgacgatg agtccgacct cacctcgcgg
     2341 ggtcatgccc cacccgacgg ccgccgactc atggcgggtc atttttgaaa gccgggccgg
     2401 gatgccgcaa ccgatgacct tcgtgaggat cgcgcccacc gtcagcacga ctccgaagac
     2461 gaggagctgg gagctgccgg tcgcggccgg gaggtcgacc tgcaacccta gggagatgaa
     2521 gaagatcggt gtgaagaccg cgccgaggta gccggcgccc tccgtgaagt cctctcgaag
     2581 cggtgtgcct ccgaacaggc tcccggccaa gaacgcgccg acgatcgccg agagtccgac
     2641 gacctccgcg atgaacgcgt acaggaaagt gattgccatg gcgatgatga aaccgccgtg
     2701 cttgagtccc agcttcatcc cctcgacctg gatgcggacg acgacctttc ggaagaaata
     2761 caggccgacg gccatgccga cgccgaggaa ggcgagggcg gtcccgacga ggactgccaa
     2821 cgagaccggg tcgagttgac cccgactcgt gccgacgacg agcgagagga tgatcaggct
     2881 caggatgtcg tcgacgaccg cggcgcccat gatcgtctcc gcgatgggtt gtcgcatgag
     2941 gccgagatcg aggaggactg cggccgcgat agccgtgctc gtggcggtca gggtcgcgcc
     3001 gacgaagagg gccatcgtga actgcgtccc gttgaccccg acgtcgccgg aggggaccag
     3061 gaggtacgcg gcaaggaacc cgaacacgag cggaagggcc accccgccgc tggcgaccac
     3121 gatgttcttc cgcgtataga tcgtgcgaaa gtcggtctcc aagccgatca cgaacaggag
     3181 gaatatggcg cccagactgg cgaagctcgc cacgagagcg gggtcgaaca aggtcacgtt
     3241 gaagtaatag ccgatcacgc tcggccccag gagaatcccg agcacgatct cgcccacgat
     3301 cgtcggctgc cggaaccgct tgatcgtgaa gtggctcaag gtcgcgagga ccagcaggat
     3361 cgtgagctgc tggtacagga cttcggtgcc cgccatcgcg ggacagaaac gcgccgagcc
     3421 tattaaatcg ctaaccgaag gcggttcgtc accgatgggg cgcggcacgc gctcgcgttg
     3481 caggagaaca gacgacgcgg attcccgcac gtttccggag tcgatcactg agtgcgtttc
     3541 gcccgattgc ggcgcacttc gtcatcggtc acgatgacgc tgaggtgcaa gacgccgtcg
     3601 tccgggtccg ggtcgtaccg gacactccgg ccctccgaca gaatcttgtg gaactggatt
     3661 ttcacggtcc cgagacagtg gagggcgccg cgagattatg aaactcgacg gcgtggttct
     3721 ccgatacgat agatgataac gatttcccgc gccggatccg gcgtgcgacc tgaagcgagg
     3781 aacagaaaaa ggtgggatgg gaagaatcgg atgggtggtc tcactgcttc atcagatcga
     3841 ggccgttcca gtctccgccg aagtccttga cctggcccgt ggcgagctgg aaccgggcgc
     3901 ggagcttgcc gttctcgaag aagatgtacg cattccggag acaggatgtg tagaggttct
     3961 tcctcttgcc cttctgggt
//
LOCUS       DATLMA010000482         1211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_587693, whole genome shotgun sequence.
ACCESSION   DATLMA010000482 DATLMA010000000
VERSION     DATLMA010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587693"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1211)
                     /locus_tag="VNA10_06180"
     CDS             complement(<1..>1211)
                     /locus_tag="VNA10_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010876627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HVG37302.1"
                     /translation="SIVVAPAQTLSDTDHQTLRSAALRIIRALGVEGGCNIQFAVHPR
                     TREYRVIEVNPRVSRSSALASKATGYPIARIAAKIAIGLRLDEIPNPVTGKTLASFEP
                     TLDYVVTKIPRWPFDKFPTVDRRIGTSMKSTGEVMAIGRTFEESFLKAVRSLEIDRVG
                     LDSGPATDDQILQELREPTSERIFSIAEALRRGFAPEKIAEVTAWDLFFIEKIRHLVQ
                     LESRLRESRRSRSLLAEAKRFGFADESLAALTRTSEEVIRRSRPRVAYKMVDTCGGEF
                     EAQTPYFYSTYEATGETPPLKGRKVLIVGSGPVRIGQGVEFDYCCVQGILALREEGVA
                     AIIANNNPETVSTDFDISTRLYFEPLLLEDVLNIIEEEDPDGVILQFGGQTSINLALP
                     LARALRRRRSR"
BASE COUNT          227 a          390 c          372 g          222 t
ORIGIN      
        1 ccgagaacga cggcggcgca acgcccgcgc gagcggcagc gccaggttga tcgacgtctg
       61 gccgccaaac tgaaggatta ccccgtccgg gtcctcctcc tcgatgatgt tcagaacgtc
      121 ctcgagcagg agcggttcga agtacaggcg cgtggagatg tcaaagtcgg tcgagaccgt
      181 ctccgggttg ttgttcgcga taatcgcggc gacgccctct tctcgcaatg cgaggatgcc
      241 ttggacgcag caatagtcga attcgacacc ctggccgatc cggacgggtc cactgccgac
      301 aatcaagacc ttgcgtccct tcagcggcgg cgtctcgccc gtcgcctcgt acgtcgaata
      361 gaagtaaggc gtctgcgcct cgaactcgcc gccgcacgtg tccaccatct tgtacgcgac
      421 ccgcggtcga ctccgacgga tcacttcttc ggaggttcga gtgagcgcgg cgagcgattc
      481 atccgcgaac ccgaagcgct tcgcctccgc caagaggctg cgggaccgcc gggattctcg
      541 aagacgcgac tcgagctgca cgagatgccg tattttctcg atgaagaaca agtcccaggc
      601 cgtgacttcg gcgatcttct cgggcgcgaa ccctcgacgc agcgcctcgg caatcgagaa
      661 gatccgctcg gaagtaggct ccctcaactc ttggaggatc tggtcatccg tcgccggacc
      721 cgagtcgagt ccgactcgat cgatctcgag ggacctgaca gccttcagga aggactcctc
      781 gaacgtccgg ccgatcgcca tgacctctcc ggtgcttttc atcgaggtgc cgatgcgccg
      841 gtccaccgtc gggaacttgt cgaacggcca tcgcggaatc ttcgtgacga cgtagtcgag
      901 ggtaggctcg aaggaagcca gagtcttgcc ggtgaccggg ttcgggatct cgtcgaggcg
      961 gagcccaatc gcaatcttcg cggcgatgcg agcaatggga tagccggtcg ccttcgacgc
     1021 gagcgccgac gaacgggaaa cgcgcgggtt cacttcgatg acccgatact ccctcgtcct
     1081 cggatggacc gcgaactgga tgttgcaccc gccctcgacg cccagcgcac gaatgattcg
     1141 caacgcggcc gatcgcaacg tctggtgatc tgtgtcgctc aaggtctgtg ccggcgccac
     1201 gacgatcgat t
//
LOCUS       DATLMA010000483         1112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_168437, whole genome shotgun sequence.
ACCESSION   DATLMA010000483 DATLMA010000000
VERSION     DATLMA010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168437"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1022)
                     /gene="cysK"
                     /locus_tag="VNA10_06185"
     CDS             complement(75..1022)
                     /gene="cysK"
                     /locus_tag="VNA10_06185"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015780633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HVG37303.1"
                     /translation="MIHDDILGTIGNTPVVRINRLAPPNVTLYVKCEAFNPLSSVKDR
                     LAIGIIEDAERRGTLKPGQTVVEATSGNTGIALAMVCAVKGYPFVALMSESFSIERRK
                     LMRILGAKVILTPAADRATGMVRKTEELAKKHGWFVARQFENPANPEYHRNTTGPEIL
                     RDFAGKRLDYWVTGYGTGGTLTGAGEMIKKARPEAKIVVVEPEGAALLSGQEWKPHKI
                     QGWTPDFIPQVLDRDVYDEVLTVTDLEARDTARDLATQEGIFCGISSGGTFAGALKVA
                     KKAPKGSAILAMLPDTGERYFTTILFEGINEGSDEEPAG"
BASE COUNT          167 a          374 c          351 g          220 t
ORIGIN      
        1 gctcgaaggg ctggccgcgc gacctgccga ggaggccgag cgccctctcg cggctgtctg
       61 aaaccctgcg gtcgctatcc cgccggctcc tcgtcgctcc cttcgttgat cccttcgaac
      121 agaatcgtcg tgaagtaccg ctcgccggtg tcgggcagca tcgccaggat cgccgatccc
      181 ttcggcgcct ttttcgccac cttcagcgct ccggcgaaag tgccgccgga cgagatcccg
      241 cagaagatcc cctcctgggt cgctaggtct cgcgcggtgt cgcgcgcctc gaggtcggtc
      301 acggtcagca cctcgtcgta gacatcccgg tcgaggacct gcgggatgaa gtccggcgtc
      361 catccctgga tcttgtgggg cttccactcc tgcccggaaa ggagcgccgc tccctcgggt
      421 tcgacgacga cgatcttcgc ttccggacgc gctttcttga tcatctcgcc ggccccggtg
      481 agcgttccgc cggtgccgta cccggtgacc cagtagtcca gacgcttacc cgcgaagtcg
      541 cggaggatct cggggcccgt cgtgttgcgg tggtattcgg ggttcgcggg gttctcgaac
      601 tggcgggcga cgaaccaccc gtgtttcttc gcgagctcct cggttttccg gaccatcccg
      661 gtcgcccggt cggcggccgg cgtcaggatc acctttgcgc cgagaatgcg catgagcttc
      721 cgccgctcga tcgagaacga ctccgacatg agcgcgacga acgggtatcc cttcacggcg
      781 caaaccatcg caagcgcgat tccggtgttg ccggacgtcg cctcgacgac ggtctggccg
      841 ggcttcaaag tgccgcgcct ctccgcgtcc tcgatgatcc cgatcgcgag ccggtccttg
      901 accgacgaca gggggttgaa cgcctcgcac ttgacgtaca gggtcacgtt cggcggggcg
      961 agccggttga tgcggacgac cggcgtgttt ccgatcgtcc cgaggatatc gtcgtggatc
     1021 atgagccttt aataccactc tgtcggttgc aaagttgcaa tgtggcaagt ggagacctga
     1081 ccctcaatgt ggcaagtgga gacctgaccc ca
//
LOCUS       DATLMA010000484         2196 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_226840, whole genome shotgun sequence.
ACCESSION   DATLMA010000484 DATLMA010000000
VERSION     DATLMA010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226840"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VNA10_06190"
     CDS             <1..599
                     /locus_tag="VNA10_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37304.1"
                     /translation="FCLYCGAPLTTIGAEAAASPTAPPAPSAPVPHASPVRPMYMPRP
                     RTPDYVGLFGVAFFLLVLGIAFYLNGNLLTELRRWWDQVLAGRGAFRPPEGVIISAGL
                     FWGLLGVSNFGIAFLRWFFTRSRIRTLGAILGGIAMVMFSYFLYRYSVRDMSGSLVVA
                     LEAGVIAVLLFIYIGAGLYWTTPRYRPAYEGVYRAPRP"
     gene            complement(605..871)
                     /locus_tag="VNA10_06195"
     CDS             complement(605..871)
                     /locus_tag="VNA10_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37305.1"
                     /translation="MARLKEWFFHKPKPPVVNPQPPVVHPQPPVVRHQPDPPAVILSC
                     ERCGFDYSITRIEISGKPGIVWTCECGSEFIPPGGPESFDLVRP"
     gene            complement(1080..1763)
                     /locus_tag="VNA10_06200"
     CDS             complement(1080..1763)
                     /locus_tag="VNA10_06200"
                     /inference="COORDINATES: protein motif:HMM:TIGR02453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02453 family protein"
                     /protein_id="HVG37306.1"
                     /translation="MAEKSKYFTPEFFAFFSDLAKNNNKEWFTENKERYEKAVQEPSL
                     QFIRDAGSRLQKISSYIVADAKPFGGSLSRIYRDIRFSPDKSPYKTEVGIHFWHAKAP
                     GPEEMAPGYYLHMSSGETMAHSGVWHPDAPILKKIRDRIVDEPDAWKKVLRSRVAVEG
                     DSLKRPPPGYDPNHPLIQDLRRKDFVSSRSFRDNQVTSPQFLDSFIEVCESMEPLNRF
                     LAGAIGIPW"
     gene            complement(1797..2153)
                     /locus_tag="VNA10_06205"
     CDS             complement(1797..2153)
                     /locus_tag="VNA10_06205"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HVG37307.1"
                     /translation="MANAKEIVTAYQRALGKADFASARRYMHDDLSFVGPFESFNKPE
                     PYLEALGKLHHIIARVEPRKTFVDGDDVCLLYDMVTNTPAGTAFICEWYHVRGDKIAS
                     VRAVFDARPFAPIFNR"
BASE COUNT          342 a          706 c          697 g          451 t
ORIGIN      
        1 gattctgtct gtattgcggc gctccgttga ccacgattgg cgctgaagcc gcggcctccc
       61 cgaccgcgcc gcccgcgccg tcggctcccg tcccgcatgc gagccccgtc cggccgatgt
      121 acatgcctcg gccgcggacg cccgactacg tgggactgtt cggggtcgcg ttcttcttgc
      181 tcgtcctggg aatcgcgttc tacctcaacg gcaacctgct cacggaactc cggcggtggt
      241 gggatcaagt cctcgccggg cgaggcgcgt tccgccctcc agagggcgtg atcatcagtg
      301 ccgggctctt ctggggactc ctgggcgtct ccaacttcgg gatcgccttc ctccgatggt
      361 tcttcacgcg ctcgcggatc cggacgctcg gtgcgatcct cggcgggatc gcgatggtca
      421 tgttctcgta cttcctgtat cggtattcgg tgcgggacat gagcgggtcg ctcgtcgtcg
      481 cgctcgaggc tggggtgatc gcggtcctgt tgttcatcta catcggtgcg ggcctctact
      541 ggacgacccc gcggtaccgg ccggcctacg aaggcgtcta tcgtgcgccg cggccgtgat
      601 gggatcaggg ccggacgagg tcaaacgact cgggtcctcc gggcggaatg aattcgctgc
      661 cgcactcgca ggtccagacg atgcccggtt tgccgctgat ctcgattcgc gtgatgctgt
      721 agtcgaagcc gcaccgctca cacgatagga tgacggccgg gggatcgggt tggtggcgca
      781 ccacgggcgg ttgggggtgc acgacgggcg gttgcgggtt gaccacgggc ggcttcggct
      841 tgtggaaaaa ccactccttc aatcgcgcca accggcgaac gccttccgaa ccgttgaccg
      901 ccgacgccgg cgatggcgcc tccggcgccg cacgtgagcc cccttgtgga ccgttctcca
      961 tcggtcctcc gcctccccag atgggtatcg catttctgcg ccataaaggt cgctggccct
     1021 tctctcgtcc gataatgagg atgaaccgcg aggaggacgc gattgccaag ctcggcggac
     1081 taccagggga tgccgatcgc acccgcgagg aagcggttca gcggttccat cgactcgcac
     1141 acctcgatga acgagtcgag gaactgcggg ctcgtgacct ggttgtcgcg gaagctccgg
     1201 ctcgaaacga agtccttccg tcggaggtcc tggatgagtg gatggttcgg atcgtaaccg
     1261 ggcggtggcc gcttgagcga atcgccttcg accgccacgc ggcttcggag gaccttcttc
     1321 cacgcgtccg gttcatcgac gatccgatct cggatcttct tcaggatggg cgcgtccgga
     1381 tgccaaacgc cggagtgggc catcgtttca cccgaggaca tgtggagata gtagccgggc
     1441 gccatctcct ccggaccggg cgccttcgcg tgccagaaat ggatcccgac ctccgtcttg
     1501 taggggctct tgtccggcga gaatcggatg tcgcggtaga tgcgggacag cgatccgccg
     1561 aagggcttag cgtctgcgac gatgtacgag ctgatcttct gcaggcgcga tccggcgtcg
     1621 cggatgaatt gcagactcgg ctcctgcacg gccttctcgt accgttcctt gttctcggtg
     1681 aaccactctt tgttgttgtt cttcgccagg tcgctgaaga acgcgaagaa ctccggggtg
     1741 aagtatttcg atttctcggc catctcttgg gatctcccct cccgcaatat cgcgattcac
     1801 cggttgaaga ttggcgcgaa cggccgggca tcgaagaccg cgcgaacgga ggcgatcttg
     1861 tccccgcgca cgtgatacca ttcgcagatg aacgccgtcc cggcgggggt gttcgtcacc
     1921 atgtcgtaca acaggcagac gtcgtcgcca tcgacgaacg tcttcctcgg ctccacccgt
     1981 gcaatgatgt ggtggagctt cccgagcgcc tccaagtatg gctccggctt gttgaacgac
     2041 tcgaacgggc ccacgaacga aagatcgtcg tgcatgtacc gccgcgcgct cgcaaagtcg
     2101 gccttcccca atgctctctg atacgccgtc acaatctctt tcgcattcgc cattcactca
     2161 cgctccgtcg gcagggcggg cgcgtcctgc caggcc
//
LOCUS       DATLMA010000485         1110 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_887903, whole genome shotgun sequence.
ACCESSION   DATLMA010000485 DATLMA010000000
VERSION     DATLMA010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887903"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1110)
                     /locus_tag="VNA10_06210"
     CDS             complement(<1..>1110)
                     /locus_tag="VNA10_06210"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HVG37308.1"
                     /translation="GSASGGVWKTTDGGVFFKPIFEKYPASIGAIAIAPSNPNLVWVG
                     TGEANPRNNVIDGHGVYFSPDAGASWRLVGLAEAGQISRILIDPGDPNTVYVAALGNV
                     WKPNAERGIFRTTDGGGTWKKVLFVDEQTGASDLAMQPGNSRVLLAGMWQFRRFPWEF
                     VGGGPGSGIWKSTDGGGTWKKLEKDMPEGPLGRISLAIAPTNGNHVYALIHARKGILF
                     ESKDLGEKWEKLSDTRLINVRPWYFSVIAVSPADENKVYFGSFNLVTSIDGGKTFQTN
                     NRKIHPDYHALWIDPKDPDRILQGNDGFALGSTDGGKTWRGFENLPLGQFYQVAVGSD
                     APYTICGGLQDNNGWCGASNSLARGGISDADWFVV"
BASE COUNT          181 a          360 c          360 g          209 t
ORIGIN      
        1 tcacgacgaa ccagtcggcg tcgctgatgc cgccgcgcgc gagtgagttc gaggcgccgc
       61 accagccatt gttgtcttga aggccgccgc agatcgtata aggggcatcc gatcccacgg
      121 ccacttggta gaactgcccg agcggcaggt tctcgaagcc tcgccaggtc ttgccgccgt
      181 cggtcgaccc gagcgcgaag ccgtcgttgc cttgaaggat ccggtccggg tccttcggat
      241 cgatccacag agcgtgatag tccggatgaa tcttccggtt gttggtctgg aaggtcttgc
      301 cgccgtcgat cgacgtcacg aggttgaagg agccgaaata gaccttgttc tcgtccgccg
      361 gcgagaccgc gatcacggag aaataccagg gccgcacgtt gatcagccgc gtatcggaga
      421 gcttttccca tttctcgccg aggtctttcg actcgaacag gattcccttc cgggcgtgga
      481 tcagcgcgta gacgtggttg ccgttcgtgg gagcgatcgc gagcgagatc cgtccgagcg
      541 gaccttccgg catgtccttc tcgagtttct tccaggtccc tccgccgtcg gtggacttcc
      601 agatgccgct gccggggcct ccaccgacga actcccacgg gaatcgccgg aactgccaca
      661 tgcccgcgag cagcacgcgg gagttgcccg gctgcatcgc caggtcggaa gctccggtct
      721 gctcgtccac gaagaggacc ttcttccagg tcccgccgcc gtcggtcgtt cggaagattc
      781 cgcgctccgc attgggcttc cagacgttgc cgagcgccgc gacgtacacc gtgttcggat
      841 cgcccggatc gatcaggatg cgcgagatct gaccggcctc ggcgaggccc acgaggcgcc
      901 agctcgcgcc cgcgtcgggc gagaagtaga ccccgtggcc gtcgatgacg ttgttccggg
      961 ggttggcttc gcccgtgccg acccagacga ggttcgggtt ggagggagcg atcgcgatgg
     1021 ctccgatcga ggcgggatac ttctcgaaga tcggcttgaa gaagacgccg ccgtccgtcg
     1081 tcttccagac gccgcccgac gccgatccga
//
LOCUS       DATLMA010000486         1728 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_772375, whole genome shotgun sequence.
ACCESSION   DATLMA010000486 DATLMA010000000
VERSION     DATLMA010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772375"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1066
                     /locus_tag="VNA10_06215"
     CDS             <1..1066
                     /locus_tag="VNA10_06215"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HVG37309.1"
                     /translation="WGDVDAERMRVGISWAELSKAYGYAQVPSTYGGHTYLKQGYLDK
                     RVCPSRDAVRKIASLLGSASLAAIARSNIYWDEVDSITFGGREDVFDIEVDGSHNFIA
                     EGVLVHNSTVAANLAVVLAEDGSAGIVDADVTGPDIPILMGVQDAQVKATETGMEPTV
                     GPAGVKVISMAQLIDRDTAIVWRGPLKIKALKQMLSDVEWGDLDYLVIDLPPGTSDEP
                     LSVAQEIPDADGAVVVTTPQQVSLLDVRKSIAFAKAVKMDILGVIENMSGFVCPHCGK
                     ETDIFKVGGGEAAAKELGLPFLGRIPLDPRIVIGGDVGKPFVLEHPDSEAAKAFRAIV
                     KNLKPHLKEARPRPTGPLVK"
     gene            complement(1127..1411)
                     /locus_tag="VNA10_06220"
     CDS             complement(1127..1411)
                     /locus_tag="VNA10_06220"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HVG37310.1"
                     /translation="MGRSAERVSSWSIFWAEWCGPCHRVAPILEDVARAHAAALRLGK
                     LNVDENPRTAERFQVTSIPTMLLFKSGKLVDGIVGAVPRPQIEAIVKRWS"
BASE COUNT          317 a          545 c          576 g          290 t
ORIGIN      
        1 ctggggggac gtcgatgccg agcgcatgcg ggttggcatt tcgtgggccg aactgtccaa
       61 agcttacggc tatgctcaag ttcccagcac gtatggagga catacctacc tcaagcaggg
      121 ctacctcgac aaacgcgttt gtccgtctag ggacgcggtt cgaaaaatcg cttctctgct
      181 cggttccgcg agcctagctg caatcgccag gtcgaacatt tactgggacg aggtcgactc
      241 gataaccttc ggcggcaggg aggatgtgtt cgacatcgag gtcgacggaa gccacaactt
      301 catcgcagag ggggttctcg tccacaattc gacggtcgct gcgaatcttg ccgtcgtgct
      361 cgcggaggat ggctcggcgg gcatcgtcga tgccgacgtc acggggcccg acatcccgat
      421 cctgatgggc gtccaggacg cgcaggtgaa ggcgacggaa accgggatgg agcccaccgt
      481 cgggcccgcg ggcgtcaagg tcatctcgat ggcgcagctg atcgatcgcg acaccgcgat
      541 cgtgtggcga gggcctctga agatcaaggc gctgaagcag atgctctccg acgtggagtg
      601 gggggacctc gattacctgg tcatcgatct tccgccagga acgagcgatg aaccgctcag
      661 tgttgcgcag gagatccccg acgcggacgg cgcggtcgtc gtgacgacgc cccaacaggt
      721 atccctcctc gacgtccgca agtcgatcgc ctttgcgaag gccgtgaaga tggacatcct
      781 cggcgtcatc gagaacatga gcggcttcgt ctgtccgcat tgcggcaagg agacggacat
      841 cttcaaggtc ggcggcggcg aggcggccgc gaaggagctc ggactcccgt tcttgggtcg
      901 cataccgctg gaccctcgga tcgtcatcgg aggcgacgtg ggcaagccgt tcgtcctcga
      961 gcatccggat tccgaggccg cgaaagcgtt tcgggccatc gtgaagaatc tgaagccgca
     1021 cctcaaggaa gcgaggccgc gtcccaccgg accactggtg aagtgacgat tcggtcccgc
     1081 ggtcctcccg cggcgcgggg cgagggacgg ctcttcgtgg ccgccgtcac gaccagcgct
     1141 tgacgattgc ttcgatctga ggtcggggaa ccgcgccgac gatgccatcg accaacttcc
     1201 cactcttgaa caggagcatc gtcggaatcg acgtgacctg gaaccgctcc gcggtgcgcg
     1261 gattctcgtc gacgttcaac ttcccgagac ggagggccgc cgcatgggcc ctcgcgacgt
     1321 cctcgaggat tggagcgacc cgatggcacg ggccacacca ttcggcccag aaaatcgacc
     1381 aggaggagac ccgctcggcc gacctcccca tcgaacgtgg cgtcggtgag ctggagcggg
     1441 ccggtccatg ccgcagcaac cggattcggt ccggccgcgg ccatgagctc ccgcagcttg
     1501 cgggctcgga tcgccgcgag ctccgggtcg tccatcgagg cgcgcacacc gacagcccga
     1561 taaaagggtt tgtcgcccct atcgggcaac cttcgccacg gggccgaact cctccgcgag
     1621 cgggccgagg agtcgcacct cgcgacggat gagcgcgatc tcgcgttcgt tgaaggcggt
     1681 cgggtcgaat gggacgacga ggacggcctc ccgcatcgcg acggactc
//
LOCUS       DATLMA010000487         2953 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_226942, whole genome shotgun sequence.
ACCESSION   DATLMA010000487 DATLMA010000000
VERSION     DATLMA010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226942"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..1672
                     /locus_tag="VNA10_06225"
     CDS             326..1672
                     /locus_tag="VNA10_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37311.1"
                     /translation="MLLALVSTAPEEGEKSAASPKSAARARGSSVREATELEKFFQLN
                     PEEKFDLEATNRIDAPKLVEEARGDKRVLREVLRTAEALLPRVRAETEDPLLVSAILR
                     NKTMDWVRRSPSESSWEDTMPLRWGGIFYESRVPGGRLCRKLSTRLAGLITLCVEASG
                     AVAFLRAGVTGLFRGSAMMAKIVQFGLSSKRPRHVQQVAQAYLDDLAANRCAGKQPLP
                     LERLSEVARRNGSAEVNITLVELFSQEGTGTLIVMDPRFHPGMDPVTIRVVSPKTQDD
                     AATYDLVHGGVRAAHESAASEDAAPEATTASPWERSDMTKKEWLGMFKSLAKRKERLE
                     APPRENSRDRESYIGLRDLVLADASVRRAFLVVHWKGRPSGLALLGQLLSAGTLVPEF
                     DTDADYLEAELDHLGQGHAEHRSKDGQWKLAHGWTVVREAADGNARTYRASGKSAD"
     gene            complement(1642..2505)
                     /locus_tag="VNA10_06230"
     CDS             complement(1642..2505)
                     /locus_tag="VNA10_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37312.1"
                     /translation="MAPAESGRGASDGDVVEFDHWIYGVVPSVGYTTKAVSHGLDAGL
                     YDPYLRGHYTPIRAAAAATAEDEVDLHMIHPLRTGRELLLSRISRGIPDEAGRPTFTN
                     HTVIARTDVLRSGRTSLDGIFRSVKAFDAKAGADIPAQMPLLKVAARPETEGPHRFGN
                     GIHKHLTFPAIETLATRIMTDPASRTLLLCRNTTPEARKATLNLVFELLAWGCGLPLM
                     TAISEAPRSSALNFFNLVVAPRGARADSTWAILESALSESVLPRVLDRDEVYQVLTAT
                     VRQSADLPLAR"
     gene            complement(2517..>2953)
                     /locus_tag="VNA10_06235"
     CDS             complement(2517..>2953)
                     /locus_tag="VNA10_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37313.1"
                     /translation="PKIYPVFVLSKFDTLRDDVLARLGLHRGFPDNNRARKEYAEALL
                     RVFVPQTLSQIRGGKVAGVSMDKSAYFLSWVRTETHEGMDPVGQSKIVRTGFAPEGGG
                     EPDFSYDEYVNFIEHFRDIAHKIPDEILEAERFQAQVMARSA"
BASE COUNT          549 a          896 c          972 g          536 t
ORIGIN      
        1 gacatgtctt gcgatcctat gcaacggacg cgaaaggcaa tcggcagccc gatgtcggcc
       61 gatggaatcg atacggttat gggaacaatg ccgcgcaggc cgttgccgtc accgtgcagt
      121 gatcgcaaga agtgcaaaac ggcgatgccc tcggggtgac gcaaagccga atgttcccgt
      181 gggtggtccg acagcgggaa aagcagcgcg cgaagagcgc acggccgcct atcacggccg
      241 ataattaccg gcgacgggtt tatcgaaccc ggtgtggctc ggtttcacca gatctatggg
      301 ttgcgtgcct ttcgcagcgt cagcggtgct cctggccctc gtgtcgacgg cgcccgagga
      361 gggtgagaag tccgctgcct ccccgaaatc ggccgcgcga gctcgcggga gctcggttcg
      421 ggaagccacc gaactcgaaa aattctttca gctgaatccg gaggagaagt tcgatctcga
      481 ggccacgaat cgcatcgacg cgccaaagct cgtcgaagag gcccgggggg acaagagggt
      541 cctacgcgaa gtcttgcgaa ccgccgaagc cttgcttccc cgagtccgcg cggagacgga
      601 ggacccgctc ctggtcagcg cgatcctccg caacaagacg atggactggg ttcgtcgcag
      661 cccgtccgaa tcgagttggg aggacaccat gccgcttcgc tggggcggga tcttctacga
      721 gtcgagggtc ccgggcggcc ggttatgccg gaagctctcc acgcgactgg cgggcctcat
      781 caccctttgc gtcgaggcga gcggtgcggt cgcatttctc cgtgcgggag tcaccggctt
      841 gtttcgaggc tcggccatga tggcgaagat agtgcaattt ggactcagct ccaagcgacc
      901 ccgtcatgtg cagcaggtcg cccaggcata tctcgacgat ctcgcggcaa accgttgcgc
      961 cgggaaacaa ccgcttccgc tggagcgcct cagcgaggtc gcgcggcgga acggatcggc
     1021 ggaggtgaac attacgctgg tcgagctctt ctcacaagag ggtaccggga cgctcatcgt
     1081 gatggacccg cggttccatc cggggatgga cccggtgacg attcgcgtcg tttctccgaa
     1141 gacccaagat gacgcggcga cctacgactt ggtccacggc ggagtccgcg cggcacatga
     1201 gtccgctgct tccgaagacg cggcgcccga ggcgaccacc gcctcgccct gggagcgatc
     1261 ggacatgacg aagaaagaat ggctcgggat gttcaagtct ctcgccaagc ggaaagaacg
     1321 gctcgaggcg cctccacggg aaaattcacg agatcgcgaa tcgtacatcg ggctccggga
     1381 cctggttttg gccgacgcct cggtgcgccg agcctttctc gtggtccact ggaaaggcag
     1441 accgagtggc ctcgctcttc tggggcagct tctctcggcc ggcacgctcg ttccggagtt
     1501 cgacacggac gcggactacc tcgaagcgga gttggaccat ctcggccaag gccacgcgga
     1561 gcatcgatcc aaagacggtc agtggaagct cgctcacgga tggacggtgg tccgtgaagc
     1621 ggccgacggg aatgcacgca cttatcgggc cagcggtaag tcggcggact gacggaccgt
     1681 cgcggtcaat acctgataga cctcgtcccg atcaaggacg cgaggtaaca cagattcgct
     1741 cagtgcgctc tcgagaatgg cccatgtcga atcggcccgg gcgcccctcg gcgcgacgac
     1801 cagattgaag aagttgagcg cggaggagcg cggtgcttcg ctgatcgcgg tcatcagcgg
     1861 cagtccgcag ccccaggcca agagctcgaa caccaggttc aacgtcgcct ttcgggcttc
     1921 cggtgtcgtg ttgcggcaca ggaggagcgt gcggcttgcc ggatccgtca tgatgcgggt
     1981 ggccaaggtt tcgatcgcgg ggaatgtgag gtgcttgtga atcccattcc cgaatcggtg
     2041 cggtccttcc gtctcaggcc gcgccgcgac tttgaggagc ggcatctggg ctggaatgtc
     2101 ggcgcctgcc ttcgcgtcga acgctttcac cgaacgaaag atcccatcga gcgaggtccg
     2161 gccggaccgg aggacatccg tccgcgcgat gaccgtgtgg ttcgtgaagg tcggtcgccc
     2221 cgcttcgtcg ggaattcctc ggctgattcg agagagcagg agttcccggc cggtcctcag
     2281 cgggtgaatc atatggagat cgacttcatc ctccgcggtt gccgcagccg ccgcgcggat
     2341 cggtgtgtaa tgcccgcgga ggtagggatc atagaggccc gcgtcgagtc catgggagac
     2401 ggctttcgtc gtgtatccga cgctgggcac gaccccgtag atccaatggt cgaactcgac
     2461 gacgtccccg tccgatgccc ctcgaccgga ttctgctggc gccatggtgc agcctactag
     2521 gccgaccgag ccatgacctg agcctgaaac cgctctgcct cgaggatttc gtcggggatc
     2581 ttgtgtgcga tgtctcggaa gtgctcgatg aaattgacgt actcatcgta cgagaaatcc
     2641 ggttcgcctc cgccttccgg agcgaaaccg gtccgcacga tcttggattg cccgacggga
     2701 tccattcctt catgcgtctc cgtccggacc cagctcagga agtatgccga cttgtccatg
     2761 ctcaccccgg cgaccttgcc gccgcggatc tgagagaggg tttgcgggac gaagacccgg
     2821 agcaacgcct cggcatattc cttccgggca cggttgttgt ctgggaaccc gcggtgcaag
     2881 ccgagtctcg ccaggacgtc atcccggagc gtgtcgaact tggacagcac gaagacgggg
     2941 tagattttcg ggg
//
LOCUS       DATLMA010000488         3274 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_527829, whole genome shotgun sequence.
ACCESSION   DATLMA010000488 DATLMA010000000
VERSION     DATLMA010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527829"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VNA10_06240"
     CDS             <1..545
                     /locus_tag="VNA10_06240"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="catalyzes condensation of pyruvate and acetyl-CoA
                     to form (R)-citramalate; functions in isoleucine
                     synthesis; belongs to the alpha-IPM synthetase/homocitrate
                     synthase family; it is difficult distinguishing these
                     proteins from enzymes in that family; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HVG37314.1"
                     /translation="CVNGLGERSGNASFEELVLTLEALYGYDTGIDISRIYELSQLVE
                     TLSGIPVGMHQPLVGHNAFAHESGIHAHGVIKHTATYEPMQPEKLGRERTFVFGKHTG
                     SLAVAEKLRGRGVEATPEQVSVLVKLIKDFAEARSKGDQQAFVASFRDRAERRRGLTD
                     DEFWTLAQKAGLGRPKTAAK"
     gene            complement(552..1508)
                     /locus_tag="VNA10_06245"
     CDS             complement(552..1508)
                     /locus_tag="VNA10_06245"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HVG37315.1"
                     /translation="MATSSTRSAAFVMLCIIWGSTWLAIRIGLEGAPPFLSASLRFVV
                     AAVVLLVLAVVFRSKWPQNRTEWALVGFVGVVLFTADYGLIYWGENNGVPSGLSAILF
                     ATFPLQTALVANAFLKSERLTVQKLLGIGVGFGGVVLIFRSQLGTAGPEKVFPMLSIV
                     LGATCAAFATVAVKRWGHDTEPITFNAASMAVGAAALAGVSLIAREPWAVPTWPQGLG
                     AILYLAIAGSVVTFVAWQWLLKGMPATSLSYIALIIPIVAVLLGASLGNETFDVTDLA
                     GAGIVLLGIYVSTSRRAAAFARTAMEQGIADPDPIDPPPRKT"
     gene            1601..2857
                     /locus_tag="VNA10_06250"
     CDS             1601..2857
                     /locus_tag="VNA10_06250"
                     /inference="COORDINATES: protein motif:HMM:NF001614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HVG37316.1"
                     /translation="MTGQTMSEKVLARASHAESVRPGQIIDGDVDLLYMHEMLAMALL
                     PFNEIGTMKVWDPEKIVVTLDHWVPPPTPEIAKMHQTIRDFCRKQGIRRFHDVGDHGI
                     VHQLIAERGYAHPWDLVIGSDSHTNMVGAVGAFAAGIGATDTAAVMAKGQLWLRVPET
                     MRVDIRGTLGERTGAKDVILKVIGTTGDDAARYAAVEFTGETVDAFPMNERFVLCNMT
                     TEMGAKVGMIAADDVTKDYLAHSGARFEPIRSDDDATFVKTFAFDVDGMGPQVACPSN
                     PANLKPVEDVAGTKIDVAFLGSCTNARIEDLRIAAELLRGEKVAPGVRFQITPASQII
                     YRQALKEGLVEVFMDAGATFTSSTCGPCFGGHMGTLAGDEVCISSTNRNYPGRMGSPT
                     AQVYLASPWTVTASAIHGEITDPRKV"
     gene            2863..>3274
                     /locus_tag="VNA10_06255"
     CDS             2863..>3274
                     /locus_tag="VNA10_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011305283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase"
                     /protein_id="HVG37317.1"
                     /translation="MQTRFQGRAWTFGDDISTDHIIAGKYLGTTDPKVFAEHAFEAVD
                     PTWAKNVRPGDMIVAGANFGCGSSREQAPVALKTLGISAILANSFARIFFRNAINLGF
                     PVVECAGLRDRVKSGDVIELNLAAGEVRTPSGGMF"
BASE COUNT          624 a         1040 c         1101 g          509 t
ORIGIN      
        1 cctgcgtgaa tgggctcggg gaacgctccg ggaatgcgag cttcgaggag ctcgtcctaa
       61 cgctcgaggc gttgtacggc tacgacacgg ggatcgacat ctcgaggatc tacgagctgt
      121 cccaactcgt cgagacgctg agcgggatcc cggtcgggat gcatcaaccg ctcgtgggcc
      181 acaacgcgtt cgcccacgaa tccggcatcc atgcacacgg cgtgatcaag cacaccgcga
      241 cgtacgagcc gatgcaaccg gagaaactgg ggagagaacg cactttcgtg ttcggaaaac
      301 acaccgggtc cctcgccgtc gccgagaagc tccgcggccg cggggtcgag gcgacgccgg
      361 aacaggtctc ggtcctcgtc aagctgatca aggatttcgc cgaagcgcga tcgaagggag
      421 accagcaggc attcgtcgct tcgttccgcg accgagccga gcgcaggcgc ggcttgaccg
      481 atgatgagtt ctggacgctg gcccagaagg ccggcctcgg ccggccaaag accgcagcga
      541 agtgaggcgg ctcaggtctt ccggggcggt gggtcgatgg gatccgggtc ggcgatccct
      601 tgctccatgg ccgtgcgggc gaaggcggcc gctcggcggg acgtcgagac gtatattccc
      661 aggaggacga tccctgcgcc tgcgaggtcg gtgacgtcaa acgtctcgtt gccgagactc
      721 gccccgagca ggacagcgac aatcgggatg atcagcgcga tgtacgagag ggacgttgcc
      781 ggcatcccct tcaggagcca ttgccacgcc acgaacgtga cgacggagcc ggcgattgcg
      841 aggtagagaa tcgctccgag gccctggggc cacgtcggta cggcccacgg ctcgcgggcg
      901 atcagggaga ccccggccag ggccgccgca ccgaccgcca tcgacgcggc gttgaacgtg
      961 atcggttccg tgtcgtggcc ccagcgtttc accgccaccg tcgcaaacgc ggcgcacgtc
     1021 gcgccgagga cgatcgacaa catggggaac accttttccg gacctgcggt ccccagctgg
     1081 ctccggaaga tgaggacgac gccgccgaag cccacgccga tcccgagcag tttctggacg
     1141 gtcaaccgct ccgacttcag gaaagcgttg gccaccaggg cggtctgaag aggaaatgtc
     1201 gcgaacagga tcgccgacaa gccgctgggc accccgttgt tctcgcccca gtagatgagg
     1261 ccgtagtccg cggtgaagag cacgaccccg acgaatccga ccagggccca ctcggtccgg
     1321 ttctgtggcc acttcgatcg gaatacgacc gcgagcacga ggagcacgac cgcggcgacg
     1381 acgaatcgta aggacgcgga caagaacggt ggcgcgcctt cgaggccgat tcggatcgcg
     1441 agccaggtcg agccccagat gatgcacagc atgacgaatg ccgcgctacg cgtggaactc
     1501 gtggccatcg gctcggccat tgcgaccgtc tcgtaaagcc ttggggccgt ccatggccat
     1561 gtttataggt cgcgccgcac ctgtgcatcc accgattccg atgacaggcc agacgatgtc
     1621 ggagaaggtc ctcgcgcgcg cgagccacgc cgagtccgtg cgcccgggcc agatcatcga
     1681 cggggacgtc gacctcctgt acatgcacga gatgctggcc atggccctgc ttccgttcaa
     1741 cgagatcggc acgatgaaag tctgggatcc cgagaagatc gtcgtgacac tcgatcattg
     1801 ggtccctccg ccgacgccgg agatcgcgaa gatgcaccag acgatccggg atttctgccg
     1861 gaagcaaggc atccggcggt tccacgatgt cggggaccac ggcatcgtcc accaactgat
     1921 cgcggaacgc ggctatgcgc atccgtggga tctcgtcatc gggagcgaca gccacacgaa
     1981 catggtcgga gccgtcggag cgttcgcggc ggggatcggc gcgacggaca cggcggccgt
     2041 gatggcgaaa ggccagctct ggctccgcgt gcccgagacg atgcgcgtcg atatccgcgg
     2101 cacgctcggc gagcgcaccg gcgcgaagga tgtcatcctg aaggtgatcg gcacgacggg
     2161 agacgacgcg gcgcggtacg cggcggtcga gttcaccggt gagacggtcg atgcgttccc
     2221 gatgaacgag cggttcgtac tgtgcaacat gacgaccgag atgggggcga aggtcgggat
     2281 gatcgcggca gacgacgtga cgaaggatta cctcgcccac tcgggtgccc gattcgagcc
     2341 gatccggtcc gacgacgatg cgacgttcgt gaagacgttc gccttcgatg tcgacgggat
     2401 gggcccgcag gtcgcatgtc cgtcgaatcc cgcgaatctc aaacccgtcg aggacgtcgc
     2461 ggggacgaag atcgacgtcg cgttcctcgg ctcgtgcacg aacgcccgga tcgaagatct
     2521 tcggatcgcc gcggaactcc tgaggggcga gaaggtcgca cccggcgtgc gcttccagat
     2581 cacacccgca tcgcagatca tctaccgcca ggcgctcaag gagggcctcg tggaagtctt
     2641 catggacgcg ggcgcgacgt tcacgtcgtc cacatgcggg ccgtgcttcg gcggccacat
     2701 gggcacgctc gcgggcgatg aggtctgcat ttcctcgacc aaccgaaact accccggccg
     2761 aatgggttcg ccgaccgcgc aagtgtatct cgcgagcccg tggaccgtga ccgcgtcggc
     2821 catccacggg gaaatcacgg acccgcggaa ggtctagccg tcatgcaaac gcgattccag
     2881 ggccgcgcat ggacgttcgg agacgacatc tccacggatc acatcattgc gggcaagtat
     2941 ctcgggacga ccgatccgaa ggtgttcgcg gagcacgcgt tcgaggccgt cgatccgacg
     3001 tgggcgaaga acgtccggcc cggagacatg atcgtcgcgg gagccaactt cggttgcggt
     3061 tcgagccgcg agcaggcgcc ggtcgcattg aagaccctcg gcatctccgc gatcctcgcg
     3121 aactcgttcg cgcgcatctt cttccggaat gcgatcaatc tcgggttccc ggtggtcgag
     3181 tgcgcaggcc tccgcgaccg cgtgaagtcc ggcgacgtca tcgagctgaa tctcgccgcc
     3241 ggcgaggtgc ggactccatc cggtgggatg ttca
//
LOCUS       DATLMA010000489         2035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_348630, whole genome shotgun sequence.
ACCESSION   DATLMA010000489 DATLMA010000000
VERSION     DATLMA010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348630"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VNA10_06260"
     CDS             <1..351
                     /locus_tag="VNA10_06260"
                     /inference="COORDINATES: protein motif:HMM:NF020253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HVG37318.1"
                     /translation="LLEEQRRGPARRTVGLQIDWQTVERFYRDMGLPPQPPAEPWREK
                     VPLYSGYRQIGWATSGCWSPLLKRYIAIATVASPYSRPGTRIEIEVAVEWERHRAPAT
                     VVERPFFEPERKKA"
     gene            396..1958
                     /locus_tag="VNA10_06265"
     CDS             396..1958
                     /locus_tag="VNA10_06265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HVG37319.1"
                     /translation="MTSTDAIIVGGGHNGLVAAAYLAKAGLKVLVLERRPMVGGACVT
                     EEIHPGFRASTLAYTCGLLRPEIKADLDLPAFGLDEHVHDPSVFHPFPDGRFLLYRND
                     EESNRKQIAKFSKKDAAAWSRYTHFWDEFAELVEPTLLAPPVSLADLASLVRTPEAED
                     FLRRIIFSSIADMLDEFFESEEVKASLATSAVAGTMAGPRTPGTAFVLGHHSLGNIGG
                     VKGVWGWSRGGMGGISEAIAAAARHYGARIRTDAEVTRIVTVDGRAVGVTLADGTQID
                     ARVVLSNADPKRTFLRLVRAEDLPVEFARAIARIRFESSSFKLHLALRELPDFRAIPG
                     LTVQAHHKTIIDLAPSMDYLERAYDDAKRGRPSRDPFLEFVIESAYDPTAAPPGMHTL
                     TISAKFAPFDLANGSWDAESSRFADRIIETLAQYAPNISRAIVATHWRSPLTMETEYG
                     LTRGDVFHGAILPYQMFSFRPIPGWSSYRTPVRGLYLCGAGAHPGGGVIGAAGHNAAM
                     AVLEDWPRLRSA"
BASE COUNT          339 a          661 c          663 g          372 t
ORIGIN      
        1 ctcctcgagg aacagcggcg cggtcccgcc cggcgcacgg tcggccttca gatcgactgg
       61 cagaccgtgg agcgtttcta tcgggacatg ggtcttccac cacagccacc cgccgaaccg
      121 tggcgggaga aggtgccgct gtactccggc taccgtcaga tcggttgggc cacgagcggt
      181 tgctggtcac cgctgttgaa gcggtacatc gcgatcgcga ccgtcgcctc cccgtattcg
      241 cggcccggaa cccgcatcga gatcgaggtg gccgtcgagt gggagcgaca ccgggcaccc
      301 gcgaccgtgg tcgaacgacc gttcttcgag ccggagcgaa agaaagcctg aaccgcgcgg
      361 caatccttta tcgagtccgc ggttacggcc tggccatgac gtccacggat gcgatcatcg
      421 tcggtggagg tcacaacggt ctcgtcgcgg ccgcgtacct cgcgaaggcc ggcctcaagg
      481 tgctggtcct cgaacgccgg cccatggtcg gcggcgcttg cgtcacggaa gaaattcatc
      541 ccggattccg tgcatcgacg ctcgcctaca cctgcggcct cctgcgcccc gagatcaagg
      601 ccgatctgga cctcccggcg ttcggactgg acgagcacgt gcacgatccg tccgtcttcc
      661 atccgttccc ggatggccgg ttcctactct accggaacga cgaggagtcg aaccggaagc
      721 agatcgcgaa gttctcgaag aaggacgcgg cggcctggtc ccggtacacg catttctggg
      781 atgagttcgc ggaactcgtc gagccgacgt tgctcgcccc gccggtctcg ctcgcggacc
      841 tcgcatcgtt ggtccgaact ccggaggcgg aggacttcct gcggcgaatc atcttcagct
      901 ccatcgcgga catgctcgac gagttcttcg agtccgagga ggtcaaggcg tccctcgcga
      961 cgagcgcagt cgccggaacg atggcagggc cgcggacccc cggaactgcc ttcgtgctgg
     1021 ggcaccattc gctcggaaac atcggaggcg tgaaaggagt ctggggttgg tctcggggtg
     1081 ggatgggagg gatttccgag gcgatcgccg ccgcggcccg ccactatggg gcgcggattc
     1141 ggacggacgc ggaggttacc cggatcgtca cggtcgacgg acgagcggtc ggggtcacct
     1201 tggcggacgg aactcaaatc gatgcacgcg tggtcctgag caacgcggat ccgaaacgga
     1261 ccttcctccg gctcgtgcgc gcggaggacc ttcccgtgga gttcgcgcgt gcgatcgcgc
     1321 gaatccgatt cgaatcatcg tcgttcaagc tccatctcgc gcttcgcgag ctacccgact
     1381 tccgcgccat tcctgggttg accgtccagg cccatcacaa gacgatcatc gatctcgcac
     1441 cctcgatgga ctacttggag cgggcatacg acgacgcgaa acggggccgg ccgtcgcggg
     1501 acccgtttct cgagttcgtg attgagtcgg cgtatgaccc gacggccgcg cctccgggga
     1561 tgcacaccct cacgatctcg gcaaagttcg cgcccttcga tctcgcgaac ggatcgtggg
     1621 acgccgaatc gagccgcttt gccgaccgaa tcattgagac cctggctcag tacgccccga
     1681 acatttcccg cgccatcgtg gcgacccact ggaggtcccc tctgaccatg gagacggaat
     1741 atggcctgac ccggggggac gtgttccatg gggcgatctt gccgtaccag atgttctcgt
     1801 tccgtccgat tccgggatgg tcatcgtacc gcacgcctgt ccgtggtttg tacctgtgtg
     1861 gggccggcgc acatccgggc ggtggggtga ttggagccgc gggccacaat gccgcgatgg
     1921 ccgtgctcga ggattggccc cgcctccgat ccgcgtgagt taggcctcgc gcacctgctg
     1981 ttcatacgag ttcgagaatc cggattcgcc gctttcgagg aagttcttca gcgag
//
LOCUS       DATLMA010000490         1108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_287281, whole genome shotgun sequence.
ACCESSION   DATLMA010000490 DATLMA010000000
VERSION     DATLMA010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287281"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..>1108
                     /locus_tag="VNA10_06270"
     CDS             92..>1108
                     /locus_tag="VNA10_06270"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HVG37320.1"
                     /translation="MNSVGSTAVVAVLILSALVGVIMIGSTHARAAAPFRSLTVGLVS
                     MNIVTYNPMAITLLDEFVVVYNVYSTLVTYDGNYHVRPDLASSWNLSTDQKTWTFNLV
                     HNAFFTDPTNPGDRSHPVTSDDVLFTFTLNQQQTGSILHSYTTNIASMSAPDPYTFTL
                     TTNQPFAAIYSTASAISILPKYVWATINNPVHYGNTNPIGSNAMYYDTLNATFGSNII
                     LRRSPNYYGVATYCQVSRPDQVYFKDYTSGATMVSDFQSGTSGLDAIMSIDPASYLNA
                     LPPNSPGGKTTKFAVDTGFVGEVSINVMTPAIRAAYSQFRNGANNPLLLNYTVRTAIA
                     MSINK"
BASE COUNT          225 a          370 c          318 g          195 t
ORIGIN      
        1 gcaggggctc agatggtgcg ccgttgcctc cgaggacggg gggttgacgg acgtgcttcg
       61 aggaggaggg caccggagtg gccgggcgtg ggtgaactca gtcggatcga ccgccgtggt
      121 cgccgtcttg atcctgtcgg ccctcgtcgg cgtcatcatg atcggctcga cccacgcgcg
      181 ggccgcggcc ccattccgga gcctcacggt cgggctcgtg agtatgaaca tcgtgacgta
      241 caacccgatg gcgatcacgc tcctcgatga gttcgtcgtc gtctacaacg tctacagcac
      301 cctcgtcacg tacgatggca attaccacgt gaggcccgat ctggcctcca gttggaatct
      361 gtccacagac caaaagacct ggacgttcaa cctggtccac aatgctttct tcacggaccc
      421 cacgaatccc ggcgaccgga gtcacccggt cacctccgat gacgtgctct tcacgttcac
      481 cctcaaccag caacagaccg ggagcatact gcactcgtac acgacgaaca tcgcgagcat
      541 gagcgcgccc gatccctaca cgttcaccct gacgaccaac cagccgttcg cggcgatcta
      601 ctctaccgcg agcgcgatca gcatcctgcc gaagtacgtc tgggcaacga tcaacaatcc
      661 cgttcactat ggaaacacca acccgatcgg ctcgaacgcg atgtattacg acaccctgaa
      721 cgcgaccttt gggtcgaaca tcatcctccg gaggagcccg aactactacg gcgtggccac
      781 gtactgccaa gtgtcccggc cggaccaggt ctacttcaag gactacacga gcggggcgac
      841 gatggtctcc gacttccagt cggggacgag cggcctggac gcgatcatgt cgatcgatcc
      901 ggcgtcgtac ctcaatgcgc tgcctccgaa ctcgccgggt ggcaagacga cgaagttcgc
      961 ggtggacacc gggttcgtcg gtgaggtctc catcaacgtg atgacgccgg cgatccgggc
     1021 ggcctattcc cagttccgga acggcgcgaa caacccgctc ctcctgaact acacggtccg
     1081 gacggccatc gcgatgagca tcaacaag
//
LOCUS       DATLMA010000491         1471 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_46122, whole genome shotgun sequence.
ACCESSION   DATLMA010000491 DATLMA010000000
VERSION     DATLMA010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46122"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(333..920)
                     /locus_tag="VNA10_06275"
     CDS             complement(333..920)
                     /locus_tag="VNA10_06275"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG37321.1"
                     /translation="MAGREFEKSYATGDTPWDSGRPSAELVRVLDAGLLPGKTILEIG
                     CGTGTNAIELARRGYQVTAVDLVDLAVRRAKDKAQRAGVDIDFRVGDMTRMDLGGPFD
                     VVFDRGVYHGIRARNLSGFLKMLKRVTRPGSRWLTLAGNAKEPMADGPPVVSEDEFRS
                     ELEPLFKILEVREFRFTLDREDFRPLAWSILMERR"
     gene            1038..>1471
                     /locus_tag="VNA10_06280"
     CDS             1038..>1471
                     /locus_tag="VNA10_06280"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HVG37322.1"
                     /translation="MTKGPPRAELEARTKASRAYADRARRSLPGGVTAGVKYFDPYPI
                     VMKKAKGCRLWDLDGNEYVDYCLSFGPLVLGHGHPRVMKAIRDSLQSAGTTMFGTPHE
                     LEATYAERILRIFRPDGRMRFTMSGTEATLHAVRLARAYRNRP"
BASE COUNT          283 a          491 c          458 g          239 t
ORIGIN      
        1 aaccggggga tcatcccgat ggccacgggt cccgacgagc aatggacctc ctcggtcgcg
       61 cacaccaaag cggacgtcgc gcggcacctc gacgccttcg aggaggtcgc ggagagcatg
      121 aagcgcggtc gagccgagat gtcgctcgtc gaagcggtct gagggctaga ggagagcggt
      181 gattcggacg ccgcgtcgca agtacgggcg catgatcaag cctcttcccg tgatgaagcc
      241 ggagaagtgc cggttctgca aggccggcag gccatgcccg attcacaagc aagaaaatac
      301 ggcttctccg cgatgacgag acgctccgcc catcatcgcc gttccatcag gatggaccaa
      361 gcaagaggcc ggaagtcctc gcggtccaac gtgaaccgga actcgcggac ttcgagaatt
      421 ttgaacagcg gctccaactc ggaccgaaac tcgtcctcgc tcacgacggg cggaccgtcg
      481 gccatcggct ccttcgcatt ccctgcgagg gtcagccacc gcgagcccgg ccgggtgacg
      541 cgtttgagca tcttcaggaa acccgagaga ttccgcgcgc gaatgccgtg gtagacccct
      601 cggtcgaaca cgacatcgaa cggtccaccg aggtccattc gcgtcatgtc gccgacgcga
      661 aagtcgatgt cgacccccgc ccgctgcgcc ttgtccttcg cacggcggac tgcgagatca
      721 acgagatcga ccgccgtcac ttgatacccg cgtcgcgcca attcgattgc gttcgtgccg
      781 gtcccgcatc cgatctcgag gatcgtcttg ccgggcaaca agccggcgtc gaggacacgg
      841 accagttccg cgctcgggcg ccccgaatcc caaggcgtgt cgcctgtcgc atacgatttc
      901 tcgaactctc gaccggccaa tcggactccc ccgtcaacct cgagatgccc atggaccgac
      961 ggataataag gtcaagcctt tccaagccgc gcggcctgcg cgaagactat atcgaccgac
     1021 gtcggatgcg tccacagatg acgaaaggcc ctccgcgcgc cgagctagag gcgcggacca
     1081 aggcttcccg tgcgtatgcg gatcgggcac ggcgctccct gcccggtggc gtcacggcgg
     1141 gcgtgaaata tttcgatccg tacccgatcg tgatgaagaa ggcgaagggc tgccgccttt
     1201 gggacctcga cgggaacgag tacgtcgact actgcctctc cttcggtccg ctcgtcttgg
     1261 gccacggcca cccgcgcgtg atgaaggcga tccgggacag cctgcagtct gcggggacca
     1321 cgatgttcgg cacgccccac gaactcgaag cgacgtatgc ggaacgcatt ctccggatct
     1381 tccggccgga cggccggatg cggttcacga tgtccgggac cgaggcgacg cttcatgcgg
     1441 tccgactggc gagggcctac cgcaaccgtc c
//
LOCUS       DATLMA010000492         1365 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_168873, whole genome shotgun sequence.
ACCESSION   DATLMA010000492 DATLMA010000000
VERSION     DATLMA010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168873"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VNA10_06285"
     CDS             <1..183
                     /locus_tag="VNA10_06285"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37323.1"
                     /translation="VDLKDQVQISEDDMVQAARAYDSPFHFTSAKAGVNVENAFQSLA
                     ERVAKERYARKVLPEE"
     gene            246..803
                     /locus_tag="VNA10_06290"
     CDS             246..803
                     /locus_tag="VNA10_06290"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG37324.1"
                     /translation="MMATSTMAGQKHLKAKVCLVGDVAVGKTSLIKRFVQDQFEDRYI
                     ATVGTKVTKRSIDVMWKGAPATLDIMVWDIMGEKGFRALLRDAYFEGSQGVIAVCDLT
                     RKDTFYDLNNWVQMIRKQVGNVPMVFLGNKMDLTERLVVSQEELARMGSIHSAPQFLA
                     SAKTGAGVAEAFRALADAIGNRGNE"
     gene            920..>1365
                     /locus_tag="VNA10_06295"
     CDS             920..>1365
                     /locus_tag="VNA10_06295"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG37325.1"
                     /translation="MDRQKMKVKICLVGEGAVGKTCLIRRFIQDQFDDRYISTLGAKV
                     SKKEIKVDGPNGGMDVDMTIWDIMGEKGFRELLKEAYFHGAQGVLAVCDATRKETLDE
                     LEDWVAAVVKVTGNIPMEFLANKTDLKNQMTVTKADVQSAAESHDAP"
BASE COUNT          314 a          392 c          436 g          223 t
ORIGIN      
        1 gtcgacttaa aggaccaggt ccagatcagc gaggacgaca tggtccaggc cgcccgcgcc
       61 tacgacagtc cgttccactt cacgtcggcg aaggccggcg tcaacgtcga gaacgcattc
      121 cagtcactgg ccgagcgggt cgcgaaggaa cggtacgcgc gaaaagtgct ccctgaagaa
      181 taaaaattat caggggcgat actcgcgtct gcacggtaca taagaccgcg ctcgatgggt
      241 ggcccatgat ggcgacatcc acgatggctg gccagaagca tctcaaggcc aaggtctgcc
      301 tcgtggggga tgtcgcggtc ggcaagacct cgctcatcaa gcggttcgtg caggaccagt
      361 tcgaggaccg atacatcgcc accgtcggta cgaaggtcac gaagaggtcg atcgacgtca
      421 tgtggaaggg cgcccccgcg accctcgaca tcatggtgtg ggacatcatg ggcgagaaag
      481 ggttccgggc cctgctccgc gacgcgtact tcgagggctc ccagggcgtg atcgcggtct
      541 gcgacctcac gcgcaaggat accttttacg atctcaacaa ctgggtccag atgatccgca
      601 agcaggtcgg caacgtcccg atggtgttcc tggggaacaa gatggacctg accgagcggc
      661 tcgtcgtgag ccaggaagag ctcgcccgga tgggttcgat ccacagcgcc ccgcagttcc
      721 tcgcgtccgc gaagaccggg gccggagtgg ccgaggcgtt tcgcgcgctc gcggatgcga
      781 tcgggaaccg cggaaacgag tgacgtcagt cgaggccttg gcgctcagaa gccccgccat
      841 tatctcgata gataaccgat gggcaacgcc tttataacct gagacgtgtg cgagcgacgc
      901 atcggctcca gggattctga tggaccgcca aaaaatgaaa gtcaagatct gcctcgtcgg
      961 ggagggcgcg gtcggcaaga cgtgcctgat ccgcaggttc attcaggacc aattcgacga
     1021 ccgatacatc tccaccctcg gggcgaaggt ctcgaagaaa gagattaagg tcgacggccc
     1081 gaacggcggc atggacgtcg acatgacgat ctgggacatc atgggcgaga aaggatttcg
     1141 cgagctgttg aaagaggcgt actttcacgg agcccaaggc gtcctcgccg tctgcgatgc
     1201 cacccgaaaa gagacgctcg acgaacttga ggattgggtc gcggcggtcg tcaaagtcac
     1261 ggggaacatc ccaatggaat tccttgcaaa caaaacggac ctgaagaacc agatgacggt
     1321 cacaaaggcg gacgtgcaga gcgccgcgga atcgcatgac gcgcc
//
LOCUS       DATLMA010000493         1188 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_227271, whole genome shotgun sequence.
ACCESSION   DATLMA010000493 DATLMA010000000
VERSION     DATLMA010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227271"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1188)
                     /locus_tag="VNA10_06300"
     CDS             complement(<1..>1188)
                     /locus_tag="VNA10_06300"
                     /inference="COORDINATES: protein motif:HMM:TIGR03491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM0106 family RecB-like putative nuclease"
                     /protein_id="HVG37326.1"
                     /translation="LSGRTPPKSEYDDFDERVDRIHVDKVRLALRSILSTEASSAVPL
                     VHEDLSTHPDALERVGKSAVVVPIRIFPRACISDLDRLRLGFDGLVIGRVHGKVPTHG
                     VAIIGPNLRKSRVALPRLVRRARRAVDALRVLASGPAPRLVLNRHCELCGFRDDCRRR
                     AVDTDDLSLMSGLKKAELAAAHKKGVFTITQFSHTFRPNRRRKRLRHEWSLQALSIRE
                     KRTHVLVPLELPSRDPGEQVLFLDVEGDTAASSYYLVGVLQVSAAGTAQHSFWADSPE
                     QEETIWQRLVDLAEGLADFRIFHYGSYETTFLRRMGQRYSAYKPAIAARLRERATNVL
                     GLIHGHVHFPTLSNGLKDIAVHLGFRWTEPGVTGLQCAFWRRRWEHEPDVRLHAAITT
                     YNAE"
BASE COUNT          229 a          356 c          393 g          210 t
ORIGIN      
        1 ctcggcgttg tacgtagtga tggcggcgtg cagccgcacg tcgggctcgt gttcccaccg
       61 acgacgccaa aaagcgcact gaagacccgt taccccgggt tcggtccacc gaaagccgag
      121 gtggacggcg atgtccttca acccgttcga gagagttggg aagtgaacgt gcccgtggat
      181 cagtccgagc acattcgtgg cacgttcacg cagccgtgca gcgatggccg gtttgtaagc
      241 cgagtaccgc tgccccatgc ggcgaaggaa ggtcgtctcg tagctcccgt agtggaagat
      301 cctgaagtct gcgagaccct cggccagatc gacaagacgt tgccagatgg tttcctcctg
      361 ctcgggggag tcagcccaga aagaatgctg cgcggtcccc gcagccgata cctgaagcac
      421 gccgacgagg tagtaggagc tggctgcggt atcgccctcg acgtccagga agaggacttg
      481 ctccccagga tcccgcgacg gcagctccag ggggacgagg acgtgggtgc gcttttcgcg
      541 aatcgagagc gcctggagcg accactcgtg gcgaagtcgt ttccggcgtc ggttcgggcg
      601 gaacgtgtgc gagaactgcg tgatcgtgaa gacgcccttc ttatgcgcgg ccgcgagttc
      661 agccttcttg agcccagaca tcaggctgag gtcgtcggta tcgaccgcgc gccgtcgaca
      721 gtcgtcgcgg aatccgcata gttcgcagtg cctattgagc acgagccgcg gggcagggcc
      781 ggatgccaga acgcgaagag cgtccacagc tctacgtgca cggcgaacga gccgtggaag
      841 ggcgacgcga gacttcctaa ggttggggcc gatgattgcg acgccgtgcg ttgggacttt
      901 tccgtggacc cgcccgatca cgagtccgtc gaaccccaac ctcagcctgt cgagatccga
      961 gatacacgct cgcgggaaga tccgaatcgg cacgaccacc gcgctcttgc caacgcgctc
     1021 caaggcgtca gggtgcgtag agagatcctc gtgaacgagc ggcacggcac tcgacgcttc
     1081 cgtagagagg atcgaacgaa gggcgagtcg aactttgtcg acatgtattc ggtccacccg
     1141 ttcgtcgaag tcgtcgtact cgcttttggg tggcgtgcgc cccgaaag
//
LOCUS       DATLMA010000494         1223 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_348908, whole genome shotgun sequence.
ACCESSION   DATLMA010000494 DATLMA010000000
VERSION     DATLMA010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348908"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VNA10_06305"
     CDS             complement(<1..471)
                     /locus_tag="VNA10_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37327.1"
                     /translation="MESRLVLAAYALLALLVAFYPAFFGELPVPATAVLTLLPGGPAP
                     PETNELADVPTEFLPWSRAVADSYRGGHLPLRFAANGCGTPLWANPQAQAVTPTTLFH
                     LVLPESWASALAAALKLFLAAAGAFFFVRSRGIGRVAAAFAGFAFGFSLFFTTWM"
     gene            complement(495..>1223)
                     /locus_tag="VNA10_06310"
     CDS             complement(495..>1223)
                     /locus_tag="VNA10_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015745103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HVG37328.1"
                     /translation="QRLSLFIDFENIALGVRDAKYKKFDIHLVLQRLIEKGRIVFKKA
                     YADWTRFPEYKREFHEAAIELIDIPQRGYTGKNSADIRMVVDAMDLVASKGHITTFVI
                     LSGDSDFSPLVSKLKENDKNVIGLGVKNSTSDLLISNCDEFIFYEDLVRETRALPSIE
                     NLPKKQQDVFRLMLDSIQALQRENYDVIWGSMIKQTMQRKQPYFNETYYGYKSFSELL
                     EDAQRKGLLTMKKDAKSGGYIVSA"
BASE COUNT          238 a          363 c          407 g          215 t
ORIGIN      
        1 catccacgtc gtgaagaaga gggagaagcc gaaggcgaac cctgcgaatg ccgcggccac
       61 ccgcccgatc ccgcgggacc ggacgaagaa aaacgctccg gccgccgcga gaaagagctt
      121 gagcgccgcc gcgagagcgg acgcccacga ctcgggaagg acgaggtgga agagcgtcgt
      181 cggcgtgacc gcctgcgcct ggggattcgc ccacaagggc gtgccgcacc cgttcgcggc
      241 gaagcgcagc ggaagatggc cgcctcgata ggagtcggcg accgcgcggc tccacggcag
      301 gaactccgtc gggacatcgg cgagctcgtt cgtctccggg ggcgccgggc cgccgggaag
      361 gagcgtcagg accgcggtgg cggggacggg aagctcgccg aagaacgcgg gataaaaggc
      421 gacgaggagg gcgagaagag cgtaagccgc gaggacgagg cgggattcca cgcgccggac
      481 gttctcagtc tccgctacgc cgaaacgatg taacccccgc tcttcgcgtc cttcttcatc
      541 gtgaggaggc ccttcctctg cgcgtcttcc aggagctcgg agaacgactt gtatccgtag
      601 tacgtctcgt tgaagtaagg ctgcttgcgc tgcatcgtct gcttgatcat cgagccccag
      661 atcacgtcat agttctcgcg ctggagggcc tggatcgagt cgagcatcag ccggaagacg
      721 tcctgctgct tcttcggaag gttttcgatc gacggcaggg cgcgggtctc gcgcacgagg
      781 tcttcgtaga agatgaactc gtcgcagttc gagatcaaga gatcggaggt cgagttcttc
      841 actccgagac cgatgacgtt cttgtcgttt tccttcagct tcgacacgag aggagaaaag
      901 tcggagtcgc ccgagaggat cacgaacgtc gtgatgtggc ctttcgaagc cacgagatcc
      961 atcgcgtcga cgaccatgcg gatgtccgcc gagttcttgc ccgtatatcc ccgctgcggg
     1021 atgtcgatca gctcgatcgc tgcctcgtga aactcccgct tgtactccgg gaagcgggtc
     1081 cagtccgcgt acgccttctt gaagacgatc cgtcccttct cgatcagccg ctggaggacg
     1141 aggtggatgt cgaacttctt gtacttggcg tcgcgtacgc cgagagcgat gttctcgaag
     1201 tcgatgaaga gagacagccg ctg
//
LOCUS       DATLMA010000495         2925 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_588247, whole genome shotgun sequence.
ACCESSION   DATLMA010000495 DATLMA010000000
VERSION     DATLMA010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588247"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /locus_tag="VNA10_06315"
     CDS             complement(<1..497)
                     /locus_tag="VNA10_06315"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HVG37329.1"
                     /translation="MMLDPSSLPEKDSYRLMISAFVPRPIAFVSTRSLAGINNCAPFS
                     YSMGVSSRPMVLALSVGERDGRPKDTARNILDTREFVVNMVTEAIAEKMNVASGDYAA
                     HISEFEEAGLTPVASDAVRPPRIAESPVNFECRLIRAITVADNTVFFGEAIRLHVDDA
                     VLTNGT"
     gene            593..979
                     /locus_tag="VNA10_06320"
     CDS             593..979
                     /locus_tag="VNA10_06320"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HVG37330.1"
                     /translation="MSGPYVLLYDRDCGICSALSRWIHRVDLRGRIRFESIQSGRALL
                     TGIPEERMLDAWHIVTPDGQVTTGGDAVPTLVGAFPIGAGLGRLLAGSSGLMRQVHRL
                     YAFLTRFRDRLVCRLDAAPPSAGSSP"
     gene            complement(909..1814)
                     /locus_tag="VNA10_06325"
     CDS             complement(909..1814)
                     /locus_tag="VNA10_06325"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HVG37331.1"
                     /translation="MFLGAHVSIAESIALAPERGKSVGADAIQIFSRSPRMLRRTKPI
                     PPEEATAFREAMPANGIERAIIHANYLINLAGPDENTLTYSRVAFVEELDRAQLLGVR
                     DVIFHPGSHMGRGEAYAIQMIAASLDWCFEHANAPDVFAVLENTAGAGTVVGYRFEQL
                     AEMMKGSAHPDRLGVCVDTCHTFAAGYDFRTRDGYDTLLRTIDETVGVGRIRAFHLND
                     SVGDLGSKLDRHEDIGKGKLGREAFRFLVNEERFRAVPGCLEFPGRDAGYRRNLKTLR
                     SLVTGTNPPTAGPRPGGKRGGRGTA"
     gene            complement(1887..2654)
                     /locus_tag="VNA10_06330"
     CDS             complement(1887..2654)
                     /locus_tag="VNA10_06330"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG37332.1"
                     /translation="MASYVARPLREGEDIVPDVVRESRTLPWREAAKESDALRPMLIE
                     QFRHEDFRGKLVLDVGTGEGRLAFVAAHAGARVVGVDLDRTKLMHARAYAGIRDIRNV
                     EFVLGDVDKTPYHEFARDPIDAVVSNLCMSPEIVWHASRALRPGGAFVFCCHHGDHWK
                     ETRRGSQWAFYEDVMTDLLQDNRFEVAFMAVDTTVARFDELREVELFLRDSVVRRWVE
                     DGRWEELSDSFARGEKQLTLSYLVVKARKVAAAYETT"
     gene            2718..>2925
                     /locus_tag="VNA10_06335"
     CDS             2718..>2925
                     /locus_tag="VNA10_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009100471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HVG37333.1"
                     /translation="MEVREHGLYIAGKSVPASLNETADVLDPATNRPFASVACGTRDD
                     VNAAVEAARAAFNSPECRDLDPSKR"
BASE COUNT          480 a          979 c          941 g          525 t
ORIGIN      
        1 gttccgttgg tcagcaccgc gtcgtccacg tgcaatcgaa tggcttcacc gaagaagacc
       61 gtgttgtccg ccaccgtgat ggcccggatg aggcggcatt cgaagttcac gggagactcg
      121 gcaatccgcg ggggccggac ggcgtcggag gcaacgggag tcaggcccgc ttcttcgaat
      181 tcgctgatgt gtgcggcgta gtcgccggag gcgacgttca tcttctcggc gatcgcctcg
      241 gtcaccatgt tcacgacgaa ctcccgtgtg tcgaggatgt ttcgcgccgt gtctttggga
      301 cgaccgtcgc gctctcccac ggacagggcg aggaccatcg gccggctcga cactcccatg
      361 ctgtacgaaa acggcgcgca attgttgatg cccgcaaggc tccgcgtcga cacaaacgcg
      421 atcggcctcg ggacgaaggc ggagatcatc agacggtacg agtccttctc cggaagcgac
      481 gacgggtcga gcatcatgga cggtcccgcc ggccggaacg tcgggctgag gattaacgat
      541 tctcgataca acccgtttgt ttaagcccac ctgcgcctag ttttctcgga gcatgtcggg
      601 cccgtacgtc ctcctgtacg accgcgactg cggaatctgc agcgcgctct cccggtggat
      661 ccaccgcgtc gacctccgcg gacgaatccg gttcgagtcg atccagtccg ggcgcgcctt
      721 gctgaccggg attccggagg aacggatgct cgacgcctgg cacatcgtca ccccggacgg
      781 tcaagttacc acggggggcg acgccgtgcc aacgttggtc ggcgccttcc cgatcggcgc
      841 ggggttgggt cgcctccttg cggggtcgtc cggcttgatg cggcaggtcc accggctcta
      901 cgcgttcctc acgcggttcc gcgaccgcct cgtttgccgc ctggacgcgg ccccgccgtc
      961 ggcgggttcg tccccgtgac gagggaccgg agcgtcttga ggttccgccg gtagcccgca
     1021 tcccttccgg ggaactcgag gcaaccgggc actgcgcgga agcgctcctc attcacgagg
     1081 aatcggaacg cctcccttcc gagcttccct ttgccgatgt cctcgtggcg gtcgagtttc
     1141 gatccgaggt cgcccacgga gtcgttcaga tggaacgcgc ggatccgacc cactccgacg
     1201 gtctcatcga tcgtccgcag cagcgtatcg tagccgtccc gcgtccggaa gtcgtatccg
     1261 gcggcgaacg tgtggcatgt gtcgacgcag accccgaggc gatccggatg cgcggagcct
     1321 ttcatcattt cggcgagctg ctcgaaccga tacccgacga cggtgccggc gcccgccgtg
     1381 ttctccagga ccgcgaagac atccggggcg ttggcgtgct cgaaacacca gtcgagactc
     1441 gcggcgatca tctggatcgc gtacgcctcg cctctcccca tgtgggatcc cgggtggaag
     1501 atgacatccc gcactccgag gagctgggcc cggtcgagct cctccacaaa cgcgacgcgg
     1561 ctgtacgtga gcgtgttttc gtccggtccc gcgaggttga tcagatagtt cgcgtggatg
     1621 atcgcgcgtt cgatgccatt cgccggcatc gcctcccgga acgcggtcgc ttcttccggg
     1681 gggatcggct tcgtccggcg gagcatccgc gggctgcggg agaaaatctg gatcgcgtcg
     1741 gcgccgacgg acttgccgcg ctccggcgcg agtgcgatgc tctccgcgat ggagacgtgc
     1801 gcaccgagga acatgctccc ccgacgcggc aattgccttc ggacggatga gcttgccgat
     1861 ttgggcgact tcggtctccg ctttcgtcac gtcgtctcgt acgcggcggc gaccttccgc
     1921 gccttcacga ccagatacga cagggtcagt tgcttctcgc ctcgcgcgaa tgaatcggaa
     1981 agttcctccc aacgcccgtc ctcgacccat cgtcgcacga ccgaatcgcg aaggaagagt
     2041 tcgacctcgc gcaactcgtc gaaccgcgcc acagtcgtgt cgacagccat gaacgcgacc
     2101 tcaaagcggt tgtcttggag caggtccgtc atcacgtctt cgtaaaaggc ccattgagaa
     2161 ccccgtcgag tctccttcca atggtccccg tggtggcagc agaagacgaa cgccccgccg
     2221 gggcggaggg cccgcgacgc atgccacaca atttccggcg acatgcacag gttgctgacg
     2281 accgcgtcga tcggatcccg ggcgaattca tgatacgggg tcttgtcgac atcgccgagg
     2341 acgaactcga cgttccgaat gtcgcggatg cccgcatacg cccgggcgtg catgagtttc
     2401 gtacggtcga ggtccacccc gacgacccgg gcgccggcgt gcgcggcgac gaacgcgagc
     2461 cgcccctctc ccgtgccgac gtccaacacg agttttccgc ggaagtcctc gtgccggaat
     2521 tgttcgatca gcattggacg gagggcgtcg gactctttcg ccgcctcccg ccacggcagc
     2581 gtgcggctct cgcgcacgac gtccggcacg atgtcctcgc cctctcgcaa gggacgcgcg
     2641 acataagagg ccaccggtgc gcgaagggga aagccacacg cttatagtcc tcggcccgat
     2701 gttggcgcgg agcgccgatg gaagtccgcg aacacggctt gtacatcgcc gggaagtccg
     2761 tccccgcttc gttgaacgag accgcggacg tcctcgatcc cgcgacgaat cgaccgttcg
     2821 ccagcgtggc gtgcgggact cgggacgacg tcaacgccgc ggtcgaggcg gcccgggccg
     2881 cgttcaattc cccggagtgt cgggacctgg atccgagcaa gcgcg
//
LOCUS       DATLMA010000496         1429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_834167, whole genome shotgun sequence.
ACCESSION   DATLMA010000496 DATLMA010000000
VERSION     DATLMA010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834167"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VNA10_06340"
     CDS             <1..588
                     /locus_tag="VNA10_06340"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37334.1"
                     /translation="YFCLIRGQSRAQARERTKKVMEELGLWEHRDKLASDLSGGLRQR
                     LIIAMAMVADPEVLFLDEPTIGLDPLGRRSVWHMLRELTRKGATILLTTHYLDEAEIL
                     ADHLLIVDKGRTAFLGTVEEAKGDTGLGMRVIVEPAAGNGSTAPEVLEPRSAEEILAI
                     VERGLREKRKITFKPASLEDAFIKIVGGSIEVENT"
     gene            569..1306
                     /locus_tag="VNA10_06345"
     CDS             569..1306
                     /locus_tag="VNA10_06345"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37335.1"
                     /translation="MKSRIREALYIGLFDALPLLRDPMLLVVISLFSFLPVIFIFVFA
                     DQRSAMQSLIGAIVLTFSFTGLFASQSVYFNKQWFRFQDMFVASRVSPASYAVGLSIS
                     GLVVALPGVVVALVLLLLSGPTSAAGVLLLLTTSLLLWIGLVFVGFAIGATTKNARRA
                     NSIPQVLSIALGFLPPVYYPLDRLPAIAQPIAMLIPTTHAAQLAKYYFGLISIPASEV
                     VIGWAYLLGFAALMGFIASRRAHWVDP"
BASE COUNT          220 a          472 c          446 g          291 t
ORIGIN      
        1 tacttctgcc tcatccgggg gcaatcgcgg gcgcaggccc gcgagcgaac gaagaaggtc
       61 atggaggaac tgggcttgtg ggagcaccgc gacaagctcg cgtcggacct gtccggcggt
      121 cttcgtcagc gtctcatcat cgcgatggcc atggtcgcgg acccggaggt cctcttcctc
      181 gacgagccca cgatcgggct ggatccgctc ggccggcgtt cggtgtggca catgttgcga
      241 gagctcaccc ggaagggcgc cacgatcctg ttgacgacgc actacctcga cgaggcggag
      301 atcctcgcgg accatttgct catcgtggac aagggacgca ctgccttcct cgggaccgtg
      361 gaggaggcga agggggacac agggctcggt atgcgcgtga tcgtcgaacc cgccgcgggc
      421 aacggatcga ccgcgccgga ggtgctcgaa ccgcgatcgg cggaagagat cctcgcgatc
      481 gtcgagcggg gcctgcgcga gaagcgcaag atcacgttca agccggccag cctcgaagac
      541 gcgttcatca agatcgtggg gggttcgatt gaagtcgaga atacgtgagg ccctgtacat
      601 cggcctcttc gacgccctcc ctctcctccg ggacccgatg ctcctcgtcg tgatcagcct
      661 cttctcgttc ctgcccgtga ttttcatctt cgtgttcgca gaccaacggt ccgcgatgca
      721 gtccctcatc ggggccatcg tgttgacgtt ctccttcacg ggcttgtttg cctcacagag
      781 cgtatacttc aacaagcaat ggtttcgctt ccaggacatg ttcgttgcgt cgcgggtatc
      841 ccccgcctcg tacgcggtcg ggctctccat cagtggcctc gtcgtcgcgc tgcccggcgt
      901 cgtcgtggcc ctcgtcctcc ttctcctgtc cgggccgacg tccgcggcgg gagtccttct
      961 cctcctgaca acttcgctgc tcctttggat cgggttggtc ttcgtgggat tcgcgattgg
     1021 ggcgacgacg aagaacgcgc ggcgcgcgaa ctcgatcccg caagtcctga gcatcgcgtt
     1081 gggattcctt ccgcccgtgt actatccgct cgaccgtttg ccggcgatcg cccagccgat
     1141 cgcgatgctc atcccgacga cccacgcagc gcagctcgcg aagtactact tcggcctcat
     1201 ctcaatcccg gcctcggagg tcgtcatcgg ttgggcgtac ctcctcggat tcgcggcgct
     1261 catggggttc atcgcgtcgc gacgggccca ctgggttgac ccgtagcagc ggacgaccgc
     1321 ggcactcacg acgtgtgggg gctccgctgg aagcaaatgc gccagtgcga ttcgaagccc
     1381 gaagcccgcg tctatgtctc tgtctcttcc cattcggcag tcgtcggca
//
LOCUS       DATLMA010000497         1099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_412410, whole genome shotgun sequence.
ACCESSION   DATLMA010000497 DATLMA010000000
VERSION     DATLMA010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412410"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1099)
                     /locus_tag="VNA10_06350"
     CDS             complement(<1..>1099)
                     /locus_tag="VNA10_06350"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HVG37336.1"
                     /translation="AGLALAVTSIADMFAPRPYDGIVPVPYSRKGIAVRAVVPGGPAD
                     RAGIRAGDCVLGIGKRMVDSSSDASAELRKHAIGETVSYIYRRGPCTAEATSNLPIVP
                     VRLSSERLGGTTYLYAAALGFLFFFIGFFVFNRRPEDRAARIFFLLCVLFLLFFVCRL
                     RPASYWWIDLFVQNTGTVSLFLLPAVFLHFFLIFPRPKEFAFAKPDEWTSEPPPRWKE
                     RLQDFLSASPGLFYLLYSIPPVVFLYDVLRQLRGNRVAILSGAPLSSWVLLGDYLVLG
                     LIALAHSAFTLPDARERRQAFHVFIGTILGTAPFVLFGIVLPSAFNIEDYVFYGIVPM
                     IFIPLTFAYAIVRFQMLNVRVIVRRTFLYAAT"
BASE COUNT          254 a          323 c          383 g          139 t
ORIGIN      
        1 gttgcggcgt acaggaacgt gcgccgcacg atcacgcgca cgttcaacat ctgaaaccgc
       61 acgatcgcgt aggcgaacgt cagcggaatg aagatcatcg ggacgatgcc gtagaagacg
      121 tagtcctcga tgttgaacgc cgacgggagc acgatcccga agagcacgaa cggagcggtc
      181 ccgaggatcg tgccgatgaa gacgtggaaa gcctgcctcc gctcgcgcgc gtccggcagc
      241 gtgaaggcgg agtgagcgag cgcgatcagt ccgaggacca ggtaatcgcc gagaagaacc
      301 cacgaggaga ggggcgcgcc cgagagaatt gcaacgcggt tgccgcggag ctgccgcagg
      361 acgtcgtaaa gaaagacgac cggcggaatc gaatagagaa ggtagaagag gccggggctc
      421 gccgacagaa agtcctgcag ccgctctttc cagcggggcg gaggctcgct cgtccactcg
      481 tccggctttg cgaacgcgaa ctccttgggg cgcggaaaga tcaggaagaa gtggaggaac
      541 accgcgggga gcagaaacag cgacaccgtt cccgtgttct gcacgaacag gtcgatccac
      601 cagtaggaag cgggccgaag ccggcagacg aaaaagagca ggaaaaggac gcagagcagg
      661 aagaagatcc gagccgcgcg gtcctccggg cgccggttga acacgaagaa cccgatgaag
      721 aagaagagga agccgagcgc cgccgcgtag agataggtcg ttcccccgag ccgttccgat
      781 gaaaggcgga caggaacgat cggcagattg ctggtcgcct cggcggtgca cggcccgcgc
      841 cggtagatat aagaaaccgt ttcgccgatc gcgtgctttc gaagctcggc cgaggcatcg
      901 gagctcgagt cgaccatccg ctttccgatt ccgaggacgc agtccccggc gcggataccc
      961 gctctgtccg ccggcccgcc ggggaccact gcccggaccg caatcccttt gcggctgtac
     1021 ggcacgggaa cgatcccgtc gtaggggcgg ggcgcgaaca tgtcggcgat cgaggtgacc
     1081 gccagcgcca ggccggcga
//
LOCUS       DATLMA010000498         1106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_772989, whole genome shotgun sequence.
ACCESSION   DATLMA010000498 DATLMA010000000
VERSION     DATLMA010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772989"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..>1106
                     /locus_tag="VNA10_06355"
     CDS             128..>1106
                     /locus_tag="VNA10_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013560461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HVG37337.1"
                     /translation="MSLLRRIEGQRPAGQQPAAPAPGTPPPPGGPPKPPSEGPLTQST
                     SPTRDANRDVRIKLQTRIINNLDPRLDLADAKAVRSSIEEMFNKFIDEEGVVVTRVER
                     QKMLESILDEILGFGPIEPLLKDDTITEVMVNGPFRCYVERKGKLQLSDVTFQSDEHV
                     MRIVERIIAPIGRRVDESKPYEDARLPDGSRVNIIIPPLALNGPVVTIRKFPKYRITV
                     EDYIKFGTATAEMMEFMRACVEARLNMFISGGTGSGKTTLLNIMSGFIPEDERIITIE
                     DAAELRLVQDHVVRLESRAANIEGKGQVSIMDLVKNSLRMRPERIVVGEI"
BASE COUNT          224 a          374 c          332 g          176 t
ORIGIN      
        1 cggcattagt caccggtctg atcccccaaa aggacggcca agggccgggt gagtggacgt
       61 agactcaaac gccgagggag caggcgcccg ccataacggg agccggagat gagggtttct
      121 tagagggatg tcactgctac ggcgcatcga aggtcagcgt cccgctggac agcagcccgc
      181 cgcgcccgct ccgggcaccc ccccgccccc gggcggccca cccaaaccac cctccgaggg
      241 tcccctcacc cagagcactt cccccacacg ggatgcgaac cgtgatgtcc gtatcaagct
      301 ccagacgcgg atcatcaaca acctcgaccc ccgcctcgat ctcgcggacg ccaaggcggt
      361 ccgctcgagc atcgaggaga tgttcaacaa gttcatcgac gaggaaggcg tggtcgtcac
      421 gcgcgtcgag cgtcagaaga tgctcgagtc gatcctcgac gagatcctcg gattcggtcc
      481 gatcgagccg ctgctgaagg acgacacgat cactgaagtc atggtcaacg gcccgttccg
      541 ctgctacgtc gagcgcaagg gcaagctcca gctctccgac gtgaccttcc agagcgacga
      601 gcacgtcatg cgtatcgtcg agcgcatcat cgccccgatc ggccggcgcg tcgacgagtc
      661 gaagccatac gaggacgcgc gtcttccgga cggctcacgc gtgaacatca tcatcccgcc
      721 gctcgcgctc aacggtccgg tggtgacgat ccgtaagttc cccaagtacc ggatcaccgt
      781 cgaggactac atcaagttcg gcacggcgac cgccgagatg atggagttca tgcgggcctg
      841 tgtcgaagcc cgactcaaca tgttcatctc cggtggcacc ggctccggga agacgacgct
      901 cctgaacatc atgtccggct ttatcccgga ggacgagcgg atcatcacga tcgaggacgc
      961 cgcggagctc cgcctcgtgc aggatcacgt ggtccgtctc gagtcgcgag ccgcgaacat
     1021 cgaaggcaag ggccaggtct cgatcatgga tctcgtgaag aactccctcc gtatgcgccc
     1081 cgagcgcatc gtcgtcggtg agatcc
//
LOCUS       DATLMA010000499         1030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_588502, whole genome shotgun sequence.
ACCESSION   DATLMA010000499 DATLMA010000000
VERSION     DATLMA010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588502"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VNA10_06360"
     CDS             complement(<1..487)
                     /locus_tag="VNA10_06360"
                     /inference="COORDINATES: protein motif:HMM:NF015884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HVG37338.1"
                     /translation="MLRPGGKAMAIAASTPAKSKKMTVASVLKRIETEGIRWIDLQFV
                     DVLGALQHITIPSTSLGPEEFKRGVGKLDGSSIKGFKEIHESDMVMDPDPSTFAVLPW
                     YEGAHKTARFFVDVYEGGSHERFTRDSRYMAQRAAQFAADQGYDTTYWGPEIEFFVFD
                     GI"
     gene            650..>1030
                     /locus_tag="VNA10_06365"
     CDS             650..>1030
                     /locus_tag="VNA10_06365"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HVG37339.1"
                     /translation="MAEPTNLDELDVKILRLLNADARKSYRDIAKATDASISTVSSRV
                     RKLEDLGVITGYVPILNEARLGYDVLAVVGVKIHKGKLLEVQRRIAKDDRVTHVYDVT
                     GEWDSIVVVRLKNTRELDAFIKRLG"
BASE COUNT          216 a          325 c          304 g          185 t
ORIGIN      
        1 gaatcccatc gaacacgaag aactcaatct cgggacccca gtaggtggtg tcgtagcctt
       61 ggtccgcggc gaactgggca gcgcgttggg ccatgtatcg ggagtcccgc gtgaaccgct
      121 cgtgactgcc gccctcgtag acgtcgacga agaagcgcgc cgtcttgtga gcgccctcat
      181 accacgggag caccgcgaag gtggacgggt cggggtccat caccatgtcg gactcgtgga
      241 tctccttgaa tcccttgatc gaggagccgt ccagcttgcc cacgcctcgc ttgaactcct
      301 ccggtccgag cgacgtcgat ggaatcgtga tgtgctggag cgcgccgagc acgtccacga
      361 actgaagatc aatccaacgg atcccctcgg tctcgatccg cttcagcacc gacgccacgg
      421 tcatcttctt cgacttcgct ggggtactcg cagcaatcgc catcgccttc ccgcctggac
      481 ggagcaccgt tccgtccgtt gcctcggcag aaatttgaac atatataaac tgttccgagg
      541 tgaaatcgta caaatggccg gaatattgat acggaacgaa acaatgttcg atggaccccc
      601 aagcccgtcg cacacttcga gcaccgcgac ggtgggcgag gcgattcgga tggcggaacc
      661 gacgaatctg gatgaactcg atgtcaagat cctgcggctg ttgaacgcgg acgcgcggaa
      721 atcgtatcgc gacatcgcca aggcaaccga tgcgagcatc agcaccgtct ccagccgggt
      781 ccgaaagctc gaggacctcg gcgtcatcac gggctacgtc ccaatcttga acgaggcccg
      841 actcggctac gacgtcctcg cggtcgtcgg cgtgaagatc cacaaaggca agctcctcga
      901 ggtccagcgt cggatcgcga aggacgaccg cgtcacgcac gtctacgacg tcacgggcga
      961 atgggactcg atcgtcgtcg tccgcctgaa gaacacgcgg gagctcgatg cgttcatcaa
     1021 gcgcctcggc
//
LOCUS       DATLMA010000500         1408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_106782, whole genome shotgun sequence.
ACCESSION   DATLMA010000500 DATLMA010000000
VERSION     DATLMA010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106782"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VNA10_06370"
     CDS             complement(<1..426)
                     /locus_tag="VNA10_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008084031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxy-3-methylglutaryl-CoA reductase"
                     /protein_id="HVG37340.1"
                     /translation="MKSSEVSGFYKKSPEDRWQVIQSFGELSDAEIETIQNTGALKFD
                     QVDRMIENVVGAMPVPLGIAVNFQVNGRDYLVPMAIEEPSVVAAASNAARMARERGGF
                     SASTSGPIMIGQIQLVGVSDPHGARMTILHHKDEILSIAN"
     gene            complement(697..843)
                     /locus_tag="VNA10_06375"
     CDS             complement(697..843)
                     /locus_tag="VNA10_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37341.1"
                     /translation="MAEPTSDASLLVLGLVLTVVGIFSFPFLCVGILVLLVGVILIIA
                     HGGR"
     gene            946..1185
                     /locus_tag="VNA10_06380"
     CDS             946..1185
                     /locus_tag="VNA10_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37342.1"
                     /translation="MPVVLADIAIPFQATASGSAVAFWLFLLALYVAFFLIALWVYQD
                     ARIRGMNNLVWFVIVFLVPVFGLVAYMIYRRDRPL"
     gene            1228..>1408
                     /locus_tag="VNA10_06385"
     CDS             1228..>1408
                     /locus_tag="VNA10_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37343.1"
                     /translation="MAKTRMPGFESCPKFVSVCLPPERLKPCQNMSPREYYGGDDTFG
                     SEACHEEQGYVDCGCG"
BASE COUNT          271 a          426 c          430 g          281 t
ORIGIN      
        1 gttcgcgatc gagaggattt cgtccttgtg atggaggatc gtcatccgcg ccccgtgggg
       61 atccgatacc ccgacgagtt ggatctggcc aatcatgatg ggaccggacg tgctcgcgga
      121 gaaaccacct cgttcccggg ccatccgggc cgcgttggag gccgcggcga ccacgctcgg
      181 ctcctcgatt gccatcggca cgagatagtc ccgcccgttc acttggaaat tcaccgcgat
      241 cccgaggggc actggcatgg ctccgaccac gttttcgatc atccggtcga cctggtcgaa
      301 cttgagcgca cccgtgttct ggatcgtctc gatctctgcg tccgagagct cgccgaacga
      361 ttggatgact tgccagcggt cctccgggct cttcttgtag aagcccgaca cctcggaact
      421 cttcacgtcg gcaccgagcg tcggagaaga ctgtcccgcc ataaaggcat cgcgcgacga
      481 gtcacggcgc gagccggatg ccgcagttcg ggcagaacga gttcccgttt gcaaccggcg
      541 aaccgcagct cgtgcagaac cgacccgtcc ctgcggcggg aggcggacca gccgcgctgg
      601 cggaagttag agcgggttgt gccggaggag gcggcatata cggagagtac gcatagccgg
      661 gcggataccc gggatacatc gttggcggcg ctttcgttac ctgccgccat gggcgatgat
      721 caggatgaca ccgacgagaa gcacaaggat gcccacgcac agaaacggaa aagagaagat
      781 cccgacgacg gtcaagacga gacccaggac gagtagtgac gcgtccgagg tcggttcggc
      841 caatcgcctc tccctcccgt cgggctcgca gattcgtgca taatgatata aatatgggtt
      901 gagggcatgc cgcgcgagcg agaccgcgcc ggtggagtga tcgagatgcc cgtcgtcttg
      961 gcagacatcg cgatcccgtt tcaggcgacc gcgtcgggct cggcggtcgc attctggctg
     1021 ttcctcctcg ccctctacgt cgccttcttc ctcatcgccc tatgggtgta ccaagacgcc
     1081 cggattcgcg ggatgaataa cctcgtttgg ttcgtcatcg tcttcttggt gccggtgttt
     1141 ggcctggtcg cgtacatgat atatcgtcga gacaggccac tctagccgtc tacatttctc
     1201 atatccgcgc tcaactcgcc tgcaaccatg gccaaaaccc ggatgcctgg gttcgaaagt
     1261 tgccccaagt ttgtcagcgt ttgtcttccg ccagaacgtt taaaaccatg tcaaaacatg
     1321 tcgccccggg aatattatgg aggagacgac accttcggca gcgaagcctg ccacgaagag
     1381 cagggctatg tggattgcgg ttgcggtt
//
LOCUS       DATLMA010000501         1360 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_287855, whole genome shotgun sequence.
ACCESSION   DATLMA010000501 DATLMA010000000
VERSION     DATLMA010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287855"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VNA10_06390"
     CDS             <1..289
                     /locus_tag="VNA10_06390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37344.1"
                     /translation="MFRGASAKKSEREEEARLRKGGKREEEEEKEKESSPPRKVSGVG
                     DEAYWVGPAIVGGLYVRKGDSYFRLSVGGPDREAVKIEKLKKLGRKAVGRL"
     gene            309..623
                     /locus_tag="VNA10_06395"
     CDS             309..623
                     /locus_tag="VNA10_06395"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HVG37345.1"
                     /translation="MSGARLERWDPKDGPLTEKRMLGLMEAEGYEVAVYAYREGISFP
                     PHQHAQAKCDGVVEGTLRITVGDETYDLGPGDRLYLPAGTRHSAEVVGAKTVVSLDGT
                     RW"
     gene            663..1163
                     /locus_tag="VNA10_06400"
     CDS             663..1163
                     /locus_tag="VNA10_06400"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HVG37346.1"
                     /translation="MPLTSAEREERIRRYEQGPARLKAALAKVPAEARKWRPGEGKWS
                     VHEVICHCGDSEANGSLRIRYLAAEEDPLIVGYDQAQWARTLDYHSAPLEPALAVVEA
                     VRANTAALLRRLPEKAWSAVARHTESGRYTAEDWLNTYAEHLEKHSGQIERNFAAWQA
                     TKGGKE"
     gene            1166..>1360
                     /locus_tag="VNA10_06405"
     CDS             1166..>1360
                     /locus_tag="VNA10_06405"
                     /inference="COORDINATES: protein motif:HMM:NF013869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HVG37347.1"
                     /translation="MAFVREFKEFLVKQNALALAVAVIIGAAIGKVVTSIVEDVINPI
                     FGVALPGGSWRDAKIVLSRTT"
BASE COUNT          269 a          409 c          476 g          206 t
ORIGIN      
        1 gatgttccgg ggagcgtccg cgaaaaagag cgaacgcgag gaggaagcgc ggttgcgcaa
       61 aggcggcaag cgtgaggagg aagaggagaa agagaaggag tcttctccgc cccggaaagt
      121 ctcaggcgtc ggggacgagg cgtattgggt gggacccgcc atcgtgggcg gtctctacgt
      181 tcggaaaggc gactcctatt tccgattgag cgtcggagga cccgaccgcg aggcggtcaa
      241 gatcgaaaag ctgaagaagc tcggtcgaaa agccgtcggt cggctttgag gcggcctaca
      301 cttcgctcgt gagcggggcg cgcctcgaac gctgggaccc gaaagacggt cctctgaccg
      361 aaaagcgaat gttgggcctc atggaggccg aaggctacga ggtcgccgtc tacgcctatc
      421 gcgaagggat ctcctttcca ccgcatcagc atgcgcaggc gaaatgcgac ggggtcgtcg
      481 agggaactct ccggatcacg gtcggcgacg aaacctacga cctcggcccc ggtgatcggc
      541 tctatctccc cgcggggacg cggcactcgg cagaagtggt cggcgcgaag acggtcgttt
      601 cgctcgacgg aacgcgctgg taactccgac acggtagact ccgccgcaag agcggagctc
      661 ccatgccttt gacgtccgcg gaacgcgagg aacggatccg gcgctacgag cagggacccg
      721 cgcggttgaa agccgcgctc gcgaaagttc cagccgaggc gaggaagtgg cgtcccggcg
      781 aagggaagtg gtcggtccac gaggtcatct gtcactgcgg cgactccgaa gcgaacggtt
      841 cgctgcggat ccgctatctc gccgccgagg aggatccact gatcgtcggc tacgaccagg
      901 cgcagtgggc gcggaccctc gactaccact ccgctccgct cgaaccggcg ctcgcggtcg
      961 tcgaagctgt tcgcgcgaac acggccgctc tcctgcggcg ccttccggaa aaggcctggt
     1021 ccgcggtcgc ccggcacacg gaatccgggc ggtacaccgc cgaagactgg ctgaacacgt
     1081 atgcggagca cctcgagaag cactcgggtc agatcgagcg gaacttcgcc gcctggcagg
     1141 cgacgaaagg cggaaaggag tagccgtggc attcgtccgg gagttcaagg aattcctcgt
     1201 caagcagaac gcgctcgctc tcgccgtggc ggtcatcatc ggcgccgcga tcggaaaggt
     1261 ggtcacgtcg atcgtggaag acgtcatcaa tccgatcttc ggcgtcgcgt tgccgggcgg
     1321 cagctggcgc gacgcgaaga tcgtgctgtc gcggacgacg
//
LOCUS       DATLMA010000502         1364 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_287889, whole genome shotgun sequence.
ACCESSION   DATLMA010000502 DATLMA010000000
VERSION     DATLMA010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287889"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..>1364)
                     /locus_tag="VNA10_06410"
     CDS             complement(325..>1364)
                     /locus_tag="VNA10_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37348.1"
                     /translation="KDDLRREADDSHRLLQPLDDAKIEALRQLDAVPFTERDEKRLEF
                     VGASVVEKAGKRKRLDELTVLLRQVGDVSARLADLAAQRSALESERAALETEVAGLRS
                     SEEAFGSAKAKLEALQKELDAERKAWHLLEGQATTLKEQIAGLETDAKKLQESQRQRE
                     ALRGEVEIYDVLVNRVFHKRGVVMYAVDQLLPELEIEASKNLSELTDGRFGRIRLETY
                     EEGRGHGIRILVQGVDGQWHDVAEFSGGEKTQINAALRFAIARELASMPQIGRTFGRM
                     KTLFIDEGDLGSLDTEISRELFVQKLLRMGEVFEKVILITHLAEIAERFPGRIRVTMT
                     PNQESRAEVLS"
BASE COUNT          215 a          467 c          423 g          259 t
ORIGIN      
        1 agccaccagc tcgagaggtt gagcaggaac gagtacgagc cgtcgaccgc gatcatgtct
       61 ttcgcggggt cggcgcatcg gaacgtccgg aaatcgggga cctcctccgg cgggagcggc
      121 acgtcccggt gatgcttcac gagcagctcg agttcccgtc gcatgtcgtc gacgtagcca
      181 acgcgggggc gctccgggtc cggagccggt cccgtgtcat cccttcggac cagagggcaa
      241 ccctcaagcg ccaaagaggg cgcgggacgg catataagga tgccgaacac ccctgcaaca
      301 gtacgcccgc atctccatgg ccattcagga taggacttcc gcgcgcgact cctgattcgg
      361 ggtcatcgtc actcggatgc gaccggggaa ccgctcggcg atctcggcga ggtgcgtgat
      421 caggatcacc ttctcgaaga cctcccccat gcgcagcaac ttctggacga acagttcccg
      481 ggagatctcc gtgtcgaggg agccgaggtc cccttcgtcg atgaacagcg tcttcatgcg
      541 accgaacgtg cggccgatct gcggcatcga ggcgagctcc cgtgcgatcg cgaatcgaag
      601 ggccgcgttg atctgcgtct tctccccgcc gctaaactcg gcgacatcgt gccactgacc
      661 atcgacaccc tggacgagga tccggatccc gtggccccgg ccctcctcgt acgtctccag
      721 gcggatccga ccgaaccggc cgtccgtgag ctcggagagg ttcttcgacg cctcgatctc
      781 cagttccggc aggagctgat cgaccgcgta catcacgacc ccccgcttgt ggaatacacg
      841 gttcacgagg acatcgtaga tctcgacttc gccgcgaagc gcctcccgct gccgctgtga
      901 ctcctgcagt ttcttcgcgt ccgtctcgag gccggcgatc tgttccttca gcgtcgtcgc
      961 ttgtccttcg aggaggtgcc acgccttccg ctcggcatcg agttctttct ggagggcctc
     1021 gagcttcgcc ttcgccgagc cgaacgcctc ctccgacgat cggagtcctg cgacttcggt
     1081 ttcgagggcc gcccgttcgg attcgagggc cgaccgttgc gccgcgaggt ccgcgaggcg
     1141 cgcgctcacg tcgccgacct gccgcaacag gaccgtgagt tcgtcgagtc gcttccgttt
     1201 cccggccttt tcgacgacgg acgcgccgac gaattccagg cgcttctcgt cccgctccgt
     1261 gaatgggacc gcatcgagct ggcgcagcgc ctcgatcttt gcgtcgtcga ggggttggag
     1321 gagccgatgg ctgtcgtctg cctcccgtcg gaggtcgtcc ttca
//
LOCUS       DATLMA010000503         1196 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_889535, whole genome shotgun sequence.
ACCESSION   DATLMA010000503 DATLMA010000000
VERSION     DATLMA010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889535"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..>1196)
                     /locus_tag="VNA10_06415"
     CDS             complement(209..>1196)
                     /locus_tag="VNA10_06415"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HVG37349.1"
                     /translation="ALLWVGITLVILLLIFILGGVVAIPWLPSPSLDLRSLAPWIYII
                     PILVATKTLLEVLRPVFRAALRSHVRYEADIFAHFQLVSYVVWGTAIALVLFVLLGGG
                     TQGYSLLGTGLVTAALIYVMQEPLLNIVGWVVLVTMGLYKLGDRIEMNQTKGYVVEIT
                     PMNTTLREFGGLLYGDTFTGRYVTIPNSQILKGNVFNYTKDTPFVWDQLTVSVTYESD
                     HKLAEKLILEAAEDVVGPMMRENRNQLRAKYEFADLADYMAEEPRVGWGMKDSSVDLT
                     LVYFCPVFAKGGYRTRLVKRVLEKFANESRVEFAYPHMQMVPTEEKKVSVLR"
BASE COUNT          236 a          362 c          377 g          221 t
ORIGIN      
        1 tggaacgtcc cgtcccgctg gcgcacgatg aggaacgcga tgcctccaag attccggacg
       61 tcttcgaccc aacccgccag caccgcctcc ttgccgtggt ccgccggcgt cagggtcgat
      121 aacgattgga agggggccat ccacgcgggc aatgaaccgc ggcaataaag attgcacgga
      181 tggcccgcat cggccgccga ccgttatgct atcggaggac gctgaccttc ttctcttcag
      241 tcggaaccat ctgcatgtgg gggtacgcga attcaacgcg cgactcgttc gcgaacttct
      301 cgaggacgcg cttcacgagc cgggtccgat atccgccctt tgcgaagacg ggacagaaat
      361 acacaagggt gaggtccacg gacgagtcct tcatccccca gcccactcga ggctcctcgg
      421 ccatgtagtc ggccaagtcg gcgaactcgt acttggcccg aagttggttg cggttctctc
      481 gcatcatcgg gccgacgacg tcttccgcgg cctccaggat cagcttctcg gcgagcttgt
      541 ggtcgctctc gtacgtcacg ctcacggtga gctggtccca gacgaacggc gtgtctttcg
      601 tgtagttgaa cacgttccct ttgaggatct ggctgttcgg gatcgtcacg tagcgcccgg
      661 tgaaggtgtc gccgtacagc aagccgccaa actctcggag tgttgtgttc atcggcgtga
      721 tctcgacgac ataccctttc gtttggttca tctcgatccg gtcgcccagc ttgtagaggc
      781 ccatcgtcac gagcacgacc cagccgacga tgttgaggag cggttcctgc atgacgtaga
      841 tcagcgcggc ggtgaccaat ccggtcccga gaaggctgta tccctgcgtg ccgccaccga
      901 ggaggacgaa caggacaagt gcgatcgccg tgccccagac gacatacgac acgagttgga
      961 agtgtgcgaa gatgtccgcc tcgtatcgca cgtggctgcg gagcgccgcc cggaacaccg
     1021 gacggaggac ctcgaggagg gttttcgtcg cgacgaggat cgggatgatg taaatccacg
     1081 gcgccaggga ccggaggtcc aggctcggag agggaagcca tgggatcgcg acgaccccgc
     1141 caaggatgaa aatgaggagc aggatgacga gcgtgatgcc aacccagagg agggct
//
LOCUS       DATLMA010000504         7979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_773521, whole genome shotgun sequence.
ACCESSION   DATLMA010000504 DATLMA010000000
VERSION     DATLMA010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 7979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7979
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773521"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VNA10_06420"
     CDS             complement(<1..500)
                     /locus_tag="VNA10_06420"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HVG37350.1"
                     /translation="MAQTTPSEIAGANSAAPVAVLVVDGNEDHQILGVAALTRKGWIV
                     RTAASRKQGLQLALSYHFDAVVIASKLRDGNGIELLRALGGRLPGTPIIFVVPLGGEE
                     AALQAMESGAQSYIVKTPRYNELLPAIVEEHVVEARNRKRLVETEEIQAQAVTARKTV
                     EEQLSQ"
     gene            complement(659..1351)
                     /locus_tag="VNA10_06425"
     CDS             complement(659..1351)
                     /locus_tag="VNA10_06425"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37351.1"
                     /translation="MRAFDDVLGGGIPEGYVVLVSGAPGTMKSSLTFSILYQNALQEN
                     RKCAYFTLEQGKDLILEQMASMGMADARAAEHIVTLDMGNIRKNLNFLQGRGSWLELF
                     KMYCKNVMKADPVSVLVVDSLDVLETMAKMQDRRSELYFLFEWLRDLGPLTFLISERP
                     LELGTGDSSPEEAYLADGILALEMHPTSDLFVQRRLRVVKMRGTKHDTGYYAFSFEDG
                     AFEVTRAVSGTA"
     gene            1483..2103
                     /locus_tag="VNA10_06430"
     CDS             1483..2103
                     /locus_tag="VNA10_06430"
                     /inference="COORDINATES: protein motif:HMM:NF019380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1616 domain-containing protein"
                     /protein_id="HVG37352.1"
                     /translation="MSDDVLGAVVATARVIGALVLLFFLPGFLLINALYPRKGELDRE
                     YDALYRLTLGIVLSIAVTVFWSFFLNSLGINEATGLGYVVGPNIAGGLIGLSAAFFAL
                     GWWRGAYPWMARIHPSLARVPKPGPGELLTEDERDHRVRLKLQQLAEKREALRRAIKD
                     AERRMRLQSTDAQSHYETVRDKSRAELRTVEAELKKIEEERAAELY"
     gene            2116..2469
                     /gene="pth2"
                     /locus_tag="VNA10_06435"
     CDS             2116..2469
                     /gene="pth2"
                     /locus_tag="VNA10_06435"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011839008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-tRNA hydrolase Pth2"
                     /protein_id="HVG37353.1"
                     /translation="MDYKLVIAVRSDLDLSRGKLAVQVAHAAVMAALEAKARHRKWFA
                     EWIAEGQKKVVVKGGPLPELRSLQAKARSMHLPTALVEDAGLTELPPGTVTCVGIGPG
                     PNAIVDQVTRHLPLM"
     gene            2471..3043
                     /locus_tag="VNA10_06440"
     CDS             2471..3043
                     /locus_tag="VNA10_06440"
                     /inference="COORDINATES: protein motif:HMM:NF014056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF99 family protein"
                     /protein_id="HVG37354.1"
                     /translation="MKAKSRFLGIDDAPFRFSDETVPIVGVVVQAPSYIEGVLTTLAE
                     VDGHDATERIAAMVRGSRYRAGLAAILIDGTAVGGFNVIDIEAVRAAVERPVVTVTRK
                     RPNLGSIETALRRRFDDWQERLAIIRRHETEPIRTGHGTVWVTYVGAKRTEVQEALSL
                     TTVRGVLPEPLRVAHLIAAGIVRGESRGRA"
     gene            complement(3065..4099)
                     /locus_tag="VNA10_06445"
     CDS             complement(3065..4099)
                     /locus_tag="VNA10_06445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA surveillance protein pelota"
                     /protein_id="HVG37355.1"
                     /translation="MRVLHKDPSTGEIKVRVENADDLWHLHNLVLPGDQVRASTYRRQ
                     EVKTDKVRPERGEKVRVTLTLRVESVEFQTFADRLRITGVIVEGPQDLGRHHTLNVAV
                     DDVVSVIKTWRAHELRRIDEAVAAAQKPLVAFLSLDDEEALLAQLRQYGVRELATIRA
                     LGHGKMFPSGDAQSVYFDEIHAKLRTTELGEALVLVGPGFTRDAFLDYLKAREPTLAS
                     KVHTHGTSGAGMQGIQEALKAGVGAKVFGDSRVGYETRLVEKLLEAIATDRPCAYGPA
                     EVAEAVEAGAVETLLVSDAVVRDVGIEDLMRSAESARGTVVLVSRHHEAGQKLEALGG
                     IAALLRFPIK"
     gene            4216..4704
                     /locus_tag="VNA10_06450"
     CDS             4216..4704
                     /locus_tag="VNA10_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37356.1"
                     /translation="MALERYLFRADSDGYAYRQILEVRPGSVRLLHPSEKARRFTRWI
                     STLFALGFVFVFGAFVSQTALVLTLSGLSGLIIEAALIAFYFAGLIVLLLWWDDRSLP
                     LLAENPGASVGLDVVGVTSFGTFQELRARTSGREVRIAVHGSKERVGEALRLAGLAMS
                     PT"
     gene            complement(4751..5983)
                     /locus_tag="VNA10_06455"
     CDS             complement(4751..5983)
                     /locus_tag="VNA10_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008082665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit
                     gamma"
                     /protein_id="HVG37357.1"
                     /translation="MKVPGQPEVNIGVVGHVDHGKSTLTERLTGERTDRHSEEIKRGI
                     SIRLGYADMAIYKCPKDEEPAAYQNTEICKTHNVKGELQRIVSFVDSPGHETLMATML
                     SGAAIMDGALLVIAANEDCPQPQTKEHLMALGIIGVDKIVIVQNKIDIVDPKQAEENY
                     RQIQAFVKGTVAEGAPIVPVSAHHDVNLDALLMMIQKVIPTPPHDESKIAKMYVARSF
                     DVNQPGIVPEKIVGGVLGGSLMQGKMKVGEEIEISPGRQVTLGNKTEWKNITTTIRSL
                     HTGGSGRKEVRPGGLIAIGTNLDPVLTKADGLVGRVVGPPASLPEILMKMTVEVNLLE
                     RVVGVPEELKVEGIKTSEPLMVSVGTATTVGVVTSARENRADMALKIPVVAEPGQRVA
                     VSRRIGGKWRLIGYGVLK"
     gene            complement(5980..6369)
                     /locus_tag="VNA10_06460"
     CDS             complement(5980..6369)
                     /locus_tag="VNA10_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012940275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6e"
                     /protein_id="HVG37358.1"
                     /translation="MAEFKAVIADPKSGKAYKKDITGHYANALIGKKIGEDLDGLYVG
                     LPGYKLQITGGSDKDGFPMRSDLPGPRRKRLLLSGGIGFHPVRPGMRKKKTVRGNTVS
                     PDILQLNLKIVVRGPKSIEDAWQEQAR"
     gene            complement(6464..7693)
                     /gene="cysS"
                     /locus_tag="VNA10_06465"
     CDS             complement(6464..7693)
                     /gene="cysS"
                     /locus_tag="VNA10_06465"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HVG37359.1"
                     /translation="MCDRMVLRLYNTRTQKKETFAPRVAGRVKMYVCGPTTYDYSHLG
                     HARSYIDFDTARRYLEFLGYRVTYVVNFTDIEEVIIRRAKEAGKEPLAYAQYYIDSFL
                     DDMRALNVRPADHMPKVSEHILEITALIARLVDRGYAYSVDGEVYFRTRKAKQSFGIL
                     SHQKFEDIVVEGPAATSPKEDPLDFALWKKSKGDEPSWPSPWGDGRPGWHVECNAMAY
                     KYLGAPLDIHGGGVDLKFPHHESEAMICEGAWGGEWARTWMHNGFVTLEREKMSKSLG
                     NFVTIREVLRDYPGEVVRLCLLKAPYREDVEYDAACFARSRKEYDAMRAAIEAARTAT
                     GAGTGGKVAALVERMRDGFFKAMDDDLNTRDAVYRLQQMTEAVAELRTMSAAEGRAVV
                     DVYRDCGRILGLFPNLR"
     gene            7810..7881
                     /locus_tag="VNA10_06470"
     tRNA            7810..7881
                     /locus_tag="VNA10_06470"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7842..7844,aa:Ala,seq:cgc)
BASE COUNT         1297 a         2616 c         2502 g         1564 t
ORIGIN      
        1 ctctgggaca gctgttcctc gacggtcttc cgcgcagtca ccgcttgggc ctggatctcc
       61 tcggtctcca ccaggcgctt ccgattccgt gcttccacga catgttcctc gacaatcgcc
      121 ggcagcagtt cgttgtaccg cggcgtcttc acgatgtacg attgggctcc ggactccatc
      181 gcctggagcg ccgcctcttc gccccccagg gggacgacga agatgattgg cgtgcccggg
      241 agtcgacccc cgagggcgcg caggagttcg atgccgttcc cgtcgcgcaa cttgcttgcg
      301 atgacgaccg cgtcaaaatg gtaggagagc gcgagctgca atccctgttt cctcgacgcg
      361 gcggttcgga cgatccatcc ttttcgggtg agcgcggcga cgccgaggat ctgatggtct
      421 tcattgccgt cgaccacgag gaccgcgacg ggggctgcgc tgtttgcccc cgcgatctca
      481 gagggagtcg tctgggccat agcggatcgg cgggcgcctg aaccgacacg aggatgccct
      541 cgcgcgggac gtcggactag ttctccggcc ggtataaagg cctagcgggg agattcgcgg
      601 tttcgtcact tgattcggga gcacggttcg cttcagtgtg gacgacgcgg tgaaggacct
      661 atgcggtacc gctgacggcg cgcgtcacct cgaaggcacc gtcttcgaag gagaacgcat
      721 agtaccccgt gtcgtgcttc gtccctcgca tcttcacgac tcgcaggcga cgttgcacga
      781 agaggtccga ggtcggatgc atttccaggg ccaggatgcc atccgccagg tacgcctcct
      841 cgggagagga gtcgccggtt cccagctcga gcggtcgctc tgaaatcagg aacgtcagcg
      901 ggccgaggtc cctcaaccat tcgaagagaa agtagagctc ggacctccgg tcttgcatct
      961 tcgccatggt ctcgaggacg tcgagcgagt cgacgaccag gaccgaaacg ggatccgctt
     1021 tcatcacgtt cttgcagtac atcttgaaga gttcgagcca gctgccccgt ccctgaagga
     1081 aattcaggtt cttccggatg ttccccatgt cgagggtcac gatgtgctct gccgctcggg
     1141 catcggccat acccatcgaa gccatctgct cgaggatcag atcttttcct tgctcgaggg
     1201 tgaagtacgc gcacttgcgg ttctcctgca gcgcgttctg ataaaggatc gaaaaggtca
     1261 gcgaggactt catcgtcccc ggcgcaccac tcacgaggac gacgtatccc tccgggatcc
     1321 ctcccccgag cacatcgtcg aaggcccgca cgtacgtctt gacgcgattc cgactcgtga
     1381 tgtggcctcc gggtcggatg tatgcgcgcg tcgtcctaag ccttttcctc cgagatgtcg
     1441 aacgcacaat cttcaaatat actcgggccg ctgggccgca cattgtcgga cgatgtcctg
     1501 ggcgcggtcg tcgcgacggc ccgcgtgatt ggggcgctcg tgctcctctt cttcctgcct
     1561 gggttcctgc tcatcaacgc gctctacccc cgaaaaggcg agctggatcg ggagtacgac
     1621 gcgctgtatc gcctcacgct tgggatcgtc ctgtccatcg ccgtcacggt gttctggtcg
     1681 ttcttcctca actcgctcgg gattaacgag gcgaccgggc tcgggtacgt cgtcgggccg
     1741 aacatcgccg gcggattgat cggcctctcc gccgcgttct tcgccctcgg ctggtggcga
     1801 ggcgcgtacc cgtggatggc ccgcatccat ccgtcgctcg cgcgggtccc gaagccgggc
     1861 ccgggagagc ttctgaccga agacgagcga gaccatcgtg tccgcctcaa gctccagcag
     1921 ctcgccgaga agcgcgaagc gttgcggcgg gcgatcaaag acgccgagcg ccgcatgcgg
     1981 ctccaatcga cggacgcgca atcccattac gagaccgtcc gggacaagtc ccgtgcagag
     2041 ctccggacgg tcgaagcgga gctgaagaag atcgaagagg agcgggccgc ggaactctat
     2101 tgaccggagc gggacatgga ttacaaactc gtgatcgcgg tgcgctcgga cctcgacctc
     2161 tcgcggggga agctggccgt ccaggtggcc catgccgcgg tcatggcggc actcgaggcg
     2221 aaggcccgcc atcggaaatg gttcgctgaa tggatcgcgg agggccagaa gaaggtcgtc
     2281 gtcaaaggcg ggcccctccc ggaactccga tcgctccaag cgaaagctcg ttcgatgcac
     2341 ttgcccacgg cgctcgtgga ggacgccgga ttgacggagc ttccgccggg gacggtcacg
     2401 tgcgtcggaa tcgggccggg cccgaatgcg atcgtggacc aggtcacccg tcatctcccc
     2461 ttgatgtgat atgaaggcca aatcccgttt cctcgggatt gatgatgccc cgttccgttt
     2521 ctcggacgag accgttccca tcgtcggggt cgtcgtccaa gcaccgtcgt acattgaggg
     2581 cgtcctgacg acgctcgcgg aagtggacgg tcacgatgcg accgaacgga tcgccgcgat
     2641 ggtgcgaggt tcccggtacc gcgcgggact cgcggcaatc ctcatcgacg ggaccgcggt
     2701 cggtggcttc aacgtcatcg acatcgaggc ggtccgtgcg gcggtggagc gaccggtcgt
     2761 cacggtcacg cgaaagagac ctaacctcgg ctcaattgag accgcgttac gacgccgttt
     2821 cgacgactgg caagaacgac tggccatcat ccgccggcac gagaccgagc caatccggac
     2881 tggccacgga acggtctggg tgacatacgt cggggcgaag cgaaccgagg tccaggaggc
     2941 gctctcactc acgacggtcc gcggcgtcct tccagaaccg ctgcgcgtcg cccatctcat
     3001 cgccgcgggg atcgtccgag gcgagtcccg tggacgggct tgactcggtg cgaccgcaga
     3061 cctctcactt gatgggaaat cggagaagcg cggcgatccc gcccaacgcc tcgagcttct
     3121 ggccggcctc gtgatggcgg ctcaccagga cgacggtgcc ccgcgcggac tcggcggaac
     3181 gcatgagatc ctcgatgccg acgtctcgga cgaccgcgtc gctgacgagg agggtttcga
     3241 ccgctccggc ctcgacggct tccgcgactt cggccggtcc gtacgcgcac ggtcggtccg
     3301 tcgcgatcgc ttccagcagc ttctcgacca gccgcgtctc gtacccgact cggctgtccc
     3361 cgaacacctt cgcgccgacg cccgctttga gcgcctcctg gatcccttgc atcccggcgc
     3421 ctgatgtgcc gtgggtgtgg actttcgagg cgagggtcgg ctcacgggct ttcaggtagt
     3481 cgaggaaggc gtcccgggtg aacccgggtc cgacgaggac gagcgcctcc ccgagttccg
     3541 tcgtgcgcag cttcgcgtgg atctcgtcga agtagacgga ctgcgcatct ccggatggaa
     3601 acatcttacc gtgccccagc gcgcgaatcg tcgcgagttc tcgaacgccg tattgccgga
     3661 gctgagccag gagcgcttct tcgtcatcca acgagaggaa cgcgacgagc ggcttctgcg
     3721 ccgcggcaac ggcctcgtcg atccgtcgca actcgtgcgc tcgccacgtc ttgatgaccg
     3781 agaccacgtc gtcgaccgcg acgttcaacg tgtgatgccg tcccaagtct tgcggtccct
     3841 cgacgatgac gcccgtgatg cgcagacggt cggcgaaggt ttggaactcg acgctttcca
     3901 cgcggagggt cagcgtcacg cggaccttct cgccccgctc gggccggacc ttgtcggtct
     3961 tcacttcctg gcggcggtag gtcgacgcgc gcacctggtc tccgggaagg acgaggttgt
     4021 gcagatgcca gaggtcgtcc gcgttctcca cgcgaacctt gatctcgccg gtgctcgggt
     4081 ctttgtggag gacccgcata gtgcgccagc ctagggatgg gaccttattt ctgcgtatcg
     4141 aaacggggtg tcctgcagtc cacacaggcg gcgttcccgc gcgagcctta agacctcacg
     4201 aaccgtttcg ccgtcatggc gctggaacgg tatctcttcc gcgcggactc cgatggatat
     4261 gcgtatcgcc agattttgga agtccgaccc ggctccgtgc gcctgctgca tccttccgaa
     4321 aaggcgagga gattcactcg gtggatctcg accctgttcg cactcggatt cgtcttcgtt
     4381 tttggggcct tcgtgagtca gactgccctc gtcctcaccc tgtccgggct gagcggcctc
     4441 atcatcgagg cagcgctcat cgcgttctac ttcgcgggcc tcatcgtgtt actcctgtgg
     4501 tgggatgatc ggagcctccc cttgctggcg gagaacccag gcgcttccgt gggactggat
     4561 gtcgtcggcg tgacctcgtt cgggacattt caagaactcc gagcacggac aagcggccgg
     4621 gaggttcgga ttgcggtcca cggttcaaaa gagagagtgg gagaggccct gcgtctcgcc
     4681 ggtctcgcga tgagcccgac ctgatcaaag tcgtcgagac agccgcattg cttgagcggt
     4741 ttggcgcggc ctacttcaag acgccatatc cgatgagtcg ccacttgccg ccgatccggc
     4801 gggagacagc aacacgctgt ccgggctctg cgacgaccgg gatcttgagg gccatgtccg
     4861 cccggttttc gcgcgccgac gtgacgacgc ccaccgtcgt cgcggttccg accgacacca
     4921 tgagcggctc cgatgtcttg atgccctcga ccttgagttc ctcaggcact ccgaccacgc
     4981 gctccagcag attgacctcg acggtcatct tcatcaagat ctccggaagg ctcgcgggag
     5041 gcccgacgac ccgaccgacc aggccgtccg ccttcgtcag cacgggatcg aggttcgtcc
     5101 cgattgcgat gagcccgccc ggtcggacct ctttccgtcc tgaacctccc gtgtgaaggg
     5161 accgaatcgt cgtcgtgatg ttcttccatt ccgtcttgtt gccgagggtc acctgacgac
     5221 ccggagagat ctcgatctcc tcgccgacct tcattttgcc ttgcatcagg ctgcccccga
     5281 ggacgcctcc gacgatcttc tctggcacga tgcccggctg attcacgtcg aacgaccgcg
     5341 cgacatacat cttggcgatc ttcgattcat cgtgcggcgg ggtcgggatg actttctgga
     5401 tcatcatgag caacgcgtcc aggttcacgt cgtggtgcgc ggacacgggg acgatcggcg
     5461 cgccctccgc gacggtcccc ttgacgaacg cctggatctg acgataattc tcttcggcct
     5521 gcttcgggtc gacgatgtcg atcttgttct gcacgatcac gatcttgtcg accccgatga
     5581 tgccgagggc catcaggtgc tccttcgtct gcggctgcgg gcagtcctcg ttggcggcga
     5641 tcacgaggag cgccccgtcc atgatcgcgg ccccgctgag catcgtcgcc atgagcgtct
     5701 catggcccgg cgagtcgacg aacgacacga tccgctgcag ctcgcccttc acgttgtggg
     5761 tcttgcagat ctccgtgttc tggtacgccg cgggctcctc gtccttcgga cacttgtaga
     5821 tcgccatgtc cgcgtagccg aggcggatcg agatgccccg tttgatctcc tcgctgtggc
     5881 ggtccgtccg ttcgcccgtg aggcgctccg tgagggtcga cttcccatgg tccacatgac
     5941 cgacgacgcc gatgttgacc tccggctggc ccgggacctt catcgcgcct gctcctgcca
     6001 cgcgtcctcg atcgacttcg gcccgcgcac gacgatcttc aggttcaact gaaggatgtc
     6061 gggcgagacc gtgtttccgc ggaccgtctt cttcttccgc attccgggtc ggacgggatg
     6121 gaagccgatg ccaccgctca ggaggaggcg cttccggcgc ggcccgggca ggtcggaccg
     6181 catcgggaag ccgtctttgt cgctcccgcc ggtgatctgg agtttgtagc cgggcaatcc
     6241 gacgtacagg ccatcgaggt cctccccgat cttcttgccg atgagggcgt tcgcgtagtg
     6301 acccgtgatg tccttcttgt acgccttccc ggacttcggg tcggcgatga ccgccttgaa
     6361 ctctgccatg ggatcctctc ggagagagat gcgtccatgc ggggctttca cataagactt
     6421 acgccgcggc ctcccggccg acgacggaac gcgtctcgag ggttcagcgg aggttcggga
     6481 agagaccgag gatccgcccg caatctcggt acacgtcgac gacggcgcgg ccctcggccg
     6541 cggacatggt cctcagctcg gcgacggcct ccgtcatctg ttgcaagcga tagaccgcgt
     6601 cgcgggtgtt gaggtcgtcg tccattgctt tgaagaaacc gtctcgcatg cgttcgacga
     6661 gggccgcgac ctttcctccc gtccccgcgc cggtcgcggt ccgcgcggcc tcgatcgcgg
     6721 cccgcatcgc atcatattcc ttccgagacc gggcgaagca cgccgcgtcg tattcgacgt
     6781 cctcgcggta cggggccttc agcaagcaga gccggacgac ttcgccggga taatcgcgga
     6841 ggacctcgcg gatcgtcacg aagttcccga ggctcttgga catcttttcc cgctccaacg
     6901 tcacgaagcc gttgtgcatc cacgtgcgcg cccactcccc accccaggcg ccctcgcaga
     6961 tcatcgcctc gctctcgtgg tgcgggaact tcagatcgac acccccgccg tggatgtcga
     7021 ggggcgctcc gagatacttg tacgccatcg cattgcactc gacgtgccac ccgggccgtc
     7081 cgtcgcccca cggactcggc cacgacggct cgtccccttt cgatttcttc cagagcgcga
     7141 agtcgagcgg atcctccttc gggctcgtgg ccgcgggccc ctcgaccacg atgtcctcga
     7201 acttttggtg cgataggatc ccgaacgatt gtttggcctt ccgggtccgg aagtacactt
     7261 cgccgtccac ggaatacgcg tagccgcggt cgactaggcg ggcgatcaac gcggtgatct
     7321 cgaggatgtg ctcgctgacc ttcggcatgt ggtcggcggg ccggacgttc aaggcgcgca
     7381 tgtcgtcgag gaacgaatcg atgtagtatt gggcataggc gagcggctcc ttcccggcct
     7441 ccttcgcccg gcggatgatc acttcctcga tgtccgtgaa gttcacgacg taggtgaccc
     7501 ggtatccgag gaattcaaga tacctccggg ccgtgtcgaa atcgatgtag gaccgggcgt
     7561 ggccgaggtg gctgtagtcg tacgtcgtcg ggccgcagac gtacatcttg acgcggccgg
     7621 ccacacgcgg tgcaaacgtc tctttcttct gcgtgcgggt gttgtacaaa cggaggacca
     7681 tacggtcgca cacgcggcca cgggagcggc gctattaagc cctttacccg ccgacgcaac
     7741 gggccctcgt cgcgagcgaa ccttcgcatc gaaacctatt tcgtgcgccg ggatttgtca
     7801 tcgtccgctg ggccgataga tcagcggaag atcgccgcct tcgcaaggcg gaagccgtgg
     7861 gttcaaatcc cactcggtcc atccatcccc ggcctggcgg cgcaacgacc gtgacgcacg
     7921 cccgggattc ggccctacgc ggtttctcgc gcgatcacga cgctcttgac ccgcggggc
//
LOCUS       DATLMA010000505         1405 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_589096, whole genome shotgun sequence.
ACCESSION   DATLMA010000505 DATLMA010000000
VERSION     DATLMA010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589096"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VNA10_06475"
     CDS             <1..780
                     /locus_tag="VNA10_06475"
                     /inference="COORDINATES: protein motif:HMM:NF016145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HVG37360.1"
                     /translation="AGPLAHPLSRWIVKSAISLADYRSYRDSFSKDYLARIGVQTQTD
                     SVYPDLAFSLRPEVPSSPRRNGTARVVGVGLMDYYGRRSRPEEGDDVYRRYLEKMTAF
                     VGWLLDRDYTVQLLIGDVSYDTRIRRDLGAMLRERDPGRAKGKLVDAEVSSVEQLVAQ
                     LAKTDIVVATRFHNVLLAVMLDKPVVALGYHEKIASLMAGVGLSDYCEDIDAPGVDGL
                     VDRFTRLERNAGAVRSLMDRKAEEYRNALDEQYARIASLFA"
     gene            792..>1405
                     /locus_tag="VNA10_06480"
     CDS             792..>1405
                     /locus_tag="VNA10_06480"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HVG37361.1"
                     /translation="MPGPVLETVAKARMLGKSPVGAYLRLNEWIWRRIPPSIAALRPV
                     DSYGRFLHSLARQADREMYLGTFFFRNRPELELIRQLWEPIARRRPVKIAVLGCSNGA
                     EVYSIRWTLRSMRPGAQLVMHAVDISTTALECAREGVYSRGVSDLVHEPICALMTEEE
                     IEEMFDGDGERLSIKPWIKEGITWHAGDAGDPRMREALGPQDIV"
BASE COUNT          239 a          464 c          466 g          236 t
ORIGIN      
        1 gccggtccgc tcgcccaccc gctcagcagg tggatcgtca agtccgccat ctccctggcg
       61 gactaccgat cctaccgcga cagcttctcg aaagattacc tcgcccgcat cggcgtccag
      121 acccagaccg attcggtcta ccccgatctg gccttcagct tgaggccgga ggtcccttcc
      181 tccccacggc gaaacgggac tgctcgcgtc gtcggcgtcg gcctgatgga ctactacggg
      241 aggcgcagcc gcccggagga gggcgacgac gtctatcgac gttacctgga gaagatgacc
      301 gcgttcgtcg gctggttgct cgaccgcgac tacaccgtcc agctgctcat cggcgacgta
      361 tcctacgaca cgcgcatccg gcgggacctg ggagcgatgc tgcgggagcg ggatccgggc
      421 cgggcgaagg gcaagctcgt cgacgccgag gtctcctccg tcgagcagct cgtcgcacag
      481 ctcgcgaaga ccgacatcgt cgtcgccacg cggttccaca acgtcctgct tgcggtgatg
      541 ctcgacaagc ccgtcgtcgc gctcggctac cacgagaaga tcgcttcgtt gatggccggg
      601 gtcgggttgt ccgactactg cgaggacatc gacgcgcccg gcgtggacgg gctggtcgat
      661 cgattcaccc gtctcgagcg gaacgcaggg gccgtccgat cgctcatgga ccggaaggcg
      721 gaggagtatc ggaacgcgct cgacgagcag tacgcgcgca tcgccagcct tttcgcgtga
      781 taatgggtcc gatgcccgga ccggtgctgg agacggtggc gaaggcgcgc atgctgggga
      841 agtccccggt gggcgcatac ctgcggctga acgaatggat ctggcgccgg ataccgccct
      901 cgatcgccgc cctccggccg gtcgattcgt acggccgctt cctgcattcc ctggcccgtc
      961 aggccgatcg agagatgtac ctcggcacct tcttcttcag gaaccggccc gagctggaat
     1021 tgatccgcca gctttgggaa ccgatcgcca ggcggcgtcc cgtgaagatc gccgtcctcg
     1081 ggtgcagcaa cggggccgaa gtgtattcaa tccgctggac gctccgctcg atgcgaccgg
     1141 gcgcccaact cgtcatgcac gccgtggaca tctccacgac ggccctggag tgtgcgcgcg
     1201 aaggagtcta ctcgcgcggc gtctccgatc tggtccacga gccgatctgc gcgctgatga
     1261 ccgaggagga gatcgaggag atgttcgacg gcgacggcga gcggttgtcc atcaagccat
     1321 ggatcaagga agggatcaca tggcacgccg gcgatgccgg ggacccgcga atgcgcgagg
     1381 cgttgggacc ccaggacatc gtcat
//
LOCUS       DATLMA010000506         1358 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_773797, whole genome shotgun sequence.
ACCESSION   DATLMA010000506 DATLMA010000000
VERSION     DATLMA010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773797"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..317)
                     /locus_tag="VNA10_06485"
     CDS             complement(6..317)
                     /locus_tag="VNA10_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37362.1"
                     /translation="MPISILEAVVAVGGASLVSFLIFRFVKARWTPLAILGVFWATGI
                     VVGPLTNHTFIQPADLFDTSELHHDQIVALLGVLGIVGAVWAELRLRRATRAKTIASQ
                     A"
     gene            complement(506..799)
                     /gene="albA"
                     /locus_tag="VNA10_06490"
     CDS             complement(506..799)
                     /gene="albA"
                     /locus_tag="VNA10_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015859165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006325 - chromatin organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein Alba"
                     /protein_id="HVG37363.1"
                     /translation="MSRRGRFTVEPGVVYIGKKPTMNYVLAVVTHFNGGSREVVVRAR
                     GRSISRAVDVAEIVRGRFIPDAEVRDVRIATEKVTAEDGRATNVSAIEIVLSK"
     gene            909..1076
                     /locus_tag="VNA10_06495"
     CDS             909..1076
                     /locus_tag="VNA10_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008441126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit Sec61beta"
                     /protein_id="HVG37364.1"
                     /translation="MARDRDSGFHSAAGLIRYFDQEDEKALKVNPWIVVALCVVLSAL
                     VLYVTYSWPLG"
     gene            1138..>1358
                     /locus_tag="VNA10_06500"
     CDS             1138..>1358
                     /locus_tag="VNA10_06500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37365.1"
                     /translation="MEDDAARTFLRLASALDRRSRARDGTRLTPWNLDPVRLAPLRSW
                     PEIEEVLERLRRLTRKEPSGFRRAWLEDHL"
BASE COUNT          249 a          451 c          414 g          244 t
ORIGIN      
        1 ccggttcacg cttgcgaggc gatcgtcttc gcgcgagttg ccctacgcaa gcggagttcg
       61 gcccacacgg cgccaacgat tccgaggacc cccaggaggg caacgatctg atcgtgatgc
      121 agctcgctcg tgtcgaagag atcggcgggc tggatgaaag tatgattcgt gagcgggccc
      181 accacgatgc ccgtcgccca gaacacgccg aggatcgcga ggggtgtcca ccgtgccttc
      241 acaaagcgga agatgagaaa gctgacgagg gaggccccgc ctaccgcgac gacggcttcg
      301 agaatcgaga ttggcatcag ggttacgatg ctcggtcacc ttaagtgcct tacgaatcaa
      361 cccgctcaga tcgaatcaaa tcggcacatc ttcggcgagg acggcgcgtc tgccggggca
      421 ggaccgacag cgaacgacac ctcgacgttt cgattcttga tcgtccgaag cgggcacggc
      481 tatgcctttc ccttccgggg acagctcact tcgacaacac gatctcgatg gcgctcacgt
      541 tcgtcgctcg gccgtcctcg gcggtcacct tctcggtcgc gatgcgaacg tcccgcacct
      601 ccgcgtccgg gatgaatcgg ccccgaacga tctccgcgac atcgacggcc cgggagatcg
      661 aacgcccacg cgcccgcaca actacctcac gggagccacc gttgaaatgg gtgacgaccg
      721 cgaggacgta attcatggtc ggcttcttcc cgatgtagac gacgccaggc tcgaccgtga
      781 accgcccccg ccgggacaag gccgaatccg cccgcgtcgt attaagcctc tccgcgcacg
      841 ccttcgagct ctgtggttcg gctcgaaaac gttttaagac cgagtttcct tggtcaatcg
      901 gatcgcgcat ggcacgggac cgtgattccg gtttccactc ggcggcgggc ctcatccggt
      961 acttcgacca agaggacgag aaggccctca aggtgaatcc gtggatcgtc gtcgcgctct
     1021 gcgtcgtcct gtcggccctc gttctctacg tcacgtattc ctggccgctc gggtagaacc
     1081 gctcgaaacc gttttgaccc gcggcccgtt tccgacgagg tgccgccgcg acggccggtg
     1141 gaggatgatg cagctcgcac gttcctccga ctcgcctccg cgctggatcg ccgctcgagg
     1201 gcccgggacg gcacgcgcct cacaccgtgg aacctcgatc cggtccggct cgcgcctctc
     1261 cggtcatggc cagaaatcga agaagtgctc gaacgtctga ggcgcttgac ccgcaaggaa
     1321 ccgagcggct ttcggcgggc gtggctcgag gatcatct
//
LOCUS       DATLMA010000507         1450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_713483, whole genome shotgun sequence.
ACCESSION   DATLMA010000507 DATLMA010000000
VERSION     DATLMA010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713483"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VNA10_06505"
     CDS             complement(<1..378)
                     /locus_tag="VNA10_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019610041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HVG37366.1"
                     /translation="MSPRPKTLDADQTVAAAAQLMRGADIGDVLVVKSDDRLHGILTD
                     RDIVVRVLAEGLDPDQTRVGDICSRVLTTVSPDDGVSHAVRVMREKAIRRLPVEAGGR
                     VIGMLTIGDIAVERDVGSVLADIS"
     gene            complement(896..1072)
                     /locus_tag="VNA10_06510"
     CDS             complement(896..1072)
                     /locus_tag="VNA10_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37367.1"
                     /translation="MKTRLIVFVIGIVTAILGCATKAVEDGQSLHVRVASHSAPASVW
                     YGAITVNPEQVFED"
BASE COUNT          273 a          470 c          426 g          281 t
ORIGIN      
        1 cgagatgtca gcgagcacgg agccgacatc gcgttccacc gcgatgtccc caatcgtcag
       61 catgccgatc acccggccgc ccgcctcgac cggaagccgc cgaatggcct tctcgcgcat
      121 cacccgcacg gcatggctga ccccatcgtc gggcgacacc gtcgtcagga cgcgactgca
      181 aatatcgccg acgcgagtct ggtccgggtc gagcccttcg gccaggacgc ggacgacgat
      241 gtcgcgatcg gtcaagatgc catgcaagcg gtcatcgctc ttcacgacga ggacgtcgcc
      301 gatgtccgcc ccgcgcatga gctgggccgc cgccgccacc gtctggtcgg catccagggt
      361 cttcggtcgg gggctcataa cgtcgcggat gttgtcatgc actggaagtc cttcgttgtc
      421 ccttgggctt actggacgaa cgtcgccttg gcccggcgcg gggagaacat gtatacgctt
      481 cagctgcctc ccatcgtcag gatgagcggc gcgtttacgg aagggcggtt cacgccgcgc
      541 agaacggacg acgccttccg cggaggacgg cgagacttcg aggagtacct cggcacagcg
      601 cacacaatag gccaccgctt cgataacaac cgcacagccc cagcagcact gacgcccgca
      661 gccgacgcat ccgagatcgt cgaagggacg cagaaaagga cttccgcagc gacaagtccc
      721 tttcatgctt gtccacctct ggaacgctcg tcgtccttct ccggcacgtc ttcatcctga
      781 tcgtcttcgc tcgggttatc cgccgtgatg ggttcctgcg ggacttgctc catgagacgc
      841 ttcgggtcct gttcgtcgcc ttgtatgctc atgcgtggcc tcctatacgc gagccttagt
      901 cctcgaacac ctgctcaggg ttcactgtga tcgccccgta ccacacgctc gccggtgcgc
      961 tgtggcttgc cacacggacg tgcaaggact gaccgtcctc taccgccttt gtggcgcatc
     1021 cgaggatcgc tgtgacgatg ccgatcacga acacgatcag ccgtgttttc atgaccaagc
     1081 ctccctcgtc cgcgacgact cagcagatgt cgacgcggtt ggtgagcgga ggaccgcata
     1141 gtgcatgcca ggcgaacgga cggtgcaaaa tcgcagatat tacggcggct tgctttgcga
     1201 ttcctctacg gaatgattct ggattggaag gtactaccgt gtaaatctgc ggagtcggcg
     1261 caccgttcaa cgccaagttc cgacgaccgc cgaacgctgg atcgcgaaag ggatcgtaca
     1321 gcattgtaga acacgtcgaa gggcagtgag actggtccga tatacggttt tggatacccg
     1381 cacgtcgccc ttcgcgttcc ggaacctaga agaattgatc gaaatatccg ccgtctatcc
     1441 ggccgcctgg
//
LOCUS       DATLMA010000508         1507 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_289137, whole genome shotgun sequence.
ACCESSION   DATLMA010000508 DATLMA010000000
VERSION     DATLMA010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289137"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1224)
                     /locus_tag="VNA10_06515"
     CDS             complement(<1..1224)
                     /locus_tag="VNA10_06515"
                     /inference="COORDINATES: protein motif:HMM:NF020489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonyl-tRNA synthetase editing
                     domain-containing protein"
                     /protein_id="HVG37368.1"
                     /translation="MRVLFLHVDYLEYEVKEKALKGVPDVPQSKRHGRIEEALVCFIS
                     AEKRDEANPAGTAIAAAANVADVAGQLRTKRIVLYPYAHLSSSLAAPGPAQELIASLE
                     KELVARGFDVHASPFGYYKSFRVAVKGHPLSELSREIVAETTAEGKEELSTAVKAEAK
                     LVSHWHILEPNGAVHHLSIQDGKVSGFHFEGHDRLRKFATYEMAKSREAKEEPPHVRL
                     MRELELVDYEPGSDPGNLRYYPKGRLIKGLLEEFVTERLREYGTMEVECPVMYDFEHP
                     ALRSYLERFPARQYVVQTPNKRAFLRFSACFGQFLIMKDMVISYKQLPLSLYEMTRYS
                     FRAEQRGEVAGLRRLRAFTMPDCHALVSDIAMAKEELMVRFEVAWNLLQDCGLSIPDD
                     FEVGMRVTKTFWDANK"
     gene            1310..>1507
                     /locus_tag="VNA10_06520"
     CDS             1310..>1507
                     /locus_tag="VNA10_06520"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009857154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HVG37369.1"
                     /translation="MGDTATVWRHRTGEITLDRTRVMGILNITPDSFSDGGRYFDPDA
                     AARHGLEMVEQGADLLDVGGES"
BASE COUNT          255 a          490 c          475 g          287 t
ORIGIN      
        1 cttgttcgcg tcccagaacg ttttcgtcac gcgcatcccg acctcgaagt cgtcgggaat
       61 cgagaggccg cagtcttgga ggaggttcca tgcgacctcg aagcggacca tgagttcctc
      121 cttcgccatg gcgatatcgg acaccagggc gtggcagtcc ggcatcgtga aggcccgcaa
      181 ccgccgcagg ccggccacct cgcctcgctg ttccgcgcgg aacgaatagc gggtcatctc
      241 gtagagcgag aggggcagct gcttgtacga gatcaccatg tccttcatga tcaggaactg
      301 tccgaagcac gcgctaaacc gcaggaaggc gcgcttgttc ggcgtctgga cgacgtactg
      361 cctggccggg aatcgttcca agtatgacct cagcgcgggg tgctcgaagt cgtacatgac
      421 cgggcactcg acctccatcg tcccgtattc ccgcagccgt tccgtgacga actcctcgag
      481 gaggcccttg atcaatcgcc ccttgggata ataccgcagg ttcccggggt cggagccggg
      541 ctcgtagtcc acgagttcga gctcccgcat cagacggacg tggggcggtt cctccttcgc
      601 ctctcgcgac ttcgccatct cgtacgttgc gaatttccgg agccggtcgt ggccctcgaa
      661 atggaaaccg ctcacctttc cgtcctggat cgacaggtga tggacggccc cgttcggctc
      721 caggatgtgc caatgggaaa cgagcttcgc ctccgccttc acggccgtcg agagttcctc
      781 cttgccctcg gcggtcgtct cggcgacgat ttcccgggag agctcgctga gcggatggcc
      841 cttcaccgca acgcggaagg acttgtagta accgaacggc gaggcatgga catcgaaacc
      901 gcgcgcgacg agctcctttt ccagggaggc gatcagttct tgcgcggggc ctggggccgc
      961 gagggacgaa ctgaggtgcg catacgggta gaggacgatc cgcttcgtgc gcagctggcc
     1021 cgcaacgtcg gcgacgttcg cggccgcggc aatcgcggtg cctgccggat tggcctcgtc
     1081 ccgcttctcc gcgctgatga agcagaccag cgcctcctcg atccgaccat gccgctttga
     1141 ttgcggcacg tcggggactc ccttgagcgc cttctccttc acctcgtact cgaggtaatc
     1201 cacatggagg aacaggaccc gcatggtcgc ccgcttatcg ttcgtgggta taaagctcct
     1261 gccgggcctc gcgcaccgtg aaataggaat ccgtccttct tcgtccgcta tgggggacac
     1321 ggccacggtc tggcgtcatc ggaccgggga gatcaccctc gaccggacgc gcgtgatggg
     1381 gatcctcaac atcacgccgg attcgttctc cgacgggggc cgctacttcg acccggatgc
     1441 ggcagcgcgc cacggcctcg agatggtgga gcagggtgcc gatctgctcg acgtcggcgg
     1501 cgaatcg
//
LOCUS       DATLMA010000509         2101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_773987, whole genome shotgun sequence.
ACCESSION   DATLMA010000509 DATLMA010000000
VERSION     DATLMA010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773987"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1266
                     /locus_tag="VNA10_06525"
     CDS             <1..1266
                     /locus_tag="VNA10_06525"
                     /inference="COORDINATES: protein motif:HMM:NF018756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gas vesicle protein GvpD basic region 2
                     domain-containing protein"
                     /protein_id="HVG37370.1"
                     /translation="QTGSKSPHNTKVARHALDQLEGKLEEGKEGEDEEPEAIGSGEVK
                     GNFLEVTLGFDLPELEAAYDFVDDRIPERSLVLIDSIDALAEHYGIPAGRLITVLQKD
                     LVEGSKQNVLYVLESSGETRLDYLGDGVVSLASADHQGRRLRVLTIEKLRGQQIQQHR
                     YLYTLDGGRLTAFDIREEVRPVRPQLWRPAKDLSKDAVSFGLEPLDRLTAGLYRGRVV
                     AFEIANAVPSDYVDWLRTAIICNFVAQGRGVAHVPPRKGSAEFLRELVSPHLPPGAFD
                     SQVRVFESATLGSADVSRTVLHMEGTSVDSDLKWSNVEFQLPKSERPFLAFMAFDTLE
                     SVYGEKVLEQMSGVFSAVRRAKDVFVGFVTPQSASAAKLENLARVVLHLDIINGSVVL
                     YGQKPYTELFGLAWDWSGGVPKADLRPIV"
     gene            1373..1717
                     /locus_tag="VNA10_06530"
     CDS             1373..1717
                     /locus_tag="VNA10_06530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37371.1"
                     /translation="MREKDVSRLLTDEYAERILVATQVTSRSVQEISDKYDIPIAACY
                     RKIHELEEAGFLNVAQIVTTPKGKTMKLYRSLLKSAQLVYQEGIFRVKFEFDVDKEIN
                     GKWIELNAALDS"
     gene            1854..>2101
                     /locus_tag="VNA10_06535"
     CDS             1854..>2101
                     /locus_tag="VNA10_06535"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37372.1"
                     /translation="MEGNTSPENDGFEGTSKLLSPLEASQLLTDEYSAKILLATYKRK
                     ISAQEISQRYGIPIAACYRKIRILEEVGLIQCVERILT"
BASE COUNT          439 a          658 c          645 g          359 t
ORIGIN      
        1 cagaccggtt cgaagtcccc gcacaacaca aaggtcgccc ggcatgccct ggaccagctc
       61 gagggcaagc tcgaggaagg gaaggaaggc gaggacgagg agcccgaggc gattggaagc
      121 ggcgaggtca aagggaactt cctggaggtc acgctcggat tcgacctgcc cgagctcgag
      181 gccgcgtacg acttcgtcga cgaccggatc ccggaacggt ctctcgtgtt gatcgattcg
      241 atcgacgcgc tcgcggagca ctacgggatc ccggctgggc ggctcatcac ggtcttgcag
      301 aaggacctcg tggaagggag caagcagaat gtattgtacg tcctcgagag cagcggcgag
      361 acgcgcctcg attacctggg ggacggcgtc gtcagcctgg cgtccgcgga ccaccagggc
      421 cgccggctcc gggtcttgac gatcgagaag ctccggggcc agcaaatcca gcaacatcga
      481 tacctctaca cgctcgacgg cgggcgcctc acggccttcg acatccggga agaagtccgc
      541 ccagtcaggc cgcaactctg gaggcccgcg aaggacctgt cgaaggacgc cgtcagcttc
      601 gggctcgagc cgctcgaccg gttgacggcg ggactctacc gcggccgcgt cgtcgcgttt
      661 gaaatcgcga acgcggtgcc ctcggactac gtcgactggc tccggacggc gatcatctgc
      721 aatttcgtcg cccagggccg cggcgtcgcc catgtcccgc cgcggaaagg cagcgcggag
      781 ttccttcgcg agctggtgag cccccacctt ccgcccggcg cgttcgactc gcaggtgcgc
      841 gtgttcgagt cagccacgct cggctccgcg gacgtctcgc ggacggtcct ccacatggag
      901 ggcacgagcg tcgactcgga cttgaaatgg tcgaacgtcg agttccaact cccgaaatcc
      961 gagcgtccgt tcctcgcctt catggcgttc gatacgctgg agtccgtgta cggggagaaa
     1021 gtcctcgagc agatgtccgg cgtcttctcc gcggtccgcc gggccaaaga cgtcttcgtc
     1081 ggattcgtga cgccgcagag cgcgtccgcg gcgaaactgg agaacctggc ccgggtcgtg
     1141 cttcacctgg acatcatcaa cggttccgtg gtcctctacg gtcagaagcc gtacacggag
     1201 ttgttcggcc tcgcctggga ctggtccggc ggggtcccga aagcggacct gcgcccgatc
     1261 gtgtgacggg atccgatccc ccctaaaatc ggccccgtcc tcccgatccg cgagtatcaa
     1321 aaccgagaac cggatagaag agtcattaat agccatcact gaatcgagag caatgcgaga
     1381 aaaggacgtc tcgcgcttgc tcacggacga gtacgcggag cggattctcg tagcgactca
     1441 agtcacgtcg cggtccgtcc aagagatcag cgacaagtat gacatcccga tcgccgcctg
     1501 ttatcggaag atccacgagc tcgaggaagc cggcttcttg aacgtcgcgc agatcgtgac
     1561 gacgccgaaa ggcaagacga tgaaactgta ccggtccctc ctgaaatccg cgcaactcgt
     1621 gtaccaggaa ggcatcttcc gagtcaagtt cgagttcgat gtcgacaaag agatcaacgg
     1681 caagtggatc gaactgaacg cggcgctcga ctcctgattc gcgcgcgtgc gcgcgcgttt
     1741 ccggtgccct gataatcaaa cgccaaaacg agttttttgt ctgataatca agcgcgatag
     1801 cttaaatatc ccggggaatc atcgacgccg cagaactgtg cggggtcggt accgtggagg
     1861 gaaacaccag cccggaaaat gacggattcg aagggacctc aaagttgctt tcgcctcttg
     1921 aggcgtccca gcttctgacc gacgaataca gcgccaagat ccttctcgcc acatacaagc
     1981 ggaaaatcag tgcccaggag atcagccagc gatacggcat cccgatcgcc gcatgctacc
     2041 gcaagatccg aatcctcgaa gaggtcgggc tcatccagtg cgtcgaacgc atcctcaccc
     2101 a
//
LOCUS       DATLMA010000510         1041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_890083, whole genome shotgun sequence.
ACCESSION   DATLMA010000510 DATLMA010000000
VERSION     DATLMA010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890083"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..>1041)
                     /gene="dnaA"
                     /locus_tag="VNA10_06540"
     CDS             complement(88..>1041)
                     /gene="dnaA"
                     /locus_tag="VNA10_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011954804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HVG37373.1"
                     /translation="AALSVAERPGHSYNPLFIYGGSGLGKTHLMHAIGHAVVGRHPKK
                     KVAYATSEKFTNEFINSIRAQKGEEIRERYRRIDVLLIDDIQFIAGKEGTQEEFFHTF
                     NAIHEEGKQIVMSSDRPPKAITQLEDRLRSRFEWGLTADISAPDLETRIAILRAKAEA
                     QNVAVPPPVIDFLAQRIVSNIRELEGALTRIVAFAALQAVPVTTQLAQEMLQNLLYNP
                     HRKSLSPERIVETVARYYGVPLDQIKGKARDKQVVLPRQIAMYLMREETEAPLLRIGE
                     ALGGRDHSTVLHGCEKIEREMAENDDFRRDVGALREMLYTE"
BASE COUNT          162 a          316 c          351 g          212 t
ORIGIN      
        1 cgcttatcca cacagataga ggccttatcc acacgtgggg tcctgggaga aacggccgaa
       61 ttttcgggag attttcgcgg gagagcccta ctcggtgtaa agcatctccc ggagggcacc
      121 gacgtcgcgc cggaagtcgt cgttctcggc catctcgcgc tcgatctttt cgcagccgtg
      181 cagcacggtc gagtgatcgc gcccgccaag ggcctcgccg atccggagga gaggagcttc
      241 ggtctcctcg cgcatgagat acatcgcgat ctggcgtggg aggacgacct gcttgtcgcg
      301 cgccttgcct ttgatctggt ccagcgggac gccgtagtag cgcgcaaccg tctcgacgat
      361 gcgctccggc gagaggcttt tgcggtgcgg gttgtacagg aggttctgga gcatctcctg
      421 cgcgagctgg gtcgttacgg gcacggcctg caaggccgcg aacgcgacga tccgcgtgag
      481 cgcgccctcg agctcgcgga tgttcgacac gatgcgctgc gccaggaagt cgatcaccgg
      541 cggcggcaca gcgacgttct gagcctctgc tttcgcgcgg aggatggcga tccgcgtctc
      601 gagatcgggc gccgagatgt cggcggtgag gccccactcg aaacgagatc ggagccggtc
      661 ctcgagttga gtgatcgcct tcggcgggcg gtcgctcgac atgacgatct gcttgccctc
      721 ttcgtggatc gcgttgaagg tgtggaagaa ctcttcctgc gtgccctctt ttccggcgat
      781 gaattgaatg tcgtcgatga ggagcacgtc gatcctccgg tatcgctcgc ggatctcctc
      841 gcccttctgc gcgcggatgg agttgatgaa ctcgttcgtg aatttctcgc tcgtcgcgta
      901 cgcgaccttc ttcttcgggt gccggccgac cacggcatgc ccgatggcgt gcatgaggtg
      961 cgtcttgccg aggcccgatc cgccgtagat gaacagcggg ttgtacgaat ggccggggcg
     1021 ctcggccacg gacagcgccg c
//
LOCUS       DATLMA010000511         3158 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_413591, whole genome shotgun sequence.
ACCESSION   DATLMA010000511 DATLMA010000000
VERSION     DATLMA010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413591"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1552)
                     /locus_tag="VNA10_06545"
     CDS             complement(<1..1552)
                     /locus_tag="VNA10_06545"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HVG37374.1"
                     /translation="MIAYEWVVWLILLLPLGAFLVIGLVGRRLPEGGGHVAVGAMAGS
                     FVLSMYVFFQVLQQGGLGGGFVPQTIPGYVWIPSLLPENSIKISLLIDNLSSLMLVLV
                     SFLCLLIFVYSLGYMHEEDGKARYYAEVSLFATGMLGTVSADNFLQLLIFWEIMGLCS
                     YLLIGFWYSKPEAAAAAKKAFLVTRVGDVLFLVGVLVIWNVFGTLSFAEIQGKMASLY
                     PNTLTPQLLTLIPLLLFGGAVGKSAQFPLHAWLPDAMEGPTTVSALIHAATMVKAGVY
                     LTARAFIFLVPLSSAIQPPFTAILVIAAIGGFTTLFAATMAVVNFDIKRVLAFSTISQ
                     LAYMFLGLGAGAYTMANEVSRGEAVDSAGYSAALYHLFNHAFFKALLFLGAGSVIHAV
                     NTNDMREMGGLSKHLPITSKVMLFGGLALAGIVPFSGFFSKGEILSVTFDAGAANPGF
                     YWLWAIGVGTAFLTAFYTFRLWFMTFHGEYRGHDHPHESPRVMTAPLIILAGFTLVSG
                     LLAYPMGGF"
     gene            complement(1556..1858)
                     /gene="nuoK"
                     /locus_tag="VNA10_06550"
     CDS             complement(1556..1858)
                     /gene="nuoK"
                     /locus_tag="VNA10_06550"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HVG37375.1"
                     /translation="MIPLQYELLLSAMLLCIGLYGVLARRNGIIVLMSIEIILNASIL
                     NFVAFSSYSGNASGQVFALLGIAVAAAEAAVGLAVFLSIYQTHGTIELDKVRFLKW"
     gene            complement(1855..2124)
                     /locus_tag="VNA10_06555"
     CDS             complement(1855..2124)
                     /locus_tag="VNA10_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37376.1"
                     /translation="MNARQFLVVLAATALFLVMAASFLGNVNWPNSPTSIPVYDPNAT
                     SNNGIANQMFEGFAITIILIAILLAAAMIGGVYLAKMDEPGKVGP"
     gene            complement(2121..2366)
                     /locus_tag="VNA10_06560"
     CDS             complement(2121..2366)
                     /locus_tag="VNA10_06560"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HVG37377.1"
                     /translation="MSAFEVIGSILVVINKRMVRAAFWLAMTLVTIGAIYLLFQSEFV
                     FLIQIIVYAGAVPVLFVFGIMLTRRTIMDEPGPEGGP"
     gene            complement(2448..>3158)
                     /locus_tag="VNA10_06565"
     CDS             complement(2448..>3158)
                     /locus_tag="VNA10_06565"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HVG37378.1"
                     /translation="FIFAAFSLAPLGILIAGWSANNKYTLVGGLRAAAMLMAYEIPMI
                     LSVIALVFFTGSLNPLTIVKQQERTLFSLGPLAIPAWYLFSPQILGFVVFSVSMMAEM
                     ERIPFDIPEAEAELVEGWTTEYSGMRFGLVFGFKWLRMIAGAALIAILYLGGWSGPVF
                     VTLSVGGVPVPIVPEEAWFLLKIYLISIVFIWISWSVPRVRIDQILNIGWKKLIPYSL
                     GAIIIAAAAIASGLWAVG"
BASE COUNT          680 a          974 c         1050 g          454 t
ORIGIN      
        1 cgaatccgcc catcgggtag gcgaggagcc cggagacgag cgtgaatccc gcgaggataa
       61 tcaacggcgc cgtcatcacg cgcggcgact cgtggggatg gtcatggccg cggtactccc
      121 cgtggaacgt catgaaccac aggcggaatg tgtagaaggc agtcaggaac gcggtgccga
      181 cgccgatcgc ccagagccag tagaacccgg gattcgcggc acccgcgtcg aaggtgacgg
      241 acaggatctc ccctttcgag aagaacccgc tgaagggcac gatgccggcg agggcgagac
      301 cgccgaagag catgaccttc gaggtgatcg gcagatgctt cgagagaccg cccatctccc
      361 gcatgtcgtt cgtgttgacg gcgtggatca cgctgccggc gccgaggaac aggagggcct
      421 tgaagaacgc gtggttgaac agatggtaca gcgccgcgct gtatccggcc gagtccacgg
      481 cctccccacg ggagacttcg ttcgccatcg tgtatgcgcc ggcgccgagg ccgaggaaca
      541 tgtaggcgag ctgggagatc gtcgagaacg cgaggacccg cttgatgtcg aagttcacga
      601 cggccatcgt cgcggcaaag agggtcgtga aaccgccgat cgcggcgatc acgaggatcg
      661 cggtgaaggg cggctggatc gccgaggaca aggggaccag gaagatgaac gcccgggcgg
      721 tcaggtagac gccggccttg accatcgtcg ccgcgtggat caacgcactg accgtcgtcg
      781 ggccttccat cgcgtccggg agccacgcgt ggagcgggaa ctgcgcgctc ttgccgacgg
      841 ccccgccgaa caacaggagc gggattaagg tcaggagctg cggcgtgagg gtgttcgggt
      901 agaggctcgc catcttgccc tggatctcgg cgaaggacag ggtgccgaac acgttccaga
      961 tgaccaggac gcccacgaga aacaggacgt cccccacccg ggtcacgagg aacgccttct
     1021 tcgcggccgc ggccgcctcc ggcttcgagt accagaagcc gatgagcagg tacgagcaca
     1081 ggcccatgat ctcccagaag atcaggagct gaaggaagtt gtccgcgctc acggtcccga
     1141 gcatgcccgt cgcgaacagg ctgacttccg cgtagtaccg ggccttgccg tcctcctcgt
     1201 gcatgtagcc gagcgagtac acgaaaatca ggagacacag gaacgacacg aggaccagca
     1261 tcagcgagct caggttgtcg atcaggagcg aaatcttgat cgagttctct gggaggaggc
     1321 tcgggatcca gacatagccc gggatcgtct gcgggacgaa gccgcctcca agcccgcctt
     1381 gctgcaggac ctggaaaaag acgtacatcg agaggacgaa cgatcccgcc atggcgccga
     1441 cggcgacgtg gccgccgccc tccggcagac gccggccgac gagaccgatg acgaggaacg
     1501 ccccgagcgg caacaacagg atgagccaga cgacccactc gtacgcgatc acgactcacc
     1561 acttcaggaa acggaccttg tccagttcga tcgtcccgtg ggtctggtag atcgacagga
     1621 acacggcgag tccgaccgcg gcctcggctg cggccaccgc gatcccaagg agcgcgaaga
     1681 cctggccgct cgcattgccg ctgtacgaac tgaaggcgac gaaattcagg atcgaggcgt
     1741 tcaggatgat ctcgatcgac atcaggacga tgatcccgtt ccggcgggcg aggacgccgt
     1801 acaggccgat gcagaggagc atcgcggaca aaagcaattc gtactgaagc ggaatcacgg
     1861 gcccaccttc ccgggctcgt ccatcttggc gaggtagacc ccgccgatca tcgcggccgc
     1921 gagcaggatg gcgatcagga tgatcgtgat cgcgaagccc tcgaacatct gattcgcgat
     1981 cccgttgttc gacgtcgcgt tcgggtcgta gaccgggatc gaagtcgggg agttcggcca
     2041 gttcacgttc cctaggaacg acgccgccat gaccaggaac aaagccgtcg ccgcgaggac
     2101 gacgaggaac tgccgcgcgt tcacggtccg ccctccggtc ccggctcgtc catgatcgtc
     2161 cgccgggtga gcatgatccc gaagacgaag agcacgggca ccgcgccggc gtacacgatg
     2221 atctggatga ggaacacgaa ctcgctctgg aagaggaggt agatcgcgcc gatcgtcacg
     2281 agggtcatcg cgagccagaa ggccgcgcgg accatccgct tgttgatgac gaccaggatc
     2341 gagccgatga cctcgaaggc gctcaagacg aagaacgcga tgagcgtcca gtcaacgtcg
     2401 accgcgtgtc tccctcccga tgacgcgttc ccggtccgac acgccgctca ccccacggcc
     2461 cagagacccg acgcgatcgc ggcggccgcg atgatgatgg ccccgaggga ataggggatg
     2521 agcttcttcc acccgatgtt caggatctgg tcgatccgca cgcgcggcac ggaccacgag
     2581 atccagatga agacaatcga gatcaggtag atcttcagga ggaaccaggc ttcctccggg
     2641 acgatcggca cggggacgcc gccgacggac agggtcacga agacgggtcc gctccagccg
     2701 ccgaggtaga ggatcgcgat gagcgcggcg ccggcgatca tccggagcca cttgaatcca
     2761 aacacgagtc cgaaccgcat gcccgagtac tccgtcgtcc agccttcgac gagttcggcc
     2821 tccgcttccg ggatgtcgaa cgggatgcgc tccatctccg ccatcatcga cacgctgaac
     2881 acgacgaaac cgaggatctg aggcgagaag aggtaccacg ccgggatggc gagcggcccc
     2941 aaggaaaaga gcgttcgttc ctgttgcttc acgatcgtca aggggttgag ggagcccgtg
     3001 aagaacacga gggcgatgac cgagaggatc atcgggatct cgtaggccat gagcatcgcc
     3061 gcggcgcgca gcccgccgac gagggtgtac ttgttgttcg ccgaccagcc cgcgatcagg
     3121 atgccgaggg gcgcgagcga gaacgcggcg aagatgaa
//
LOCUS       DATLMA010000512         1012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_229009, whole genome shotgun sequence.
ACCESSION   DATLMA010000512 DATLMA010000000
VERSION     DATLMA010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229009"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..862
                     /gene="trxB"
                     /locus_tag="VNA10_06570"
     CDS             <1..862
                     /gene="trxB"
                     /locus_tag="VNA10_06570"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HVG37379.1"
                     /translation="SNLKTLVIAGAVAGGQLMITTDVENYPGFPKGVQGPELMELWRQ
                     QAERFKADFVDDNVSKVDFSKRPFKVWTSDGMHEGRSVIIATGANAKYLGLPNEERLK
                     GRGVSACAVCDGFFFKGLDVAVVGGGDTAMEDSLFLSKLCKTVTVVHRRHEFRASKIM
                     QDRLFKTPNIKVIWDSEVVDVIGDAKVEGVRIKNKKTGHTSDLKAQGLFLAIGHEPAT
                     EILRDQLKLDKGYVVLRPHDGLSTATSVDGVFAAGDVHDFRYRQAVTAAGFGSMAALD
                     AERWLSQSNA"
BASE COUNT          207 a          302 c          326 g          177 t
ORIGIN      
        1 gtcgaatctg aaaaccctcg tcatcgcagg cgccgtcgcg ggcggtcagc tcatgatcac
       61 cacggacgtc gagaactatc ccggcttccc gaaaggcgtc caaggacccg agctcatgga
      121 gctctggcgt cagcaggcgg aacggtttaa ggcggacttc gtggacgaca acgtctcgaa
      181 ggtggacttc tcgaaacggc ctttcaaagt ctggacgtcc gatggaatgc acgagggccg
      241 ctcggtgatc atcgcgacgg gcgcgaacgc gaagtacctc gggcttccga acgaggagcg
      301 actcaaaggc cggggggtaa gcgcatgcgc agtatgcgac gggttcttct tcaaaggcct
      361 cgacgtggca gtggttggcg gcggcgacac ggcgatggag gacagcctct tcctctcgaa
      421 actctgcaag accgtcacgg ttgtccatcg tcgacacgag ttccgcgcga gcaagatcat
      481 gcaggaccgc ttgttcaaaa cgccgaatat caaggtcatc tgggactctg aagtcgttga
      541 tgtcatcggg gacgcgaagg tcgagggcgt ccgaatcaag aacaagaaaa cgggccacac
      601 ctccgacctc aaggctcaag gattgttcct cgcgatcggc cacgagcccg cgaccgaaat
      661 cttgcgggac cagttgaagc tcgacaaggg ctatgtggtc ctccgaccgc acgacggcct
      721 gtccacagca acatccgtgg acggcgtgtt cgccgcggga gacgttcacg acttccgtta
      781 ccgacaggcc gtgacggcgg cgggttttgg ctccatggcg gcgctcgacg cagagcgatg
      841 gctctcgcaa tcaaacgcct gagcgctccg aaatcttgaa gtcgattcgc ccgttaggca
      901 cccagggacc cgggcatggt gcgcatcttc cgcggcgggg tgctcgacga gcgcttcgaa
      961 ggctcggtcg tcgtgatcgg gccccggccg acgacgatga cggggctcgt tc
//
LOCUS       DATLMA010000513         2191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_835531, whole genome shotgun sequence.
ACCESSION   DATLMA010000513 DATLMA010000000
VERSION     DATLMA010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_835531"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..940)
                     /locus_tag="VNA10_06575"
     CDS             complement(35..940)
                     /locus_tag="VNA10_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HVG37380.1"
                     /translation="MRFLRKGKVKEVYEVSEDELEFVFTDQISVFDKVIPTLIPHKGE
                     TLCRTSAHWFKVVQDLGFRTHFLKVIDGNRMRVRRVQVIPEYDRITPSTRTFLIPLEV
                     IARYYVAGSFHDRMQAGKLRPEDVGFPRGHVPQYGEPLPKAFVEVTTKLEKVDRELTE
                     EEALKISKLSRAEFDVLVETVLKIDDRLNKEVQKRGLIHVDGKKEFAMDDARRLMIVD
                     TFGTADEDRFWDLDAYKKGQQVELSKEFVRQYYRKTGYHQKLMKAREAGKPEPDIPPL
                     PADVAKQVSELYVGLFERLTGEKFR"
     gene            complement(1036..1596)
                     /locus_tag="VNA10_06580"
     CDS             complement(1036..1596)
                     /locus_tag="VNA10_06580"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HVG37381.1"
                     /translation="MRVGILVFDGVEELDAVGVYEVLAKAKQIHPKLDLTVRFRALKE
                     QITGALGMKFLAHEVHHEISDLDLVIVPGGSGRKEVVQDPEFLKRLLDFGTEKPIASV
                     CTGALILGAAGLLAGRKATTHQSAWDELGAIADVVEARVVEDGLVTTAGGVTASIDLG
                     LHLLQKHFGPELAREVEERIEYQRPL"
     gene            complement(1671..>2191)
                     /locus_tag="VNA10_06585"
     CDS             complement(1671..>2191)
                     /locus_tag="VNA10_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37382.1"
                     /translation="EEDADSVIANAASFGWDLPKYIKEKKLHIVKLEPADAKTTVTRI
                     RSELPDFIKRSGASRVAIDSVSLLNMLFADDKERREKLFALCKQLKSTEATCIFTAEV
                     KDDNPRSSRDGLVEYVSDGVIGLRFNERENGEVQLVMQVIKMRRLKHPRSVKPYSITE
                     QGLEVHGDMEVF"
BASE COUNT          365 a          708 c          654 g          464 t
ORIGIN      
        1 aaaagacttt gttccgcgtt tcccaaaacg catcctaacg gaacttttca cccgtgagtc
       61 gctcgaagag gccgacgtac agttcgctga cctgcttcgc gacgtctgcg ggaagcggcg
      121 ggatgtcggg ctccggcttg cccgcctccc gcgccttcat cagcttttga tggtaccccg
      181 tcttgcgata gtactgccgc acgaactcct tgctcagttc gacctgctgc cccttcttgt
      241 atgcatcgag atcccagaag cggtcttcgt ccgccgtgcc gaatgtgtcc acgatcatca
      301 ggcgccgcgc atcgtccatc gcgaactcct tcttgccgtc cacatggatc agaccgcgtt
      361 tctggacttc cttgttgagc cggtcatcga tcttcagcac ggtctcgacg aggacgtcga
      421 actccgcacg gctcagtttc gagatcttca gcgcttcctc ctcggtgagt tcgcgatcca
      481 ctttctccaa tttcgtcgtc acttcgacga acgctttcgg cagcggttcc ccatactgcg
      541 gcacgtggcc ccgcggaaag ccaacatcct ccggccgaag tttgcccgcc tgcatccggt
      601 catggaacga gccggccacg tagtaccggg cgatcacctc gagcggaatc aggaaagtgc
      661 gagtggatgg cgtgattcga tcgtattccg ggatgacctg gacccggcgc acccgcatcc
      721 ggtttccgtc gatgaccttg aggaagtgcg tccggaagcc gaggtcctgg acgaccttga
      781 accagtgcgc cgacgtgcga cacagggttt ctcccttgtg cggaatgagc gtggggatga
      841 ccttgtcgaa cacgctgatc tggtccgtga agacgaactc gagttcgtcc tccgagacct
      901 cgtagacctc cttcactttg cccttgcgga ggaaccgcac ggcgtctccc cgccgcccgg
      961 agacgagcga gaccatttag gggtttgggt gaatccgcta aacggcgcta ggggcactgg
     1021 ccaccggctc aacgctcaca gcggccgctg gtattcgatt cgctcttcga cctcgcgggc
     1081 gagctccggg ccgaagtgtt tctgaaggag atggagtccg agatcgatcg acgcggtgac
     1141 accccccgcg gtggtcacca ggccgtcttc gacgacgcgc gcctcgacga cgtccgcgat
     1201 ggccccgagt tcgtcccacg cgctctggtg tgtggtcgcc tttcgccccg cgaggaggcc
     1261 cgccgcaccc aggatcaagg ccccggtgca gacgctcgcg atcggcttct ccgtcccgaa
     1321 gtcgaggagt cgcttcagga actcgggatc ctgaacgact tccttgcgcc cggaccctcc
     1381 cgggacgatc accagatcga ggtcggagat ttcgtggtgg acctcgtggg cgaggaactt
     1441 catcccgagc gcgcccgtga tttgttcctt cagggcccga aagcggaccg tcaggtcgag
     1501 cttcgggtgg atctgctttg ccttggcgag gacctcgtac acgccgaccg cgtcgagctc
     1561 ctcgacgccg tcgaagacaa gaatgccgac tcgcacggta gcggggtgag cgtcgcctgg
     1621 cttaatcgtt ccgctccgaa tggcggctcg gtcgacccgg ggtcatcggg tcagaacact
     1681 tccatgtcgc cgtggacctc gagtccctgc tccgtgatgc tgtagggttt cacggaccgc
     1741 ggatgcttca gccgtcgcat cttgatcacc tgcatgacca gctgcacctc cccgttctcc
     1801 cgttcgttga agcgcagccc gatgacgccg tcggacacgt actcgacgag accgtctcgg
     1861 gaggaccgcg ggttgtcgtc cttcacctcg gcggtgaaga tgcacgtggc ttcggtcgac
     1921 ttgagttgct tgcaaagggc gaacagcttc tcgcgacgtt ccttgtcgtc cgcgaagagc
     1981 atgttcaaga ggctgactga gtcgattgcg acccgggacg ccccgcttcg cttgatgaag
     2041 tccggaagct cggaccggat ccgtgtgacg gtcgtcttgg catccgcagg ctccaacttg
     2101 acgatgtgga gtttcttctc cttgatgtac ttgggcaggt cccacccgaa cgacgcggcg
     2161 ttcgcgatga ccgagtcggc gtcttcttcc a
//
LOCUS       DATLMA010000514         1011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_170707, whole genome shotgun sequence.
ACCESSION   DATLMA010000514 DATLMA010000000
VERSION     DATLMA010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170707"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VNA10_06590"
     CDS             complement(<1..408)
                     /locus_tag="VNA10_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014183292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HVG37383.1"
                     /translation="MDIEPLKAYTWALLLGLFVPLSWILDLLMRPGVIVFAVAGLAIV
                     PLAWFLGLATEELGKHAGPGVGGLLNATFGNATELIIAIFALSRGLTEVVKASLTGSV
                     VGNLLLVLGLSMLAGGVKYKTQHFSREASGIQIT"
     gene            482..>1011
                     /locus_tag="VNA10_06595"
     CDS             482..>1011
                     /locus_tag="VNA10_06595"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HVG37384.1"
                     /translation="MISPSEMRVLDRNAQYFGVSIMELMENAGKAVADAARSEFGAAG
                     KSVLVLCGTGNNGGDGLVAARHLAKDARVTVLLARSPDQFATPEAAKNFERLRDVQIL
                     AGLDKSEEAIAAADLLIDALLGIGVEGPLREPYAALIRQMNASGKPILSVDVPSGLGT
                     DRAVRPTVTVTLHDVK"
BASE COUNT          198 a          327 c          326 g          160 t
ORIGIN      
        1 cgtgatctgg atcccggatg cctcccggga gaagtgctgc gtcttgtact ttacgccacc
       61 cgcgagcatg cttaacccga ggaccaacag caggttcccg acgacggaac cggtgagcga
      121 cgccttcacg acctccgtca aaccgcgcga tagagcaaag atcgcgatga tgagttcggt
      181 cgcgttcccg aacgtcgcgt tcaggaggcc gccgacgccg ggaccggcgt gtttgccgag
      241 ttcctccgtg gcgaggccga ggaaccaggc gagcgggacg atggcaagac ccgcgaccgc
      301 gaagacgatg acgccgggcc tcataagcag gtccaggatc caactcagtg ggacgaagag
      361 ccccaacagt agcgcccagg tgtacgcctt caacggctcg atgtccatcg ggccccgaaa
      421 tggccgactg ttcttaactc cgcgggcaac gtttaactag cgtcggccga atgcgcgccc
      481 gatgatttct ccctcggaga tgcgcgtcct cgatcggaac gctcagtatt tcggcgtctc
      541 gatcatggag ctcatggaga acgctgggaa agccgtcgcg gacgccgcgc ggtctgagtt
      601 cggagcggcg ggaaagagtg tcctcgtcct ttgtggcacc ggaaacaacg gcggagacgg
      661 cctcgtggcc gctcgccatc tcgcgaagga cgcgcgggtc acggtcctcc tcgcacgatc
      721 gcccgaccag ttcgccaccc cggaggcggc gaagaacttc gagcgactga gggacgttca
      781 gatcctggcg ggcctcgaca agagcgagga agcgatcgcg gctgcggacc tgctgatcga
      841 cgcactcctc ggaatcgggg tggaaggacc tctacgcgaa ccctacgccg cgctcatccg
      901 ccagatgaat gcctccggca agccgatcct cagcgtggac gtcccgagcg gcctcggtac
      961 ggatcgggcc gtccgaccga cggtcacggt caccctccac gatgtgaagg a
//
LOCUS       DATLMA010000515         1153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_590494, whole genome shotgun sequence.
ACCESSION   DATLMA010000515 DATLMA010000000
VERSION     DATLMA010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590494"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /gene="moeB"
                     /locus_tag="VNA10_06600"
     CDS             complement(<1..1055)
                     /gene="moeB"
                     /locus_tag="VNA10_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020718100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HVG37385.1"
                     /translation="MAAVRIIIPTALRQYAANHDAVEVEADSVEQALGDLVDQFGQLR
                     RHLYADDGQLRNFVNVYVNEEDIRYLEKDATTLKPGDTISIVPSIAGGSFSLMDRLAS
                     KRKDVLMPAEIKRYSRHLILPEVGMAGQLRLKQSSALIIGAGGLGVPLTQYLGAAGVG
                     RLGIVDFDVIDETNLQRQVLYGTKDVGRKKIDVAKERVAQINPNVDVQTYETRLTSDN
                     ALDILKDYDVVIDGTDNFPTRYLVNDATVLLKKPNVYGSIFRFEGQASVFHATRGPCY
                     RCLYSEPPPPGLVPSCAEGGVLGVLPGIIGSIQAMETIKLILGAGQPLIGRLVLFDAL
                     KLQFRELKLEKDPDCPV"
BASE COUNT          209 a          355 c          359 g          230 t
ORIGIN      
        1 cagactgggc aatcaggatc cttctccagc ttgagctccc ggaactgcag cttcagcgcg
       61 tcgaacagga ccaggcgtcc gatgaggggc tgacccgctc ccaggatgag cttgatcgtc
      121 tccatcgcct ggatcgagcc gatgatgccc gggaggacgc cgagcacgcc gccttcggca
      181 cacgagggga cgagtcccgg tggcggcggc tccgaataga gacagcggta gcagggcccc
      241 cgggtggcgt ggaataccga cgcctggccc tcgaatcgga agatcgagcc gtagacgttc
      301 ggtttcttca ggaggaccgt cgcatcgttc acgaggtacc gggtcgggaa gttgtccgtc
      361 ccgtcgatga ccacgtcata gtctttcagg atgtccagcg cgttgtccga cgtcaggcgg
      421 gtctcgtacg tctgcacgtc gacgttcggg ttgatctgtg cgacccgctc cttcgcgacg
      481 tcgatcttct tccgcccgac gtccttcgtg ccgtacaaca cctggcgctg gaggttcgtc
      541 tcatcgatca cgtcaaagtc gacgattcca agacggccga cgccagcggc gccgaggtat
      601 tgcgtgagcg ggactccgag cccgcccgcg ccaatgatca gggcggacga ctgcttgagc
      661 ctcaactgcc ccgccatccc gacttcgggg aggattagat ggcgagagta ccgcttgatt
      721 tcggccggca tcaaaacgtc tttgcgcttc gaagcgagcc ggtccatcaa ggaaaacgaa
      781 ccgccggcga tgcttgggac aatcgaaatc gtgtcacccg gcttgagggt cgtcgcatct
      841 ttctcgagat agcggatgtc ctcttcgttc acgtagacgt tcacgaaatt tcgcaactgc
      901 ccgtcatcgg cgtataggtg ccgccgaagc tggccgaact ggtcgaccag gtcgccaagg
      961 gcctgttcga cgctgtccgc ctcgacctcc acggcatcgt gattcgcggc gtattggcga
     1021 agcgccgtcg ggatgatgat tcggaccgcg gccatggtcg tatcggtttc atgacggtgt
     1081 tatacttaag gttcgccccg cccctattcg tatccgaatg acgggagaag acgcggcctc
     1141 gatccgcggt gca
//
LOCUS       DATLMA010000516         1014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_170933, whole genome shotgun sequence.
ACCESSION   DATLMA010000516 DATLMA010000000
VERSION     DATLMA010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170933"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..227
                     /locus_tag="VNA10_06605"
     CDS             15..227
                     /locus_tag="VNA10_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013492291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HVG37386.1"
                     /translation="MTAEAVAGAHAKDVAVQGKHGVRYLKYWFGEKTGRVHCLCEAPS
                     KEAAEAVHREAHGLVADEIVEVKEGS"
     gene            complement(263..838)
                     /locus_tag="VNA10_06610"
     CDS             complement(263..838)
                     /locus_tag="VNA10_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG37387.1"
                     /translation="MKFAFIGTHGVGKTTLCFELAALLKKRDRIVEMVHEVARFCPLP
                     INRGTTIDAQSWILHTEIASELEAAHKAEIVICDRSVLDNFCYLLSAGRAPVLEPLVR
                     WWTATYQLLIKVPIVSPPGFDGLRDTDTTFQRAIDEKIESILSEWGIPALRLQKDRRP
                     FWATDSLEAILPLLGPVQEQLFDATSSEAAR"
BASE COUNT          189 a          309 c          357 g          159 t
ORIGIN      
        1 agaaggtcga agggctgacc gcggaagcgg ttgcaggcgc tcacgcgaag gacgtggcgg
       61 tccagggcaa gcacggagtg cgctatctga agtactggtt cggcgaaaag accggtcgag
      121 tccattgcct ctgcgaggct ccgagcaagg aagcggcgga ggcggtccac cgcgaggcgc
      181 acggcctcgt cgcggacgag atcgtggagg tcaaggaagg gtcgtagccg cccgaccgag
      241 aacgagcggc ccgacgcgcg gcctaccggg ccgcttccga cgaggtcgcg tcgaagagct
      301 gctcctggac cggcccgaga agaggcagga tcgcttcgag cgagtcggtc gcccagaagg
      361 ggcggcggtc cttctggagc cgcagcgccg gaattcccca ctccgagagg atcgactcga
      421 tcttctcgtc gatcgcgcgc tggaacgtgg tgtcggtgtc gcgcagaccg tcgaagccgg
      481 gcgggctgac gatcggaacc ttgatcagca gctggtaggt cgcggtccac caccggacga
      541 gcggctcgag caccggcgcg cgaccggccg agagcaggta gcagaagttg tcgagcacgc
      601 tgcgatcgca aatgacgatt tccgccttgt gcgccgcctc gagctccgac gcgatctccg
      661 tgtgaaggat ccaggattgc gcgtcgatgg tcgtgccgcg gttgatcggc agaggacaga
      721 agcgagcgac ttcgtgaacc atctcgacga tccggtcgcg cttcttgagc agggcggcga
      781 gctcgaagca gagcgtcgtc ttgccgacgc cgtgcgttcc gatgaaggcg aacttcattc
      841 cctcatcctg tcatcccgag cgaagcgagg gatcttacag actgccgaga ttcctcggcc
      901 cttcgggcct cggaatgaca gaggcaccct acgggcctcg gaatgacggc gggagtggga
      961 gcccgaactc cttgcggagc tcatcccctt ccccgtcgag cttcggagga aatc
//
LOCUS       DATLMA010000517         1078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_48024, whole genome shotgun sequence.
ACCESSION   DATLMA010000517 DATLMA010000000
VERSION     DATLMA010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48024"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VNA10_06615"
     CDS             <1..468
                     /locus_tag="VNA10_06615"
                     /inference="COORDINATES: protein motif:HMM:NF014554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate--acyl-ACP acyltransferase"
                     /protein_id="HVG37388.1"
                     /translation="IALLSNGEEEGKGDERVKETARRLKGTLPGFVGNVEPKDIYGAR
                     ADVIVADGFVGNVAIKMAEATADFLFRNLRDEIPKTMRGKLGGMLIRPGVRQLRARID
                     WREFGGAPLLGIDGVAVIAHGRSDARAIKNAVRVTRDAVQNQLVGKIRAEVGS"
     gene            504..>1078
                     /locus_tag="VNA10_06620"
     CDS             504..>1078
                     /locus_tag="VNA10_06620"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HVG37389.1"
                     /translation="MGTVNPLGKNLEEYWDGLIEGRSTARFAEGYPTEKLTTKFACEV
                     PNFDPQDFMDRKAAQRMARFSQMAVAASTMALADSGLDLAKEDDFRVGVDMGTGIGGF
                     IEMTQGAISYATKGRLNPLYAPMIIPNMAAASVAMAFHLRGPNTTVTTACAASTHTLG
                     DASRIIQHGDADVMLAGGSEASLCEVGISSF"
BASE COUNT          211 a          316 c          375 g          176 t
ORIGIN      
        1 atcgcactcc tgagcaacgg cgaggaggag ggcaagggcg acgagcgggt caaggagacg
       61 gcccggcgcc tgaaggggac actccctgga ttcgtcggaa acgtcgagcc gaaagacatc
      121 tacggagcgc gggcggacgt gattgtcgcg gatggttttg tcggcaacgt cgcgatcaag
      181 atggcggagg ccactgcgga ctttcttttc cgcaaccttc gcgacgagat ccccaagacg
      241 atgcgcggca agcttggagg catgctcata cggcccggcg tgcgccagct gcgcgcacgg
      301 atcgactggc gcgagttcgg cggcgcgcct ttgctcggca tcgacggcgt ggcggtgatc
      361 gcccacggac gctcggacgc ccgggcgatc aagaacgcgg tccgggtcac ccgggatgcg
      421 gttcagaatc agctcgtcgg taagattcgg gcggaggtgg ggagctgaac aagaacggac
      481 gaacacgtgt cgtcgtgacg gggatgggaa cggtgaatcc tctgggcaag aacctcgagg
      541 agtactggga cgggctcatc gaagggcgga gcaccgcgcg gtttgctgag ggctatccga
      601 ccgagaagct gaccacgaaa ttcgcgtgcg aggtgccgaa cttcgacccg caggatttca
      661 tggatcgcaa agccgcgcag aggatggcgc gcttctccca gatggccgtt gcagcatcaa
      721 cgatggcgct cgcggactca ggactcgacc tcgccaagga ggacgacttt cgcgtcggcg
      781 tcgacatggg caccgggatc ggtggcttca tcgagatgac ccagggggcc atctcgtacg
      841 cgaccaaagg ccggctgaat cctctgtacg cgccaatgat catcccgaac atggccgccg
      901 cctctgtggc gatggcgttt catctgcgcg gaccgaacac gacagtgacc accgcatgcg
      961 cggcctccac tcatacgctc ggcgatgcgt cgcgaatcat ccagcatggc gacgcggacg
     1021 tgatgctcgc gggcggctcg gaggcgtctt tgtgcgaggt cggaatctca tcgttcaa
//
LOCUS       DATLMA010000518         1119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_653427, whole genome shotgun sequence.
ACCESSION   DATLMA010000518 DATLMA010000000
VERSION     DATLMA010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653427"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VNA10_06625"
     CDS             <1..219
                     /locus_tag="VNA10_06625"
                     /inference="COORDINATES: protein motif:HMM:NF020742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HVG37390.1"
                     /translation="LQDNTSTITKLEDARDGFNRMGWCGKESCGKAITDRTGMSVLGT
                     PFYPEPFEGKCIVCGEKTKQLVYAAKAY"
     gene            complement(229..675)
                     /locus_tag="VNA10_06630"
     CDS             complement(229..675)
                     /locus_tag="VNA10_06630"
                     /inference="COORDINATES: protein motif:HMM:NF019407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archaellin/type IV pilin N-terminal
                     domain-containing protein"
                     /protein_id="HVG37391.1"
                     /translation="MRPLLRYDPDAVSAVIATILLVAITVVLAAVLYIMVSGLISPTS
                     NGPQLMGVVVSKTTDGKNWTLQIVSTPPGLIPSTVHLQIVAPNGTSIVYKTFSALNWV
                     VDGASYMGNGMSIRAGDQLFVDVARFPLNYQVMISASTILYNGFLR"
     gene            complement(771..971)
                     /locus_tag="VNA10_06635"
     CDS             complement(771..971)
                     /locus_tag="VNA10_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008604419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37392.1"
                     /translation="MAEVAFPRSAAFWFYALAFLAGILFYLIWGFTYGSWNILRPEWV
                     GAYAVTIILVGFGIVGMLLYRK"
BASE COUNT          252 a          344 c          348 g          175 t
ORIGIN      
        1 ctccaagaca acacctccac gatcacgaag ttggaggacg cccgcgacgg gttcaaccgg
       61 atgggctggt gcggcaagga atcgtgcggg aaggcgatca cagatcgcac cgggatgagc
      121 gtcctcggga cgccgttcta cccggagccg ttcgagggca agtgtatcgt ctgcggcgag
      181 aagacgaaac agctcgtgta cgccgcgaag gcctactgaa cgcccggtct accgcaggaa
      241 cccgttgtaa aggatcgtgc tggccgatat catgacttgg tagttgagcg gaaagcgggc
      301 cacgtcgaca aagagctgat cgcccgcgcg aattgacatc ccgttcccca tgtaggacgc
      361 tccatcgacg acccagttga gcgcgctgaa cgtcttgtag acgatcgacg tcccattggg
      421 agcgacgatc tgcaggtgga ccgtggacgg gatcagaccg ggcggcgtcg agacgatctg
      481 gagcgtccag ttctttccgt cggtcgtctt gctgacgacg acccccatga gctggggtcc
      541 gttgctagtc ggcgagatga gcccggagac catgatatac aggaccgccg cgaggaccac
      601 ggtgatggcg acgagcaaga tcgtcgcgat gacggcggag accgcgtcgg ggtcatatcg
      661 gagtagcgga cgcatctcga gcctcgagga agcggccgat tcggcaagcg attcttaagc
      721 cctctctcgc gcgtatcaaa cggggaactc tagcgccgcc ctgcgccctc ctattttcga
      781 tagaggagca tcccgacgat tccaaacccg acgaggatga tcgtcaccgc gtacgcgccg
      841 acccactccg gcctcaggat gttccaggaa ccgtacgtga aaccccagat caggtagaac
      901 aggatccccg cgaggaaggc gagcgcatag aaccagaacg ccgccgaccg cgggaaggcg
      961 acttccgcca ttgccacgcg caaggagacc cccgtaaaaa acctttacca ctcctgaggc
     1021 ccgcgagcaa cgtacccgcg atcgtttcgg cggtagaggc ctcgcacatc atgcgagtcg
     1081 cgcggaggca gagaccgacc acaccgcacc aaaaaatcg
//
LOCUS       DATLMA010000519         2783 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_48337, whole genome shotgun sequence.
ACCESSION   DATLMA010000519 DATLMA010000000
VERSION     DATLMA010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48337"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..255)
                     /locus_tag="VNA10_06640"
     CDS             complement(4..255)
                     /locus_tag="VNA10_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase SEC61 complex subunit gamma"
                     /protein_id="HVG37393.1"
                     /translation="MADIVDRSWEVQRRIEERAKRLGKGRYGRVLKMARRPTSDEYSK
                     VVLITGLGIAAIGALGFVIYLIMRYGPGVFHGIFGYLGL"
     gene            complement(260..1366)
                     /gene="ftsZ"
                     /locus_tag="VNA10_06645"
     CDS             complement(260..1366)
                     /gene="ftsZ"
                     /locus_tag="VNA10_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HVG37394.1"
                     /translation="MDSIVREVVSRSGVQPRLPESPTQTMGVGAEDAELERILASLRT
                     NIKIVGIGGGGCNTIDRLVESGIVGAELFAANTDAQHLLIIRSPHKLLLGRRVTRGLG
                     AGALPQVGEESAREAADELRSVVQGADMVFITCGLGGGTGTGGAPILAQLSKEAGALT
                     IAICTFPFRAEGAIRAENAEYGLEKLRNFADTVVVIPNDKLLELVPRLALNAAFKVAD
                     DVLMRAIKGITEIITKPGLVNLDFNDIKTIMKGGGVAMIGLGESDRDNRSEEAIEEAI
                     NSPLIDVDISAATGALVNVTGGNDMSVAEAEKVAEIVQGRIASNARIIWGAAVDPSLE
                     HKLRVMLILTGVRSKQILGPGEHVRAHGGVDIVR"
     gene            complement(1494..2588)
                     /gene="ftsZ"
                     /locus_tag="VNA10_06650"
     CDS             complement(1494..2588)
                     /gene="ftsZ"
                     /locus_tag="VNA10_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HVG37395.1"
                     /translation="MNSMLEDVLAREGSAPAFEDSRVDAELEEMLSKMRTNIKIIGLG
                     GGGCNTIGRVYNEGIVGAELYACNTDAQHLLHIASPKKVLLGRRITKGLGAGALPQIG
                     EEAAREAEEELRAIVQGADIVFVTCGLGGGTGTGSCGYVARLAKEMGALTIAVVTLPF
                     RGEGKLRMESAEWGLERLRDAADTVITIPNDKLLDLVPRQSLNLAFKFADEVLMRSIK
                     GLTEIITKPGLVNLDFNDVKTIMKGGGVAMIGLGESQAVGDNRAVEAIEEAINSPLLE
                     VDVSTAHGVLINVTGGNDMTISEAERVAEVVQSKVSPTARIIWGATVDASLEHTLRVM
                     LVATGVKSKQIVGRRDPSEEKARVGVDVIR"
BASE COUNT          450 a          974 c          844 g          515 t
ORIGIN      
        1 ccatcacagc cccaggtaac cgaaaatccc gtggaacacg cccggtccgt atcgcatgat
       61 caggtagatg acgaagccca gcgcaccgat cgcggcgatc ccgaggcccg tgatcaacac
      121 gaccttggag tactcgtccg acgtgggccg gcgcgccatc ttcaggacac ggccgtagcg
      181 gcccttcccg aggcgcttcg cacgctcctc gatccgccgt tgaacctccc agctccggtc
      241 cacgatgtcc gccatggcct caccgcacga tgtcgacccc gccgtgggcg cgcacgtgct
      301 cccccgggcc caggatctgc ttcgatctca cgccggtcag gatgagcatg acccgcagct
      361 tgtgctccaa gctcggatcg accgccgcgc cccagatgat acgcgcgttc gacgcaatgc
      421 gaccctggac gatctcggcg accttctcgg cctcggctac gctcatgtcg ttcccgccgg
      481 tgacgttcac gagggctccg gtcgcggcgc tgatgtcgac gtcgatcagg ggcgaattga
      541 tcgcctcttc gatcgcctcc tccgagcggt tgtcccgatc ggactcgccc aggccgatca
      601 tcgccacccc gccgcccttc atgatcgtct tgatgtcgtt gaagtcgagg ttgacgaggc
      661 cgggcttcgt gatgatttcc gtgatccctt tgatcgcgcg catcagcaca tcgtcggcga
      721 ccttgaacgc cgcattcagc gccagacgcg ggacgagttc aaggagtttg tcattcggga
      781 tcacgacgac cgtgtccgcg aagttccgga gcttctcgag accgtactcg gcgttctcgg
      841 ctcggatcgc accctcggcc cggaacggga acgtgcagat cgcgatcgtg agggcgcccg
      901 cctccttcga cagctgggcg aggatcgggg cgccgcccgt cccggtcccg ccaccgaggc
      961 cgcacgtgat gaagaccatg tccgccccct ggacgaccga ccggagttcg tccgccgcct
     1021 cgcgggcgga ctcctcgccg acctggggga gcgctccggc cccgaggccg cgcgtgaccc
     1081 ggcgtccgag gaggagcttg tggggcgacc ggatgatgag gagatgctgg gcgtccgtgt
     1141 tcgcggcgaa gagctccgcc ccgacgatcc cggactcgac gagccggtcg atcgtgttgc
     1201 agccgccccc tccaatgccg acgatcttga tgttcgtcct caggctcgcg aggatccgtt
     1261 cgagttcggc gtcctccgcg ccgacgccca tcgtctgcgt gggggattca ggaagccgcg
     1321 gctgaacgcc cgagcgactc acgacttccc tgacaatgga atccattttt cagcctccgg
     1381 ctgcccgagg aagcgaatga agcaaccgcg acattcacgt aaaggaggag gattaataaa
     1441 tgtttccggg agcgacacct ctccgcctcc cgtggattcg ccacggcggc aattcagcgg
     1501 atgacgtcga cgccgacgcg ggccttctcc tccgatggat ctcggcgtcc gacgatctgt
     1561 ttcgacttga cgcccgtcgc gacgagcatg acgcgcaacg tgtgttcgag cgacgcatcg
     1621 acggtcgcgc cccagatgat ccgcgcggtc ggggagacct tcgattggac gacctcggcg
     1681 acgcgctccg cctcggaaat cgtcatgtcg ttcccgcccg tgacgttgat cagcacgccg
     1741 tgggcggtcg acacatcgac ctcgaggagc ggcgagttga tcgcctcttc gatcgcctcg
     1801 acggcacggt tgtcgccgac ggcctggctc tcgccgagac cgatcatcgc gacgccgccg
     1861 cctttcatga tcgtcttcac gtcgttgaag tcgaggttca cgaggccggg cttcgtgatg
     1921 atctccgtga gtcccttgat cgaccgcatg aggacctcgt ccgcgaactt gaacgcaagg
     1981 ttcagcgact gacgcggcac caggtcgagc aatttgtcat tcgggattgt gatcaccgtg
     2041 tcagccgcgt cgcggagccg ctcgagcccc cattccgcgc tctccatccg gagcttccct
     2101 tcgccccgga acggcagggt cacgaccgcg atcgtcaggg cgcccatctc cttcgcgagc
     2161 cgggcgacgt agccgcagct gccggtgccc gtcccgccac ccaggccgca cgtcacgaac
     2221 acgatgtccg cgccttggac gatcgcgcgc agctcctctt cggcctcccg cgcggcttct
     2281 tcgccgatct gaggcagcgc gccggccccg aggcctttcg tgatccgacg accgagcagg
     2341 accttcttcg gggaggcgat atggagcagg tgctgcgcgt ccgtgttgca tgcgtacagc
     2401 tcggctccga cgatcccctc gttatagacg cggccgatcg tgttgcagcc tccaccaccg
     2461 aggccgatga tcttgatgtt cgtccgcatc ttgctgagca tctcttcgag ctcggcgtcg
     2521 acccggctgt cttcaaatgc gggggcactc ccttcccggg cgagcacatc ctctaacatc
     2581 gaattcattg ccacacctgc agagcctgcg agttcatccc atcccgcaag atggccgcgt
     2641 atccggcgga cgctatttaa aagttgtcgg acgaacgtcc gccgcgttga caaacgcgcg
     2701 cgaatcgtcc tcgatcggca cacgtcactc gaagagcgcg gccttcgatg ccttgcgaac
     2761 ggcgtcgatc gcttcccccg gtg
//
LOCUS       DATLMA010000520         1230 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_715311, whole genome shotgun sequence.
ACCESSION   DATLMA010000520 DATLMA010000000
VERSION     DATLMA010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715311"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VNA10_06655"
     CDS             complement(<1..255)
                     /locus_tag="VNA10_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010978532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HVG37396.1"
                     /translation="MRDEDERKVLEKESKRWEETTLRHALESHPERRKEFVTTSSRPV
                     KRLYTPLDLAGKTDRERLGPPGEFPYTRGIHPTMYRGRLWT"
     gene            complement(307..873)
                     /locus_tag="VNA10_06660"
     CDS             complement(307..873)
                     /locus_tag="VNA10_06660"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG37397.1"
                     /translation="MMRRATMDPESKTFKFKICLVGEESVGKTSLIHRFVSGAFDESY
                     IRTLGAVVSKKTVALGSMQGRPVQVDMMILDIMGKRTFLQLFKEAYFHGAKGVLAVFD
                     VTRAQSLRDLTKWIDGVRDSVGPVPVYALGNKTDLTHRREVNTEDASTVLASYECPVM
                     YTSAKTGENVEQAFQGLAKTIVESTATE"
     gene            complement(924..>1230)
                     /locus_tag="VNA10_06665"
     CDS             complement(924..>1230)
                     /locus_tag="VNA10_06665"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HVG37398.1"
                     /translation="PRMFCEDCFAELTEYVDVPKTGRVAAITLAHMDRTGAQLAHPQV
                     WAFVTFEGIRGGLVHRLLAPQDQARAGMAVRAKLKPRDARTGTIADIEGFEPVRSRF"
BASE COUNT          200 a          409 c          376 g          245 t
ORIGIN      
        1 cgtccacagc cgaccgcggt acatcgtcgg atggattccg cgggtgtatg gaaactcgcc
       61 tggcggcccg agacgctccc ggtccgtctt cccagcgaga tcgagcggcg tgtacaggcg
      121 cttcacgggt cggctcgacg tcgtcacgaa ttccttgcgg cgttcggggt gggactcgag
      181 cgcatgccgc agggtggtct cctcccaccg cttcgattcc ttctcgagga ccttgcgttc
      241 gtcctcgtcc cgcatgagcg cctcgcgtgg tttcaaaggc ccgtgcctat aagatggttg
      301 cgcccttcac tcggtcgccg tcgactcgac aatcgttttc gcgaggcctt ggaaggcctg
      361 ctcgacgttc tcgccggtct tcgccgaggt gtacatcacc gggcactcgt acgacgccag
      421 gacggtcgac gcatcttccg tgttgacctc gcggcgatgc gtgagatccg tcttgttccc
      481 gagggcgtac acggggacgg gaccgaccga atcccgaact ccgtcgatcc acttcgtcag
      541 gtcgcgcagg gattgcgcgc gggtcacgtc gaagaccgcc aggacgcctt tggctccgtg
      601 gaagtacgcc tctttgaaca gctggaggaa cgtccgcttg cccatgatgt ccagaatcat
      661 catatcgacc tggaccgggc ggccctgcat cgaaccgagc gcgaccgtct tcttcgagac
      721 gaccgcaccg agcgtccgga tgtacgactc gtcgaatgcg ccggacacga atcgatggat
      781 gaggctcgtc ttgccgacgc tttcctcgcc cacgaggcag atcttgaact tgaaggtctt
      841 cgactctggg tccatcgtgg cacgacgcat catgctaggg cgcgataccc agccgggggg
      901 ttatcaagcc gtcggcccga ttttcagaat cgggaacgga ccggttcgaa tccctcgatg
      961 tcggcgatcg tccccgtccg cgcatcccgc ggcttgagct tcgctcggac ggccattccc
     1021 gcacgggcct ggtcctgtgg cgcgaggaga cgatggacga gcccgccgcg aatcccctcg
     1081 aacgtcacga acgcccatac ttgcgggtgt gccaattgcg cccccgtccg gtccatgtgt
     1141 gccaatgtaa tcgccgcgac ccgccccgtt ttcggcacat cgacgtattc ggtcagctcg
     1201 gcgaagcagt cctcgcagaa catccgcggg
//
LOCUS       DATLMA010000521         1146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_415073, whole genome shotgun sequence.
ACCESSION   DATLMA010000521 DATLMA010000000
VERSION     DATLMA010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415073"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..933)
                     /locus_tag="VNA10_06670"
     CDS             complement(<1..933)
                     /locus_tag="VNA10_06670"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HVG37399.1"
                     /translation="MAARKFPLEKPVTSIGRSSMNDLPISDKMLSRQHARIVKDDDGG
                     LIVEDLGSRNGTFLNGDRLATPQPLKAGDRITLGGVTLKLESESTTRVRIEAGGADAL
                     DNTILKASAELLRAQHQETDPRLPAEQLSKLIESLRVVNELTIELLRDVSVDELMKFL
                     MDKVFETLMPDRGVVLLRSRLTNELIPAVVRVAEGMSADDIRLSKTLVAQVVEKRNGL
                     ILMDTSTGSGVSLADSIRLSGIKSVLAAPLENEGEVVGLIYVDSQVGHRSFEEADLRL
                     LTSLANVAAAKIQNARLMAEAAEKKQMDREFALAR"
BASE COUNT          196 a          363 c          392 g          195 t
ORIGIN      
        1 gcgggcgagc gcgaactcgc ggtccatctg cttcttctcg gcggcctccg ccatcaagcg
       61 cgcgttctgg atcttcgcgg cggccacgtt cgcgagcgag gtcaggaggc gcaggtccgc
      121 ttcctcgaag gagcgatggc cgacctggct gtcgacgtag atgagcccaa cgacctcgcc
      181 ttcgttctcg agcggcgcgg cgaggaccga cttgatcccg gagaggcgga tcgagtccgc
      241 gagcgacacg cccgagccgg tggaggtgtc catcaggatc aggccgtttc tcttctcgac
      301 gacctgagcg acgagggtct tcgacagccg gatgtcgtcg gcggacatcc cctccgcgac
      361 ccggacgacc gccgggatga gctcgttcgt caggcgggag cggaggagaa ccacgccgcg
      421 gtccggcatg agggtttcga acaccttgtc catgaggaac ttcatcagct cgtcgaccga
      481 gacgtcgcgc aggagctcga tcgtgagctc gttgaccacg cggagggact cgatcagctt
      541 cgagagctgt tcggccggaa gacggggatc ggtctcctgg tgctgcgcgc gaaggagctc
      601 ggcggaagcc ttcaggatgg tgttgtcgag cgcgtcggcc ccacccgcct cgatccgcac
      661 ccgggtcgtg gactccgact cgagcttcag ggtcacgccg ccgagcgtga tccggtcgcc
      721 tgccttgagc ggctggggcg tcgcgagccg gtcgccgttc aagaacgtgc cgttgcgcga
      781 acccaggtcc tccacgatca ggccgccgtc gtcgtccttg acgatccgcg cgtgctggcg
      841 cgagagcatc ttgtcggaga tcgggaggtc gttcatcgag gaccggccga tcgacgtgac
      901 cggcttctcg agcggaaact tgcgcgccgc catgccgggc gcacttacgt agacgtagaa
      961 cacgatggtc gaaggattct actcgcgtcg gaaagcgcca gccgtcagcc gggagccggg
     1021 acgagagggc gaccggcaac ccggggccga aaccggaggg cttgcgcgag cgtatttcct
     1081 cacctagaat gtggggttcc atgaaaaaga acattcatcc cgagtaccac gaagtcctcg
     1141 ttcact
//
LOCUS       DATLMA010000522         2172 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_531478, whole genome shotgun sequence.
ACCESSION   DATLMA010000522 DATLMA010000000
VERSION     DATLMA010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_531478"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VNA10_06675"
     CDS             <1..361
                     /locus_tag="VNA10_06675"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HVG37400.1"
                     /translation="DLRGVGALEVNVLQRQTDVSIAKSLREGFGLIVSESLWKSVPVV
                     GGDVTGIRLQIKDGRHGYLVSSVRECADRTIELLRSPAKRKTMGKAGRERVRKHFLIT
                     RYLREYLRIFSDLASAG"
     gene            431..862
                     /locus_tag="VNA10_06680"
     CDS             431..862
                     /locus_tag="VNA10_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007805667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HVG37401.1"
                     /translation="MAARTRRGRVTGIGGIFFKAKDPEALARWYRDHLGISIEAMVAL
                     FTWRSGKDGRRTGYTVWSIFPDDTSYFGKDGASFMINYRVKDLDAVIRELRKEGVTVD
                     PKIEEPEYGRFGWVVDPEGNRIELWEPPKVYRAPEKSIPME"
     gene            complement(928..>2172)
                     /gene="menA"
                     /locus_tag="VNA10_06685"
     CDS             complement(928..>2172)
                     /gene="menA"
                     /locus_tag="VNA10_06685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046428 - 1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase"
                     /protein_id="HVG37402.1"
                     /translation="PFESRTSAITCDLQGVVREYEADAADLFGWTQDEVIGKMSVAMF
                     HVPRNVPTLVPRLLREAVQKGKFEEEVVLMRKDGSTFRAVLTVRPILRDGQHVGYMGM
                     TRPLTPPGPVPVTRLWVQSLRAPFLVASLIPGFVAALAAREAGYGIDLGLLGLSLVGL
                     VFIHLGTNMANDAWDYRSGNDLQVRHLNPFAGGGRVLFRDVLNLRTHLAVAVTFLLLG
                     SLIGLYLVSVVGLPLLWLGLLGVAVAYFYVAPPLRLAHRGVGEIAVGIAFGPVTVLGV
                     YYVLTRAVDPPAVILSLSLGLLVAGILWINEIPDIPADAAVGKRTLVVRLGVARATTA
                     FSAIVLAAYAILVVGVVLFSLTPWALLALLAIPLAIKPILGLRRAGADPHALIPSNAG
                     MILATVVTGILLLAGLAIETFV"
BASE COUNT          429 a          665 c          749 g          329 t
ORIGIN      
        1 cgatctccgt ggagtcggtg cgctcgaggt gaacgtcctt cagagacaga ccgacgtgtc
       61 gatcgcaaaa tcgcttcgcg aaggattcgg tctcatcgtg agtgagtccc tctggaagag
      121 cgtcccggtc gtcgggggcg atgtcaccgg aatccgcctc cagatcaagg acggccgtca
      181 cggctacttg gtgtcgagcg tgagggagtg cgcggaccgc acgatcgagc tccttcggag
      241 tcccgcgaaa cggaagacga tgggaaaggc gggacgggaa cgggtccgca agcacttcct
      301 gattacgcgg tacctgcgcg aatacctgcg gatcttctcc gacctcgcgt ccgcaggttg
      361 agccccgagc gggcgacctc ggcgatccgt gtggggaatc gctttagctt gcgagaccca
      421 ttgacggcgc atggccgcgc gaacgcgtcg gggtcgcgtc acgggaatcg gagggatctt
      481 cttcaaggcg aaggaccccg aggccctcgc cagatggtat cgcgatcacc tcggcatttc
      541 gatcgaggcg atggtcgctt tgttcacgtg gcgaagcggc aaggacggtc ggcgcaccgg
      601 gtacaccgtc tggtcgatct ttccggacga cacctcgtac ttcggaaaag atggcgcttc
      661 gttcatgatc aattatcggg tgaaggactt ggatgccgtg atccgggagc tccggaagga
      721 aggcgtcacg gtcgacccga aaatcgaaga gcccgagtac ggccgcttcg gctgggtcgt
      781 cgacccggaa ggcaaccgaa tcgaactctg ggagccaccg aaggtctacc gcgctcccga
      841 gaaatcgatt ccgatggaat gagagcgagc ggtcttgcgg caggtggcgt ccgtcgcgga
      901 ccccaccgcc ggtacgggcc gcattcctta gacgaacgtt tcgatggcca atcccgcgag
      961 cagcagaatt ccggtcacga ccgtcgcgag gatcatcccc gcgttggagg gaatcaaggc
     1021 gtgcggatcg gctccggccc gccggaggcc aaggatcggt ttgatggcga gcggaatcgc
     1081 caggagggcg aggagggccc acggggtcag ggagaacagg acgacgccca cgacgagaat
     1141 cgcataggcc gcgaggacga tcgcactgaa cgccgtcgtc gcccgcgcaa caccgagacg
     1201 caccacgagc gtccgcttcc cgaccgcggc atccgccggg atgtccggga tctcgttgat
     1261 ccagaggatg ccggcgacga ggagaccgag ggagagggag aggatgaccg cgggcggatc
     1321 caccgcgcgg gtgaggacgt agtacactcc gaggaccgtc accgggccga aggcgattcc
     1381 cacggcgatc tcgccgaccc cccggtgggc caatcggagc ggcggtgcca cgtagaagta
     1441 ggcaaccgcg acgccgagga gacccagcca gaggagaggg aggccgacaa cagacacgag
     1501 gtacaggccg atgagggatc cgaggaggag gaaggtcaca gcgaccgcca ggtgcgttct
     1561 caaattcagc acgtcacgga acaggacgcg tcctcccccg gcaaacgggt tgagatgtcg
     1621 gacctgcaga tcgttcccgc tccggtagtc ccaggcgtcg ttcgccatgt tcgtcccgag
     1681 atggatgaac acgaggccga ccagggagag gcccagcagc ccgaggtcga ttccgtatcc
     1741 cgcctcccgt gcggcgaggg cggcgacgaa ccccggaatc agggaggcca ccaggaacgg
     1801 tgcccggagc gattggaccc agagccttgt gacggggacg gggcccggcg gcgtcaacgg
     1861 gcgggtcatg cccatgtagc cgacgtgttg cccgtcacga aggatcggtc gcacggtgag
     1921 caccgcgcga aaagtggaac cgtccttccg catgaggacg acctcctcct cgaatttccc
     1981 tttctggacg gcctcccgaa gcaggcgcgg gacgagcgtc gggacgttcc tcggcacgtg
     2041 gaacatcgcg acggacatct tgccgatgac ctcgtcttgc gtccatccga acaggtcggc
     2101 cgcgtcggcc tcgtactctc gcacgacgcc ctgcaggtcg caggtgatgg ccgaggtcct
     2161 cgactcgaac gg
//
LOCUS       DATLMA010000523         6785 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_468252, whole genome shotgun sequence.
ACCESSION   DATLMA010000523 DATLMA010000000
VERSION     DATLMA010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 6785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6785
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468252"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VNA10_06690"
     CDS             <1..697
                     /locus_tag="VNA10_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HVG37403.1"
                     /translation="VSKAIGVSLAKVATKVLLGHSLRSLGLVGEAHIKHVAVKAPVFP
                     FQRLPGVDTILGPEMKSTGEVMGIDRSLGRAYYKAMLAAGNPLPTQGAVYVTVRDEDK
                     PGILPVVQRLARIGLRIFATRGTAQFLRENGVDATTVYRISENEFPDALGLMRRGEIR
                     LVINTPTNSTGARRDGYMMRRLAVDLNIPFIATVQAAEAAVQAIEEFSTGDLAVVPLQ
                     EYRRISANQAAKL"
     gene            722..1129
                     /locus_tag="VNA10_06695"
     CDS             722..1129
                     /locus_tag="VNA10_06695"
                     /inference="COORDINATES: protein motif:HMM:NF014100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF131 domain-containing protein"
                     /protein_id="HVG37404.1"
                     /translation="MRLIRWVGPASFVAGVLMMALAVAQHQANVYLVLVIPVIVGTGP
                     LAFLGIILVFAGFLLTFLLWPARFVEDPGNRDAAPTSPAGAAPARRWGGVLFLGPIPV
                     IFGSDPRMTRTMLLIGVILFLALVALTVIAVFA"
     gene            1167..2111
                     /locus_tag="VNA10_06700"
     CDS             1167..2111
                     /locus_tag="VNA10_06700"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HVG37405.1"
                     /translation="MKILITDGLESEAISTLRKLHEVDVQELDSKGLLGAIPEYHALI
                     VRSRTTVSKPVLTRATNLKVVGRAGVGVDNIDVAEATARKIVVVIAPTASTISVAELA
                     LGHMISLLRHLTEADRSVKDGKWEKKKFEGCELFGKTLGLVGSGRIGAEVAKRAEAFG
                     MRVIAYDPYLSSPTAKALGIQLVDKDVVFREADVVSVHAALTPETKGMIAAAEFAMMK
                     RGAIVVNCARAEIVQEAALVDALRSGRLAGAAADVFQSEPPVGSPLLSAPNAVFTPHL
                     GASTREAQARAGSIIADQVIKVLDGRRPEFLVNPDVYG"
     gene            complement(2102..2314)
                     /locus_tag="VNA10_06705"
     CDS             complement(2102..2314)
                     /locus_tag="VNA10_06705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37406.1"
                     /translation="MTGQISRSEALKEALRARHNEPFEKALGRAIRHLGGQYPEYVAL
                     IAEVREYARAHKLDLRTAARALANQP"
     gene            complement(2319..2891)
                     /locus_tag="VNA10_06710"
     CDS             complement(2319..2891)
                     /locus_tag="VNA10_06710"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010901354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase subunit A"
                     /protein_id="HVG37407.1"
                     /translation="MRVYVVDNGGQWTHREWRVLKYLGAETKIVANDTRVSELDGLDG
                     LVLSGGAPRVGVDPGKMGRNGEYLDAFDAPILGICAGHQFMAKHLGGDAAPAKVPEFG
                     KSVVEIHQPDVLFEGLPNRFEVWESHNDEVTQLPKDFVALASSENCDIQAMRHRGRPL
                     FGLQFHPEVEHTQFGADIFRNFLRLCETSK"
     gene            complement(2943..3890)
                     /gene="guaA"
                     /locus_tag="VNA10_06715"
     CDS             complement(2943..3890)
                     /gene="guaA"
                     /locus_tag="VNA10_06715"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HVG37408.1"
                     /translation="MKFDANAFIAEQVEAIRRAAPTKAIIACSGGVDSTTAAVLASRT
                     LGDRLLAVYIDTGLMRKGETEDVAQTLKELNVRHRIVQAADEFFSALNGIVDPEKKRT
                     VIGRTFIEFFEREAQSFGADHLVQGTIAPDWIESGGQLRDRIKTHHNVGGLPENMKLK
                     LVEPLRDLYKDEVRAVARALGVRVSERQPFPGPGLAVRVVGEVTPERVALVRGASAVV
                     EEEIQAAAGRGLMPLPWQYFAVLLPVQTVGVHGDLRVYGHTIAVRAVDSIDGMTAGYS
                     KIPHEVLDRISIRITNEVAGINRVVYDVSNKPPSTIEWE"
     gene            complement(3887..4357)
                     /gene="purE"
                     /locus_tag="VNA10_06720"
     CDS             complement(3887..4357)
                     /gene="purE"
                     /locus_tag="VNA10_06720"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HVG37409.1"
                     /translation="MPVDVLIVLGSKSDAEVGKQASSFLDQFGVGYEMVVASAHRTPD
                     LLRDLIRNTTAKVIIAIAGLSAALPGTIAAHTTKPVIGVPVSGKLNLDAVLSVSQMPP
                     GVPVAAVGLDRGENAAILAVEILAIRDERLVEKLKEHREALKKWVLEDSRTLGE"
     gene            complement(4424..4732)
                     /locus_tag="VNA10_06725"
     CDS             complement(4424..4732)
                     /locus_tag="VNA10_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37410.1"
                     /translation="MSGFSAFDWLTFLTILLLTFSLFLVITGAFTAYFGSGKSRKIGV
                     GLLVGGLVVGVLWAWYAGPFSSNVNLVNIIVESIGVILAAVIGAAAAIGLFLLAIMKS
                     "
     gene            complement(4741..4974)
                     /locus_tag="VNA10_06730"
     CDS             complement(4741..4974)
                     /locus_tag="VNA10_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HVG37411.1"
                     /translation="MAIGFVLISTAPAKEHEVYNELLKVKEIVELHPLFGEYDLIAKI
                     EAEDFNVLGQVVVDKIRSIPGVIDTKTLTGIKF"
     gene            complement(5111..6034)
                     /locus_tag="VNA10_06735"
     CDS             complement(5111..6034)
                     /locus_tag="VNA10_06735"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HVG37412.1"
                     /translation="MGVKNFLGAFGHVAMDYIVSLRRLPTPNTSIEILDRQRYFGGTA
                     GNLARAAARLGVKVSLASFVGADFPPDYRQALARDGVDTDDLRTIPRANTPTAWVFSD
                     PKGNQMAVVDQGPMKDAGRLPLLRHSVQDVDLVHLGTGRPEYYLRIAKLASALRRTIA
                     FDPSQEIHYVYTPRLFRELLRRSTYFFGNEAEIVRARRLARVTSTEGLLQATEVVVAT
                     LGARGSVIYSHDGRIRVPRVRPRKVVDVTGAGDAYRAGFYAGLSRGLDLRRCGILASA
                     VASFVVEKKGTQSNLPTWSQVLGRARRHATF"
     gene            complement(6025..6669)
                     /locus_tag="VNA10_06740"
     CDS             complement(6025..6669)
                     /locus_tag="VNA10_06740"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MtnX-like HAD-IB family phosphatase"
                     /protein_id="HVG37413.1"
                     /translation="MPEKRAVLSDFDGTITRTDVAEAILDRFAPPEWREIEEVYRARK
                     IGTRESMVRQFALVRARKEELLRFVDREAVIDETFREFAEFCKRRGFVLEIVSEGLDF
                     YVRHLLRKWDVHVPVRTNHVVFEDDRLRIEYPWADATCTLCGTCKLLRVFELRAEGYR
                     TAYVGNGHSDLCPAIEADLVFAKAELADLCRVEEIDFIQFDRFSEVQRELGGWA"
BASE COUNT         1224 a         2211 c         2093 g         1257 t
ORIGIN      
        1 tgtctcgaag gcgattggcg tctccctcgc caaggtcgcg acgaaggtcc tgctcggcca
       61 ttcgctccgc tcgttgggcc tcgtgggcga agcacacatc aaacacgtcg cggtgaaggc
      121 tcccgtattc ccgttccagc gcctccccgg cgtggacacg attctcggtc cggagatgaa
      181 gagcacggga gaggtcatgg ggatcgaccg gtcgctcggc cgcgcctact acaaggcgat
      241 gctcgccgca gggaatccgc tcccgaccca gggggccgtc tacgtgaccg tccgtgacga
      301 ggacaagccc ggcatcctcc ccgtggtcca gcggctggcc cgcatcggcc tgcggatctt
      361 tgcgacgcgc ggcacggcgc agttcctccg cgagaacggc gtggacgcga ccaccgtgta
      421 ccggatcagc gagaacgaat tcccagacgc cctcgggctc atgcggcgcg gggagattcg
      481 tctggtcatc aacacgccga cgaactcgac cggggcgagg cgagacggat acatgatgcg
      541 ccgcctcgcg gtcgatctga acatcccgtt cattgcgacg gtccaagccg cggaggccgc
      601 ggtgcaagcg atcgaagagt tctcgacggg ggacctcgca gtcgtcccgc tccaggagta
      661 ccggcgcatc tccgcgaacc aggcggcaaa gctttagcaa gaccagagga tggtctcgtg
      721 cgtgcgcctg atccgttggg tcggacctgc ctcgttcgtc gccggcgtct tgatgatggc
      781 tctcgccgtg gcacagcacc aggccaacgt ctacttggtc ctcgtcatcc cggtcatcgt
      841 cggaaccggc ccactcgcct tcttgggaat catcttggtc ttcgccggtt tcctgctgac
      901 gttcctgctg tggcccgcac gattcgtcga ggatcccgga aatcgagacg ccgcgccgac
      961 ttcgccggcg ggcgcagcgc cagcccgacg gtggggaggc gtcctgttcc tcgggccgat
     1021 cccagtgatc ttcggatccg acccgcggat gacccgcact atgctcctca ttggcgtaat
     1081 cctcttcctt gcgctcgtcg ccctgaccgt catcgccgtg ttcgcgtgac tcctttttac
     1141 cgaagagcgt ttatcgggcg ccaatcatga aaatcctcat cacggacgga ctcgaatcgg
     1201 aggcgatctc gaccctccga aaactccatg aggtcgacgt gcaagagctc gactcgaaag
     1261 gccttctcgg cgcaattccg gaatatcacg ccctgatcgt ccggagtcga acgacggtct
     1321 ccaagcccgt cctgacccgt gcgacgaacc tgaaggtcgt gggtcgcgcg ggagtcggcg
     1381 tcgacaacat cgatgtcgcg gaagcgaccg cccggaagat cgtcgtcgtg atcgctccga
     1441 ccgccagcac gatcagcgtc gccgaactcg ccctcggcca catgatttcc ctccttcgcc
     1501 acctgacgga ggccgatcgg tcggtcaagg acggcaagtg ggagaagaag aaattcgaag
     1561 gctgcgaatt gttcgggaag accctcggcc tcgtcggctc agggcggatt ggcgcagagg
     1621 tcgcgaagcg cgccgaggcg tttgggatgc gcgtcatcgc atacgacccg tatctttcct
     1681 caccgacggc gaaggcgctc gggattcagc tcgtcgacaa agatgtcgtg ttccgggaag
     1741 ccgatgtcgt gagcgtccac gccgctctga ccccggagac gaagggcatg atcgccgcgg
     1801 ccgagttcgc gatgatgaaa cgaggggcga tcgttgtgaa ctgcgcccgc gcggaaatcg
     1861 tccaggaggc cgctttggtg gatgccttgc gatccgggag gttggctggg gccgcggctg
     1921 atgtgtttca gagcgaacca ccggtcggga gtccgctcct cagcgcaccc aacgcggtct
     1981 tcacccccca cctcggtgct tcgacgcgcg aggcccaggc gagggccggg tcgatcatcg
     2041 cggaccaggt gatcaaagtc ctcgacggcc gccgtcccga gttcctcgtc aacccggatg
     2101 tctacggctg attcgcaaga gccctcgccg ccgtgcgcag gtccagcttg tgggcacggg
     2161 catattcgcg gacctccgcg atgagcgcga cgtattccgg atactggcct cccagatgcc
     2221 ggatcgcgcg gcccagcgct ttctcgaacg gttcgttgtg gcgggcccgg agcgcttctt
     2281 tcagggcttc ggagcgggaa atctggcccg tcaccggctc acttcgaggt ctcgcagagc
     2341 ctcaggaagt ttcggaagat gtcggccccg aactgggtgt gctcgacctc cggatggaat
     2401 tgcagtccga acagaggccg gccgcggtgc cgcatcgctt ggatgtcgca gttctccgag
     2461 ctcgcgagag ccacgaagtc cttggggagc tgcgtgactt cgtcgttgtg ggactcccag
     2521 acctcgaacc gattcgggag cccttcgaac aggacgtcgg gttggtggat ctccacgacc
     2581 gacttgccga actccggcac cttggccggg gccgcgtcgc cccccagatg cttcgccatg
     2641 aactggtgcc cggcgcagat cccgaggatc ggcgcgtcga acgcgtccag gtactcgccg
     2701 ttccgcccca tctttccggg gtccacgccg acgcggggcg cgccacctga cagcacgagc
     2761 ccgtcgaggc catcgagctc cgagactcgc gtgtcgttcg caacgatctt cgtctcggca
     2821 ccgaggtact tcaggacccg ccattcgcgg tgtgtccact gacctccgtt gtcgacgacg
     2881 tagacgcgca tgggactccc gtagcggccg gatgagaaaa agatttcccc gcgggattcc
     2941 ggctactccc actcgatggt cgacgggggc ttgttcgaga cgtcgtacac gacgcggttg
     3001 atccccgcga cctcgtttgt gatgcgaatc gagatgcggt cgaggacctc gtgggggatc
     3061 ttcgagtacc ccgcggtcat cccatcgatc gagtcgaccg cgcggaccgc gatcgtgtgg
     3121 ccgtacaccc ggaggtcccc gtggacgccg accgtctgca ccggcaggag gacggcgaag
     3181 tattgccagg gtagcggcat gagcccgcgc cccgccgcgg cctggatctc ttcctcgacg
     3241 acggcggacg cgcctcgcac gagcgcgacg cgttccggcg tcacctctcc gaccacgcgc
     3301 accgcgagtc ccggtccggg aaagggctgc cgctcggaga ccctcacccc gagggctcgg
     3361 gcgaccgccc gaacttcgtc cttgtagagg tcgcggagcg gttcgacgag cttcaacttc
     3421 atgttctccg ggaggccgcc gacgttgtgg tgggtcttga tccgatcccg gagctgcccc
     3481 ccgctctcga tccagtccgg ggcgatcgtc ccctgaacga ggtggtcagc cccaaagctc
     3541 tgcgcctccc gttcgaagaa ttcgatgaac gtgcgtccaa tgaccgtccg tttcttctcc
     3601 ggatcgacga tgccattgag ggcggagaag aattcgtcgg cggcttggac gatccggtgg
     3661 cgcacgttga gttccttgag ggtctgggcg acatcctcgg tctctccctt tctcatgagg
     3721 cccgtgtcga tgtagaccgc gaggagccga tctccgagcg tgcgactcgc gaggaccgcc
     3781 gcagttgtgc tgtcgacccc gcccgagcag gcgatgatcg ccttggtcgg tgcggcccgg
     3841 cgaattgctt cgacctgctc ggcgatgaaa gcattcgcgt cgaacttcat tcacccagcg
     3901 tccgagagtc ttcgaggacc cactttttca acgcttctcg gtgctccttg agcttctcga
     3961 cgaggcgctc gtcccggatg gccaggattt cgacggcgag gatggctgcg ttctcccctc
     4021 ggtcgaggcc gacggccgcc acgggcacgc cgggcggcat ttgcgagacg ctgaggacgg
     4081 cgtccaagtt caatttcccg ctcaccggca cgccgatcac cggcttcgtc gtgtgcgccg
     4141 cgatggtgcc aggaagcgcg gcggagaggc cagcgatcgc gatgatcacc ttcgcggtcg
     4201 tgttccggat caaatcccga aggaggtctg gcgtccgatg ggcggaggcg acgaccatct
     4261 cgtatccaac gccgaactgg tccaagaacg aactcgcctg ttttccgacc tccgcatcgc
     4321 tcttcgaacc gaggacgatg aggacgtcaa cgggcatcgg ctgggacaag gtgggttcct
     4381 ggaataaagg ctttccactt cgccgatgga accggcgacc ggcctagctc ttcatgatgg
     4441 ccaagaggaa gagcccgatc gccgcggcgg ctccgatgac cgccgcgagg atcacgccaa
     4501 tcgactcgac gatgatgttg accaggttca cgttcgagct gaacggaccg gcgtaccacg
     4561 cccacagcac cccgacgacc aaaccaccca caagcagtcc gaccccgatc ttccggctct
     4621 tcccgcttcc gaagtacgcc gtgaaggcac cggtgatgac caagaagaga ctgaaggtca
     4681 ggaggaggat ggtcaggaac gtcaaccagt caaacgcgga aaagccgctc atgtgatccc
     4741 tcagaatttg atgccggtca aggtcttcgt gtcgatgact cccggaatgg atcggatctt
     4801 gtcgacgacg acctgaccga ggacgttgaa atcctcggcc tcgattttcg cgatcaggtc
     4861 gtactcaccg aacaaggggt ggagctccac gatttccttc actttgagga gctcgttgta
     4921 cacttcgtgc tccttggcag gagcggtgct aatgagcacg aacccgatgg ccatccctag
     4981 gtcaccgcgc ggagaaacta ctgtcggaat ataaccctat cgcaacttgt acttcaaacg
     5041 ctcgtcccat gcgatccatc gcatctcttc atggcccgtc ggccagggga cgtcgtgatt
     5101 cgcgaccgcc tcagaaggtc gcgtgtcgcc gagcccggcc gagcacctgg gaccacgtcg
     5161 gaaggttcga ttgagtccct ttcttttcta cgacgaaact tgcaaccgcc gacgccagaa
     5221 ttccgcagcg acgaagatcg agtccgcggg ataggcccgc gtaaaacccc gcacgatagg
     5281 cgtctccggc cccggtcaca tcgacgactt tgcgggggcg aaccctggga actcggatac
     5341 ggccgtcgtg cgagtagata acgctcccgc gcgcgcccag cgtggccacg acgacctcgg
     5401 tggcttgcag gagtccctcg gtggatgtga cacgagccaa tcgtctcgct cgaacgatct
     5461 ccgcctcgtt cccgaagaag taggtcgatc ggcggagcag ctcgcggaag agtcgagggg
     5521 tgtacacgta atggatttct tgtgacggat cgaatgcgat cgtcctccgc aaggccgacg
     5581 cgagtttcgc gatgcgcaag tagtactccg ggcgtcccgt cccgagatga accagatcga
     5641 cgtcttgcac actgtggcgt agtagaggaa ggcgccccgc gtccttcatg ggcccttggt
     5701 ccaccactgc catctggttc cctttcgggt ccgagaacac ccaagccgtc ggcgtgttcg
     5761 cccgggggat cgtacgaagg tcatccgtgt cgacgccgtc cctcgccaac gcctggcggt
     5821 aatccggagg gaagtcggcc ccgacgaatg acgccagcga gaccttcacg ccgagccgtg
     5881 ccgcggcccg cgcgaggttt ccggcggtcc ccccgaaata ccgctgccga tcgagaatct
     5941 cgatcgatgt attgggcgtg ggcaggcggc ggagggacac aatgtagtcc atcgcgacat
     6001 gaccgaaggc cccgagaaaa ttcttcacgc ccacccacct aattcacgct gaacctcgga
     6061 gaaacggtcg aactggatga aatcgatttc ttccacgcgg cacagatccg cgagctcggc
     6121 cttcgcgaag acgagatctg cctcgatcgc agggcagaga tccgaatgcc cgtttccgac
     6181 gtaagccgtt cggtagcctt cggctcgaag ttcgaacacg cgcaacaact tgcaggtccc
     6241 gcacaacgtg cacgttgcgt cggcccacgg gtactcaatc cgcaggcggt cgtcttcgaa
     6301 aaccacgtgg ttcgtgcgga ccggtacgtg aacgtcccac ttccggagca gatgtcgaac
     6361 atagaagtca agaccttcgc tcacaatctc gaggacgaac cctcgtcgtt tgcagaactc
     6421 ggcgaactcg cggaacgtct cgtcgatcac ggcttcgcgg tcgacgaatc gcaacaactc
     6481 ctctttgcgc gcgcgaacca acgcgaattg acggaccatc gattctcgcg ttccgatctt
     6541 ccgcgcccgg tagacctcct cgatttcccg ccactcggga ggtgcgaacc gatcgaggat
     6601 cgcctcggcc acgtcggtcc gcgtgatcgt tccatcgaaa tcggatagga cggccctctt
     6661 ctccggcacg tgatcacaaa tcctcgggcg agccgagtgt tcacgtccct tcttgccagg
     6721 actcgaggta ggcacgctga gctttcgtca agtgatcaat ccgaaccctc atgctgcgca
     6781 gcttc
//
LOCUS       DATLMA010000524         2041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_891760, whole genome shotgun sequence.
ACCESSION   DATLMA010000524 DATLMA010000000
VERSION     DATLMA010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891760"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VNA10_06745"
     CDS             complement(<1..313)
                     /locus_tag="VNA10_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37414.1"
                     /translation="MMFRESFAAEVPVSLEPLQTTDAHAYWRTFVSGRTDLPTGDLTV
                     HLDRYLALPPEEQRSHFSVKKDGRIIGTVRLGPAEISGFSMDPTHRDEVAGALLKSMD
                     RL"
     gene            363..1499
                     /locus_tag="VNA10_06750"
     CDS             363..1499
                     /locus_tag="VNA10_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012633453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HVG37415.1"
                     /translation="MDFGLTEIQEITRKTVRDFAEQEVIPQSRDFDESQEFPHAWAKK
                     MGELGLFGVFVPEKYGGAGLDTVCYAITIEELSRGDASAGVIAAVCNGLVCEPLLHYG
                     TEEQKRKFLEPVARGDWMGAYALTEPGSGSDAAAMRTTATLERDEWVLRGTKTFATNG
                     SVAKIVVVYARTGTKKHEISAFVVPSDAKGFAVLKKEDKMGIRASDTVTLGFDGCRIP
                     KENLLGDLHKGFTIAMATLDGGRIGIAAQALGIGQRALEESTKYAKERQAFGQKIADF
                     QAIQWKLADMATEIDAARLLTYRAAHLEDLGQRHTYESSVAKLFASEAAHRAVDAAVQ
                     IHGGYGFIKDYVVEKLYRDQRVTEIYEGTSEVQRLVIARSILGG"
     gene            1573..>2041
                     /locus_tag="VNA10_06755"
     CDS             1573..>2041
                     /locus_tag="VNA10_06755"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HVG37416.1"
                     /translation="MMATRVLYMEERRGQDPDPCYAREFDARIVERGPDYVVLDQTLF
                     YAEGGGQPDDTGSLRWTDGEARVLRVTKEKGVVKHHVDRMPIADSVHGAIDWDRRYKH
                     MRMHTSQHLMSGLVFRRYAARTVSNQIHMDYSRVDFQPANFTTDDLKRIEDECN"
BASE COUNT          420 a          610 c          668 g          343 t
ORIGIN      
        1 ggagtcgatc catggacttc aggagcgcac cggcaacctc gtcgcgatgc gtcggatcca
       61 tagagaatcc cgagatctcc gcggggccta accgcacggt cccgatgatg cggccgtctt
      121 tcttgacgga aaagtgcgac cgctgttcct ccggaggaag cgcgaggtac cgatcaaggt
      181 gaaccgtgag gtcacccgtc ggaagatcgg tgcgaccgga gacgaaggtc cgccaatatg
      241 cgtgggcgtc cgtcgtctgc aacggctcga ggctgaccgg cacctctgcg gcgaaggatt
      301 cgcgaaacat caagcttcgg ccgcggagct tttatgcgga aggaggtcct tcgacacgac
      361 gcatggactt cgggctcacg gaaatccagg agattacccg caagacggtc cgcgacttcg
      421 ccgagcaaga ggtcatcccg cagtcacgcg acttcgacga gagccaggag ttcccgcacg
      481 cgtgggccaa gaagatgggc gagctcggac tcttcggggt cttcgtcccg gagaagtacg
      541 ggggcgcggg actcgatacc gtttgctatg cgatcacgat cgaggagctc tctcgcgggg
      601 atgcgagcgc cggcgtcatt gcggccgtgt gcaacggcct cgtctgcgaa ccgctcctgc
      661 attatgggac tgaggagcaa aagcgaaagt ttctcgaacc ggtcgcgcga ggagactgga
      721 tgggcgcata cgcgctcacg gagcccggga gtgggtccga cgcggccgcg atgcgcacca
      781 ccgccacgct cgagcgggac gagtgggtct tgcgcggtac gaagacgttc gcgacgaacg
      841 gatccgtggc caagatcgtc gtcgtctatg ctcggaccgg aacgaagaag cacgagatct
      901 ccgccttcgt cgtcccgagc gacgcgaaag gcttcgctgt cctgaagaag gaggacaaga
      961 tgggaatccg cgcgagcgac acggtcaccc tcgggttcga tggctgtcgg attccgaagg
     1021 agaacctcct gggagacctt cacaaaggct tcacgatcgc gatggcgacg ctcgacgggg
     1081 gccggattgg catcgcggcc caagcactcg gcatcggcca gcgggccctc gaggagtcca
     1141 cgaagtacgc gaaggaacgg caggcgttcg gacagaaaat cgcggacttc caagcgatcc
     1201 aatggaagct cgcggacatg gcgacggaga ttgacgcagc caggctcctg acctatcgcg
     1261 ccgcgcatct ggaagatctt gggcagcggc acacgtacga atcgagcgtc gcgaagctct
     1321 tcgcgtcgga ggctgcccac cgagctgtcg acgccgccgt ccagattcac ggcggctacg
     1381 gattcatcaa ggattacgtc gtggagaagt tgtaccggga ccaacgcgtc acggaaatct
     1441 atgaagggac ctccgaggtc cagcggctcg tcatcgcgcg ttcgatcctc ggcggctgag
     1501 acccgttcaa gtcccctccg cgacagaaat ccctgcgacg agaatccttt atccccccgt
     1561 ggcttttgcg gcatgatggc cacccgcgtt ctctacatgg aggagcgacg aggacaggat
     1621 ccggacccgt gttacgcgcg ggagttcgat gcgcggatcg tcgaacgcgg tcctgattac
     1681 gtcgtcctcg atcagaccct cttctacgcg gaggggggcg ggcagcccga tgacaccggg
     1741 agcctgcggt ggaccgacgg cgaggctcgg gtccttcggg tcacgaagga gaagggcgtc
     1801 gtcaagcacc acgttgatcg gatgccgatt gcggactccg tacatggcgc cattgactgg
     1861 gatcggcggt acaagcacat gcgcatgcac acctcccagc atctcatgtc cggactcgtc
     1921 ttccggaggt acgctgcgag gaccgttagc aaccagatcc acatggacta tagtcgcgtg
     1981 gactttcaac ccgcgaattt cacgaccgac gatttgaagc gaatcgaaga cgagtgcaac
     2041 g
//
LOCUS       DATLMA010000525         2470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_468459, whole genome shotgun sequence.
ACCESSION   DATLMA010000525 DATLMA010000000
VERSION     DATLMA010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468459"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2470
                     /locus_tag="VNA10_06760"
     CDS             <1..>2470
                     /locus_tag="VNA10_06760"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HVG37417.1"
                     /translation="KPEYVWLMESAVPDVMVRAGVTKYSVVETKKGSDLVGLAYLHPL
                     RAKLPYQKSVKGEWVHKVVPSDTVVAEYTGLVHSAPGHGPEDFELGQRLGLPAFSPVD
                     AGGHFTAEAGVYAGQKVREANPGIIADLRAAHALFAEETILHAYGHCWRCKTPILFRA
                     TVQWFLKVTDFRPKMVEEVGRVTWFPDWAGSARQLDWTSNLRDWCISRQRYWGIPLPI
                     WRCAKCHHWTVVGSAESLRNANGYQEGMDLHRPGIDRVVLPCEKCDGEKRRVPDTVDV
                     WFDSGVSSWASLGYPARDDEFRRWWPQDWIVEGPDQTRGWFNSQLAAGVVAFDRAPYD
                     QVLMHGWVNGPDGRQMHKSLGNYIEPETVVNKFGVDPLRFYVIAVNAPWDDITFQEDG
                     VRNAQRTLNILWNVLRFATTYMVLDRFDPFAAELSSIEGHLRPEDRWLLSRLEGLKKT
                     VGLEMSSYNLHRAARAVEAFILDDLSRWYVKLVRGRTWTETDDGDKMAAFHVLYEALS
                     TLAILLAPVAPHIAEAMYQRLDGRKLSVHMLDWPDVRAKWLRPELERSMSIVQEVVEV
                     VSKERQKGGRKLRWPLKQIAVRSATAEAAEALSSLRSIFLDQVNAKELVVLGPADEFP
                     GTVVVAKPDLAAIGKGYKALAPKIVKLLATRAPGEMQEAFERGSYTLQVDGQTFAIEP
                     TMVRFEKALPADVVRVETPHGEIYLDLRVTPELRAEAYAREIVRRIQQMRKDLDLDVD
                     DFIATVIKTDKEFTATLEGQKSLIARETRSRSMTLTDKAVTSEHVVEWKDVDGHAVTI
                     GVTPLHLSEAVREFTQIPRWTMAKA"
BASE COUNT          470 a          773 c          799 g          428 t
ORIGIN      
        1 agaagcccga gtacgtgtgg ctcatggaga gcgccgtccc cgacgtcatg gtgcgcgccg
       61 gggtgacgaa gtactccgtc gtcgagacga agaaagggag cgaccttgtc ggcctcgcat
      121 atctccatcc gcttcgcgcg aagcttccat atcagaagtc cgtgaagggc gagtgggtcc
      181 acaaggtggt cccctccgac acggtcgttg ccgagtacac agggctcgtc cattcggcac
      241 cggggcacgg cccggaggac ttcgagctcg gtcagcgcct gggccttccc gccttttccc
      301 ccgttgacgc cggaggccac ttcaccgcgg aagccggcgt ctatgcgggc cagaaagtga
      361 gggaagcgaa tcccgggatc atcgcggacc ttcgggcggc tcacgccctg ttcgcggagg
      421 agacgatcct ccatgcgtac ggccattgtt ggcgatgcaa gaccccgatc ttgttccgcg
      481 cgacggtcca atggtttctc aaggtgacgg acttcaggcc gaagatggtc gaggaggtcg
      541 ggcgggtcac atggttcccg gattgggccg gatcggcgcg tcagctcgac tggacgtcca
      601 acctgcggga ctggtgtatc tcgcggcagc gatattgggg catccccctc ccgatctggc
      661 ggtgcgcgaa gtgccatcat tggacggtcg tcggatcagc cgaatcgctt cgaaacgcga
      721 acggctacca ggaaggcatg gaccttcacc ggcccggcat cgaccgggtc gtcctgccgt
      781 gcgagaagtg cgacggcgag aagcggcgcg tccccgacac ggtcgacgtg tggttcgaca
      841 gcggggtctc gagctgggcg agcctcggtt atccggcgcg ggacgacgag ttccgtcgct
      901 ggtggcctca ggactggatc gtcgaggggc cggaccagac gcggggttgg ttcaattccc
      961 aactcgcggc aggcgtcgtc gcgttcgacc gagctccgta cgatcaggtc ttgatgcacg
     1021 gctgggtgaa cggtccggac ggccggcaaa tgcacaagtc cctggggaac tacatcgagc
     1081 ccgagacggt cgtcaacaag ttcggggtcg atccgctccg attctatgtg atcgccgtga
     1141 acgcgccgtg ggacgacatc acgttccagg aggacggcgt ccggaacgcg cagcgcaccc
     1201 tcaacatcct gtggaacgtc ctgcggttcg cgacgaccta catggtcttg gatcggttcg
     1261 atccgttcgc ggcggagctc tcctcgatcg aaggccacct ccggcccgag gatcgttggc
     1321 tcctctcgag gctcgagggt ctgaagaaaa cggtgggcct cgagatgagt tcctacaacc
     1381 tccaccgagc ggctcgcgcg gtcgaggcgt tcatcctcga cgacctctcg cggtggtacg
     1441 tgaagctggt ccgcgggcgc acctggaccg agaccgacga cggggacaag atggcggcgt
     1501 tccacgtgct ctacgaagcg ctgagcaccc ttgcgatcct cctcgctccc gtcgcgcccc
     1561 acatcgccga agcgatgtac cagcgcctcg atggacgaaa gctcagcgtc cacatgctgg
     1621 attggcccga cgtccgggcg aagtggcttc ggcccgagct tgagcggtcc atgtcgatcg
     1681 tgcaagaagt ggtcgaagtc gtctcaaagg aacggcagaa aggaggccgg aaactccgct
     1741 ggccactgaa acagatcgcg gtccgcagcg caacagcgga ggccgcggag gcgctctcct
     1801 cgctccggag tatcttcctg gaccaggtga acgcgaagga actcgtcgta ttgggacccg
     1861 cggacgagtt tccggggacg gtcgtcgtcg cgaaacccga cctcgcagcg attggcaagg
     1921 ggtacaaagc tctcgcaccc aagattgtga aactactcgc cacacgggct ccgggcgaga
     1981 tgcaagaggc gttcgagcgc gggtcgtaca cgctccaggt cgatgggcaa acgttcgcga
     2041 tcgaacctac gatggtgcgc ttcgagaaag cgctccccgc cgacgtggtc cgggtcgaaa
     2101 ctccgcacgg cgagatctac ctcgacctcc gcgtgacccc ggagctccgg gccgaggcgt
     2161 acgctcgtga gatcgtccgt cgcatccagc agatgcggaa agacctcgat ctcgatgtcg
     2221 acgatttcat cgctacagtc attaagacgg acaaagaatt caccgcgacc ctcgaaggac
     2281 agaagtcact cattgcccgc gagacccgtt ctcgtagcat gaccctcacc gacaaagccg
     2341 tcacgtccga acacgtcgtc gaatggaagg atgtcgatgg acatgccgtc acgattggcg
     2401 tcacgccgct ccatctctcc gaagcggttc gcgaattcac gcagattccc cgctggacaa
     2461 tggcgaaagc
//
LOCUS       DATLMA010000526         3398 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_110084, whole genome shotgun sequence.
ACCESSION   DATLMA010000526 DATLMA010000000
VERSION     DATLMA010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110084"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1018)
                     /locus_tag="VNA10_06765"
     CDS             complement(<1..1018)
                     /locus_tag="VNA10_06765"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010900820.1"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit A'"
                     /protein_id="HVG37418.1"
                     /translation="MRGVTKRIQAIKFALLSPDEIRRMSATKIITADTYDDDGFPIDM
                     GLMDSHLGVIEPGLRCKTCGGKVDDCPGHFGHIDLAMPVIHVGYVKDIKKLLQATCRK
                     CGRLLLTRQQAQEYMAEMEQVEELGGDVTEVGFVTKETAREAQKRQRCPHCGEEQGKV
                     TLDKPTTFREDGHKLTPKEVRERLERIPNEDLRVLGMNPEVARPEWMVLTALLVPPVT
                     VRPSITLESGDRSEDDLTHKLVDVLRINQRLRENRDAGAPQLIVEDLWELLQYHVTTY
                     FDNQTSGIPPARHRSGRPLKTLVQRLKGKEGRFRSNLSGKRVNFSARTVISPDPILSI
                     NEVGV"
     gene            complement(1027..>3398)
                     /gene="rpoB"
                     /locus_tag="VNA10_06770"
     CDS             complement(1027..>3398)
                     /gene="rpoB"
                     /locus_tag="VNA10_06770"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008086237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit B"
                     /protein_id="HVG37419.1"
                     /translation="KDLKYQLERSYARRRELKISSAIRPDLLTQRLLHALATGNWVGG
                     RAGVSQLLDRTSNMSALSHLRRVTSPLTRSQPHFEARDLHPTQWGRLCPNETPEGQNC
                     GLVKNCALVIDVSEGFPEEEVKLLLADLGTKQVKGQQTQLTRVYVNGDLVGLHEDPKV
                     LVAEIRERRRSGLLSHEVNVRLDENMGEIIINCDEGRIRRPLLVVKDGHIVFSRKHVD
                     ELKMGRLRFSDLVRNGIVEWIDAEEEEDTFIAIYPYDVPSRCKECKHPLSRNDVTWAN
                     MGSRDDEAELLCAHCHKTFTVKAAITKEHTHIEVDPMVILGVASGVVPYPEHNSSPRV
                     TMGAGMAKQSLGLGSSNYRLRPDTRSHLLHYPEQPLVQTDSMKYVSFNERPAGQNFVV
                     AVMSHHGYNMEDAIVMNKASIDRGLGRSSFMRTYRAEERRYPGGQEDHFEIPSPDVRG
                     ARADLSYANLTPDDGLISPEVLVQGGEVLIGKTSPPRFLEEETDFLTPQKRRETSVTV
                     RHGESGWVDSVMLTESENGSKLAKVKVRDLRVPELGDKFASRHGQKGVIGLIAPQEDM
                     PFTAQGIIPDLIINPHAIPSRKTVAHVLEQIGGKVGCLEGRFIDGTPFSGEREEAMRN
                     ALVENGFRSNGKEILYDGRTGRMIPAEIFIGVIYYQKLHHMVSGKLHVRSRGPVQILT
                     RQPTEGRSRQGGLRFGEMERDCLIGHGAAMVIKDRLLDESDGTIQYVCGNPDCGHFAI
                     KDRKGNLRCPVCENTSKIYPVQTSYAFKLLLDELLSLGVVMRLQLEDMR"
BASE COUNT          523 a         1108 c         1106 g          661 t
ORIGIN      
        1 ggacgccgac ctcgttgatc gacaggatcg gatccggaga gatcacggtg cgggccgaga
       61 agttcacccg cttgccggac aggttcgaac ggaagcggcc ttcctttcct ttcaaccgct
      121 gcacgagcgt cttcagcggg cgcccggagc ggtgcctcgc cggcggaatg cccgacgtct
      181 gattgtcgaa gtacgtcgtc acgtgatatt ggaggagctc ccacaggtcc tcgacgatca
      241 gctggggcgc acccgcgtcc cggttctcgc gcaggcgctg gttgatccgc aggacgtcca
      301 cgagcttgtg cgtgaggtcg tcctccgagc ggtcgccgct ctcgagggtg atcgacggac
      361 gcacggtgac gggcgggacg agcaacgcgg tcaggaccat ccactcgggc cgggcgacct
      421 ccgggttcat cccgaggacg cggaggtctt cgttcgggat ccgctccagg cgctcgcgca
      481 cctctttcgg cgtgagcttg tgaccgtcct cgcggaaggt cgtcggcttg tcgagggtga
      541 ccttcccctg ttcctcgcca cagtggggac agcgctgccg cttctgggcc tcccgtgcgg
      601 tctccttcgt gacgaacccg acctccgtca cgtcgccgcc gagctcctcg acctgttcca
      661 tctccgccat gtattcttgc gcttgctgtc gcgtgaggag gaggcggccg cacttacggc
      721 acgtcgcctg gaggagcttc ttgatgtcct tcacataccc gacgtggatc accggcatcg
      781 cgagatcgat gtggccgaag tgacccgggc aatcgtcgac cttcccgccg cacgtcttgc
      841 atcggagacc gggctcgatg acccccagat gggaatccat caggcccatg tcgatcggga
      901 agccgtcgtc gtcgtaggtg tccgccgtga taatcttcgt cgccgacatc cggcggatct
      961 catcggggct caggagagcg aacttgatcg cctggattcg cttggtgacc cccctcattg
     1021 aagacatcat cgcatgtcct ccagctggag acgcatgacg acccccaagg acaggagttc
     1081 gtcgagcagg agcttgaacg catacgacgt ctggacggga tagatcttcg aggtgttctc
     1141 gcacaccgga catcggaggt tgcctttccg atccttgatc gcgaagtgac cgcagtccgg
     1201 gttgccgcac acatattgga tcgtcccgtc cgattcgtcg aggaggcggt ccttgatcac
     1261 catggcggcg ccgtggccga tcaggcaatc ccgttccatc tcgccgaacc gcaggccacc
     1321 ctggcgggac cgtccttccg tcggctgccg cgtgaggatc tgcaccggcc cacgggaccg
     1381 gacatggagt ttgccggaga ccatgtggtg gagcttctgg tagtagatga cgccgatgaa
     1441 aatctccgcg gggatcatgc ggcccgtgcg gccgtcatac aggatctcct tgccgttcga
     1501 ccggaatccg ttctccacga gggcatttcg catcgcctct tcccgctcgc cggagaacgg
     1561 cgtgccgtcg atgaaccggc cttcgaggca gccgaccttt ccgccgatct gctcgaggac
     1621 gtgggccacg gtcttccggg acgggatcgc gtggggattg atgatgaggt ccgggatgat
     1681 gccttgcgcg gtgaagggca tgtcttcctg cggcgcgatg agcccgatga cgcccttctg
     1741 cccgtggcgg gacgcgaact tgtcgcccag ctccgggacc cggaggtcgc gcaccttcac
     1801 cttcgcgagc ttcgagccgt tctcgctctc cgtgagcatg acggagtcga cccagccgct
     1861 ctccccgtgc cgaaccgtga cggacgtctc gcggcgcttc tgcggagtca ggaagtccgt
     1921 ctcctcctcg aggaaccgcg gcggactcgt cttcccgatc aggacttcgc cgccctggac
     1981 gaggacctcc ggcgagatga ggccgtcatc cggcgtgagg ttcgcgtacg agaggtccgc
     2041 gcgggcccct cggacatccg gggacgggat ctcgaagtgg tcttcctgac cgcccgggta
     2101 gcggcgctcc tccgcgcggt acgttcgcat gaacgacgag cgcccgaggc cgcggtcgat
     2161 cgaggccttg ttcatgacga tcgcgtcttc catgttgtat ccatggtggg acatgaccgc
     2221 gacgacgaag ttctggcccg cgggccgctc gttgaaggac acgtacttca tcgagtccgt
     2281 ctgcacgagc ggctgctccg ggtagtggag caggtggctc cgggtatccg gccgcagacg
     2341 gtagttgctt gatccgaggc ccagggactg cttcgccatg ccggcgccca tcgtcacgcg
     2401 cggggacgag ttgtgctcgg gatacggcac gacgccagag gcgaccccaa ggatcaccat
     2461 cgggtcgacc tcgatgtggg tgtgctcttt cgtgatcgcc gctttgaccg tgaacgtctt
     2521 gtggcagtgc gcgcacagga gctcggcctc gtcgtcgcgg ctccccatgt tcgcccacgt
     2581 gacgtcgttc cggctcagcg ggtgcttgca ctccttgcac cggctcggga cgtcgtacgg
     2641 atagatcgcg atgaacgtgt cttcctcttc ttccgcgtcg atccactcga cgatcccgtt
     2701 ccggacgagg tcggagaacc ggaggcggcc catcttcagt tcgtccacgt gcttgcgcga
     2761 gaagacgata tggccatcct tcacgacgag caacgggcgc cggatccggc cctcgtcgca
     2821 gttgatgatg atctctccca tgttctcgtc aaggcggaca ttgacttcgt ggctcaggag
     2881 gcccgatcgc cgacgctccc ggatctcggc cacgagcacc ttcgggtcct cgtggagccc
     2941 gacgagatcc ccgttgacgt agacgcgggt gagctgcgtc tgctggccct tgacctgctt
     3001 cgtgccgagg tccgccagga ggagcttgac ctcttcctcc gggaatccct ccgacacgtc
     3061 gatcacgagg gcgcagttct tgaccagccc gcaattctgg ccttccggcg tctcgttcgg
     3121 acagaggcgg ccccactgcg tcggatggag gtcgcgcgcc tcgaagtgcg gctgggaccg
     3181 cgtgagcggc gaggtgacgc gccgaagatg gctcagggcg ctcatgttcg acgttcggtc
     3241 gaggagctgg ctgacgccgg cgcgcccgcc gacccagttg cccgtcgcca gcgcgtggag
     3301 cagccgctgc gtgaggaggt ccggacggat cgccgaggaa atcttgagct cccggcgccg
     3361 cgcgtacgat cgctccaact ggtatttgag atccttca
//
LOCUS       DATLMA010000527         3942 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_716574, whole genome shotgun sequence.
ACCESSION   DATLMA010000527 DATLMA010000000
VERSION     DATLMA010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_716574"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1697
                     /locus_tag="VNA10_06775"
     CDS             27..1697
                     /locus_tag="VNA10_06775"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF003169.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HVG37420.1"
                     /translation="MALESARKFALQNAVLHEGKADPKAVLGRLLAEDAALRRRAQEA
                     TAYVERVVADVNDLGLETQRAELAAIAPELLEKIRHDVGPKELPPLPDAVDGAVVLRL
                     APYPSGPLHIGNARAFVLNDAYTKRYHGKLLLVFDDTIGSEDKPLLPEAFDQVKEGLD
                     WAGVEYDEVLYKSDRIPLHYEWAEKLLATGEAYVCECDAETLRKNREAMHACVHRIQD
                     VDETIAMWKAMLAGEYGEGEAVVRLKTDMAHPNPAFRDRVLFRVAVREHPRVGTRYRV
                     WPMLEFSWAVDDALLGVTHVLRGKDLVMEDLMETRIWDILQVERRPRFVHFGILRFKD
                     LELSKSRYRKEIAEGRLTGIDDPRTWTLQSLRRRGIRPAALREFVLSFGLSLNDIEVP
                     AETLYAENRKMIDKDANRYFFVPDPVAVEIAGLPPIEHVKAPLHPDFPGRGVREIPAG
                     PKVQVAREDFTKFRGQEVRLKDFCNVVLDHRARFVSMPNKEIPKIQWVTHGVQTHLVM
                     PDGTESRGLSEPLVGSLKVDDVVQFERVGFARIDHVSKAEVRAYFAHR"
     gene            2227..3387
                     /locus_tag="VNA10_06780"
     CDS             2227..3387
                     /locus_tag="VNA10_06780"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015491706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HVG37421.1"
                     /translation="MARFAKRVRSIEPSPTVRISDLIAESQGQGKKILSLAIGEPDFP
                     TPAHIVEAAKKALDDGYTKYTAAPGIRELREAIAEKSAKENGIPAKPENVIVAPTKHT
                     LFMTFMALLESGDEALIPDPGWVSYAPMVTLAGAKPVPIRAADEDGFVPSTETVADAI
                     TPRTRLIVLNSPSNPAGSVYTKAQMRGLADLAADHDLTVVSDEIYEKILYEGEHVSPA
                     SLEGMFDRTVTVNGFSKTYSMTGWRLGWLVAPTPMYQQIIKVQEHTITCATAFAQKAG
                     VAALRGPTGPLKAMVEEFRARRDIVLRELKKIDRVATDRPSGAFYVFPRLDVGMESAS
                     LAERILKEANVAVTPGSAFGEAGEGHLRLSYAASRETIVESIRRIADVLKGI"
     gene            complement(3439..>3942)
                     /locus_tag="VNA10_06785"
     CDS             complement(3439..>3942)
                     /locus_tag="VNA10_06785"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HVG37422.1"
                     /translation="ARTPEDALNLYEAATVGNARRLKTILGQSRVRVNEANKEEGFDP
                     LGLAAFFGHSEAVKVLLDHGADVNQKPPSRFANTAVDAAVSGDHADVVRILLAAGANP
                     NVRSEANYTTLHKAAVHGNLEVVRMLLDRGADVHAIRDGGHTPLDDAIEKGHTAIADL
                     LRARANT"
BASE COUNT          716 a         1277 c         1254 g          695 t
ORIGIN      
        1 aataggccga ggaagttcgc tccgacgtgg cgcttgaatc cgcacggaaa ttcgcgctgc
       61 agaacgctgt cctccacgaa ggcaaggcgg acccgaaggc ggtcctcggc cggttgctcg
      121 cggaggacgc cgccctccgg aggcgcgctc aagaggcgac ggcatacgtc gaacgcgtcg
      181 tcgcggacgt gaacgatctc gggctcgaaa cgcaacgggc ggagctcgcg gcgattgcac
      241 cggaactcct ggagaaaatc cgacatgacg tcggaccgaa ggagcttccg ccgctcccgg
      301 acgccgtcga cggagcggtg gtcctgcgcc tcgcgcccta tccgagcggc ccgctccata
      361 tcggcaacgc gcgggcgttc gtcctgaacg acgcgtacac gaagcgttac catgggaagc
      421 ttctcctcgt cttcgacgac acgatcggat ccgaggacaa gccgctcctc cccgaggcgt
      481 tcgaccaggt gaaggaaggc ctcgactggg ccggcgtcga gtacgacgag gtcctgtaca
      541 agagcgatcg gatcccgttg cactacgaat gggccgagaa gctcctcgcg accggcgagg
      601 cctacgtgtg cgagtgcgac gcggagaccc tgcggaagaa ccgcgaggcg atgcacgcct
      661 gcgtccaccg catccaggac gtcgacgaga cgatcgcgat gtggaaggcg atgctcgctg
      721 gcgagtacgg cgagggcgag gcggtggtcc gactcaagac ggacatggcc catccgaatc
      781 ccgcgttccg agaccgcgtc ctgttccgcg tcgcggtgcg ggagcatcct cgggtcggca
      841 cgcgataccg cgtctggccg atgctcgagt tctcgtgggc cgtcgacgac gcattgctcg
      901 gcgtgacgca cgtcctccgc ggcaaggacc tggtgatgga ggacctcatg gagacccgga
      961 tctgggacat cctccaggtc gagcgccgtc cacggttcgt gcacttcggg atcttgcggt
     1021 tcaaggatct cgaattgtcg aagtcacgat atcggaagga gatcgcggag ggccgtctca
     1081 ccgggatcga cgaccctcgg acctggacgt tgcaatccct gcgccgacgg gggatccgac
     1141 ccgccgccct ccgagagttc gtgctctctt tcggcctgag cctgaacgac atcgaggtac
     1201 ccgccgaaac gttgtacgcg gagaaccgca agatgatcga caaagatgcg aaccgctact
     1261 tcttcgtccc cgatcccgtt gccgtggaga tcgctgggct cccgccgatc gaacacgtga
     1321 aggcgcctct acacccggat ttccccggcc gtggcgtgcg cgagattccc gcgggtccga
     1381 aggtccaggt ggcccgcgag gacttcacga agttccgcgg ccaggaggtt cggctcaagg
     1441 acttctgcaa cgtcgtgctg gaccaccgcg cccgattcgt ctcgatgccg aacaaggaga
     1501 tcccgaaaat ccagtgggtc acgcacgggg tgcagaccca cctcgtcatg ccggacggca
     1561 cggagtcgcg cggcctctcc gagcctctcg tcggatccct caaggtcgat gacgtcgtgc
     1621 agttcgagcg tgtgggcttc gcgcgcatcg atcacgtgag caaggccgag gttcgggcgt
     1681 acttcgcgca ccgatgattc gtccagccgg gaggattttc actttcgctg acctctccgg
     1741 tctcgacctt cttctactgg gccgggtatg agtaattggt catactatgc ccatccggtc
     1801 cgcgtccgtt cgaagagctc gtaagcagag gccgatgcac ctttcagggt tcatcgtgac
     1861 ctgggatgta gatagtcgcg acaagtcact ctgtggtcgt ttgcatcgtt tcatttttgg
     1921 ctacattctc aacaagaacg agagagagta tcgatacccc ggcttcgtcg agcgaccagg
     1981 agttcgatac ctcggacaat ccgtcgtgtt cgtaatcccc gaccttctct cggatctgcg
     2041 tcaattccta gaagcgaacc ggatcgatca cgtgactatg accgcatccc tcggcgcgac
     2101 gatctctgct tcccgtccgt cccgacaacc ttaaccatct gagtaattac tcataattat
     2161 ggaagagagg tgaacggcct tgcgtggcgg tgaacccttt tctagcaacc cgtcttcccg
     2221 gctctcatgg cccggttcgc gaagcgtgtc cgttccatcg agccctctcc tacggtccgg
     2281 atcagcgatc tcattgcgga atcgcagggc caggggaaga agatcctttc gctggccatc
     2341 ggcgagccag atttcccgac gcctgcgcac atcgtcgaag cggcgaagaa ggcgctcgac
     2401 gacggctaca cgaaatacac cgccgctcct ggaatccgcg agttgcgcga ggcgatcgcg
     2461 gagaagtcgg cgaaggagaa cggcattccc gcgaagcccg agaacgtgat cgtcgccccg
     2521 acgaaacaca cgctcttcat gacgttcatg gccctcctcg aatcgggaga cgaggcgctg
     2581 atccccgatc ccggctgggt ctcctatgcg ccgatggtga ccctcgccgg tgcgaagccg
     2641 gtgcccatcc gcgccgcgga cgaagacgga ttcgtgcctt cgacggagac ggtcgcggac
     2701 gcgatcaccc cgcggacccg gctcatcgtg ctgaactcgc cgtcgaatcc cgcgggctcg
     2761 gtgtacacga aggcgcagat gcgcggcctc gcggacctcg cggcggacca cgacctcacc
     2821 gtcgtgagcg acgagatcta cgagaagatc ctctacgaag gcgagcacgt ctcgcccgcg
     2881 tcgctggagg gcatgttcga ccgcaccgtc accgtgaacg gcttctcgaa gacgtactcg
     2941 atgacgggct ggcggctcgg ctggctcgtc gcaccgacgc cgatgtacca gcagattatc
     3001 aaggtccagg agcacacgat cacctgcgcg accgcgttcg cgcagaaggc gggagtcgcg
     3061 gccctccggg gcccgaccgg tccgctgaag gcgatggtcg aagaattccg ggcgcggcga
     3121 gacatcgtgc tccgagaact caagaaaatc gatcgagtcg cgacggatcg tccgagtggc
     3181 gcgttctacg tcttcccccg tctcgatgtc ggaatggaga gcgcgtcgct cgcggaacgg
     3241 atcctcaagg aggcgaacgt cgccgtgacg ccggggagcg cgttcggcga ggcgggcgaa
     3301 ggccacctgc ggctctcgta tgccgcctcc cgcgagacga tcgtcgaaag catccgccgg
     3361 attgcggatg tcctgaaggg aatttgacaa gcccatgcag gacgattgac cggcccttcg
     3421 aaggccccga gacagacgtt aggtattcgc gcgcgcccgc agcagatccg cgatcgcggt
     3481 atgccctttc tcgatcgcgt catccaaggg ggtgtgaccg ccgtcgcgga tggcgtggac
     3541 gtccgcccca cggtccagca acatccggac gacctcgaga ttcccgtgca ctgccgcctt
     3601 gtggagggtg gtgtagttgg cctcgctccg cacgttcggg ttcgccccgg ccgcgagcag
     3661 gatccgcacg acgtccgcgt ggtctccgga gacggccgca tccacggccg tgttcgcgaa
     3721 ccgactcggt ggcttctggt tcacatcggc cccgtggtcc agcaggactt tgaccgcctc
     3781 ggagtggccg aagaacgccg cgaggccgag cgggtcgaaa ccttcctcct tgttcgcctc
     3841 gttgacccgg acgcgggatt gccccaggat cgtcttgagc cgccgcgcat tcccgaccgt
     3901 cgcggcctcg tacaggttga gcgcgtcctc cggagtccgg gc
//
LOCUS       DATLMA010000528         1344 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_891994, whole genome shotgun sequence.
ACCESSION   DATLMA010000528 DATLMA010000000
VERSION     DATLMA010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891994"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VNA10_06790"
     CDS             <1..370
                     /locus_tag="VNA10_06790"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HVG37423.1"
                     /translation="SDIEVHRANAGNDSGWIHLPLSSTNIDFVALANLSRLLALDRAP
                     AGKYTQLRLVVNSVDGVMNDGTPVTFEVPSGELKTTTPFDVPGSGSVQITLDFDLAGS
                     IHSAGGKWIFRPVLGSIQIS"
     gene            complement(400..>1344)
                     /locus_tag="VNA10_06795"
     CDS             complement(400..>1344)
                     /locus_tag="VNA10_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37424.1"
                     /translation="LVYVDQRTIETNLGSLVASIAVKLYGVGALAVVVRTPFEASVLR
                     DLRPFAGLRIRAAGKEESLDAYCRRLVDRIIEDLVPFLHDSYDVNVDPEPYTVYCVSV
                     TETPVRVFTTAWRREVTALLANDPRPDAISDEEVDDTWRNWFSYYQDDLVVLDWDAAL
                     VIEPSASYEDTLTVFELANLQLLELRTYDAFLDKVVDKAYDDLEDLFARSSFLRSGHE
                     TVKELAEVRMDLAEASFQVDNISKLWGDWFLGKVYRACAKKFELDSWRRNVEEKMKDL
                     SEIYEVAEAELEARRLLILEVLVVLLFVVDLVLIAFRG"
BASE COUNT          247 a          440 c          414 g          243 t
ORIGIN      
        1 ctcggacatc gaggtccatc gcgcgaatgc ggggaacgac agcggttgga tccacctccc
       61 tctgtcctcg acgaacatcg atttcgtcgc cctcgcgaat ctctcccggc tcctcgcgtt
      121 ggaccgcgcc ccggcgggca agtacacgca gctccgcctt gtcgtgaatt cggtggacgg
      181 agtcatgaac gacggcacgc cggtcacatt cgaggtcccg agtggcgagc tgaagacgac
      241 gacaccgttc gacgtgcccg gaagcgggtc cgtccaaatc acgctggact tcgatctcgc
      301 cggctcgatt cattcggccg gcgggaagtg gatcttccgt ccggtcctcg gatcaattca
      361 aatctcctga gtggcgtcgg accggattgg cctcgtcggt cacccgcgga acgcgatgag
      421 gacgagatcc acgacgaaca acaggacgac gaggacctcc aggatgagga gacggcgggc
      481 ctcgagctcg gcctcggcga cctcgtagat ctcgctgagg tccttcatct tctcctcgac
      541 gttcctccgc cacgaatcga gttcgaactt cttcgcgcac gcccggtaga ccttgccgag
      601 gaaccagtcg ccccagagct tcgagatgtt atcgacctgg aacgacgcct cggcgaggtc
      661 catgcggacc tcggccagct ctttcacggt ctcatggccg ctgcgcagaa acgagctgcg
      721 tgcgaacagg tcctcgagat cgtcgtatgc tttgtcgacg accttgtcca agaacgcatc
      781 atacgtgcgc aactcgagca gctgaaggtt cgcgagttcg aagaccgtca gcgtatcttc
      841 atacgaggcg ctcggttcga tcacgagcgc cgcatcccaa tccaggacca cgaggtcgtc
      901 ctggtagtac gagaaccagt tgcgccacgt gtcgtcgacc tcctcgtcgc tgatcgcatc
      961 tggccgcggg tcgttcgcca ggagggccgt cacttcgcgt cgccatgcgg tcgtgaagac
     1021 tcgcaccggg gtctcggtga cggacacgca gtagaccgtg tacggctccg gatcgacgtt
     1081 gacatcgtac gagtcgtgga ggaaagggac caggtcctcg atgatccgat ccacgaggcg
     1141 tcggcagtag gcgtccaggc tctcctcctt gcccgcggcc cgaatccgca ggcccgcgaa
     1201 cggccggagg tcccggagga cgctcgcctc gaacggcgtc cggacgacga ccgcgagggc
     1261 gccgacgccg tagagcttca ccgcgatcga ggcgaccaac gatccgaggt tcgtctcgat
     1321 cgtccgttgg tccacgtaga ccag
//
LOCUS       DATLMA010000529         1828 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_231125, whole genome shotgun sequence.
ACCESSION   DATLMA010000529 DATLMA010000000
VERSION     DATLMA010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231125"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VNA10_06800"
     CDS             complement(<1..371)
                     /locus_tag="VNA10_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008083983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HVG37425.1"
                     /translation="MDSAAHSKSSSHHGDGFVGVIYGDVGTTSFRCSVVEAVERHEFV
                     QVSHETCGQVLGRVDEIERKTDLSLDRAQLIGDGDPVDVEERVSAQVSVIGYRDDRGL
                     LQVPRTPFRAGEPVYKAETST"
     gene            complement(667..1281)
                     /gene="tmk"
                     /locus_tag="VNA10_06805"
     CDS             complement(667..1281)
                     /gene="tmk"
                     /locus_tag="VNA10_06805"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HVG37426.1"
                     /translation="MLNGFVTFEGIDGSGKTTVSRLVAKSLRAQGHRVYLTSEPTRTW
                     LGEAVRHAFDGEVGAVAESFLFLADRAAHLTEIQSHLEKRELVLCDRYADSTYAYQGA
                     RLEGLVADPIRFLQRASESWMLRPDLTILLRVPAESARKRIEGRPNLVRFEDLAFLKK
                     VAANYDRLARSRRFVVLDGTRGADAVSLDAISAIQRRLRRPRKR"
     gene            1375..1581
                     /locus_tag="VNA10_06810"
     CDS             1375..1581
                     /locus_tag="VNA10_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37427.1"
                     /translation="MARAADASGAGTISWKIHPDVRRLSDGGDREARCRKCHVRIVVL
                     PDDRRQGYCFDCYDSLEIHSKIAV"
     gene            complement(1578..>1828)
                     /locus_tag="VNA10_06815"
     CDS             complement(1578..>1828)
                     /locus_tag="VNA10_06815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37428.1"
                     /translation="LEDLKAWAWEVGAKAVEDRSPSAEEVTDEVEQALRYWDIVWKPN
                     VDLLRAQGRPNAWIEADVKRWKRQRQERRRELMGQATD"
BASE COUNT          342 a          590 c          538 g          358 t
ORIGIN      
        1 atcgtcgacg tctcggcctt gtacaccggt tcgcccgctc gaaacggggt gcgggggact
       61 tgcagcaggc cccgatcgtc gcgatacccg atcacgctga cctgggccga gacccgctcc
      121 tcgacgtcga cgggatcacc atccccgatg agttgggcgc ggtcgagcga caagtccgtc
      181 ttccgctcga tctcgtcgac ccggcccaac acctggccgc aggtctcgtg ggacacctgg
      241 acgaactcgt gccgttcgac ggcctcgacg accgagcagc ggaaagacgt cgtgcctaca
      301 tcgccgtaga tgacgccaac aaatccgtcg ccgtggtggg aagaggactt agaatgagcg
      361 gcggaatcca tccgtgcatc ccatgcgctg cgcgataatc cggcgtgccg ttaaatatct
      421 ttgtccacgg aagatagacc tgcatcatga gacgataaaa atcgcgaatg atattcttga
      481 gcggggtttt caagccgcta tccgggcaat cggtctcacc catggttggc cccggaccgg
      541 acgcttctct tcaggtcgtg tttggcagag catttctgtt gcaacttcaa cggggagatc
      601 tcgaaaccgc caaagtgttc gcccgggcat tccttctgag gaccgaactg gattctaaac
      661 gagcactcag cgcttccgcg gccgcctgag acgtctctga atcgcggaaa tcgcgtcgag
      721 actcaccgca tcggcacctc gggtgccatc gaggacgacg aatcgacggg accgcgcgag
      781 ccgatcatag ttcgcggcga ctttcttgag gaacgcaagg tcttcgaacc gaacgagatt
      841 cggccgaccc tcgatgcgct tccgcgccga ttcggcggga acccgcagaa gaattgtcag
      901 gtccggacgg agcatccacg attcgctcgc ccgctgcagg aatcggatcg gatcggccac
      961 gagaccttcg agacgcgccc cttgatatgc gtacgtcgaa tccgcgtatc gatcgcacag
     1021 gaccagctcc cgcttctcga gatgggattg gatttccgtc agatgggccg cgcgatcggc
     1081 gaggaacagg aaggattctg cgacggcgcc gacctcgccg tcaaatgcgt gacggaccgc
     1141 ctcgccgagc cacgtccttg tgggctcgct cgtcagatac acgcggtgtc cttgcgcccg
     1201 gagggatttc gcgacaaggc gactcaccgt cgtcttccct gaaccgtcga tgccctcgaa
     1261 cgtcacgaac ccgttgagca cgtgcgacga caacgaacgc gccgcacatt aaaccgccgt
     1321 tgtcccgtcc gaattgtggt cccgcacaac gtttttatag agtccggcgg ctccgtggcc
     1381 cgggcggccg acgcctcggg ggcgggtacg atttcatgga agatccatcc ggatgtgcgc
     1441 agactttccg acggtggcga ccgcgaagcg cgatgtcgga agtgtcacgt gcgaatcgtc
     1501 gtcctgccgg atgaccgccg ccaaggttac tgtttcgact gctacgattc ccttgagatc
     1561 cattcgaaga ttgcggtcta gtcagtcgcc tgtcccatga gctcgcgacg tcgctcttgt
     1621 cgctggcgct tccaccgctt cacgtcggct tcgatccacg cgttcggtcg cccttgcgcc
     1681 cgcagcaagt ccacgttcgg tttccaaacg atgtcccagt accgaagggc ctgttcgacc
     1741 tcgtccgtga cttcttcggc ggagggagag cgatcctcca ccgcctttgc tccgacctcc
     1801 cacgcccagg ccttgaggtc ctccagga
//
LOCUS       DATLMA010000530         1809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_352820, whole genome shotgun sequence.
ACCESSION   DATLMA010000530 DATLMA010000000
VERSION     DATLMA010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352820"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /gene="rrp4"
                     /locus_tag="VNA10_06820"
     CDS             complement(<1..607)
                     /gene="rrp4"
                     /locus_tag="VNA10_06820"
                     /inference="COORDINATES: protein motif:HMM:NF003181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000178 - exosome (RNase complex)
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex RNA-binding protein Rrp4"
                     /protein_id="HVG37429.1"
                     /translation="MQSSGALRPIVIPGEAVGGPGLKPGPGTYSEGGQVFAAHLGIRN
                     EHEGLVSVIPLNGRYIPQRGDAVIGEVIDQGPSHWLVDINSPYPAPLHATESPWRVEF
                     GDTARYLKVGDVIMCHVLSVDEIKRVQLTMQEREARRLNGGMVIEISPTKVPRVIGKQ
                     GSMVSLIMDLTGCRIYVGQNGRIWLDGDDRSAAVAEMAIRLI"
     gene            complement(678..1418)
                     /locus_tag="VNA10_06825"
     CDS             complement(678..1418)
                     /locus_tag="VNA10_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly factor SBDS"
                     /protein_id="HVG37430.1"
                     /translation="MPKELRSDRRDDIFKEYVIARIEKAGEKFEVMVKPDAVQRIRDG
                     KEVDLLRELAIDEIFKDAHKGSKASEEKMMDFFGTTEPLAVAKQIVQRGEIQLTTEQR
                     RQMLEAKRKQIVQYISANAINPQTGAPHPPQRIENAMEEAKVHVDPFKSVEEQVKEIL
                     EALRPLIPIRFEKVRIAVKLSAEDSAKAYGDLKSFGTILKEEWSPTGAWLGVVEMPAG
                     LQTEFLERLNAKTKGNVETRILKADQRI"
     gene            complement(1431..>1809)
                     /locus_tag="VNA10_06830"
     CDS             complement(1431..>1809)
                     /locus_tag="VNA10_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011696532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proteasome subunit alpha"
                     /protein_id="HVG37431.1"
                     /translation="CDYKQNYTQYGGVRPFGTALLVAGVDDLGTHLFETDPSGALVSY
                     KAGSIGQGRQAVMELLEEKYKDNMAQDDAMILGLQGLQKAAEGEKLDARAIEVGLIVE
                     GEKFRRLSESEVGQYLTRIPTAS"
BASE COUNT          284 a          604 c          526 g          395 t
ORIGIN      
        1 cgatcaggcg gatcgccatt tcggccaccg cggcgctgcg atcatccccg tccagccaga
       61 tccgaccatt ctgcccgacg taaatccggc agccggtcag gtccatgatc agggacacca
      121 tgctcccctg cttgccgatc acccgtggca ccttcgtcgg cgagatctcg atcaccatgc
      181 cgccgttcag gcgtcgggct tcgcgctcct gcatcgtcag ttgaactcgc ttgatctcgt
      241 cgacgctcag gacatgacac atgatcacgt cgccgacctt caggtaccgc gcggtgtcgc
      301 cgaattcgac ccgccagggc gattccgtgg cgtggagcgg cgcgggatag ggagaattga
      361 tgtcgacgag ccagtgggat gggccttggt cgatcacctc gccgatgacg gcgtcgcccc
      421 gttgcgggat gtaccgcccg ttgagcggaa tcacgctgac gagaccctca tgctcgttcc
      481 gaatgcccaa atgtgccgcg aaaacctgtc cgccttcgct gtatgtgccc ggcccgggtt
      541 tcagcccggg gccgccgacg gcttcgcccg gaatgacaat cgggcggagc gccccactgc
      601 tctgcatagg tgtctctctc tcacgcaacg cgtcgaaacc gaggcggcta cttgaggctt
      661 ccggtctttg cgggtcctca aatccgctgg tccgctttca gaatccgggt ctccacgttt
      721 cccttcgtct tcgcgttgag acgctcgagg aactccgtct gcaatccggc gggcatctcg
      781 acgacgccga gccaggcgcc ggtcggagac cattcttcct tcaggattgt gccgaatgac
      841 ttgagatcgc cgtacgcctt cgcgctgtcc tcggcgctca gtttgaccgc aatccggacc
      901 ttctcgaagc ggatcgggat gaggggccga agggcctcga ggatctcctt gacctgttcc
      961 tccacgctct tgaacgggtc gacgtggacc ttcgcctctt ccatcgcatt ctcgatccgt
     1021 tgcggcggat ggggcgcgcc ggtctgcgga ttgatcgcgt tcgcggagat gtactgcacg
     1081 atctgctttc gcttcgcctc caacatctgc cgacgttgct ccgtcgtcag ctggatctcg
     1141 ccgcgttgga cgatctgctt cgcgactgcc aggggctccg tcgtcccgaa gaaatccatc
     1201 atcttctctt cggacgcttt cgatcctttg tgggcatcct tgaaaatctc gtcaatggcc
     1261 agctctcgaa ggaggtcgac ctctttgccg tcccggatcc gctggaccgc gtccggcttc
     1321 accatgacct cgaacttctc gcccgccttc tcgatgcggg caattacata ttccttgaag
     1381 atatcgtcgc gacggtccga tcggagctct ttaggcatga cctcgctcgc ctacgacgct
     1441 gtcgggatgc gagtgagata ctggccgacc tcggactccg agagccgacg gaacttctcg
     1501 ccttcgacga tcaagccgac ctcgatcgcg cgggcatcga gcttctcgcc ctcggcggcc
     1561 ttctgcaggc cctgaagacc gaggatcatc gcgtcgtcct gggccatgtt gtccttgtac
     1621 ttttcttcga ggagttccat gaccgcctgg cggccctgtc cgatgctgcc ggccttgtac
     1681 gacacgaggg ctccgctcgg gtccgtctcg aacagatggg tcccaaggtc gtccacgccc
     1741 gccacgagga gcgccgtccc gaacggacgg acgccgccgt actgggtgta gttctgtttg
     1801 tagtcgcaa
//
LOCUS       DATLMA010000531         2632 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_532895, whole genome shotgun sequence.
ACCESSION   DATLMA010000531 DATLMA010000000
VERSION     DATLMA010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532895"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            493..1416
                     /locus_tag="VNA10_06835"
     CDS             493..1416
                     /locus_tag="VNA10_06835"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HVG37432.1"
                     /translation="MFGAGAIGSFFGALLSQRHDVTLIGRAEHISAIKSRGLRVRGKT
                     AIIAKPRAAIRVPRSARPDFVFVTTKSYDTASAMLALRPLADRAIFVTLQNGLGNAET
                     IAKTARRVVAGTTTNGVTFVGPGEIRHAGVGETVLGAWSGVDESELVRLRDLLADVGI
                     VASVTSDIRTELWSKLVVNASINPIAALAELPNGRIVRDKHLLAVVEMVCREATEVAK
                     AEGARVDYEELRHRTLLVAKRTASNRASMLQDLDRHHRTEIDAITGSIVRAAERHRIP
                     VPMNAALYALVRARETAFRSTSAVNVRDQTL"
     gene            1491..2039
                     /locus_tag="VNA10_06840"
     CDS             1491..2039
                     /locus_tag="VNA10_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TATA-box-binding protein"
                     /protein_id="HVG37433.1"
                     /translation="MAKIKIENVVASTSLGEQLDLQAIALALGGAEYEPEQFPGLIYR
                     LKEPKTATLLFRSGKVVCTGAKSLEHVKTAIDMVAKQIEAAGIPIKKNPVIEVQNIVA
                     SSDLGTEINLNAIAISLGLEKVEYEPEQFPGLVYRIDVPKVVVLLFGSGKLVCTGARK
                     PSDVEEAVEKITQELKAAGLLR"
     gene            2044..2508
                     /locus_tag="VNA10_06845"
     CDS             2044..2508
                     /locus_tag="VNA10_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004968937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HVG37434.1"
                     /translation="MLELRTEIEIDAPVERVWAVLIDFERFPDWNPFIRRIHGHAQVG
                     SRLDVLLGASGTRPMRFRPTVKAVVPNRELRWLGRLGLPRLFDGEHIFQIEPLGPIRS
                     RFVQRERFRGLLVPLLARSLSRDARRGFEEINRALQERVAVSAERRPAAGKA"
BASE COUNT          516 a          804 c          820 g          492 t
ORIGIN      
        1 atccctcgcg agtgtggcgc cggtcgagtt ccgaggtcag gtccgagggt gtgcgtggac
       61 tccaccgggc cgcgaacgac ccatctacgt gtcgattggc caccgcatct cgctcgagcg
      121 cgcatgcgaa gtggtccgtg cttccactct ccacggatat ccggaaccgc tgaggctcgc
      181 cgatcgaatt ggccgcgcga tgaaaaggaa taaggaatga aaaacgggaa aagggtgcga
      241 cgcgacgagt cgccgagcga catatcgtcg cgggggctgg ccgggcaagg gcctatctct
      301 tctttttctt gcccttcttt ttcttggcca cttctgtcct ccctattttc tgtatagaca
      361 aaaggggtct taaaagtagc gaagcgacaa aaaatcgtcc attttgcgat ttatataaaa
      421 acgagaagat gcgaaacgca catcgaaacc gttttggagt gcgcccacat cacgcaattc
      481 gtggaacttc tcgtgttcgg cgccggcgca atcggaagtt tctttggggc tcttctctct
      541 caacgtcacg atgtgacgct tatcgggagg gcagagcaca tttccgcgat caaatctcgc
      601 ggcctccgag ttcgtggaaa gactgcgatc attgcgaaac cgcgcgctgc gatccgcgtg
      661 ccgcgcagcg cgagaccgga tttcgtgttc gtcacaacca agtcgtacga taccgcgagt
      721 gcgatgctcg cattgcgtcc gttggccgat cgagcgatct tcgtcaccct tcaaaacggc
      781 ctcgggaacg cagagaccat cgcgaagacc gcgcggcgcg tcgtcgccgg aaccacgacg
      841 aacggagtca cgttcgtcgg ccccggcgag atccgtcatg cgggtgtcgg cgagacggtg
      901 cttggtgcgt ggagtggggt cgacgagtcg gagcttgtcc gcctgcggga tcttctcgcg
      961 gacgtgggaa tcgtcgcgag cgtgacgagc gacatcagaa cggagctgtg gtccaagctc
     1021 gtcgtgaacg catcaatcaa cccgatcgca gccctcgcag agctcccgaa cggtcggatc
     1081 gtacgagaca agcatcttct cgccgtcgtc gagatggtgt gccgggaggc gaccgaggtc
     1141 gcgaaggccg aaggggcgcg cgtcgattac gaggagttgc gacaccgcac gctcctcgtc
     1201 gcgaagcgga ccgcgtcgaa ccgagcgagc atgctacagg atcttgaccg acaccatcga
     1261 acggaaatcg acgcgatcac tggatcaatc gtgcgggcgg cggaacgcca tcggattccc
     1321 gttcctatga acgccgctct gtacgcactc gtgcgagcga gggagacagc gtttcgttcg
     1381 acctcggccg tgaacgttcg cgaccaaacc ttataaaggg gcatttaact cccctccgta
     1441 ccaaaccccg ttgcggccct ccaggctggc aacgagatgg tggtatctct ttggccaaaa
     1501 tcaagattga gaacgtcgtc gcctcgacct ccctcgggga gcaactcgac ctccaggcga
     1561 tcgcccttgc cctcggcggg gctgaatacg aaccggagca gttccccgga ctcatctacc
     1621 gattgaagga gccgaagacc gcgacgcttc tgttccggag cgggaaggtc gtctgcaccg
     1681 gcgcgaagag cctcgagcac gtcaagaccg cgatcgacat ggtcgcgaag cagatcgagg
     1741 ccgcaggcat cccgatcaag aagaatccag tgatcgaggt ccagaacatc gtcgcgtcct
     1801 cggacctcgg aacggagatc aatctgaatg ccattgcgat ctcgctcggc ctcgagaagg
     1861 tcgagtacga gccggagcag ttccctgggc tcgtgtatcg gatcgacgtg ccgaaggtgg
     1921 tcgtcctcct gttcggcagc ggcaagctcg tgtgcacggg ggcccgcaag ccctcggatg
     1981 tcgaggaggc cgttgagaag atcacgcagg agctgaaggc cgccggactc ctccgatagc
     2041 gcgatgttag aacttcggac cgagattgag atcgacgcgc cggtcgaacg cgtgtgggcc
     2101 gtcctgatcg atttcgagag gtttccggat tggaacccgt tcatccgacg gatccacggc
     2161 catgcgcagg tcggttcccg actcgacgtc ctcctcggag cgtcgggcac tcgcccgatg
     2221 cgatttcgac ccaccgtgaa ggccgtcgtc ccgaaccgcg agctccgctg gctcggtcgg
     2281 ctcggcctcc cgcgcctctt cgacggcgag cacatctttc aaatcgagcc gctcgggccg
     2341 atccgttccc ggttcgttca acgggagcga ttccgcggcc tactggtccc gctgctcgcc
     2401 cggagtctga gtcgggacgc ccgccgcggg tttgaggaga tcaaccgcgc gctccaagaa
     2461 cgcgtcgccg tttcggccga gcgtcggcct gcggcgggga aagcctaaga gagcgccctc
     2521 gtttggcgat gcgtggccat cttcgacaac cacatccatc tgcgtgcgag cttcaaaggc
     2581 gtcgaggccg cgaaggcgtt cgagaaagcc ggcggcacgg cgatcttgct ca
//
LOCUS       DATLMA010000532         1699 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_777194, whole genome shotgun sequence.
ACCESSION   DATLMA010000532 DATLMA010000000
VERSION     DATLMA010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_777194"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1460)
                     /locus_tag="VNA10_06850"
     CDS             complement(<1..1460)
                     /locus_tag="VNA10_06850"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HVG37435.1"
                     /translation="MKVVIFDGYVDEPSNFGVPPYISPYPRYVSGAIHDAGHSSEYVT
                     VDQVRAGHGLSGDLLVLISGPIVPGKYLRSLPISEREIVHHASAFEGPRVFGGPLARF
                     RYYDEALVEPFDWVALRDIDTAVFDRLTTGEWTNRDRTMEEWDRWAVLGADVVRSHPD
                     FPDPLTVELDTSKGCVRYLNKGCSFCIEPMYGKPKFRPVAGVLREVRRLAELGAVNYR
                     LGGQADFFSYQAIGLGSSVTPEINVSAIHELLEGIRTAAPGLKVLHTDNGDPAMMIAH
                     PDEAMAAMRDLVAHATPGTSLSFGLESADPRVTEANNLNIDADGCLEAIRMVNAVGRE
                     RGENGMPRLLPGLNFVAGLDGETKKTFDLNLEFLKRLLADDLWVRRINIRQVRPVRRE
                     FEPTGLYREFRRFKEAVRTSIDHEMLQRVIPEGTVLRDVFLEIQDGHVTYGRQIGTYP
                     ILVGLPYDMALNRFVDVRVTSHGQRSLTAIEYPLDV"
BASE COUNT          315 a          562 c          529 g          293 t
ORIGIN      
        1 ttcacgtcga gcgggtactc gatcgcggtg agggaccgct gcccatggct ggtcacgcgc
       61 acatcaacga atcggttcaa cgccatgtcg tacggaaggc cgacgaggat cggatacgtg
      121 ccgatctgtc ggccatacgt cacatggccg tcctgaatct ctaggaacac gtcccgaagg
      181 accgtgcctt ccgggatcac gcgctgcagc atctcgtggt cgatcgaggt ccgcacggcc
      241 tccttgaatc tccggaactc gcgatagagg ccggtcggct cgaactcgcg gcgcacgggg
      301 cggacctgac ggatgttgat ccggcggacc catagatcgt ccgcgaggag ccgcttcagg
      361 aattcgagat tcaggtcgaa cgtcttcttc gtctccccgt cgaggcccgc cacgaagttg
      421 agacctggga gaaggcgagg catcccgttc tcgccccgtt cgcggccgac ggcattgacc
      481 atccgaatcg cctcgaggca tccgtccgca tcgatgttga ggttgttcgc ctcggtgacg
      541 cgtggatccg ccgactcgag gccgaacgac aaactggtgc ccggagtcgc gtgggccacc
      601 aggtcccgca tcgccgccat cgcctcgtcc ggatgtgcga tcatcatcgc gggatcgccg
      661 ttgtccgtgt gcaagacctt caggcccggc gcggcggtcc gaatcccctc gaggagttcg
      721 tgaattgcgg acacgttgat ctccggggtg acggaggatc ccaggccgat tgcttgatag
      781 ctgaagaagt ccgcctgtcc tccgaggcga tagttcaccg cgccgagctc ggcgagtcgg
      841 cggacctctc gcaggacgcc agccaccggt cggaacttgg gcttgccgta catcggctcg
      901 atgcagaacg agcagccctt gttgagatac cgcacgcagc ccttcgaggt gtcgagctcg
      961 acggtcagcg gatccgggaa gtcgggatgg gaccggacca cgtccgcacc gagcaccgcc
     1021 cagcggtccc actcctccat cgtgcgatcg cggttcgtcc actccccggt cgtcaggcgg
     1081 tcgaagaccg cggtgtcgat gtcccgcaac gcgacccagt cgaacggctc gacgagcgcc
     1141 tcgtcgtaat agcggaagcg ggccagcgga cctccgaaca cccgcggacc ttcgaaggca
     1201 ctcgcgtgat ggacgatttc tcgctcactg atcggcaggc tgcgaaggta cttgcccgga
     1261 acaatcgggc ccgagatcag gacgagaagg tcgccgctca gcccgtggcc cgcgcggacc
     1321 tggtcgacgg tcacgtactc cgacgaatgg ccggcgtcgt ggatcgcgcc cgagacgtag
     1381 cgtggatacg gcgagatgta cggcggcacg ccgaagttcg acggctcgtc gacgtagcca
     1441 tcgaagatca cgaccttcat gggccggaat ctatgccgcg gcggcgataa aagggcttcg
     1501 ccccgcaagg cccttcctcg gctacttttt ctccggctcc ttacccgcga gccggctcac
     1561 caggatgatg aagacgacca ttacgaccgt gatcacaatc gcgctcacca gaaaatacgc
     1621 ccaaccaccc caatcgccct tcgttgctga cgtgcccaac ggaatccccg cagtagcgaa
     1681 acccgattgg acgaccgtg
//
LOCUS       DATLMA010000533         2488 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_655170, whole genome shotgun sequence.
ACCESSION   DATLMA010000533 DATLMA010000000
VERSION     DATLMA010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655170"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VNA10_06855"
     CDS             <1..299
                     /locus_tag="VNA10_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015493013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37436.1"
                     /translation="LFVECLLGRLDKGWTVEQLAAKLKTTKATIYRHINKLKEMDLLD
                     EVNVPERGTVRKGYRIRYGNLSKAWNFVESNIEIAIENYRKTVDHLEKLAEQRR"
     gene            305..580
                     /locus_tag="VNA10_06860"
     CDS             305..580
                     /locus_tag="VNA10_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37437.1"
                     /translation="MAEDIVSLTKGSRYRIESMETRERTKVTKGIFRGYATIGTDDAI
                     VVELDESHQELKGKMRLIPLHVVLAVDILEQVPGDAPKVEKRGTMYG"
     gene            630..1163
                     /locus_tag="VNA10_06865"
     CDS             630..1163
                     /locus_tag="VNA10_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37438.1"
                     /translation="MGSPRFARSGLRSPRGWLFLAFLGVWLYLASQLLRLYPARVAEV
                     LVLPVSEMRELLALSAGLGQLLFFGGLVAALWRANLAAGVSNAGIRGLAFGVAGVGIL
                     GLFEFALFLDWLVATFNPMALFAQSPVLDTGVIAGTALAFAGLASLVVGFAQSTDLFG
                     RRERAIAQRAAQQEETG"
     gene            1192..>2488
                     /locus_tag="VNA10_06870"
     CDS             1192..>2488
                     /locus_tag="VNA10_06870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine(34) 5-carboxymethylaminomethyl
                     modification radical SAM/GNAT enzyme Elp3"
                     /protein_id="HVG37439.1"
                     /translation="MTSEAVDLTLELPSSPEDRFLASFLAELREKIPTSKDELQQLKR
                     RIARSHGIAGIPSDSDVLGRLPRPIRDELVDLLRIKPARTASGVAVVTVMTAPHACPH
                     GVCTFCPGGPRFGTPQSYVGTEPAARRASAHGYDPGAQLTARLRSLEEIGHPTDKVDL
                     IVLGGTFTALDRGYQEWFVKGCLDAMNGCVSDSIETAQAANESAAARCIGLTIETKPD
                     CFLGSEVEACLALGTTRVELGIQSTHDDVLEAVHRGHTDAQSRAAFHGAKDAGLKVGA
                     HMMPGLPGSDRDRDLESFRTLFDDPDYRPDFLKIYPTLVLHGTPLYGLWKSGRYAPMT
                     TEEAVELIARVKMLVPRWCRIQRVQREIGAPEIQGGPKKGDLRVLARERLRAVGQRCV
                     CVRCREVGFRGIAPRPEALTMLRSDYDASGGTEIFLSIED"
BASE COUNT          423 a          793 c          827 g          445 t
ORIGIN      
        1 ggttgttcgt cgagtgcttg ctcggccggc tcgacaaggg gtggaccgtc gagcagctcg
       61 ccgcgaagct gaagacgacg aaggcgacga tctatcggca catcaacaaa ctgaaggaga
      121 tggacctcct cgacgaggtg aacgtgccgg agcgaggcac ggtccggaag ggctatcgca
      181 tccgatacgg gaatctctcg aaggcatgga atttcgtcga atcgaacatc gagatcgcga
      241 tcgagaatta tcgcaagacg gtcgaccatc tcgagaagct cgcggagcag cggaggtgac
      301 tgggttggcg gaagacatcg tctcgctcac gaaagggtcg cgctatcgga tcgagtccat
      361 ggagacccgc gagcggacca aggtgacgaa ggggatcttt cggggatacg cgacgatcgg
      421 gacggacgac gccatcgtcg tggaactcga cgaaagccat caagagctga agggaaagat
      481 gcgtctcatc ccgctgcacg tcgttctcgc ggtcgacatc ctggaacaag tgcccggtga
      541 cgcgccgaaa gttgagaagc gcggcacgat gtacggttga cttggttatc caaggcaagg
      601 ttcttgccgg ggaagcggtt ggcagaggca tgggttctcc tcggttcgcg cgctcgggcc
      661 tgcgatcccc ccgcggttgg ttgttcctcg ccttcctcgg agtgtggctg tacctcgcgt
      721 cccagttgct ccgcctgtat ccggcgcggg tcgctgaggt cctcgtcctc ccggtgtcgg
      781 agatgaggga gctcctcgcg ctctccgcgg gtctcggtca actcctgttc ttcggtggcc
      841 tcgtcgcggc gctctggcgg gcgaacctgg ccgcgggcgt atcgaacgcc gggatccgcg
      901 gcctcgcgtt cggtgtcgcc ggggtcggca tcctcggcct gttcgagttc gccctcttcc
      961 tcgattggct cgtagccacg ttcaatccga tggccctgtt tgcgcagagt cccgtcctgg
     1021 acaccggcgt catcgcaggc accgccctcg ccttcgcggg gctggcctcc ctcgtcgtcg
     1081 gcttcgcgca gtccacggac ctgttcggac gacgggaacg cgcgatcgcc cagcgcgcgg
     1141 cgcaacagga ggaaaccggc tgagccggag ggcgcaccgg tccgaggacc gatgacttcc
     1201 gaggccgttg acttgacgct cgagttgccg tcctctcccg aggatcgctt cctcgcgtcc
     1261 ttcctcgccg aattgcgcga gaagattccc acgtcgaagg atgagctgca acagctgaag
     1321 cggcgcatcg cgcgatctca cgggatcgcc ggaatcccga gcgattcgga cgtcctcggt
     1381 cggctccctc gtccgatccg cgatgaattg gtggatctct tgcgcatcaa gcccgcgcgc
     1441 accgcgagcg gcgtcgccgt cgtgaccgtg atgaccgcgc cgcacgcctg cccccacggc
     1501 gtgtgcacct tctgtcccgg tggaccgagg ttcggtacgc cgcagtcgta cgtcggcacg
     1561 gagcccgcgg cgcgacgcgc gtcggcccac ggctacgatc cgggcgcgca actcacagct
     1621 cggctgcggt ccctcgagga gatcggtcac cccacggaca aggtcgatct gatcgtcctg
     1681 ggagggacct tcacggcgct cgaccgcgga taccaggagt ggttcgtgaa aggctgtctc
     1741 gacgcaatga acgggtgtgt ctcggattcg attgagacgg cacaagccgc gaatgagtcc
     1801 gcggcggccc ggtgtatcgg cctcacgatc gagacgaagc ccgactgctt cctcgggtcg
     1861 gaggtcgaag cgtgcctcgc gctcggcacg acccgcgtgg aacttggcat ccagtcgacg
     1921 cacgacgacg tcctcgaggc ggtgcaccgc ggccacacgg atgcccagag ccgcgccgca
     1981 ttccacggag cgaaggacgc cggcttgaaa gtcggtgcac acatgatgcc gggcctcccc
     2041 ggttcggatc gcgatcggga cctcgaatcc ttccggaccc tgttcgacga tccggactat
     2101 cgtccggact ttctcaaaat ctatccgacg ctggtcctgc acggaacgcc gctgtacgga
     2161 ctctggaaat ccggtcgata tgcgccgatg accacggaag aggccgtcga actgatcgcg
     2221 cgcgtgaaga tgttggtacc gcgatggtgt cggattcagc gcgtgcagcg cgagatcggt
     2281 gcgccggaaa ttcagggtgg gccgaagaag ggcgatctcc gcgtccttgc gcgtgaacgg
     2341 cttcgggccg tcggccaacg atgcgtatgc gtgcggtgcc gcgaggtcgg cttccgaggg
     2401 atcgcgcccc gcccggaagc cctcaccatg cttcgctccg actacgacgc gtccggtgga
     2461 accgagatct tcctcagcat cgaggacc
//
LOCUS       DATLMA010000534         1325 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_353092, whole genome shotgun sequence.
ACCESSION   DATLMA010000534 DATLMA010000000
VERSION     DATLMA010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353092"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VNA10_06875"
     CDS             <1..717
                     /locus_tag="VNA10_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014066733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HVG37440.1"
                     /translation="VLLKKPNVYGSIFRFEGQASVFDAVRGPCYRCLYAEPPPPGLVP
                     SCAEGGVLGVLPGIVGSIQAIEAIKLLLGKGDTLIGRLLVFDALRMKFRELKLRKNPE
                     CPICGTNPTIKELIDYEEFCGLRAASEQLGEELQITVEELKEKIDAGREPVLLDVREP
                     MEWEIARLDKAVLMPVAQVPGRVNELSTADEIVVYCKTGVRSGRITNFLREMGFRKVK
                     NLVGGIDEWAEKVEPEMPRY"
     gene            765..1082
                     /locus_tag="VNA10_06880"
     CDS             765..1082
                     /locus_tag="VNA10_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37441.1"
                     /translation="MPLDPGTVHRFAMLERAVKSFAKTGRFDESLKLIEEMLEIAPED
                     AGLSKLKVRVAAEMVHQAIQAQKIGAATQIVGLVETKIPAAHLGQTEKELLAKAKENL
                     YSM"
     gene            1123..>1325
                     /locus_tag="VNA10_06885"
     CDS             1123..>1325
                     /locus_tag="VNA10_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37442.1"
                     /translation="MSPKASTDEYVKEIESMRREKDHFFQEDAESPIPHRLRHDFKGL
                     AYFPPYPSDRVRAKLIKDPNPQRV"
BASE COUNT          283 a          399 c          411 g          232 t
ORIGIN      
        1 gtcctcctga agaaaccgaa cgtctacggc tcgatcttcc gattcgaggg ccaggcgagc
       61 gtcttcgacg ccgtgcgggg cccctgctac cggtgtttgt acgcagagcc accgccgccc
      121 ggcctcgtgc cctcgtgcgc ggaaggcggc gtgctcggcg tgctcccggg catcgtcgga
      181 tcgattcagg cgatcgaggc aatcaagctg ctcctcggga agggcgacac gctcatcggc
      241 cggctcctcg tgttcgacgc gctccgcatg aagttccgcg agctcaagtt gcggaagaac
      301 cccgaatgtc cgatttgcgg aaccaatccg acgatcaagg agctcatcga ttacgaagag
      361 ttctgcggac tccgtgccgc atcggagcag ctcggcgaag agctccagat cacggtcgag
      421 gagttgaaag agaagatcga cgcggggagg gagccggtcc tgctcgacgt gcgggagccg
      481 atggaatggg agatcgcgcg actcgacaag gccgtcctga tgcccgtcgc ccaagttcca
      541 ggccgggtga acgagctcag caccgcggat gagatcgtcg tgtattgcaa gacaggcgtc
      601 cgctccgggc ggattacgaa cttcctccgg gagatgggtt tccggaaggt gaagaacctc
      661 gtgggcggga ttgacgaatg ggcagagaaa gtcgaacccg agatgcctcg atactagttc
      721 gccggccaca agtcataagc cagaaacgaa ctctgccggc attcatgccc ctcgatcccg
      781 gcacggtgca tcggttcgcg atgctcgaac gcgccgtgaa gtcatttgcg aagaccggcc
      841 gtttcgatga atccctcaaa ctcatcgagg agatgctcga gatcgccccc gaggacgcgg
      901 gcctgtcgaa attgaaggtg cgggtcgccg ccgagatggt ccatcaagcc atccaggcgc
      961 agaagattgg cgccgcgact cagatcgtcg ggctcgtcga gacgaagatt cccgcggcac
     1021 acctcggcca gactgagaag gagctcctcg cgaaggcaaa agaaaacttg tactcgatgt
     1081 gagtcgaaca catttatcgc ggacgatgac ggtcggagac ccatgtcgcc caaagcttcc
     1141 accgacgagt acgtgaagga gatcgagtcc atgcgtcgtg agaaagacca cttcttccag
     1201 gaggacgccg agtctccgat cccgcatcga cttcgtcacg acttcaaggg cctcgcgtac
     1261 ttccctccat atccgtctga tcgggttcgc gccaaattga tcaaggaccc gaacccccag
     1321 cgggt
//
LOCUS       DATLMA010000535         1095 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_778008, whole genome shotgun sequence.
ACCESSION   DATLMA010000535 DATLMA010000000
VERSION     DATLMA010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778008"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..948)
                     /locus_tag="VNA10_06890"
     CDS             complement(7..948)
                     /locus_tag="VNA10_06890"
                     /inference="COORDINATES: protein motif:HMM:NF016980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37443.1"
                     /translation="MVRRWLVEETSHGTVGREVEILDQPNRVAALASPLAWRILQELA
                     KAPDYPSALAERLKVHEQKVYYHVRRLEAAGLLEVLREEPKRGASARILAPTAEAFAI
                     VLKGRGSPVASPMLPHAGVVTRFLEEFTRDGVFDGSIVVGSPYTHGPFNTTARDSPYA
                     VELGFFLGRLFAPPKGLVVRLDTEVKALGAGKEDMILVGGPVANIITMDLNPHLAVNF
                     DWRQVWRMESSRTKRPYADEQVGLIAKVRNPWNSARVIVLLSGLHAVGTVAAILGLTH
                     FAEDVLDGYTPGTDFYRVVAGQDRDGDGRLDAVSILE"
BASE COUNT          200 a          367 c          334 g          194 t
ORIGIN      
        1 ggatgatcac tcgaggatcg agacggcgtc gagccgtccg tcgccatcgc ggtcctgtcc
       61 ggcgacgact cgatagaaat ccgttcccgg cgtatatcca tcgaggacgt cctccgcgaa
      121 gtgcgtaagg ccgagaatcg cggccaccgt cccaacggcg tgcaacccgc tcaacaggac
      181 gatcacgcgg gcgctgttcc agggattgcg gaccttcgcg atgagaccca cttgttcgtc
      241 cgcatacggc cgcttcgtgc gggaggactc catccgccac acctgcctcc agtcgaagtt
      301 caccgccaga tgcgggttca gatccatcgt gatgatgttc gcgaccggcc cgccgacgag
      361 gatcatgtcc tcctttcccg ccccgagcgc cttgacctcg gtgtcgaggc ggaccaccaa
      421 acccttcggc ggagcgaaca gacgaccaag gaagaacccc agttcgaccg cgtacggcga
      481 gtcgcgggcc gtcgtgttga acgggccgtg cgtgtatggc gatccgacca cgatcgagcc
      541 gtcgaacacg ccgtcgcggg tgaattcctc gaggaagcgg gtgacgactc ccgcgtgagg
      601 gagcatcgga gaggcaaccg gactcccgcg acccttgagg acgatcgcga aggcctccgc
      661 ggtgggtgcc aagatgcggg cggacgcacc gcgcttcggc tcctctcgaa ggacctccag
      721 gaggcccgcg gcctcgagcc gccggacgtg gtagtagacc ttctgttcgt ggaccttgag
      781 ccgctccgcc aacgcgctcg gatagtcggg tgccttcgcg agctcctgca ggatgcgcca
      841 cgcgagcggc gaggccaacg ccgccacccg gttcggctga tcgaggatct cgacctcccg
      901 gcccacggtt ccgtgcgagg tctcctcgac gagccaacgt cggaccacgg ccttcgaacg
      961 acctcattct attaacgctt ttgtaatggt tatccaaaag ttgtagatgc atttataata
     1021 cccgtcggac ctcacgtcga gttatgtcgg atcgccggct cgtcctcccc ccttctgaac
     1081 cgatggaatc atacg
//
LOCUS       DATLMA010000536         3819 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_838046, whole genome shotgun sequence.
ACCESSION   DATLMA010000536 DATLMA010000000
VERSION     DATLMA010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3819
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838046"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VNA10_06895"
     CDS             complement(<1..596)
                     /locus_tag="VNA10_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008081944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HVG37444.1"
                     /translation="MTDDGAVWDVRGLRKLFPLKAGLFDALRGREKQVHAVDGIDFSI
                     KRSEILGIVGESGCGKTTTGRLLVKLEEPTEGQLLFHGKDIAPLKGADLKDFRRRVQM
                     IFQDPYESLNPRFTVMDAVAEPLTVHGMTDSLEDREDLIAKALEHAELAPASDFMYRY
                     PHELSGGQRQRVAIARAIVLQPEFIVADEPVSMLDVSIR"
     gene            complement(593..1861)
                     /locus_tag="VNA10_06900"
     CDS             complement(593..1861)
                     /locus_tag="VNA10_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008086051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HVG37445.1"
                     /translation="MALLEIRNLRTYYRVRKGEVKAVDGVDFTADRSKTVGLVGESGC
                     GKTTLAFGILQILPSNARIVTGEVRVGGELVFRAPLTHELKFLLEQDGSAHAVRDILA
                     MRAAGMEADKASTAAGELMPILQQETSLIEDAQEMIAKGQADPEALKGDLLDLVERRE
                     RAWNRGFTRRAIQRSQRNRMQTMRWSQVSMIFQGAMNAFNPVYRVGDQIEEALEAHMD
                     MTSEQRQARIQELFRLVGMTADRSEGYPHEFSGGMKQRAMIAMALACKPELIIADEPT
                     TALDVIMQDRILGEIRDLQRELDLAMMIITHDISVVAEVSDRIVIMYAGEVVEEGTTE
                     SVFERPSHPYTIGLLEAFPSVKGPRKKLRAIPGSPPDLVNPPSGCRFHPRCRFAQDIC
                     TRERPELIEVDAGHRSRCHFTKEIFNGSLA"
     gene            complement(1869..>3819)
                     /locus_tag="VNA10_06905"
     CDS             complement(1869..>3819)
                     /locus_tag="VNA10_06905"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HVG37446.1"
                     /translation="AGGTKGWTAPDQTAAFTTPKPITAGPVAVNFGSKTNPSYLDFVV
                     YIGTSDGTFYALNDSAVEFDGETALPGGPNVVSRSLIGSVSSIAVWSEPTDDPPLPAT
                     PARNPGESVFVGTSAGYLYAFAASDLSPLWNRSFGAGVTVRMASGPMNPPTNPSYSPA
                     LTEDGQRLFVNAGDWQSFYSMNGTLAWTGFPVSTPWTSAPVVSLPSILADGSFGELVY
                     AASDDGWLFARKVATGASYAPWETSPAAQLHPTLAIRTIPVMQTAAQQDRGPLFSPFI
                     DSTTVYVTSSSGILYSIARDAVGTLSAGTVKWRFVDKVLQERGFKFTAPPVLAVAQRI
                     IFGVGVDPRGTTNTSDDQGILYSLSEVGGLLWRKDFDGPLDASPSIWTTQVGNQLNIP
                     NVWVGTGKGWVYAISSTGKYLAPLPPGTYPSGNQYLWGTDLQGRDIFSQFIWGSRIAL
                     IVGFSAALLSVGIGLVVGLVAGYLGRKTDIVLMRFTDVILVLPTLPLLIILAAVLGSS
                     IWNIILVIALLAWPSTARVIRSEILSLKERPYIQSARVTGASSVRIMFRHLTPNVMPL
                     VFLYMTFAVSGAILFEAALSFIGLGDPNTPSWGQMLSTVQQADLLRAYWWLLPPGLGI
                     TVLSLAFFLTGRAFEQIINPRLRTR"
BASE COUNT          663 a         1222 c         1273 g          661 t
ORIGIN      
        1 cggatcgaga cgtcgagcat ggacaccggc tcgtccgcga cgatgaactc cggctggagg
       61 acgatcgccc gcgcgatcgc gacccgctgc cgctgaccgc cgctcaactc gtgcggatac
      121 cggtacatga agtccgatgc gggcgcgagt tccgcatgct cgagcgcctt cgcgatcagg
      181 tcctcccggt cctccaggga atccgtcatg ccgtggacgg tcaggggctc cgcgaccgcg
      241 tccatcacgg tgaagcgcgg gttgagcgac tcgtacgggt cctggaagat catctgcacc
      301 cggcggcgga agtctttcag gtccgcgccc ttgaggggcg cgatgtcctt gccgtggaag
      361 aggagctggc cctccgtggg ctcttcgagc ttcacgagga ggcggccggt cgtcgtcttc
      421 ccgcagcccg actcccctac gatcccgagg atttcgctcc gcttgatcga gaagtcgatc
      481 ccgtcgacgg cgtggacttg cttctctctg ccgcggaggg cgtcaaacaa tcccgccttc
      541 aacgggaaga gcttccggag cccgcggacg tcccaaacgg cgccgtcgtc cgtcatgcga
      601 ggctcccgtt gaatatttcc ttcgtgaagt ggcagcggga ccggtggccg gcatcgacct
      661 cgatgagttc gggacgctca cgcgtgcaga tgtcctgcgc gaaccgacag cgggggtgga
      721 agcggcaacc gctcggcggg ttcacgagat ccggcggcga tccgggaatc gcccggagct
      781 tcttcctcgg gcccttcacg ctcgggaacg cctcgaggag accgatcgtg tatggatgcg
      841 aaggccgttc gaagacgctc tccgtggtcc cctcctcgac gacctcgccc gcgtacatga
      901 tgacgatgcg gtcggagact tccgcgacga cggagatgtc gtgcgtgatg atcatcatcg
      961 cgaggtccaa ctcccgctgc agatctcgga tctctccgag gatccggtcc tgcatgatga
     1021 cgtccagggc cgtcgtgggc tcgtccgcga tgatcagttc cggcttgcag gcgagcgcca
     1081 tcgcaatcat cgcgcgctgc ttcatgccgc cggagaactc gtgcggatat ccttccgacc
     1141 gatccgcggt catgccgacg agccggaaca gctcctggat ccgagcctgg cgctgctcgg
     1201 acgtcatgtc catgtgggcc tcgagcgcct cctcgatctg atcgccgact cggtacacgg
     1261 ggttgaaggc gttcatcgcc ccctggaaga tcatcgagac ctgggaccat cgcatcgtct
     1321 gcatgcgatt ccgttgggat cgctggatcg cgcgtcgcgt gaatccgcgg ttccacgcgc
     1381 gctcgcgtcg ctcgacgagg tcgaggaggt cccccttcag agcctcgggg tccgcctgac
     1441 ccttcgctat catctcttgg gcgtcctcga tcaaggaggt ctcctgctgg aggattggca
     1501 tgagctcccc tgcggccgtg gaggctttgt ccgcctccat tcccgccgcg cgcatcgcca
     1561 ggatgtcgcg cacggcatgt gcggatccgt cctgctcgag gaggaacttc agctcgtgcg
     1621 tgaggggtgc tcggaagacg agctcgccgc cgacgcgcac ctcgcccgtg acgatccgcg
     1681 cgttcgaggg gaggatctgc aagatgccga aggccaaagt cgtcttgccg caccctgatt
     1741 cgccgacgag cccgacggtc ttgctgcggt ccgcggtgaa atcgaccccg tcgacggctt
     1801 tgacttcccc tttgcggact cggtaatacg ttcgcagatt ccggatctcg agcagcgcca
     1861 ccgatggctc acctcgtgcg cagccgggga ttgatgatct gctcgaacgc ccgaccggtg
     1921 aggaagaacg cgagcgagag gactgtgatc ccaaggcccg gcgggaggag ccaccagtac
     1981 gcgcggagga ggtccgcctg ctgcacggtc gacagcatct gcccccagct cggggtgttc
     2041 gggtccccga ggccgatgaa gctgagggcc gcctcgaaga ggatcgcgcc gctcaccgcg
     2101 aacgtcatat aaaggaacac gagaggcatg acgttcggcg tcaggtgtcg gaacatgatc
     2161 cggacactgc tcgcgccggt cacccgcgcc gattggatgt acggtcgctc cttcaggctg
     2221 agaatctcgg accggatgac ccgcgcagtg ctcggccatg cgaggagcgc gatcacgagg
     2281 atgatgttcc agatgctcga accgaggacg gcggcgagga tgatgaggag cggcaacgtc
     2341 gggaggacga ggatgacgtc cgtgaaacgc atgaggacga tgtccgtctt ccgacccagg
     2401 taacccgcca cgaggccgac gacgaggccg atgccgacgg acaagagagc ggcggaaaag
     2461 ccgacgatca gggcgatccg ggatccccaa atgaactggc tgaagatgtc ccggccctgc
     2521 aagtccgtgc cccagaggta ctggttgccg gacggatacg tcccgggtgg cagcggcgcg
     2581 aggtacttcc cggtcgacga gatcgcatag acccagcctt tccccgtgcc gacccagacg
     2641 ttggggatgt tgagttggtt gccgacctgc gtggtccaga tcgacggcga cgcatctaac
     2701 gggccatcga agtccttgcg ccagagcagg ccgccgacct ccgagaggct gtataggatc
     2761 ccttggtcgt ccgaagtatt cgtcgtccct ctcggatcga cgccgacccc gaagatgatc
     2821 cgttgggcga ccgcgaggac tggcggtgcc gtgaacttga atcctcgctc ttgcaagacc
     2881 ttgtcgacga agcgccactt caccgttccg gcgctgaggg tgcccaccgc atcccgagcg
     2941 atcgagtaca gaattccgga gctggaggtc acgtagaccg tggtcgagtc gatgaaggga
     3001 gagaagagtg gcccgcgatc ctgctgggct gcggtctgca tcacgggaat cgtccggatc
     3061 gccaaggtcg gatggagttg agcggccggg gaggtctccc aaggcgcata cgacgcgccg
     3121 gttgcgacct tgcgggcgaa gagccatccg tcgtcggagg cggcatagac gagctcgccg
     3181 aaactgccat ccgccaggat ggacgggagc gacaccaccg gtgcggaggt ccagggcgtg
     3241 ctcacgggaa atccggtcca cgccagcgtc ccgttcatcg agtagaacga ctgccagtcg
     3301 cccgcgttga cgaacagccg ctggccgtcc tcggtgagcg cgggcgaata gctcgggttt
     3361 gtcggcggat tcatcggccc ggatgccatg cgaaccgtga ctcccgcgcc gaaggaccgg
     3421 ttccatagcg gggacagatc cgacgcggcg aatgcgtaca aatatcctgc tgaggtcccg
     3481 acgaagaccg actcgcccgg gttccgggcg ggcgtcgcgg gcaagggcgg gtcatccgtc
     3541 ggctccgacc acactgcgat cgagctcacg ctcccgatca gcgaccgcga aaccacgttc
     3601 ggtccgccgg ggagggcggt ctcgccgtcg aactcgacgg cgctgtcgtt aagcgcgtag
     3661 aacgtcccat ccgacgtccc gatgtagacg acgaagtcaa ggtacgaggg gttcgtcttg
     3721 ctgccgaaat tcaccgcgac ggggcccgcc gtgatgggct tgggcgtcgt gaacgcggcc
     3781 gtttgatccg gagcggtcca tcccttcgtc ccgccggcc
//
LOCUS       DATLMA010000537         1027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_717357, whole genome shotgun sequence.
ACCESSION   DATLMA010000537 DATLMA010000000
VERSION     DATLMA010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717357"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="VNA10_06910"
     CDS             complement(<1..728)
                     /locus_tag="VNA10_06910"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HVG37447.1"
                     /translation="MATDPVCGMYVDEGTHLTAVVRGRQYYFCSETCLEAFAAPEREI
                     ARLKRLTLFSLGVGIPLFLIGFGQGLGWWLGGLEEPVNLVFFVLATPVQFVAGYRFYR
                     GFVDAIRNKSANMDVLIAIGTTAAWAYSAVVTFLPLLGVPLVDKGTYYDTAAVIIGLI
                     LLGKYFEEIAKGKAGDAIRKLMDLAPRTARVVRDDREEEIPVELVQVNDLVIVRPGER
                     IPVDGVIVGGFSAVDESMITGESIP"
     gene            complement(827..>1027)
                     /locus_tag="VNA10_06915"
     CDS             complement(827..>1027)
                     /locus_tag="VNA10_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37448.1"
                     /translation="EARTDIPDARAAVALVHALDLLLPEIEMDLKPLQAQAKALEDHL
                     TKLKQQAAAVVVPQPIPSDMYR"
BASE COUNT          179 a          334 c          339 g          175 t
ORIGIN      
        1 gggatcgact cccccgtaat catcgactcg tcgacggcgg agaacccccc gacaatcacc
       61 ccgtcgacgg ggatgcgctc ccccggccgg acgatgacca gatcgttcac ctggacgagc
      121 tcgacgggaa tctcctcctc gcggtcgtcc cggacgacgc gcgccgtgcg aggggcgagg
      181 tccatgagct tgcggattgc gtcgcccgcc tttcccttcg caatctcctc gaagtacttg
      241 ccgaggagga tgagaccgat gatcacggcc gcggtgtcgt agtacgtgcc tttgtccacg
      301 agcggaacgc caagcagtgg gaggaatgtc acgacggcgc tgtaggccca tgccgccgtg
      361 gtgccgatcg cgatgaggac gtccatgttc gcgctcttgt tccggatggc atcgacgaag
      421 ccgcggtaga agcggtagcc ggcgacgaac tgcaccggcg tggcgaggac gaagaacacg
      481 aggttcacgg gttcttcaag gcctccaagc caccagccca acccctgacc gaagccgatg
      541 aggaacaacg gaatgccgac tccgaggctg aagagagtga gccgcttcaa gcgggcgatc
      601 tccctctccg gcgcggcgaa cgcctccagg cacgtctcgg aacagaagta gtactggcgg
      661 ccgcgaacaa ccgcggtgag gtgggtgccc tcgtccacgt acatgccgca caccggatcc
      721 gttgccatgc tcacctcgaa cgcgaccgcg cgaacggccg cgtcaatctg cctccgtctc
      781 ctttcggtag aggattggtg acccgtccct tatgtcattg tgccgctcag cgatacatgt
      841 cgctcgggat cggctggggc acgacgacgg ccgcggcctg ctgcttcagc ttcgtgaggt
      901 ggtcctcgag ggccttcgcc tgcgcctgca ggggtttcag gtccatctcg atctcgggga
      961 ggagcaggtc gagggcgtgc acgagggcga ccgccgcgcg ggcgtccggg atgtcggtcc
     1021 gggcttc
//
LOCUS       DATLMA010000538         2501 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_533442, whole genome shotgun sequence.
ACCESSION   DATLMA010000538 DATLMA010000000
VERSION     DATLMA010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533442"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VNA10_06920"
     CDS             complement(<1..388)
                     /locus_tag="VNA10_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37449.1"
                     /translation="MAHPEPAGHEEEEHHGSPWPIIIAVGMGVGYVGIVTPSIPMLLA
                     GVVIFGGGAGGWIHQDMQRPSSAFYGFAAAVESRLPQVSARKLGIWLFLATEIMFFSA
                     IIGASWTLRLRTTTPGAAFQGPWALPG"
     gene            complement(455..640)
                     /locus_tag="VNA10_06925"
     CDS             complement(455..640)
                     /locus_tag="VNA10_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37450.1"
                     /translation="MPRIEISTNIDAFIPPAGHVIVMRFRPEGPRIPVPNWLIEWSKS
                     RDLFLSLAHDPWVFRPN"
     gene            880..1668
                     /locus_tag="VNA10_06930"
     CDS             880..1668
                     /locus_tag="VNA10_06930"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG37451.1"
                     /translation="MKTKLALLGEGGVGKTSLIRRFVLNEYQDTYLHTVGTRVSKVEL
                     TVPHGADTEVQMDMSIFDIMGQRGFKDLVRETYYHGAQGLMGVCDLTRKDSLYALNEW
                     IPSALEIAGDVPVYLIVNKRDLDERRAISEDEVRHVGEAFAAPIVYTSARTGALVDDA
                     FNALAIEMVDRAFRQEAARAVERGLRDKVLLLLDKRGSIGLKKSQFFEILRGVNLDDL
                     QSELGRLEGEGLVTLLWHGASDFTAVITPRGTAATKRESAWDEE"
     gene            1783..2295
                     /locus_tag="VNA10_06935"
     CDS             1783..2295
                     /locus_tag="VNA10_06935"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="METTL5 family protein"
                     /protein_id="HVG37452.1"
                     /translation="MAAEVAYLASARGDVESRSAADLGCGNGVLAIAAKLLGAGRVMG
                     LDSDPTAVEIARRNAERARVDVEWRLADVRSIGDRFETIFMNPPFGSQRRHADRPFFD
                     AALEWGHVVYAFLNAKAEAYVRRRIESGSGKITDRLPYAFPIPHSFDFHREEVRRIDV
                     VLYRFEPAKG"
BASE COUNT          464 a          788 c          822 g          427 t
ORIGIN      
        1 cgccgggcaa ggcccacggt ccttggaagg cggcgcccgg tgtcgtcgtc cggagtcgca
       61 atgtccagga ggctccgatg atcgcagaga agaacatgat ctcggtcgcg aggaacagcc
      121 agatcccgag cttccgggca ctcacctgcg ggagcctcga ttcaacggcg gcggcgaatc
      181 cgtagaatgc gctcgacggc cgttgcatgt cctgatgaat ccatccgccc gcgcctccac
      241 cgaagatgac gacaccggcg aggagcatcg gaatgctcgg cgtcacgatt ccgacgtacc
      301 ccacgcccat gcccaccgcg atgatgatgg gccacgggct gccgtggtgc tcctcctctt
      361 cgtggcccgc gggctccggg tgcgccatcg actgctcgga ccggcgcagt gcatcctccg
      421 ggctgctata acatcttcgg tttttccgcg ccaactaatt cgggcggaag acccacgggt
      481 cgtgggcgag gctcagaaag agatcgcggg acttcgacca ttcgatgagc cagttcggga
      541 cgggaatccg tggcccctcg gggcgaaatc gcatgacgat gacgtgaccc gcgggtggga
      601 taaaggcatc gatgttcgtg ctgatttcaa ttctcggcac gtagaacgcc cccaaagtgg
      661 acgtgataat taggcgccgt ccttgcgcga tcgaaccttg gcattctgtc gaaatcgtcg
      721 gtcggagagg agccccacat cgcgctgagc gctcgtggac cggacccgga ccaaggatga
      781 cattccgtga tgcgagtccg ccaatccaca cgacgaaact gcttataccc gggctccgga
      841 tgaggacccc tgccgattcc gatgccgacc gtacgacaca tgaagacaaa gctcgccctc
      901 ttgggagagg gcggcgtcgg gaagacctcg ttgattcgac ggttcgtcct caacgagtac
      961 caggacacgt atctccacac ggtggggact cgggtcagca aggtcgagct gaccgtcccg
     1021 catggcgcgg acaccgaggt ccagatggac atgtccatct tcgacatcat gggccagcgc
     1081 gggttcaaag atctcgtccg ggagacgtac taccatggcg cgcaaggtct gatgggggtg
     1141 tgcgatctca cgcggaagga cagcctctac gccctcaacg aatggattcc ctccgcgctc
     1201 gaaatcgcag gcgacgtgcc ggtgtacctc atcgtgaaca agcgggacct cgacgaacgg
     1261 cgggcgatct cggaggatga ggtgcggcat gtcggagaag cgttcgccgc cccgatcgtc
     1321 tacacatcgg cgcggaccgg ggccctcgtc gacgacgcct tcaacgcctt ggcgatcgag
     1381 atggtcgacc gagcgttccg gcaggaagcg gcccgagccg tggaacgggg cctccgggac
     1441 aaggtcctgt tgctcctgga caaacgcggt tcaatcgggc tgaagaagag ccagttcttc
     1501 gagattctcc gtggtgtgaa cctcgacgat ctccagagcg agctcggccg cctcgagggc
     1561 gaaggcctcg tgaccctgct gtggcacggc gcctccgact tcaccgcggt gatcacccca
     1621 cgtgggaccg cggcgaccaa gcgagagtcg gcctgggacg aggaatgagt tcctcgacgg
     1681 ggtgaggcga cgaagaaggt ccgactcgag aagatcctgg agtccctgga cccgctgccc
     1741 catccggcgg cagacgccga gcaatatccg acgcccgccg gcatcgccgc cgaggtcgcg
     1801 tatctcgcct cggcgcgagg tgacgtcgaa agccggtcgg cggcggacct cgggtgcggg
     1861 aacggcgtgc tcgcgatcgc cgcgaagctt ctcggcgccg gtcgggtgat gggtttggac
     1921 tcggatccga cggctgtcga aatcgcacgc cggaacgcgg aacgcgcgcg cgtcgacgtc
     1981 gagtggcgcc tcgcggatgt ccgatccatc ggcgaccgct tcgagacgat cttcatgaat
     2041 ccgcccttcg gctctcaacg tcggcatgcg gaccgcccgt tcttcgatgc cgcgctggag
     2101 tggggccatg tcgtctacgc gttcttgaac gcgaaggcgg aagcgtacgt gcgtcggcgc
     2161 atcgagtccg gttccgggaa gattaccgac cggctgccct acgcctttcc gattcctcac
     2221 agcttcgact tccaccgcga ggaggttcgg cggattgacg tcgtcctcta ccgattcgaa
     2281 cctgcgaagg gataaatacc gacgggccta ctccgtccgg cccgaaggag tcgttgcacc
     2341 gaatggaagc gaagatggtc ctccccggcg acgagattgc ggtcgcggag gaattcgagc
     2401 ccggcgaggg gacgtacgag cggaacggac tcgtctttgc ggcgacgccc ggtgttctca
     2461 tcctcgaccc ggagaaccgc gtcgcgcggg tacgggcatt c
//
LOCUS       DATLMA010000539         1616 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_293959, whole genome shotgun sequence.
ACCESSION   DATLMA010000539 DATLMA010000000
VERSION     DATLMA010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293959"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..841
                     /locus_tag="VNA10_06940"
     CDS             <1..841
                     /locus_tag="VNA10_06940"
                     /inference="COORDINATES: protein motif:HMM:NF020933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA double-strand break repair nuclease NurA"
                     /protein_id="HVG37453.1"
                     /translation="SVGLLRYAFDGTAFRRKDWRLVQRMVGVSTFAEFVATQDELHRS
                     LFEFTKDRREEQPRDMVNEYRRLIEGQTAINFADDLEGCIVAVDGTLSEFPKQFSVME
                     RLVEVCEKRGHLLVGISKDSQLHAFGHVLTDEELMARCQDRLPPDALAYARAPKAAEA
                     EKEGLLYGDIYYARLHPRARKWFRVDLGTFRDRPDEAFGQLSAYGKSLVSVGYPWPLI
                     EAHRMAVTVRQLKPVYQESVMKMALRMGLDVRTILDGLTQVEGRKRSAFHEYLDKVAR
                     DLR"
     gene            838..>1616
                     /locus_tag="VNA10_06945"
     CDS             838..>1616
                     /locus_tag="VNA10_06945"
                     /inference="COORDINATES: protein motif:HMM:NF014044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HVG37454.1"
                     /translation="MKIGEIVAASVIDGLIAKLQLGNPEELKIAFPVIVEGARYDFYC
                     LVEDVLNEESDIADQLAGSTIADVIVPRPETHEGYGGPIFYSKAKLRMIQLVDRETKK
                     LSEPQTIPPYFSACRHATRDDVERIYEVTDTSATLGTITGVEPFHVQLDMKKLVEKPF
                     AIFGRTGTGKSILNKLVCAGILSKDVGSVLIFDMHSEYGVFSATDKTEGLKFFFPGKV
                     EIFSLDPKNREAKPFVLDTGEITPEDLIVALQDLTAPMVDTL"
BASE COUNT          311 a          509 c          531 g          265 t
ORIGIN      
        1 ctccgtgggc ctgttgcgct atgccttcga cgggacggcc ttccgaagga aggactggcg
       61 gctcgtgcag cgcatggtcg gggtgtcgac gttcgcggag ttcgtcgcga cccaggacga
      121 actccaccgg tccctcttcg agtttacgaa agaccggcgc gaggaacagc cgcgggacat
      181 ggtgaacgaa taccgccggc taatcgaagg ccagaccgcc atcaacttcg cggacgacct
      241 cgaggggtgc atcgtcgcgg tcgatggcac gctttcggaa ttcccgaagc agttctccgt
      301 gatggaacga ctcgtcgagg tgtgcgagaa gcgcgggcac ctgctcgtcg ggatctcgaa
      361 ggacagccag ctccacgcgt tcgggcacgt cctgacggac gaggagctga tggcccggtg
      421 ccaggaccgg ctgcctcccg acgccctcgc gtatgcccgg gccccgaagg ccgcggaggc
      481 cgagaaagag ggtctcctgt acggcgatat ctattatgcc cgattgcatc cacgggcgag
      541 gaagtggttc cgggtggatc tcgggacgtt ccgcgaccgg ccggacgagg cgttcggcca
      601 actctcggcg tacggcaaga gcctcgtttc cgtcggatat ccgtggcccc tcatcgaggc
      661 gcaccgcatg gccgtcacgg tccggcagct caagcccgtg taccaggaga gtgtgatgaa
      721 gatggcgctc cggatggggc tcgacgtgcg cacaatcctc gacgggctca cacaggtcga
      781 ggggcggaag cggagcgcgt tccacgagta cctcgacaag gtcgcgaggg acctgcgatg
      841 aagatcggcg agatcgtcgc cgcttccgtg atcgacggcc tcatcgcgaa gctccagctc
      901 gggaaccccg aggaactgaa gatcgcgttc ccggtcatcg tcgagggcgc acggtacgac
      961 ttctattgcc tcgtggagga cgtcctgaac gaagagagcg acatcgcaga ccagctggcc
     1021 ggctcgacga tcgcggacgt catcgtgccg cgaccggaga cgcacgaggg atacggcggc
     1081 ccgatcttct acagcaaggc gaagctacgg atgatccagc tcgtggaccg ggagacgaag
     1141 aagctcagcg agccccagac gatcccgccg tacttctccg cgtgccgaca tgcgacgcgg
     1201 gacgacgtgg aacggatcta cgaagtcacg gacacttcgg cgacgctcgg gacgatcacc
     1261 ggcgtcgagc cgttccacgt tcagctcgac atgaagaagc tcgtcgagaa gccgttcgcg
     1321 atcttcggtc ggaccggcac cggcaagtcg atcctgaaca agctcgtctg cgccggcatc
     1381 ctctccaagg acgtcggatc tgtcctgatt ttcgacatgc acagcgagta cggcgtgttc
     1441 agcgcgaccg acaagacgga gggcctgaag ttcttcttcc ccgggaaggt cgagatcttc
     1501 tcccttgacc cgaagaaccg cgaggcgaag ccgttcgtcc tcgacaccgg cgagatcacg
     1561 ccggaggacc tcatcgtcgc cttgcaggac ctcaccgcgc cgatggtcga cacgct
//
LOCUS       DATLMA010000540         1529 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_778692, whole genome shotgun sequence.
ACCESSION   DATLMA010000540 DATLMA010000000
VERSION     DATLMA010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778692"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1093
                     /gene="argS"
                     /locus_tag="VNA10_06950"
     CDS             <1..1093
                     /gene="argS"
                     /locus_tag="VNA10_06950"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HVG37455.1"
                     /translation="NEALKHEIEQLTQRFEGGDVQLTKDIRKVGEAVLGGILGTLRRV
                     NVTYDSFFWESDAILDGSVQRIVERLMPLSKEEDGAHYLDLSAFGLEGDAAKYVFVRR
                     DGTSLYTTRDIAYHLDKMGRCDVAVDIVGEDHKLSFQRLKAAFQLMGIDWAPETIFYA
                     FVNLPEGRMSTRKGRVVYLDDLIDEAIDRAYAEVTKRREDLPEAKKREIAETIGVAAV
                     RYNMVRVQSEKAITFRWEEALSLEGNSAPFLQYAHARACSILGKVGVHGPADLRLLVH
                     PQEQMLIRWIAKFPSTVRESAEGRRVHAVAAYAADFASQFNLFYRDCPVLTAEPADLR
                     SARVDLVDGARVVLRNALDGLGLGAPREM"
     gene            complement(1128..>1529)
                     /locus_tag="VNA10_06955"
     CDS             complement(1128..>1529)
                     /locus_tag="VNA10_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37456.1"
                     /translation="LSSSAQWFDKNGNPTSNHTIAPGDTVKLVFTVRLSGQGNKTIQV
                     YVYDATEPYTWRTPENRASLPVNVRQPAWQPYAIYGSVIGVIVLFVFGMYARRKIKAG
                     EWRPIRGRRREKGGGEEKRPRKEVKEEKKRL"
BASE COUNT          266 a          504 c          495 g          264 t
ORIGIN      
        1 caacgaggcg ctcaagcacg agatcgagca actcacgcag cgcttcgagg gcggcgacgt
       61 ccagctcacg aaagacatcc ggaaggtcgg tgaggccgtc ctcggcggca tcctaggaac
      121 cctgcgccgc gtgaatgtga cctacgactc gttcttctgg gagagcgacg cgatcctcga
      181 cgggagcgtc cagcggatcg tcgagcgcct catgcccctc agcaaggagg aggacggcgc
      241 gcactacctc gacttgtccg cgttcggcct cgagggagac gccgcgaaat acgttttcgt
      301 gcgacgcgac gggacgtccc tgtacacgac ccgggacatc gcgtaccacc tggacaagat
      361 gggtcggtgc gacgtcgcgg tcgacatcgt cggagaagac cacaagctct ccttccaacg
      421 gttgaaggcc gccttccagc tgatgggcat cgactgggcg ccggagacga tcttctacgc
      481 gttcgtgaac ctgccggagg gccgcatgtc gacgcgcaaa gggcgcgtcg tctacctcga
      541 cgacctgatc gacgaagcga tcgaccgcgc gtacgcggaa gtcacgaagc ggcgcgagga
      601 cctgccggag gcgaagaaac gcgagatcgc cgagacgatc ggcgtggcgg cagtccgata
      661 caacatggtc cgcgtgcagt ccgagaaggc gatcaccttc cgctgggagg aggcgctgag
      721 tctcgagggc aactccgccc cgttcctcca gtatgcccat gcgcgggcgt gcagtatcct
      781 cgggaaagtc ggcgtgcatg gccccgcgga tctccgtctt ctcgtccacc cgcaggaaca
      841 gatgctcatt cgctggatcg ccaagttccc gtccacggtc cgagagtccg ctgagggccg
      901 tcgcgtacac gcggtcgccg cgtacgcagc ggacttcgcg tcccagttca acctcttcta
      961 tcgggactgc ccggtcctca ccgccgagcc cgcggatctc cgaagtgcgc gcgtcgacct
     1021 cgtcgacggg gcccgggtcg tgcttcgcaa cgcgctggac ggcctgggac tcggtgctcc
     1081 gagggagatg tgagaacgct cgcggaccag gggaacgggg atagcgccta gaggcgcttc
     1141 ttctcttcct tgacttcctt cctgggccgc ttctcctctc ccccgccttt ctcccgccgc
     1201 cggccgcgaa tcgggcgcca ctcgccggcc ttgatcttgc gccgtgcata catcccgaag
     1261 acgaacagga cgatgacgcc gatcacgctg ccgtagatcg catagggttg ccaagcgggc
     1321 tgacgaacgt tcacggggag cgacgcgcgg ttctccgggg tccgccaggt gtacggctcc
     1381 gtcgcgtcgt agacatacac ctggatcgtc ttgtttccct ggccgctgag gcgcacggtg
     1441 aacacgagct tgaccgtatc gcccggggca atggtgtggt tcgacgtcgg attgccgttc
     1501 ttgtcgaacc actgggcgct gctcgacaa
//
LOCUS       DATLMA010000541         2952 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_51930, whole genome shotgun sequence.
ACCESSION   DATLMA010000541 DATLMA010000000
VERSION     DATLMA010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51930"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VNA10_06960"
     CDS             <1..461
                     /locus_tag="VNA10_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37457.1"
                     /translation="LARALCVGPRILLLDEAFGSLDATMRTQVVQEVRSIIRRQKVTT
                     LFITHDQEEAFMFARRMIVLNDGRVVGSGSPESMMTNTDPFIQDFMKMVLFAEATVQM
                     TPGGSPYITLDGGAQIPVHIPDVRGGETVHVMVKKGADAERIEVWSGDAK"
     gene            451..1419
                     /locus_tag="VNA10_06965"
     CDS             451..1419
                     /locus_tag="VNA10_06965"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HVG37458.1"
                     /translation="MRNKAFAIAALVLSVGFALSLTDLYKVQQRTLVVYTTPALQSLL
                     ESLVVPRFQAETGVDVTLVYVSAGEQYTRLRMSGGHPEADLFLHASPLFLEKGSSDGL
                     LLPFQITRNASVPPNFQRAPVWYAFAWSPLVEVYNPALPALPDLAFINTTFGFPHPLL
                     SNNGIYSVMFFENVSTAAGARALAHTVVQPVNARSNILGVVDGAFQVTLGYEGVTLFY
                     KNQSAPVKFDLPLLRGQRYLTPVVFSAGLVKGHPNPSALDFIDFLFRDEIQSKVSVFY
                     FRAVIPGFSDPAGGIPLPSPGVINLNYDWSQWSTLESALPKYVVGG"
     gene            1450..2301
                     /locus_tag="VNA10_06970"
     CDS             1450..2301
                     /locus_tag="VNA10_06970"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HVG37459.1"
                     /translation="MAIWPFRRATLERTIWTVIVWFLFGLFVLGPLATVFAFSFTSSV
                     LSGRGTFTLTWYAQLFSQPGLYGPLIRSFEIAVIVVVFQLMFGTIIAYSTVREKVFGA
                     RTLDTLSNITIAVPSVVVGLALLSFYGPFGPFAAIAEFLFGNPLSLTWTLWILVFAHV
                     IETFPYMVRSMAAVLVKLDTHLESAARSLGANRLHVFLTITLPQLKPGLVAGSVLVLS
                     RSIAEFGATIIVVSAVLKTAPIAIFIQAEAGSLELASAYSVVLMVVSFVAYLLMSRWL
                     LRGESIA"
     gene            complement(2312..2770)
                     /locus_tag="VNA10_06975"
     CDS             complement(2312..2770)
                     /locus_tag="VNA10_06975"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HVG37460.1"
                     /translation="MDKKVKKKVLQQIPYGAYIVGTQTEDGKDWLMFGTWLMQTSFKP
                     TLVAFAFRKDSRTLANVRRSKSFAVSFIREGTQDVAELVLDGAFEKVKTERTASGLPV
                     LTDGAGWIECQVIEELPQGDHPILLAEVSDVGPGKGKPIFLESLGWHYGG"
BASE COUNT          474 a          987 c          868 g          623 t
ORIGIN      
        1 ccctcgcccg cgccctctgc gtcgggccgc ggatcctgct cctcgacgaa gcgttcggct
       61 cgctcgacgc gacgatgcga acccaggtgg tccaggaagt gcggtcgatc atccgacggc
      121 agaaggtgac gacgctgttc atcacccacg accaagaaga ggcgttcatg ttcgcgcggc
      181 gaatgatcgt cctgaacgac ggacgggtgg tgggctcggg gtccccggag agcatgatga
      241 cgaacaccga cccgttcatc caggacttca tgaaaatggt cctcttcgcg gaggcgaccg
      301 tccagatgac ccccggcggg tccccgtaca tcaccctcga cggcggcgcg cagatccccg
      361 tgcacatccc cgacgtgcgg gggggcgaga ccgttcacgt gatggtgaag aaaggcgcgg
      421 acgccgagcg gatcgaggtg tggtccggcg atgcgaaata aggccttcgc gatcgccgcc
      481 ctcgtcctgt ccgtgggctt cgccctgtct ctaacggact tgtacaaggt ccagcaaagg
      541 acgctcgtcg tgtacacgac ccccgccctt cagagtctcc ttgaatcgct ggtcgttcct
      601 cggttccaag cggagacagg cgtcgacgtc acgctcgtgt acgtgagcgc gggcgagcag
      661 tacacccggc ttcggatgtc ggggggccat cccgaggcgg atctcttctt gcacgcttct
      721 ccccttttcc tcgagaaagg ctcctcagac ggcttactcc tgccgttcca gatcacccgg
      781 aacgcgtccg tccccccgaa cttccagagg gcgccggtgt ggtacgcatt cgcatggagt
      841 ccactcgtcg aggtgtacaa ccccgcgctc cctgcgcttc cggacctcgc tttcatcaac
      901 acgaccttcg gatttccgca cccgctccta agcaacaacg gcatttactc tgtgatgttc
      961 ttcgagaatg tctccaccgc cgcgggcgcc cgagcgctcg cgcatacggt ggtgcaaccg
     1021 gtcaacgcac gatcgaacat tctcggcgtc gtcgatggag ccttccaggt gacgctgggc
     1081 tacgagggcg tgacgttgtt ctacaagaat cagagcgcgc ccgtcaagtt cgacctcccg
     1141 ctcctccgcg ggcaacggta cctgaccccg gtcgtcttct cggccgggct cgtcaagggc
     1201 catccgaacc cgagcgcctt ggacttcatc gatttccttt tccgggatga gatccagtca
     1261 aaagtcagtg tgttctactt ccgcgccgtc atccccggat tctccgaccc cgcgggtggc
     1321 attccgctcc cttcaccggg agtgatcaac ttgaactacg actggtccca gtggtcgact
     1381 ctggaatccg ctttgccgaa gtatgtcgtc gggggatgat cgcgattttc gagcggagcg
     1441 gatagaccca tggcgatttg gcccttccga cgtgcgaccc tcgagaggac catctggacg
     1501 gtcatcgtat ggtttctgtt cggcctcttc gtcctgggac ctttggcaac ggtcttcgcc
     1561 ttcagcttca cctcgtcggt cctcagcggg cgcggaacgt tcacgctgac gtggtacgcc
     1621 caactgttct cccagcccgg gctgtacggg cccctcatcc ggagtttcga gatcgcggtc
     1681 atcgtcgtcg tcttccagtt gatgttcggc acgatcatcg cctactcgac ggtccgggag
     1741 aaggtgttcg gcgcgcggac gctcgatacg ctcagcaaca tcacgatcgc cgtgccgagc
     1801 gtggtcgtcg gcctcgcgct cctgtcgttc tacggaccct tcggcccctt cgcggcgatc
     1861 gcggagttcc tcttcgggaa cccgctatcc ctcacttgga ccctgtggat cctcgtcttc
     1921 gcgcatgtga tcgagacatt tccgtacatg gtccgctcca tggcggcggt gctggtcaag
     1981 ttggacacgc atctcgagag cgccgcgcgg agccttggag cgaaccgctt gcacgtcttc
     2041 ctcacgatca cgttgcccca actgaaaccg ggcctcgtcg ctgggtcggt cctcgtcctc
     2101 tcccggagca tcgcggagtt cggggccacg atcatcgtcg tctccgcggt gttgaagacc
     2161 gccccgatcg cgattttcat ccaggccgag gccggctccc tcgaactcgc gtccgcgtac
     2221 tccgtcgtgc tgatggtcgt gtcgttcgtc gcgtacctgt tgatgagtcg ctggcttctc
     2281 cgcggcgagt cgatcgcgta gccggggccg ttcagccccc gtaatgccag ccgaggctct
     2341 ccaagaagat cggcttcccc ttgcctggac cgacgtcgga gacctcggcg aggaggatcg
     2401 gatggtcgcc ttgcgggagc tcctctatca cctgacattc gatccagccc gcgccatccg
     2461 tgagcaccgg gaggccggac gcggtgcgct cggtcttcac cttctcgaaa gccccatcga
     2521 gcaccagctc ggcgacgtcc tgcgtgccct ctcggatgaa cgagaccgcg aacgatttcg
     2581 atcgtcggac attcgccaga gtccggctat ctttgcggaa cgcgaacgcg accagtgtgg
     2641 gcttgaagga cgtctgcatc agccacgtgc cgaacatcag ccagtccttt ccatcctcgg
     2701 tctgcgtgcc gacgatgtac gcgccgtatg gaatttgctg gaggaccttc ttcttcactt
     2761 tcttgtccat cgtcccaccg ggtcgccgaa cgactcggtg gctaatcaag tcatgcgcat
     2821 aagctgcgtc ggccgtccat ccgttcagat cgattcgtcg acacggttga gcacttgcat
     2881 cgccttcagg gtgatgagcc tgctcgcctc cccgggtttc tccaggccaa acggcgtcgg
     2941 cgcatgtttc gg
//
LOCUS       DATLMA010000542         1774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_656174, whole genome shotgun sequence.
ACCESSION   DATLMA010000542 DATLMA010000000
VERSION     DATLMA010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656174"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VNA10_06980"
     CDS             complement(<1..262)
                     /locus_tag="VNA10_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37461.1"
                     /translation="MPRGKSQEMSAHARLVVGSTLFLVVLTAVALTASASLYHFYDGV
                     SDPPPTFPSTGRAVAISSAQWAAQSFRASASYVLTRVSLWAQY"
     gene            565..>1774
                     /locus_tag="VNA10_06985"
     CDS             565..>1774
                     /locus_tag="VNA10_06985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37462.1"
                     /translation="MEVPPGRVERIADGGPEAIRSILAELRAMKFNGVLKTSVFRGDT
                     PSQGVLVLRRGDGVLAEHRSDVDVAGHEAVPEILKDAASAKAQLEVRTYDYGHSSISI
                     DHLQRSYPEAAVEGIGDPDEVLEQAIAQEVRERETYEKQLEARRDQERTLVEREEELY
                     RRKWELEQEYQRSGMRQRELDSLRAELQTVKQASGLILSRLEERRATQDVEVESRKKV
                     LAMEAEKARSEVEAQRRSLSERQAKLGGLEREFASKEATYRDRETSLDARATSLERER
                     KQMNDLYGNLQAEAVKISEARKVFEERLQEAERRERLLTAQEAAIRDRETKLREHVAS
                     VTKREQTIEEREKSLPRRVAELESRETEIAEKTTKVGKQAEAFETQDAGLDDRREELE
                     RATKRMEKLAK"
BASE COUNT          390 a          542 c          612 g          230 t
ORIGIN      
        1 aatactgtgc ccataacgaa acgcgcgtca ggacgtagga ggcgctcgcc cgaaacgatt
       61 gagcggccca ctgagcgctg ctgatcgcca ccgcccttcc ggtcgacggg aacgtcggcg
      121 gggggtcgga aacgccatcg tagaagtggt acagggaggc tgacgccgtc aaggctaccg
      181 cggtgagtac gacgaggaag agggtggacc cgacgacgag cctcgcgtga gccgacattt
      241 cctgggactt gcctcgcggc accggaatag ttctcgcggt gtgtcgggtt cgtcgcatgt
      301 atgccaccac agcccatctc tgcggcgaag gtccgcgaat tcgtttctat gacaggaagg
      361 accaataacc gtaccggtcc gattatcact tgggggccgg cctcatcgca gaggaaatca
      421 gcggccccgc gcgacaccgg cctcaggcgc gggcaagccg gcccatcgga gcacgcgcta
      481 cgacgcccgc gattccgcct gggggtttca aggccgcgaa cctcagggga aggttcttta
      541 ctctgacaat tacctgacac gagcatggaa gtccctcccg ggcgagtgga acggatcgcc
      601 gacggggggc ccgaagcgat tcggtcgatc ctcgccgagc ttcgggcgat gaagttcaac
      661 ggtgtcctga agacctcggt ctttcgaggc gacacgccgt cgcaaggggt ccttgtcctg
      721 cgccgaggag acggggtcct cgccgagcac cgatcggacg tcgacgtggc cggccacgag
      781 gccgtcccgg agatcctgaa ggacgccgcg agcgcgaagg cccagctcga ggtccgcacg
      841 tacgactacg gccattcctc gatcagcatc gaccatctcc agcggagcta cccggaggcc
      901 gcggtcgagg gcatcggtga cccggacgag gtactggagc aggcgatcgc ccaggaggtc
      961 cgcgagcgcg agacgtacga gaagcaactc gaggcccgtc gggatcaaga acggacgctc
     1021 gtcgagcgcg aagaggaact ctaccgccgg aaatgggaac tcgagcagga gtaccagcgg
     1081 agcgggatgc gacagcgcga gctcgactcc ctccgggccg aacttcagac cgtcaagcag
     1141 gcgagtggcc tgatcctcag ccgactcgag gaacgccggg cgacccagga cgtcgaggtc
     1201 gagtcccgga agaaggtcct cgcgatggaa gccgagaagg cccggtcgga ggtcgaagcg
     1261 cagcgacgca gcctgtcgga acggcaagcg aaactcggcg gtctggagcg ggaattcgcg
     1321 tcgaaggaag ctacctatcg ggaccgcgaa acgtcgctcg atgcgcgggc cacatccctc
     1381 gaacgggaac ggaagcagat gaacgacctg tacgggaacc tgcaggccga ggccgtgaag
     1441 atctccgagg cccggaaggt gttcgaggaa cgactccagg aggcggaacg acgcgaacgg
     1501 cttctcaccg cccaagaggc ggccatccgg gaccgcgaga cgaagctccg cgagcatgtg
     1561 gcctcggtca cgaagcgaga gcagaccatc gaagaacgcg aaaaatcgct tccccggcgg
     1621 gtggcggagc tcgaatcgcg cgagacggag atcgccgaga agaccacaaa ggtcggcaag
     1681 caggccgaag ccttcgaaac gcaggacgca ggcctcgacg accggcgcga ggaactcgaa
     1741 cgggcgacaa aacggatgga aaagctcgcg aagg
//
LOCUS       DATLMA010000543         1725 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_656254, whole genome shotgun sequence.
ACCESSION   DATLMA010000543 DATLMA010000000
VERSION     DATLMA010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656254"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..1585
                     /locus_tag="VNA10_06990"
     CDS             293..1585
                     /locus_tag="VNA10_06990"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012996213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HVG37463.1"
                     /translation="MPATVVVGAQFGDEGKGKIVDYLADRADVVVRFQGGANAGHTVQ
                     VGDQLYAFHLLPSGVLRKRTMNVIGNGVVVDPAQLLKEIEETRALGHSVENLRISDRA
                     HVVMSYHRIIDGLEEKLKGNLGAGTTLRGIGPSFEDKVGRFGIRMCDLVDPLALREKL
                     ETIVPIKQRLIEAYGGTERLDLEGLYKEQVEYGARLAPFVADTSVWLDGAIRRRKRVL
                     FEGAQGTHLCIDHGIYPFGTSSDCVAGAASVGAGIGPQFLTDIIGVAKAFTSRVGTGP
                     FPTEVEGDTAEYLRERGGGEYGTTTRRPRRVGWLDLVMLRMTVRVNGLVSLAVTKLDV
                     LGGLDRIPMCVSYRADGETIKEFPASMRVLSRCEPVYREFKGWADLTESQWIATAKKG
                     KRALPETVRKYLGFIETQLNVPVRIISVGRPRAATIGH"
BASE COUNT          325 a          536 c          578 g          286 t
ORIGIN      
        1 tccggcgacg agcacaatgt gtccccgcgg gatgccgccg ctcagacgat catccaggcc
       61 aacgacatac gtaggaatct tgtctgtcgc ctgcgacagg atggaacccc ctcccgaccc
      121 gaccggcggt accgggcaaa ggcccccagc cgataaaacg ttatcgcgcg aggtctacgg
      181 gccaccatac cggaatggtg tcgggggcag tcgcaacccc tcaccgggag aagaccgtcc
      241 cgcggtccca cagaaccatt aaacgtgagg cgatgttcag gcggcgattc ggatgcccgc
      301 gacggttgtg gtcggcgccc aattcgggga cgaaggcaag gggaagatcg tcgactacct
      361 tgccgaccgc gcggacgtcg tcgtgcggtt ccagggcggc gcgaatgcgg ggcacacggt
      421 ccaggtgggc gaccagttgt acgcgttcca tctgctgcct tcgggcgtcc tccgaaagcg
      481 cacgatgaac gtgatcggga acggagtggt cgtcgatccg gcgcagctcc tgaaggagat
      541 cgaagagacg cgtgctctcg gccactcggt cgagaacctg cgcatcagcg accgcgcgca
      601 cgtcgtgatg tcgtaccaca ggatcatcga tggcctcgaa gagaaactga aaggcaacct
      661 gggggccggt acgacgcttc gggggatcgg cccctccttc gaggacaagg tgggccgatt
      721 tgggatccgc atgtgcgacc tcgtcgatcc cctcgccctc cgagagaagc tcgagacgat
      781 cgtcccgatc aagcagcggc tcatcgaggc ctacgggggg acggaacgcc tcgacctgga
      841 aggactctac aaagagcagg tcgagtatgg tgcgcgtctc gcgccgttcg tcgcggacac
      901 gtccgtatgg ctcgacgggg cgatccggcg tcggaagcgg gtcctgttcg agggcgccca
      961 gggcacgcac ctctgcatcg accacgggat ctatccgttc ggcacgtcga gcgattgcgt
     1021 cgccggagcg gcctccgtcg gcgcggggat cggaccccag ttcttgacgg acatcatcgg
     1081 cgtcgcgaag gccttcactt cgcgcgtcgg caccggaccg tttcccacgg aggtcgaagg
     1141 ggacaccgcg gaatacctgc gcgaacgggg cggaggcgaa tacggcacga cgacccgccg
     1201 gccacggcgc gtcggttggc tcgatctcgt gatgctccgg atgaccgtgc gcgtgaacgg
     1261 tcttgtgagc ctggcggtga cgaaactcga tgtgctcggc ggactcgacc gaatcccgat
     1321 gtgcgtgagc tatcgggccg atggagagac gatcaaggaa ttccccgcga gcatgcgcgt
     1381 gttgtcgcgg tgcgaaccgg tctaccgcga gttcaaaggc tgggcggatc tcaccgaatc
     1441 ccagtggatc gccaccgcga agaaagggaa gcgagcactt ccggagacag tgcggaagta
     1501 tctcggcttc atcgagacgc agctcaatgt gcctgttcga atcatctcgg ttggacgtcc
     1561 tcgcgccgcg acgattggcc actgaaagcg ttcaactggt cgattcgaga gcccgggtgg
     1621 tttccaaccg agcgatgcgc tctcggagct cacacgcctt gcagatctcg ttcacggtcg
     1681 gctccccgca tcgcgcgcac gcattgaggg ccgcgggcgg atact
//
LOCUS       DATLMA010000544         5820 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_52658, whole genome shotgun sequence.
ACCESSION   DATLMA010000544 DATLMA010000000
VERSION     DATLMA010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 5820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5820
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52658"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VNA10_06995"
     CDS             complement(<1..314)
                     /locus_tag="VNA10_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HVG37464.1"
                     /translation="MVLEKLGGSLREALRKIAGASYVDESLIKEIVRDIQRALIQADV
                     NVQLALGITKQLQRRALEDKPPPGMSPREHVVRIIYEELVKILGATREVPLQKQRILL
                     VGL"
     gene            complement(674..1537)
                     /locus_tag="VNA10_07000"
     CDS             complement(674..1537)
                     /locus_tag="VNA10_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HVG37465.1"
                     /translation="MLDELQLKRERENQEAERHRRRRDELNDKTREWVEKRDALNAQV
                     RALVDEATQHRIQRDELNAQVKAAKEERDRYNRRVNELQDQLTELKRRKLPRGAVPLG
                     KLQQELKRLEFRQMTSVLTVDKERALIDEIQRLQAEVRKLEKSLEENEDVRKMRDELK
                     SARDLAEDAHKRVSELAEKAQGEHDQMTALYEQGDNLRREADRAQEEFIKTKMLADEE
                     HRKHIEHIRQVHDYDKIIHGIWMKSRGVTEEVAEEVDAKREAELIFERFKKGEKLSTE
                     DLLTLQKSGYL"
     gene            1689..3086
                     /locus_tag="VNA10_07005"
     CDS             1689..3086
                     /locus_tag="VNA10_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37466.1"
                     /translation="MSRLAFVGFLILLALAVDTAAPVLAERGPSPSPAATTYTLALAE
                     DRRSAERNETITYGIWVNVSGGGSLPLVRVNFTLDSDLTLVGAAIILPSSCATSTSNA
                     TFAEWQCSFLRSGRSYRFTVPALVDGNATRGRSRLATAQAIELGAGAATPRIARVAVW
                     ILIGVLELQVTALPSAAPLPGSQIYFNVNVTNIIRTDVDPADVQNLTAYNVRITIGIG
                     PFLDVGMATPRLIVLSYLTPSENVNVNFTGIVSPTNATVGDPISVNATVLYEDVANRS
                     IGPKFAEWVYDVQAPPPLRSDLTSVLAVLSFALLAVVAAILIAPILGERSLVIDEVFL
                     VHRSGVLIQHLRGRSAPDLRKDDDLVASMFVAIQDFVRDSFHTKATLDELSFAGRKAA
                     VLRGRYLVLAALVSRGNPRYLFPQMKAVERALQRAHGAALVDWDGRVTSLDQAGPLLE
                     SFLAGGFRRMHGWRR"
     gene            3177..3395
                     /locus_tag="VNA10_07010"
     CDS             3177..3395
                     /locus_tag="VNA10_07010"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG37467.1"
                     /translation="MANADDVDALFVLAALRAQEGYLEEGLTILDRVLRIDPRYPGAW
                     RFKAKLHRMQGEPAAEQSARRHAEEIER"
     gene            3398..3943
                     /locus_tag="VNA10_07015"
     CDS             3398..3943
                     /locus_tag="VNA10_07015"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HVG37468.1"
                     /translation="MPLEVVKLKICMAGEGAVGKTSLIRRYVLDQYDDRYIATLGTKI
                     TKKTLTVTNPAGSEPLQADVILWDIMGTSTVRELLKEAYYHGAQGILAVADLTRRDTL
                     VALDEWARSIRSVAGDIPTYGVVNKADLEKERALPAAEVEAFFKRRGWPWSYTSAKTG
                     AGVLETFVGIVKHVLGSRGVT"
     gene            complement(3940..5217)
                     /gene="glyA"
                     /locus_tag="VNA10_07020"
     CDS             complement(3940..5217)
                     /gene="glyA"
                     /locus_tag="VNA10_07020"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HVG37469.1"
                     /translation="MNEDVAFIEDQVDRHHAWFARCLPMIASENIISPMAREMLLTDF
                     GDRYAEGLPHERYYQGNTFVDEVEDRVVALAKKIFRVRHADPRLTSGTVANMAVYFAL
                     LEPGDIMTSVALSHGAHISSAKFGAAGMRGVNNVNYPFDVDRMNIDVDGTATLIKLVK
                     PKVAAFGQSVFLFPTPLADLRDAFQEAGCSVWYDGAHVLGLIAGGQFQDPLHEGADVL
                     TGSTHKTLPGPQHGILLSDSDDEKFIKRLQRAVFPGVVSNHHLHAMAALGITLAEFVE
                     FGREYAAQIVRNSKALAQALHERGIKVLAEKHGFTESHTVALDVAALGGGAKLSADLE
                     KANIITNKNLLPWDTSPVKPSGVRLGTQELTRLGMRESQMDEVADLFARVAVKHEPSE
                     KVAADVGAMRTEFNTVHYCFTKGAEAHRRWRIA"
     gene            complement(5267..>5820)
                     /locus_tag="VNA10_07025"
     CDS             complement(5267..>5820)
                     /locus_tag="VNA10_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008082938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HVG37470.1"
                     /translation="KYVPDKDHYRSVVEELRERLLDNAVKFTDRTVKVDINTGDNYDA
                     GIFYLTVTGLSWENGDDGSVGRGNRVSGLITPYRPMSMEAAAGKNPVTHVGKLYNLLS
                     FDIADRLVREHEGKVKEVWVRIVSQIGNPIDEPQAATAQIIPEKGTHLSSLQRDAEAL
                     IDEELEKIYKLTERIVDGKVHCF"
BASE COUNT          902 a         1913 c         1881 g         1124 t
ORIGIN      
        1 agcccgacga ggaggatccg ctgtttctgg agcggcacct cgcgggtggc ccccaggatc
       61 ttcacgagct cctcgtaaat gatccgtacg acgtgctcgc gcgggctcat gcctggcggc
      121 ggcttgtctt ctagcgcccg ccgctggagt tgcttcgtga tcccgagggc gagctggacg
      181 ttcacgtccg cctggatgag ggcccgctgg atgtcgcgga cgatctcttt gatgagggac
      241 tcgtcgacat agctggcgcc cgcgatcttg cggagcgcct cgcggaggga gccgccgagt
      301 ttttcgagga ccatcggacg tctcctaaga acggaggcac gttaagcttg gcggtgtgaa
      361 cggcgcatgc gcacacagtc attcgaagaa aaaagggaag ggagggctag ccttgtcaga
      421 agggatggga tgcactctaa cgaactagcc caaaattccc ccggaatcgt attcgggata
      481 agctacttaa cactttgtaa aatccgcgga agcggatggc agccgtggcc tgagcgggtt
      541 ccgggcctga caaaacctgt gcgagccggc ccgtcgccac cgactaatgt gctatactaa
      601 atatattcat gttccgagag ccaccgtatg gtgggcgccc ctagggatca acggcaccag
      661 gccggtcacc gggtcagagg tatccggact tctgcagcgt taggaggtcc tcggtcgaca
      721 gcttctcgcc tttcttgaac cgttcgaaga tgagttccgc ctctctcttc gcgtcgacct
      781 cttcggcgac ctcctcggtg acgccgcggc tcttcatcca gatcccgtgg atgatcttgt
      841 cgtagtcgtg gacctggcgg atgtgctcga tgtgcttccg gtgctcctcg tccgcgagca
      901 tcttcgtctt gatgaactcc tcttgcgccc ggtccgcctc gcggcgcagg ttgtccccct
      961 gttcgtacag ggcggtcatc tgatcgtgct ccccctgggc cttctccgcc aattcggaga
     1021 cgcgcttgtg ggcgtcctct gcgaggtccc tcgcggactt cagctcgtcc ctcatcttcc
     1081 ggacatcctc gttctcctcg agcgacttct cgagcttccg gacctccgcc tggagccgtt
     1141 ggatctcgtc gatcagcgcg cgctccttgt ccacggtcag gacggaggtc atctgtcgga
     1201 actcgaggcg cttgagctcc tgctggagct tgccgagcgg cacggcgccc cgagggagct
     1261 tccgccgttt cagctccgtg agttgatcct ggagttcgtt cacgcggcgg ttgtaccggt
     1321 cgcgttcttc tttcgcggcc ttgacctgcg cgttcagctc gtcccgttgg atccggtgtt
     1381 gcgtcgcctc gtcgacgagc gcgcggacct gggcgttcaa cgcgtcgcgc ttctcgaccc
     1441 attcgcgcgt cttgtcgttc agctcgtcgc ggcgccggcg gtggcgttcc gcctcctggt
     1501 tctctcgctc ccgctttagc tgcagctcat ccagcaccga aaccctctcg agaccggctg
     1561 gtgggaagtt gcgaagaaac cctcggctta taaaacttcc cgcgcacgtt ctcggaatcc
     1621 ggaaggagtc gatgcgataa cggtgtcgca aactcaaata gcgtcaggtt catagtaacc
     1681 ggggttccgt gagccgcctc gcgttcgtcg ggttcctcat cctcctcgca cttgccgtcg
     1741 acaccgcggc gcccgtgctc gcggaacgcg gtccgtcgcc gtctccggcc gccacgacct
     1801 acacgctcgc ccttgctgag gatcgtcggt cggccgaacg gaacgagacg atcacgtacg
     1861 gcatctgggt aaacgtctcg ggaggcggtt ccctcccgct cgtccgggtg aacttcaccc
     1921 tggattccga cctcacgttg gtcggcgcgg cgatcatcct tccgtcgtcg tgcgcgacga
     1981 gcacctccaa tgcgacgttc gcggagtggc aatgcagctt cctccgctcg ggtcgttcgt
     2041 accgcttcac cgtgccggcc ctcgtcgacg gaaacgcgac tcgaggccga tctcggctcg
     2101 cgaccgccca agccatcgag ctcggcgcgg gagccgccac gccccggatc gcccgggtgg
     2161 cggtctggat tctcatcggc gtcctcgagc tccaggtcac tgcgcttccc tccgccgcgc
     2221 cattgcccgg gagtcagatc tacttcaatg tgaacgtcac gaacatcatc cggaccgatg
     2281 tcgacccggc tgacgtccag aacttgacgg cgtacaacgt gcggatcacg atcggaatcg
     2341 gtcccttcct cgacgtcggg atggcgaccc cccggctgat cgtcctgagc tacctgacgc
     2401 ccagcgagaa cgtcaacgtg aacttcaccg gaatcgtgtc gccgacaaac gccacggtcg
     2461 gggacccgat ctccgtcaac gcgacggtcc tctacgagga cgtggcaaac cggtccatcg
     2521 gtccgaagtt cgcggagtgg gtctacgacg ttcaggcgcc acccccgctc cggagcgatt
     2581 tgacatcggt cctcgcggtc ctctctttcg ccctcctcgc tgtcgtggcg gcgatcctca
     2641 tcgcccccat cctcggcgaa cggagtctcg tgatcgacga ggtcttcctc gttcatcgga
     2701 gcggggtctt gatccagcac ctccggggga gatcggcgcc ggatttgcgg aaagacgacg
     2761 acctcgtcgc atcgatgttc gtcgcgatcc aggatttcgt ccgcgattcg ttccacacga
     2821 aggcgaccct cgacgaactg tcgttcgcgg gtcggaaggc cgcggtcctc cgaggccgct
     2881 atctcgtcct cgcggccctc gtctcgcgcg gcaacccgcg gtacctcttc ccgcagatga
     2941 aggcggtcga gcgagcgctg cagagggcgc atggggccgc gttggtcgat tgggacggtc
     3001 gggtcacgag cctcgaccag gccgggccgc tcctcgagtc gttcctcgcg ggagggttcc
     3061 gacggatgca cgggtggcgc cgatgaccct cggaccgtct gcggcggatg ggctccgggg
     3121 gtgctcccct gccgattgag cgtccggaca cggcatcgct ggtccgacag cgcctcatgg
     3181 cgaacgcgga cgatgtcgat gccctctttg tgctcgccgc cctacgggcc caggaagggt
     3241 acctggagga aggcttgacg atcctcgacc gcgtgctccg catcgacccg cggtaccccg
     3301 gcgcctggcg cttcaaggcg aagctgcacc gaatgcaagg ggaaccggcc gcggaacagt
     3361 ccgcgcgccg gcacgcggaa gaaattgaga gatgagtatg cccctcgaag tcgtcaaact
     3421 gaaaatctgc atggccgggg aaggcgcggt cggcaagacc tccctcatcc ggcgatacgt
     3481 actcgaccag tacgacgacc ggtacatcgc gaccctcggc acgaagatca cgaagaagac
     3541 cctgaccgtc acgaatccgg cgggctcgga accgctccag gccgacgtga tcctctggga
     3601 catcatgggc acgtcgacgg tccgggagtt gctcaaggag gcgtactacc acggtgcgca
     3661 ggggatcctc gcggtggcgg acctcacgcg acgcgacacg ctggtcgcgc tcgacgagtg
     3721 ggcgcggtcg atccgttccg tcgcgggcga catcccgacg tatggcgtcg tgaacaaggc
     3781 ggacctcgag aaggagcgcg ctctcccggc cgcggaggtc gaagcgttct tcaagaggcg
     3841 cggctggccg tggtcgtaca cgagcgcgaa gaccggggcc ggcgtgctcg agacgttcgt
     3901 cggcatcgtg aagcacgtcc tcgggagccg cggcgtgacc taggcgatgc gccaccggcg
     3961 gtgggcctcg gcccccttcg tgaagcagta gtggaccgtg ttgaattccg tgcgcatcgc
     4021 gccgacgtcg gcggcgacct tctccgaggg ctcgtgcttg accgcgacgc gggcgaacag
     4081 gtcggcgacc tcgtccatct gggattcccg catgccgagg cgcgtgagtt cttgcgtccc
     4141 cagacggacg ccgctcggct tgacgggaga cgtgtcccac ggaaggaggt tcttgttcgt
     4201 gatgatgttc gctttctcca ggtccgccga cagcttcgca ccgccgccga gggcggccac
     4261 gtcgagggcg accgtgtggc tctccgtgaa tccgtgtttc tcggcgagga ccttgatccc
     4321 ccgttcgtgg agcgcctggg cgagcgcctt cgaattccgg acgatctggg cggcgtactc
     4381 ccggccgaac tcgacgaact cggcgagggt gatgccgagg gccgccatcg catggaggtg
     4441 gtggttcgag acgacgcccg ggaacacggc ccgttggagc cgcttgatga acttctcgtc
     4501 gtcggagtcg gacagcagga tcccgtgctg cggccccggg agcgtcttgt gcgtcgatcc
     4561 cgtgaggacg tcggcccctt cgtggagcgg gtcctggaac tgcccgcccg cgatgagccc
     4621 gagcacatgg gcgccgtcgt accagacgga gcaaccggcc tcctggaacg cgtcgcgcaa
     4681 gtcggccagg ggcgtcggga acaggaagac actctgcccg aacgcggcga ccttgggctt
     4741 cacgagcttg atcagcgtgg ccgtcccgtc gacgtcgatg ttcatccggt ccacgtcgaa
     4801 cggatagttg acgttgttca cgccgcgcat cccggcggcc ccgaacttcg cggagctgat
     4861 gtgcgcgccg tggctcaggg ccacggacgt catgatgtcg cccggctcga ggagggcgaa
     4921 gtacacggcc atgtttgcga ccgtgccgct cgtcagccgc gggtccgcgt ggcgcacgcg
     4981 gaagatcttc ttcgccagcg cgacgacccg gtcctcgacc tcgtcgacga acgtgttgcc
     5041 ctgatagtat cgttcgtgcg gcaggccttc ggcgtagcgg tcgccgaagt cggtcagcag
     5101 catctcccgc gccatcgggc tgatgatgtt ctccgacgcg atcatcggga ggcatcgcgc
     5161 gaaccaggcg tggtggcggt ccacctggtc ctcgatgaag gcgacgtctt cgttcatccg
     5221 gaccgcgagg gaaccggcgc ggcggataaa tacgttgact cgggcgctag aaacagtgga
     5281 ccttcccgtc gacgatgcgt tccgtcagct tgtagatctt ctcgagttcc tcgtcgatga
     5341 gcgcctccgc gtcccgctgg agcgagctga ggtgcgtccc cttctccggg atgatctggg
     5401 ccgtcgcggc ctgcggctcg tcgatcgggt tcccgatctg ggagacgatg cggacccaga
     5461 cctccttcac cttaccctcg tgctcgcgga cgaggcggtc ggcgatgtcg aacgagagga
     5521 ggttgtacag cttgcccacg tgggtcacgg gattcttgcc cgcggcggcc tccatggaca
     5581 tcggccggta gggcgtgatg aggccgctca cgcggttccc gcgcccgacg ctgccgtcat
     5641 ccccgttctc ccaggagagc ccggtgaccg tgagatagaa gatcccggcg tcgtagttgt
     5701 cgcccgtgtt gatgtcgacc ttcacggtcc ggtcggtgaa cttcaccgcg ttgtccagca
     5761 gccgctcccg cagctcctcg accacgcttc ggtagtggtc cttgtccggg acgtatttgt
//
LOCUS       DATLMA010000545         1313 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_52973, whole genome shotgun sequence.
ACCESSION   DATLMA010000545 DATLMA010000000
VERSION     DATLMA010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52973"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..599)
                     /locus_tag="VNA10_07030"
     CDS             complement(<1..599)
                     /locus_tag="VNA10_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37471.1"
                     /translation="MPSPAPAGLPVPYWPSVVVKPDTIRGIQTYYVTLILDMIFGVFA
                     LIVGLSAILITVTDPASAIAAAAITGSAACGLVIVFVINFIVSLMAVIRMHHGADEYG
                     PEHAVNARRGVLFKWIGTTLSTLAAILVVYLFLAGSSLLFGGPAPAVLYVPLLVTVFW
                     TAGVSSKGQMYRFMIRSLQPPETRRWSDLASFLIPALGA"
     gene            complement(673..1095)
                     /locus_tag="VNA10_07035"
     CDS             complement(673..1095)
                     /locus_tag="VNA10_07035"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HVG37472.1"
                     /translation="MPAVGAIVFRDGAVLLVKRGAEPNHGRWSLPGGSLETGETVEAA
                     AVRETREETTVEVRPLRVLDVRDFIERKDGRVRWHYVLIDVLCEYVQGDPFPATDAEN
                     ARLIPLGELGEYEVVPAALEVLQMTSGRRIVPLDATRD"
BASE COUNT          270 a          410 c          426 g          207 t
ORIGIN      
        1 atcgcaccga gcgcgggaat gaggaagctt gcgagatccg accatcgtct tgtttctggc
       61 ggctgaagcg aacgaatcat gaaccggtac atctggcctt tcgaactcac gcccgccgtc
      121 cagaagaccg tcacgaggag cggcacatac agaaccgccg gagcggggcc accgaacagg
      181 agcgaactgc cggcgaggaa gaggtacacg accaggatcg cggcgagggt agagagcgtc
      241 gtcccgatcc acttgaagag gaccccgcgc ctggcgttca cggcgtgctc cggcccgtac
      301 tcgtcggcgc cgtggtgcat ccggatgacg gccatcaggc tcacgatgaa gttgatgacg
      361 aacacgatca cgagaccgca ggcggcagag cccgtgatcg ccgcggccgc gattgcgctc
      421 gccggatcgg tgacggtgat gaggatcgca gagaggccta caatcagcgc gaacactccg
      481 aagatcatgt cgaggatcag agtgacgtag tacgtctgga tgccgcggat ggtgtccggc
      541 ttcacgacca cgctcggcca ataggggacc ggtagaccgg ccggcgccgg gcttggcatc
      601 gccacagttg gaaagcattc cgagccgcga taaagatatc gatgatcttc ggtcgggcac
      661 acctcgagcc gactagtctc gagtggcatc aaggggaacg attcgtcgtc ccgacgtcat
      721 ttggaggacc tcgagcgctg ccgggaccac ctcatactcg cctaactcgc cgagaggaat
      781 gagccgcgcg ttctccgcgt ccgtcgccgg gaacgggtcc ccctggacgt attcacagag
      841 cacgtcgatc agaacgtagt gccaacggac ccggccgtcc ttccgttcga tgaagtcgcg
      901 gacgtcgagg acgcggaggg gccgcacctc gaccgtggtc tcctcccggg tctcgcggac
      961 cgccgccgcc tcgaccgtct cgcccgtctc caaggacccg ccgggcaggc tccaccgacc
     1021 gtggttcggc tcggcgccgc gcttcaccag gaggaccgcg ccgtcccgga atacgatagc
     1081 gccgaccgca ggcacggggc gactcgggaa ttcgtttcga gacgacacaa tccaggaact
     1141 cggtgaggcg catcaagcct acgtcaatgc accggcatgt gccatgagat cgaaatcatc
     1201 gaacgtccgc tgatgtagga cgtactggag cacttcgctc gttcggacgt aacgcgacat
     1261 cggaatgtcg agacgcgtgt ggagatagtc gagggtgtcg gccatcgacg gaa
//
LOCUS       DATLMA010000546         2194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_53543, whole genome shotgun sequence.
ACCESSION   DATLMA010000546 DATLMA010000000
VERSION     DATLMA010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53543"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VNA10_07040"
     CDS             <1..433
                     /locus_tag="VNA10_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016493060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydroxyquinol 1,2-dioxygenase"
                     /protein_id="HVG37473.1"
                     /translation="DGEMKIKPEYAERFGLLNLYEYLARNDVTWNPEIVSAVEYSLFC
                     PTTEEYILPITHGNDRVEWFLLLNGQISMEVRDRDTGILLAYLHMKPGDCTAMPADIS
                     HNLWAPERSMLLVWENGNPQLPELIRLGKTPTAPLEEFGLK"
     gene            463..789
                     /locus_tag="VNA10_07045"
     CDS             463..789
                     /locus_tag="VNA10_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37474.1"
                     /translation="MPSPLVNRYAIYFELPDHGKVPQSIAREPSLLMAVENCLNTYQA
                     TGHTGFLIDDTRAHREFHVQRDVLLQLVFLRHQDRTRYFEILNRLDRQGGQDELVSFL
                     AAHARL"
     gene            870..2000
                     /locus_tag="VNA10_07050"
     CDS             870..2000
                     /locus_tag="VNA10_07050"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HVG37475.1"
                     /translation="MVLAARFQSLQAEMESRLFERREEIEGLILALLSRQPILLVGPK
                     GAAKSMMIRMLANSIQGARYFERLLTRFTLPDELFGPVSISALKQDRFSRITRGYLPE
                     AHFGFLDELWKANSSILNSLLAIINERLFYNDGEVIQCPLETMMGASAELPQEEALSA
                     LYDRFLLRYRVEYIAEDGHLVEMMADNRPPVLTTRITLDEIHAARDAVAAVEFDRPLL
                     ESIAKIRRQLEGEGLTLSDRRYKESLSIIRAKAWLQGRAYAVEDDLAVLANVLWDDPA
                     SEPMVRGLVLDVANPHDKRAREIMDALQVALTNLQGLDDPRDRTMAAVEFLSKLRTAR
                     AELQGFRERLRRREADESQLAFFLGETDRYEVLVKHEYLETG"
     gene            2012..>2194
                     /locus_tag="VNA10_07055"
     CDS             2012..>2194
                     /locus_tag="VNA10_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37476.1"
                     /translation="MAFGPSAPAISRSTIVHDPFDQEAFDEILPKAAGLRLLLTESEV
                     PLAQQLAFDLFCSFYKY"
BASE COUNT          402 a          735 c          676 g          381 t
ORIGIN      
        1 ggacggggag atgaagatca agccggaata cgcggagcgg ttcgggctgc tcaacctgta
       61 cgagtacctt gcgcggaacg acgtgacgtg gaacccggag atcgtttccg ccgtcgagta
      121 cagcctgttc tgcccgacga cggaggaata tatcctgccg atcacccacg gcaacgaccg
      181 cgtcgagtgg ttcctcctat tgaacgggca gatctcgatg gaagtccgcg accgggacac
      241 gggtatcctg ctggcatacc ttcacatgaa gcccggcgat tgcaccgcga tgcccgcgga
      301 catctcccac aacctgtggg cccccgagcg gtccatgctg ctcgtctggg agaacgggaa
      361 tccgcagctc cccgagctca tccgcctggg caagactccg accgcgccgt tggaggagtt
      421 cgggctcaag tagcgtcgcc tcgaacgttt cgagccgggt ccatgcccag ccccctcgtg
      481 aatcggtatg cgatctactt cgagctccca gaccacggaa aggtccccca atcgatcgcg
      541 cgggagccca gcctcctcat ggcggtcgag aactgcctga acacgtacca agcgaccgga
      601 cacaccggct tcctgatcga tgacacgcgg gcccaccgcg agttccacgt ccagcgagat
      661 gtcctgctcc agttagtctt cctccgacat caggaccgaa cccgctattt cgagatcctg
      721 aaccggttgg accgacaagg gggccaggac gagctcgtat cgttcctcgc cgcgcacgcc
      781 cgattgtgaa ccgccgcgtt ggcctcctct gcccacgcgg tccgtcgaaa gggatttgag
      841 caccccggcg ccttaagcgt gtcccacgca tggtgctcgc cgcccgcttc cagtcgctcc
      901 aggccgagat ggagagccgc ctcttcgagc gacgcgagga gatcgaaggg ctgatcctgg
      961 ccctcctgtc ccgccagccc atcctgctcg tcggcccgaa gggcgcggcg aaaagcatga
     1021 tgattcggat gctcgcgaac tcgatccagg gggcgcgcta cttcgagcga ctcctgacgc
     1081 ggttcacgtt gcccgacgag ctgttcggcc cggtctccat ctccgcgctg aagcaggacc
     1141 ggttctcgcg gatcacgcga ggatatctgc ccgaggccca cttcgggttc ctcgacgagc
     1201 tctggaaggc gaacagctcg attctgaaca gcctgctggc catcatcaac gagcggctct
     1261 tctacaacga cggagaggtg atccagtgtc ccctggagac gatgatgggc gcctccgccg
     1321 agctgccgca ggaagaggcc ttgtccgcct tgtacgaccg gttcctgctc cggtaccggg
     1381 tcgagtacat cgccgaggac ggtcacctgg tcgagatgat ggcggacaac cggcctccgg
     1441 tcttgacgac gcggatcacg ttggatgaga tccacgccgc gcgcgacgcc gtagccgccg
     1501 tcgagttcga ccggccgctc ctcgagtcga tcgcgaagat ccgacgtcaa ctcgagggcg
     1561 aaggcttgac cttatccgat cgccggtaca aggagagcct ctcgatcatc cgcgcgaaag
     1621 cgtggctcca gggccgcgct tacgcggtcg aggacgacct cgcggtcctc gcgaacgtcc
     1681 tctgggacga tcccgcgtcc gagccgatgg tccggggcct cgtccttgac gtcgcgaatc
     1741 cgcatgacaa gcgcgcgcgg gagatcatgg acgcgctcca ggtcgcgctg acgaacctcc
     1801 aaggcctcga cgatccgcgg gaccgcacca tggcggcggt cgaattcctc agcaagcttc
     1861 gaaccgcgag agccgaactg caagggttcc gcgagcggct ccgacggcgc gaggcggacg
     1921 aatcccagct cgcgttcttc ctcggtgaga ccgaccgata cgaggtcctc gtgaagcacg
     1981 agtacctgga gaccggctag ggggttgcgt cgtggcgttc gggccttccg caccggccat
     2041 ttcgaggagc acgatcgtcc acgacccgtt cgaccaagaa gcgttcgacg aaatcttgcc
     2101 gaaggccgcg gggctccgtc tcctattgac ggagagcgag gtccccctcg cgcaacaact
     2161 tgcgttcgac ttgttctgct cgttctacaa gtac
//
LOCUS       DATLMA010000547         1015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_176455, whole genome shotgun sequence.
ACCESSION   DATLMA010000547 DATLMA010000000
VERSION     DATLMA010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176455"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..>1015
                     /locus_tag="VNA10_07060"
     CDS             58..>1015
                     /locus_tag="VNA10_07060"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HVG37477.1"
                     /translation="MTTQRLREVLKDARDDLQSVTELIAAWSSGPGQETRLPTEVKLR
                     LMRDVVRNPRLRMIALLFGRYRRLGLRERTLPAMRASQEVVDFVQGGDVARALAGELS
                     SFAMDEREDLFYAKVVTHSLLIYELWRREEEPRSVYLCIDNSGSMAGEKEVWAKASAL
                     ALAHLALAENRPVEVVLFGDAADPLRVVSMRPEDNPSTRLEKLLDVASYFLGGGTDFV
                     KPLSHVLDAVEAGHHTGSDLLFVSDGLCPIPEGFVRRFREAKSRYDLRMTSVLIGEEP
                     FALGEISDTVHRLDEALQAGEALAAHFASAFLERGHEPMHAVR"
BASE COUNT          171 a          323 c          340 g          181 t
ORIGIN      
        1 gaggacaccc gcgcggcgga agacgctcgg gactcgtcat ccgagtcggc cggcgccgtg
       61 acgacgcagc gtcttcgcga ggtgctgaaa gacgcccgcg acgatctgca gagcgtcacg
      121 gagctcatcg cggcatggtc ctcgggcccg ggccaggaga cacgactgcc aacggaggtg
      181 aaattgcgcc tcatgcgaga cgtcgtccgc aacccgcggc tccggatgat tgccctcctg
      241 ttcggccgtt atcgacggct gggtctgcgg gagcggaccc ttccggcgat gcgcgccagt
      301 caagaggtcg tcgacttcgt ccaaggcggc gacgtcgccc gagccctcgc gggagagctg
      361 tccagtttcg cgatggacga acgggaagac ctgttctacg cgaaggtcgt cacccactcc
      421 cttctgatct atgagctgtg gcgtcgcgag gaggaaccgc gctctgtgta cctatgcatc
      481 gacaactcgg ggagcatggc gggcgaaaag gaggtgtggg ccaaggcgtc ggcgctcgcc
      541 ctcgcccatc tcgcgttggc cgagaatcgc ccggtcgagg tcgtcctgtt cggagacgcc
      601 gcggatccgc tccgcgtcgt ttcgatgcgg cccgaggaca atccgtcgac gcggctcgag
      661 aagctcctcg acgtggcctc gtacttcctc ggaggcggga ccgacttcgt gaagccccta
      721 tcccacgtcc tcgacgcggt tgaggcggga catcacacag gcagcgatct cttgttcgtt
      781 tccgacgggc tctgcccgat cccagaagga tttgtccgaa ggtttcggga ggcgaagtca
      841 cgctacgatc tgcggatgac gtcggtgttg atcggagaag agccctttgc gttgggagag
      901 atttccgata ccgtccaccg attggacgag gcccttcaag ccggcgaggc gctcgccgcg
      961 catttcgcct ccgcgttcct cgaacgcggg cacgaaccga tgcatgcggt acgcg
//
LOCUS       DATLMA010000548         1581 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_657270, whole genome shotgun sequence.
ACCESSION   DATLMA010000548 DATLMA010000000
VERSION     DATLMA010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657270"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /gene="nadE"
                     /locus_tag="VNA10_07065"
     CDS             complement(<1..355)
                     /gene="nadE"
                     /locus_tag="VNA10_07065"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HVG37478.1"
                     /translation="MAELVPRFKEEQVFIIQAFVVHSFRETGRKGVVLGLSGGVDSAL
                     VAKLCADALGPQRVLAVAMPDGKGGKDLKDAKNFAKALDIDLRVVGIAPIVNSLESRL
                     LGFQADQVARGNLRAR"
     gene            436..1296
                     /locus_tag="VNA10_07070"
     CDS             436..1296
                     /locus_tag="VNA10_07070"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HVG37479.1"
                     /translation="MNANEATLVWVDEYSRMAEAYDKNVTGRFEPIAQEVARLANPKP
                     GELFLDVGTGTGLLACLIAPHVLPQGVVAIDLADGAISVASYRAGNAGIRNIRFEMLD
                     SRNIVYHGKLFDAAVSNLGIPALGYDRVFPEVHRVLKPSGRFVFSEWPTDPNPSFAAL
                     RELLEKHGPRSPSKDLAQVREAVRLVRTDPEAKALGDPRAVLKALGVAGFEKRDATTK
                     TFPVRFTSMADLVAFAGSYGWYERELREMTAESRETFEVELANRLKPLTTSSGIEDNW
                     TLNLFVARSE"
     gene            1346..>1581
                     /locus_tag="VNA10_07075"
     CDS             1346..>1581
                     /locus_tag="VNA10_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012641684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HVG37480.1"
                     /translation="MDVEPIIRGVDAHKVYNSGAVKVHALRGVNLAIPRGEMVAIMGP
                     SGCGKTTLLNCFSGLDDLTSGDVLIEGVSLASMD"
BASE COUNT          280 a          528 c          519 g          254 t
ORIGIN      
        1 cgcgcgcacg gaggttcccg cgagcgacct ggtccgcctg gaacccgagg agccggcttt
       61 ccagggagtt cacgatcggc gcgatgccga cgacccggag gtcgatgtcg agcgccttcg
      121 cgaaattctt cgcgtccttc aggtccttgc cgcccttccc gtcgggcatc gcgaccgcga
      181 ggacccgttg cggcccgagc gcatccgcgc acagcttcgc gacgagggcc gaatcgacgc
      241 cgccgctgag cccgagcacg acgcccttcc gacccgtctc gcggaacgaa tggacgacga
      301 acgcctggat gatgaagacc tgctcctcct tgaaccgcgg gaccagctcg gccacgatga
      361 gcgcaacctt cggctccgac ataaaccctt gcggcgcgaa gcctttattg agcgaggtct
      421 cttggcggcg cggccgtgaa cgcgaacgag gcgaccctgg tgtgggtcga cgagtacagc
      481 cggatggcgg aggcgtacga caagaacgtg accgggcggt tcgaaccaat cgctcaggaa
      541 gtcgcgcgcc ttgcgaatcc gaaaccgggc gagctgttcc tcgacgtcgg cacagggact
      601 gggcttctgg cttgcctcat cgcgcctcac gtcctcccgc aaggcgtcgt cgcgatcgac
      661 ctcgcggatg gcgcgatttc cgtcgcctca taccgggccg ggaacgcggg catccggaac
      721 atccgcttcg agatgctcga ctcgcggaac atcgtctacc atggcaagct cttcgacgcc
      781 gcggtcagca acctcgggat cccagcgctc ggctacgatc gcgtgttccc agaggtccac
      841 cgcgtcctga aaccctccgg gcggttcgtc ttcagcgagt ggccgacgga tccgaacccg
      901 tcgttcgccg cgttgcggga actgctcgag aagcacgggc cgcgatcgcc gtcgaaggac
      961 ctcgcccaag tgcgggaggc ggtgcggctc gtccggacgg atccggaggc gaaggcgctg
     1021 ggggacccgc gcgcggtcct caaggcgctt ggggtcgcag gtttcgagaa gcgggatgcg
     1081 acgacgaaga cgttcccggt ccggttcacg agcatggcgg acctcgtcgc cttcgcgggt
     1141 tcgtacggat ggtacgagcg ggagctccgc gagatgaccg cggaaagccg cgagacattc
     1201 gaagtggagc tcgcaaaccg cctgaagccg ctcacgacct cgtccggcat cgaggacaac
     1261 tggacgctga acttgttcgt cgcgcgctcc gagtgagact cgtaacgaaa ccctaaatat
     1321 accgcggctc atcgaaacga cgcgcatgga tgtcgagccg attatccggg gagtggacgc
     1381 ccacaaagtg tacaactccg gggccgtcaa ggtccacgcc ttgcgcggcg tgaacctcgc
     1441 gatccctcgc ggcgagatgg tcgcgatcat gggaccgtcc ggctgcggca agacgacgct
     1501 cctgaactgc ttctccggcc tcgacgacct cacgtcgggc gacgtcctca tcgaaggcgt
     1561 ctcgctcgcc tcgatggacg a
//
LOCUS       DATLMA010000549         3774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_112212, whole genome shotgun sequence.
ACCESSION   DATLMA010000549 DATLMA010000000
VERSION     DATLMA010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3774
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112212"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..824)
                     /locus_tag="VNA10_07080"
     CDS             complement(75..824)
                     /locus_tag="VNA10_07080"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HVG37481.1"
                     /translation="MPSPRKTRSLTVAHGEIDASDKTTSLLFPSREHGPWLPFERFAE
                     TMTTSRSKLGRHSHQAEEVVIYLVEGEVDHMDAAGRRESLTPGSVAVLTAHEEVSHDL
                     EMLKGKRARWLSVVVRLPWHTEPPPTTVQIKTAGDATEGSDGTVQKPVVGPLARADGS
                     SGLECTDIEFARQATGFFRIGLDRRAVAYVLSGSGMIDDVPLKAGSGALLENMSAVAI
                     GGAPGYRLVLASIPIPAQHEDPPDAAPRRVK"
     gene            complement(911..1786)
                     /locus_tag="VNA10_07085"
     CDS             complement(911..1786)
                     /locus_tag="VNA10_07085"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HVG37482.1"
                     /translation="MGIHVPPPRDDFRIRETHVSSALRKDPLPGIDYSFNPYVGCYHG
                     CLFCYVPRILQIDRSTWGASVVVKRNAATVLAKELKRLPRGLVAISTATDPYQFVEGK
                     YRITRHALEVLLRAQWPVSVLSRAPLMTRDLDLFTQFEEIEVGMSVPTLDDRARALLE
                     PWAPPIDARLRCLRILADAGLTTFVGFAPAYPPTGGWTPEAIADAFAKAGVKKMFTRA
                     LDARWGVPEAMAKHLDGSELADDLRRMGDLETIVPFVSRVGEECRARGIDFRNSFEFR
                     PTGSNSGFGSPETGR"
     gene            1970..>3774
                     /locus_tag="VNA10_07090"
     CDS             1970..>3774
                     /locus_tag="VNA10_07090"
                     /inference="COORDINATES: protein motif:HMM:NF025681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37483.1"
                     /translation="MPRRQMSSSLARNHRALRIAGAVLAALMISVVVANLLWPGPTPP
                     AVNQPRMPPSQSPFPTFALAPVLHAARMDADANLSMRLLMTSLQGIVNRMAVELYLDV
                     PAGVAGNTSQMLSYLAVRYNVTYDVVSAQAAIDAYARRAAGIVVYDPSRPESIDIGTL
                     LAAQLNAVLAGPDLAGWLSGRYALPILFDYAQRSDWTSLDAVGAYDRALRELYPRAYP
                     YLLAILPPDRWAIRDYLVQTGTFVFYLTQGILASPAETAETMRILAAAPRGIPILGWF
                     NSPTLTEENSFVQMASAAGKFVVGVQDVPNLSVLTALGRNETHRQVSPSAPPVPVLED
                     KTYVVLGIPDGDNLDFAAGRMWDLWSEPVRGTIPFAWSVNPLLVDLAPPLLDRYYDSA
                     TPLDRFLASPSGAGYLYPDYTGPGDLSPFVNFTKRYLDAADMDVVWLLNAFAASEITY
                     TSATLSAYVDGSRPAGIVLDYDDQPRTRDSWVQAGTQAVAPVIRSTHFWTTADNVLGK
                     IDTALDSERGGPNFLWLTVYTFRFDLNDARALVGELSRRMGGNLEVVTPSAFFDLLRA
                     DFVRTARSRFDAMAGDPIGSFLFSGMVESAKARLQ"
BASE COUNT          617 a         1270 c         1211 g          676 t
ORIGIN      
        1 ggacgccctc gctctcgagg caggcgacca agagttgagc ggcgttcatg cccctgcacc
       61 ggcggtccgg cgactcactt cacccgacgc ggagccgcgt ccggagggtc ctcgtgttgg
      121 gcggggatcg gaatggaggc gaggaccagc cggtatcccg gcgctccgcc gatcgcgacg
      181 gccgacatgt tctcgaggag ggcgccggaa cccgctttga gcggcacgtc gtcgatcatg
      241 ccggagccac tcagcacgta cgcgaccgcc cggcggtcca gtccgatccg aaagaaaccg
      301 gtggcctgtc gggcgaactc gatgtccgtg cattcgagac ccgacgaacc gtcggcgcgg
      361 gcgagcggtc cgacgaccgg cttctggacg gtcccgtcgg atccctcggt cgcgtcgccc
      421 gccgtcttga tctggaccgt ggtcggcggc ggttccgtgt gccacgggag gcggacgacg
      481 accgacaacc agcgagctcg tttccccttc agcatctcga gatcgtgaga aacttcctcg
      541 tgggccgtga ggacggcgac ggaccccggg gtgagcgact cgcgccgacc ggcggcgtcc
      601 atgtggtcga cctccccctc gaccagatag atgacgacct cctcggcctg atggctatga
      661 cgcccgagct tcgagcgcga tgtcgtcatc gtctcggcga agcgttcgaa cggcagccaa
      721 ggtccatgct cccgactcgg gaacaggagg ctggtggtct tgtcggatgc gtcgatctcc
      781 ccatgagcga cggtcagact gcgggttttc cgcgggctcg gcatggcagc ttctcccctc
      841 actccggaag cgacgccgcc gaatatagtt cgtggcctcg ggaaagggac cgatcggcca
      901 cgtgccgaga ctaccgtccc gtctcgggag atccgaaacc cgaattcgat cctgtaggcc
      961 ggaactcgaa cgaattccga aaatcgatcc cgcgggctcg gcattcttcc ccgacccggg
     1021 acacgaaggg cacgatcgtc tcgagatcgc ccatccgtcg gagatcgtcg gcaagctcgg
     1081 atccgtcgag gtgcttggcc atcgcttcgg ggacgcccca ccgggcgtcg agcgcgcggg
     1141 tgaacatctt cttcaccccg gccttggcga acgcatccgc gatggcttcc ggcgtccatc
     1201 caccggtcgg cgggtatgcc ggtgcgaaac cgacgaacgt ggtcaggccg gcgtcggcca
     1261 ggatccggag gcagcgcagt cgcgcgtcga tcggcggcgc ccatggttcc aggagggccc
     1321 gcgcccgatc gtccagggtc gggaccgaca tgccgacttc gatctcctcg aattgggtga
     1381 acagatccag gtcgcgggtc atcagcggcg ctcgtgagag gacggacacc ggccactggg
     1441 ccctcagcag gacttcgagc gcatgccggg tgatccgata cttcccctcg acgaactggt
     1501 agggatccgt tgcggtggag atcgcgacga gacccctggg cagacgcttc aattccttcg
     1561 caaggaccgt cgccgcgttc cgcttcacga cgactgaggc gccccaggtg cttcgatcga
     1621 tctgcaggat ccggggaaca tagcaaaaga ggcatccatg gtaacacccg acgtacggat
     1681 tgaatgagta atcgatgccc ggcaacggat ccttccggag cgccgacgag acgtgggttt
     1741 cccggatccg gaagtcgtct cgagggggag ggacgtggat gcccatgaat tcgtccatgc
     1801 agggaacgaa tccgtcggag cctcatggct tccctggggg agggctgcga aagtgattcc
     1861 tcctcgcccg aggccttggg ccgagacact tcaccgcggg tccgcctgcg attgaggaaa
     1921 agctatagcc gctcgcccgc tgccgcagtc ccgacgggcg cccatcggcg tgccgcggag
     1981 gcagatgtcc tcgagtctgg cccggaatca tcgcgcgctc cgaatcgcgg gcgcggtcct
     2041 tgcggccctc atgatctcgg tcgtcgtggc gaacctgctg tggccgggcc cgacgcctcc
     2101 cgcggtcaac cagccgcgga tgcccccgag tcagagcccc tttccgacgt tcgcgctcgc
     2161 ccccgtcctc catgccgcga ggatggacgc ggacgcgaat ctgtcgatgc gccttctcat
     2221 gacgtcgctc cagggcatcg tgaatcgaat ggcggtcgaa ctttacctcg acgttccggc
     2281 gggcgtcgcg ggcaacacct cccagatgtt gtcgtatctg gcggtgcggt acaacgtgac
     2341 gtacgatgtc gtgtcggcgc aggccgcgat cgacgcctac gcacgccgtg ccgcgggcat
     2401 cgtcgtgtac gatccgtcga ggcccgaatc catcgatatc gggacgctcc tcgcggcgca
     2461 actgaacgcg gtccttgcgg ggccggacct cgcgggatgg ctgtccggtc gctatgccct
     2521 cccgatcctc ttcgactacg cccagagaag cgactggacg tccctcgacg ccgtcggggc
     2581 gtacgatcgc gcactccgag agctgtatcc gcgcgcatac ccgtatttgc tcgcgattct
     2641 cccgccggat cgatgggcga tccgagacta tctcgtgcag accgggacgt tcgtcttcta
     2701 cctcacgcaa gggatcttgg cttcgcccgc ggaaaccgcg gagacgatgc ggattctcgc
     2761 cgccgctccc cgcggcatcc cgatcctggg ttggttcaac agtccgacct tgacagaaga
     2821 gaactcgttc gtccagatgg cctccgccgc gggcaagttt gtcgtcggcg tacaggacgt
     2881 gccgaacctc tccgtcctca cggccctcgg gcgaaacgag acccatcggc aagtctcgcc
     2941 gagcgccccg cccgtgcccg tccttgagga caagacgtac gtcgtcctcg gcataccgga
     3001 cggcgacaat ctcgatttcg cggccggacg catgtgggac ctgtggtccg agccggtccg
     3061 cggcaccatc ccgttcgcat ggagcgtcaa cccgctcctc gtcgatcttg cgccgccgct
     3121 cctcgaccgg tactacgaca gcgccacccc gctcgatcgg ttcctcgctt ccccgagcgg
     3181 cgcggggtac ctgtacccgg actacaccgg accgggcgac ctttcgccgt ttgtcaactt
     3241 cacgaaacgg tacctcgacg ccgcggacat ggacgtggtc tggttgctca acgccttcgc
     3301 cgcgtccgag atcacgtaca cctcggcgac tctctccgct tacgtcgacg gctcccgtcc
     3361 ggcggggatc gtcctcgatt acgacgatca gccgaggacg cgcgattcgt gggtccaggc
     3421 cgggacccag gcagttgcgc cggtcatccg gtcgacacac ttctggacga cggccgacaa
     3481 cgtcctcgga aagattgaca ccgcactcga ttcagagcgc ggcggtccga attttctctg
     3541 gctcaccgtc tacacgttcc gtttcgatct gaacgacgca cgggccttgg tgggcgagct
     3601 ttcaaggcga atgggtggga atctcgaagt ggtcactccc tccgcgttct tcgacctgtt
     3661 gcgggcggat ttcgtcagga ccgctcggag ccgcttcgac gcgatggcgg gggatccgat
     3721 tggttcgttt cttttctctg gcatggtgga gtccgcaaag gcgcgtctgc aaga
//
LOCUS       DATLMA010000550         2210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_54308, whole genome shotgun sequence.
ACCESSION   DATLMA010000550 DATLMA010000000
VERSION     DATLMA010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54308"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1252)
                     /locus_tag="VNA10_07095"
     CDS             complement(26..1252)
                     /locus_tag="VNA10_07095"
                     /inference="COORDINATES: protein motif:HMM:NF017570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF835 domain-containing protein"
                     /protein_id="HVG37484.1"
                     /translation="MAIARQKTGRVFQKHVLLFAISLLVCAIISNVLISIYITQPGQG
                     SQTALEAGIVLSKRVQATFDYMFGITIGAFIVVATTAGITSRKDFFHYMTNEFPNSYV
                     FYVFIMVVTIVTILVSPVQIVQANPPLISFEPYFLFINGLAVATLILYAPYRFILHMR
                     RTKPGEEVRRDTFLIIFGISGFAVGELLFEILLPNFGIDLRAPGFILEMALVGLIAFG
                     VREKSFLQTLIVPEAEAHLLTKPTYELDRGYTYAVLERDASEAFEIFKDYVTHGTQGL
                     CITRRAPKAVMTEYGLERTPILWLSRVSTDKNAVRPSPPEKVALAVEHFIEVSEHCVV
                     LLDGLEYLVSHNDFGSVLALLHDLNESVAMREAVLVVPFDPTAFNEREIALIRREVRL
                     LGPLAEEFGPVAKVSR"
     gene            1506..>2210
                     /locus_tag="VNA10_07100"
     CDS             1506..>2210
                     /locus_tag="VNA10_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37485.1"
                     /translation="MPVQSYNAIGINPEDLDLLSRTVLRLGGYAEGLFDYHDFGFDKN
                     FLKDHISSVHSTLKRLKESAPPDGLPLRPPNIPPGAFWEDQGEVWNYLQTLRFAAGAT
                     MMTEQYLPHMTPDNLQRAMTAKIFRECVIGILDDLIDKGNYSYLEAKDLHHMVLSSML
                     DPDFDSTSFTKRLVTMLRQEQIPLFDLINNIVRGFNVLWNNSPHGHDYFYQMEIMDER
                     VALGQALSMFEKEPNFS"
BASE COUNT          454 a          688 c          684 g          384 t
ORIGIN      
        1 agcccgataa aagagtttgt cgcggctacc gggagacctt cgcgacggga ccgaactcct
       61 cggcgagcgg gccgaggagc cgcacctcgc ggcggatgag ggcgatctcc cgttcgttga
      121 aggcggtcgg gtcgaatggg acgacgagga cggcctcccg catcgcgacg gactcgttca
      181 ggtcatgcaa gagcgcgagg acggatccga agtcgttgtg ggagaccagg tactcaaggc
      241 cgtccagcag gacgacgcag tgctcgctga cctcgatgaa atgttccacg gcgagcgcga
      301 ctttctccgg agggctgggc cggaccgcgt tcttatccgt cgacacgcga ctcagccaga
      361 ggatcggcgt gcgctcgagc ccgtactccg tcatgacggc cttcggcgcg cgtcgcgtga
      421 tgcacagtcc ttgcgtcccg tgggtgacgt agtccttgaa gatctcgaac gcctcgctcg
      481 cgtcccgctc caggaccgcg tacgtgtagc cccgatccaa ttcgtaggtc ggcttcgtga
      541 gcaggtgggc ctcggcctcc ggcacgatca acgtctggag gaacgacttc tcgcgcaccc
      601 cgaaggcgat caggcccacg agggccatct cgaggatgaa gccgggcgcc cgcaaatcga
      661 tcccgaagtt cgggaggagg atctcgaaga ggagctcgcc gacggcgaag ccggagatcc
      721 cgaagatgat caggaacgtg tcccgccgga cttcctcgcc cggcttcgtc cgccgcatgt
      781 ggaggatgaa ccggtacggc gcgtacagga tcagggtcgc gacggcgagg ccgttgatga
      841 acaggaaata gggctcgaac gagatgaggg gcgggttcgc ctgcacgatt tggaccgggg
      901 acacgaggat cgtgacgatc gtcacgacca tgatgaagac gtaaaacacg tacgagttcg
      961 ggaactcgtt cgtcatgtag tggaagaagt ccttccgcga agtgatcccg gcggtcgtcg
     1021 ccacgacgat gaacgcgccg atcgtgatgc cgaacatgta gtcgaacgtc gcctggacgc
     1081 gtttcgagag gacaatgccc gcctcgagcg ccgtttgtga tccttgccct ggctgtgtga
     1141 tgtaaatgct gatcaggacg ttcgagatga tcgcgcagac gaggagggag atcgcgaaca
     1201 ggaggacgtg tttctggaac acccggccgg tcttctgccg cgcaatcgcc acgatgatca
     1261 gggccgacag aaagagcgcg ctcgccgcgc tcaggtaggt tacaatgccc gatgcatccg
     1321 ccagggacgc tcacccactg agaatgaaca ataccctccc tcgaagctat ttaagcggtc
     1381 cccgcccgtt atccgaagcg attccagtcc ggatcccggc ggggtgttct cagcaataat
     1441 aatcgttacg gagaaccaac aggcccctct tcatatgggg tcacggagac gtcttcttcg
     1501 gttccgtgcc agtccagtca tacaatgcca tcggcatcaa ccccgaggac ctcgatctcc
     1561 tctcgcgaac cgtcctgcga ctcggcggct acgcggaagg ccttttcgac taccacgatt
     1621 tcggcttcga caagaacttc ctgaaggacc acatctcgag cgtccactcg acgttgaaac
     1681 ggctgaagga aagcgccccg cccgatgggc tccccctccg gccgccgaac atcccgcccg
     1741 gcgcgttctg ggaggaccag ggcgaggtat ggaactacct ccagacgctg cgcttcgccg
     1801 cgggcgcgac gatgatgacg gagcagtacc tcccccacat gacgccggat aacctccagc
     1861 gcgcgatgac ggcgaagatc ttccgagagt gcgtcatcgg catcctggac gacctgatcg
     1921 acaagggcaa ctactcgtac ctggaggcga aggacctcca ccacatggtc ctcagctcga
     1981 tgctcgaccc ggacttcgac tcgacgagct tcacgaagcg actcgtgacg atgctgcggc
     2041 aggagcagat cccgctcttc gacctgatca acaacatcgt ccgcggcttc aacgtcctct
     2101 ggaacaactc gccgcacggt cacgactact tctaccagat ggagatcatg gacgagcggg
     2161 tcgccctcgg ccaggcgctc tcgatgttcg agaaggagcc gaacttctcg
//
LOCUS       DATLMA010000551         2015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_535044, whole genome shotgun sequence.
ACCESSION   DATLMA010000551 DATLMA010000000
VERSION     DATLMA010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535044"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VNA10_07105"
     CDS             complement(<1..262)
                     /locus_tag="VNA10_07105"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37486.1"
                     /translation="MWARSDLVAELKGLGLLRTGDLERSFLRVRQESFLPESFGLLAY
                     ADMPLPLHEAPHPTTMPSARCLIAALDLLELQDGLRILVEGCR"
     gene            complement(323..1270)
                     /locus_tag="VNA10_07110"
     CDS             complement(323..1270)
                     /locus_tag="VNA10_07110"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HVG37487.1"
                     /translation="MQTRTLGRTGLKVSEIGFGAWAIGGNAHGNSYGPTDDAESIAAV
                     QRAIDMGVNFFDTADVYGWGHSEEVLGEALRARRDSVYIATKVGGDFYHGGVRMNFDS
                     GYIAFALERSLKRLRTDHVDVYQLHNPPAEMMGDPQTFEVLEALKAEHKIDHYGVSVH
                     EPSEAALCLGAGSPEVLQIPFSLFRQEWIDETLDAARKANVGIIAREPLGNGFLTGTI
                     RPDARFPPGDIRHHWPPAMVAGRAAAAKELSFLVQPDRTMAQAALRFVLAYPEVAVTI
                     PGAKTVTQAEENAASSDAPPLSKDDVERARRLYAKDFGM"
     gene            1434..>2015
                     /locus_tag="VNA10_07115"
     CDS             1434..>2015
                     /locus_tag="VNA10_07115"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HVG37488.1"
                     /translation="MTETDEVDPGGLEAGFSSAKRQILLTLKRRGTVSLTDMAGELRI
                     SKMATLKRLNGLEAKGLVERSFKAGGRGRPRAFFNLSKNSATLFPEAYTHMTLCALNF
                     IEEKLGRDAVVRLLKQRAQEVLDANRNRIPDGGLSDRVGELVKIRDEGGYMAELGHSR
                     KNVVEMLEHNCPIMAVAETYPEACGVEREMFQNL"
BASE COUNT          377 a          623 c          661 g          354 t
ORIGIN      
        1 cgcggcagcc ttcgacgagg atccgaaggc cgtcttggag ctccagcaaa tcgagcgcgg
       61 cgatgaggca ccgcgcggaa ggcatcgtcg tcgggtgagg cgcctcgtgg agcggaagcg
      121 gcatgtcggc ataggcgaga agcccgaacg actccggcag gaacgattct tgtcggaccc
      181 ggaggaacga gcgctcgagg tccccggtcc gcagaaggcc gagtcccttc agctcggcga
      241 ccaggtcgga tcgggcccac atccgcgctg ttctccagag gaagctaatg gcgggttggc
      301 taaaaagctt cagtaacccg tgtcacattc cgaaatcctt cgcgtacaat cggcgcgccc
      361 gctcgacgtc gtctttcgag aggggtggcg catcgctcga ggcggcgttc tcctcggcct
      421 gcgtgacggt cttcgcgccc gggatcgtca cggcgacctc gggatatgcg agcacaaacc
      481 gcagcgccgc ctgggccatc gtccgatcgg gctggacgag gaacgagagt tcttttgcgg
      541 cggccgcgcg cccggcaacc atcgccgggg gccagtgatg tcggatgtct cccggaggga
      601 agcgcgcgtc cggtcgaatc gtcccggtga ggaagccgtt cccgagcggc tcgcgcgcga
      661 tgatcccgac gttcgccttg cgcgcagcgt ccaaggtctc gtcgatccac tcttgccgga
      721 acaggctgaa ggggatctgc aagacttccg gcgatccggc cccgaggcaa agagcggctt
      781 ccgacggttc gtggacggag actccgtagt ggtcgatctt gtgttccgcc ttgagggcct
      841 ccagcacttc gaaagtctgt ggatcgccca tcatctcggc cggaggattg tggagctgat
      901 agacgtcgac gtggtccgtt cggagcctct tcagcgaccg ctcgagggcg aaggcaatgt
      961 atcccgaatc gaagttcatc cgaacgcctc cgtggtagaa atcgccgccg actttggtgg
     1021 cgatgtacac actatctcga cgggcgcgca gcgcctctcc gaggacctct tcgctgtgcc
     1081 cccacccgta cacgtccgcg gtgtcgaaga agttgacacc catgtcgatc gcccgctgga
     1141 ccgcggcgat ggactcagcg tcgtccgtgg gaccgtacga gttcccgtgg gcgttgccac
     1201 cgatcgccca ggcgccgaac ccgatttcgg agaccttcaa ccccgtgcga ccgagcgtcc
     1261 gcgtctgcat cgggcgtgcg aaacgggacg gagttgtaag aaccttccga agccggagac
     1321 gggattgagc ccgttcgacc tggaacgttc tgcgttcttc atcactcggc ggatttcgaa
     1381 atcctatttt gtaaacgaat aggtatatga tattggaagg cgttttccgg cccatgaccg
     1441 agacggacga agtcgatccc ggtgggctcg aggcgggctt ctcctcggcg aagaggcaga
     1501 tcctgctgac gttgaagcgg cgcgggaccg tctcgctcac ggatatggcc ggagaactcc
     1561 ggatctcgaa gatggccacg ctgaagcgcc tcaatggtct cgaggcaaaa ggcctcgtcg
     1621 agcgctcgtt caaggccgga ggccgcggcc gaccccgagc attcttcaac ctgagcaaga
     1681 actcggcgac gctctttccg gaagcgtaca cccacatgac cctgtgcgcc ctcaatttca
     1741 tcgaagagaa actcgggcgc gatgcggtcg tacgtctcct gaagcagcgg gcccaggagg
     1801 tcctcgatgc gaaccggaac cggatcccgg acggaggcct gtcggaccgg gtcggggagc
     1861 tcgtgaagat ccgcgacgag ggcggctaca tggccgagtt gggccacagc cggaaaaacg
     1921 tcgtcgagat gctcgaacac aactgcccga tcatggcggt cgccgagacc tatccggagg
     1981 cgtgcggcgt cgagcgggaa atgttccaga acctc
//
LOCUS       DATLMA010000552         1018 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_233307, whole genome shotgun sequence.
ACCESSION   DATLMA010000552 DATLMA010000000
VERSION     DATLMA010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233307"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VNA10_07120"
     CDS             complement(<1..676)
                     /locus_tag="VNA10_07120"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HVG37489.1"
                     /translation="MAQGRGGRRKNSRDKGILEQLEKGVVLGDGGYLLELEKRGYVQP
                     GPFTPEVVLEHPAAVKELHQEFLDAGAEVLQSLAFYASKEKLATVGYANRVRDINRAA
                     VRLAREVAGDRALVAANLSLTWMYDPKDKGSADKVRRLFDEQLEAQLQEKPDFVIAET
                     FSWLGEALLAAERIEKTGMPSMVTMSFDKDPKSYDGHSPAECARALRDAGADIVGVNC
                     LRNPLLL"
     gene            771..>1018
                     /locus_tag="VNA10_07125"
     CDS             771..>1018
                     /locus_tag="VNA10_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HVG37490.1"
                     /translation="MDGTWDAVIVGGGHNGLVSAAYLARAGLKVLVLERRRIVGGACI
                     TEEVFPGVKFSRLAYSAGLLRPEIVRDLDLARFGYEVQA"
BASE COUNT          168 a          331 c          328 g          191 t
ORIGIN      
        1 ggagcagcag gggatttcgg agacaattca ccccgacgat gtccgcgccg gcgtctcgca
       61 gcgcgcgggc gcactcggcc ggggaatgcc cgtcgtagga cttcggatcc ttgtcgaacg
      121 acatcgtaac catcgacggc atgcccgtct tctcgatccg ctccgcggcg aggagggctt
      181 ccccgagcca ggagaaggtc tccgcgatta cgaagtctgg tttctcctgg agttgagcct
      241 ccagctgctc gtcgaacagt cgacgcactt tgtccgcgga tcccttgtcc ttcggatcgt
      301 acatccacgt caggctgagg ttcgccgcca cgagcgctcg atcgccggcg acctcgcggg
      361 cgaggcggac cgcggcgcgg ttgatgtcgc gcacccggtt cgcatagccg accgtcgcga
      421 gtttctcttt gctcgcgtag aaggcgaggg actgcaggac ctccgcgccc gcgtcgagga
      481 actcttgatg gagctctttc accgcggccg gatgctcgag gacgacttcc ggcgtgaagg
      541 gtccaggttg aacgtagccg cgtttctcga gttcgagcag gtagccgccg tcgcccagaa
      601 caacgccttt ctccaactgc tcgaggatgc ctttgtcccg agaattcttg cgacggcctc
      661 cccgaccctg ggccacgtct gcaggaaggg ggacggcggc ttatagtttg atagcggcac
      721 acagagcaat cgccactaac gatacgtagg tgtcccgcac tccgccgacc gtggacggca
      781 catgggacgc cgtgatcgtc ggcgggggcc acaacggcct tgtctccgcg gcgtatctcg
      841 ccagggccgg attgaaggtc ctcgtcctcg aacgacgacg aatcgtggga ggagcctgca
      901 tcaccgaaga ggtctttccc ggcgtcaagt tctcgcggct cgcgtactcg gccggcctgc
      961 tacggccgga gatcgttcga gacctcgacc tcgcgcggtt cggctacgag gtccaggc
//
LOCUS       DATLMA010000553         1068 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_233335, whole genome shotgun sequence.
ACCESSION   DATLMA010000553 DATLMA010000000
VERSION     DATLMA010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233335"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..800
                     /locus_tag="VNA10_07130"
     CDS             <1..800
                     /locus_tag="VNA10_07130"
                     /inference="COORDINATES: protein motif:HMM:NF012758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HVG37491.1"
                     /translation="SAREPLLMASAMGGIDIEVVPHDRIYMEHIPTVVGIQPYLVRSL
                     LKQLALPREVGDQIASIVGRVYDLFRKEDAELVEINPLVVTKAGSVVAGDAKLVIDDN
                     AEYRHPEYANLDQDRTPLEQEAHDKGITFIQLDGDIGVIANGAGLTMATLDILGLKGG
                     RGGTFLDLGGTDDPGKVKQAFEILIKAAPSVILLNIFGGITKADTVALGVKQALEEMH
                     TKIPVVARIKGVNEAQAKEMLRSIGMYPAETVEEAAELAVKVKSGGA"
     gene            803..>1068
                     /locus_tag="VNA10_07135"
     CDS             803..>1068
                     /locus_tag="VNA10_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010879674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HVG37492.1"
                     /translation="MAVLLSKKSRVLVQGITGHQGQFHTRAMIDFGTKVVAGVTPGKG
                     GTKVEGVPVFDSVREAVHRRRANASIIFVPAPYAKDAAIEAIEGG"
BASE COUNT          225 a          327 c          358 g          158 t
ORIGIN      
        1 gctccgcgcg agagccgctc ctcatggcga gcgcgatggg aggcatcgac atcgaggtcg
       61 tcccgcacga ccggatctac atggagcata tccccacggt ggtcgggatc caaccgtact
      121 tggtacggag cctcctcaag cagctcgcgc ttccaaggga agtgggcgac cagattgcat
      181 ccatcgtcgg gcgcgtctac gacctgttcc ggaaagagga cgcggaactc gtcgaaatca
      241 atccgctcgt cgtgacgaag gccggtagcg tcgtcgcggg agacgcgaag ctcgtcatcg
      301 acgacaacgc ggagtatcgc catccggaat acgccaacct ggaccaagac cgcaccccgc
      361 tcgagcagga ggcccatgac aagggcatca cgttcatcca gctcgacggg gacatcggcg
      421 tcatcgctaa cggcgcgggc ctcacgatgg cgacgctcga catcctcggc ctgaagggcg
      481 gacggggcgg gaccttcttg gacctcgggg gcacggacga cccggggaaa gtgaaacagg
      541 cgttcgagat cttgatcaag gcggccccct ccgtgatcct gctgaacatc ttcggcggca
      601 tcacgaaggc ggacaccgtg gccctcggcg tgaagcaggc gctcgaagag atgcacacga
      661 aaatcccggt cgtggcccgg atcaaggggg tcaacgaagc ccaggcgaag gagatgctcc
      721 ggtcgatcgg catgtatccg gcggagaccg tggaggaagc cgccgagctc gcggtcaagg
      781 tcaaatcggg aggcgcctag atttggcggt cctgctctcg aagaagagcc gcgtcttggt
      841 ccaagggatc acgggccatc aagggcagtt ccacacccga gcgatgatcg acttcggcac
      901 gaaggtggtc gccggcgtca ccccaggaaa agggggcacg aaggtcgaag gggtcccggt
      961 tttcgatagc gttcgcgagg ccgtccaccg aagacgggcc aacgcctcga tcatcttcgt
     1021 tcccgcgccg tacgcgaaag acgccgcgat cgaggcgatc gaaggggg
//
LOCUS       DATLMA010000554         2062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_780922, whole genome shotgun sequence.
ACCESSION   DATLMA010000554 DATLMA010000000
VERSION     DATLMA010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780922"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..746
                     /locus_tag="VNA10_07140"
     CDS             183..746
                     /locus_tag="VNA10_07140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37493.1"
                     /translation="MILGYVDVEDRIYDLNFATLRLRVRVEAAGPKEGSRVTFSQVAG
                     AGSASYRILEEADASAEVSMDHDGKRVPLLLTVEGHLIRHEAGLLFFATPAKRDPDDP
                     GFFLVKLRAMPSAVRYFFEDQEGREMISIPRDEILRTEAEGDGITVYVSAANVALPKE
                     KIAYAVQLRPASRVRQALSDIGPSSAG"
     gene            793..933
                     /locus_tag="VNA10_07145"
     CDS             793..933
                     /locus_tag="VNA10_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37494.1"
                     /translation="MSYDVAGLGLGGEKKKGKRKMYLYAGVAVVVIVIVIVAVWWKYF
                     RM"
     gene            1115..1756
                     /gene="psmB"
                     /locus_tag="VNA10_07150"
     CDS             1115..1756
                     /gene="psmB"
                     /locus_tag="VNA10_07150"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008084855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit beta"
                     /protein_id="HVG37495.1"
                     /translation="MATISREVETGTTTLGLVCKDGVVLAADRRATAGTLIAHKRTKK
                     VYKLDDNIGLTTAGLVGDLQVLARYITAEVELYKLKRGVSMPVEACATLTANILSGSR
                     FYPYWVQLVIGGWDRSGGHVFSLDAAGGSLPDKFVSSGSGSPYVYGVLEDHFKDDMTL
                     DEGANLAIRAVTAAMKRDAVSGEGIDVALISKDGFKMFDDKEVEKRKASMKLA"
     gene            1791..>2062
                     /locus_tag="VNA10_07155"
     CDS             1791..>2062
                     /locus_tag="VNA10_07155"
                     /inference="COORDINATES: protein motif:HMM:NF028523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-CASP ribonuclease aCPSF1"
                     /protein_id="HVG37496.1"
                     /translation="MTIEDILNDARSVVKKVVPDHVEITQVDFEGPTIVIYTKNMEVF
                     AESNDLVRQIAQQLRRRIVVRPDPSLLATPEEAEKVIREVIPPEAQ"
BASE COUNT          409 a          615 c          672 g          366 t
ORIGIN      
        1 tcccaggcgg cattgaaatt catcttgtcg gaggagaccg tcgcatccgc gatcccgaac
       61 atctatcggg aagatcaact cgccgaatac tccgccgtct cggacttcga gacgttctcg
      121 caggtcgagc tcggggagat cgccgagcaa ttccggaagg gcttcggggt ctgaggcgac
      181 ggatgatcct cggatacgtc gacgtggagg atcggatcta cgatctgaac ttcgcgacgc
      241 tgcggttgcg ggtgcgggtc gaagcggcag ggccgaagga gggttcgcgc gtcaccttct
      301 ctcaggtcgc gggcgccgga tccgcatcgt accggatcct cgaagaggcc gacgcgagcg
      361 cggaggtgtc gatggaccac gacggcaagc gagtcccgct ccttcttacc gtcgagggcc
      421 acttgattcg ccacgaggcc gggctgctct ttttcgcgac ccctgccaag cgggacccgg
      481 acgatccggg attcttcctc gtgaagcttc gcgcgatgcc gagcgcggtg cgatacttct
      541 tcgaggacca agaaggccgg gagatgattt cgatcccgcg ggacgagatt ctccggactg
      601 aggcggaagg cgacggcatc acggtgtacg tcagtgccgc gaacgtcgcg cttccgaagg
      661 aaaagattgc ctacgcggtc caattgaggc ccgcgtctcg agtgcggcaa gcgctatccg
      721 acattggccc gtcgtcggcc ggatgacgaa acccttatta cgagtcggca ggttgggccg
      781 ccgaggtccg acatgtccta tgatgtcgcg ggtctgggtc tcggcggcga gaagaagaaa
      841 ggcaagcgga agatgtacct gtacgccggc gtcgccgtcg tggtcatcgt gatcgtcatt
      901 gtcgcggtct ggtggaagta cttccggatg tgagcgggcc cgccccatcc gatccgcgcc
      961 gatccctcgg tcgcgtcgga tgagaatgcg acagcctgcg ccgcgctccg tttcgtttta
     1021 tctcgatttc gagatagaac cagaaattct taaatagtgc cggccgcatg cttcggctgt
     1081 cgtttttgac acccttttga acgggagtgt acgaatggca acgatttcca gagaagtcga
     1141 gaccggcacc accacgctgg gcctcgtctg caaggatggc gtggtcctcg ccgcggaccg
     1201 ccgcgcgaca gccgggaccc tgatcgccca caagcgaacg aagaaggtgt acaagctcga
     1261 cgacaacatc ggcctgacga cggcgggcct cgtcggagac ttgcaggtcc tggcgcgata
     1321 catcacggcc gaggttgagc tgtacaagct gaagcgggga gtctccatgc cggtcgaggc
     1381 gtgcgcgacc ctaaccgcga acatcctgag cggaagccgg ttctatccat actgggtcca
     1441 gctcgtgatc ggcggctggg accgttccgg cggacacgtc ttctcgctcg acgcggccgg
     1501 cggatccttg ccggacaagt tcgtctcgag tgggtccggg agcccgtacg tgtacggagt
     1561 gctcgaggac cacttcaagg acgacatgac gctcgacgag ggcgcgaacc tcgcgatccg
     1621 cgccgtgacg gccgcgatga aacgcgacgc tgtctccggc gaaggaatcg acgtggccct
     1681 catctccaaa gacggcttca agatgttcga cgacaaggaa gtcgagaagc gcaaggcaag
     1741 tatgaaactg gcctgagtcc cgcaagcggc tccggccaaa gtgatgtccg atgaccatcg
     1801 aggacattct gaacgacgcg cgaagcgtcg tgaagaaagt ggtccctgac cacgtggaaa
     1861 tcacgcaggt cgacttcgaa ggccccacga tcgtgatcta cacgaagaac atggaggtct
     1921 tcgcagagtc gaacgacctc gtgcgacaga tcgcccagca gctgcggcgc cggatcgtcg
     1981 tccgacccga cccgtccctg ctcgcaacgc cggaggaggc ggagaaggtc atccgcgagg
     2041 tgatcccgcc ggaagcgcag at
//
LOCUS       DATLMA010000555         1306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_658344, whole genome shotgun sequence.
ACCESSION   DATLMA010000555 DATLMA010000000
VERSION     DATLMA010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658344"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="VNA10_07160"
     CDS             complement(<1..773)
                     /locus_tag="VNA10_07160"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HVG37497.1"
                     /translation="MFPFAIVSALLAVAILAFLVPSVAAAPTPPYFGPNVQIDVPPVY
                     RASFFGPSPSIAAGTDGVVYLAFAGWSGSTTGDDIYFTKSLNGGRSWSTPMRVNDDAG
                     AAPQAQPNLALDSANNIYIAWTDMRNGNNDVYFSKSITGGLSFSANVRINDVTTNSQS
                     EPDLAVDPVNAHLVHAVWTDTRSAITGPDIFYANSTDGGLSFNPSLRVNDDVTGAEQG
                     QARIAVAPNRDVYVVWRDPRSAAKGPDIYFSKSSNLGAT"
     gene            1047..>1306
                     /locus_tag="VNA10_07165"
     CDS             1047..>1306
                     /locus_tag="VNA10_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014987617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HVG37498.1"
                     /translation="MAGGEVVVETFDSHVLKGNPLRDPTKRDVAIYLPPRYDSTKRYP
                     AAYGIVGYTGTGKMLLGVDPLGEDLKSRLDRLIRTGKMGPMIV"
BASE COUNT          233 a          396 c          441 g          236 t
ORIGIN      
        1 cacgtcgcgc cgagattgct cgacttcgag aagtagatgt ccggcccctt ggcggcgctc
       61 cgcgggtctc tccacacgac gtacacgtca cggttcggag ccaccgcgat gcgagcctgg
      121 ccctgttcgg caccggtcac gtcgtcgttg acccggaggc ttgggttgaa gctcagccca
      181 ccgtccgtgg aattcgcgta gaagatgtcg ggcccggtga tcgcgctgcg ggtatccgtc
      241 cagacggcgt ggacgaggtg cgcatttacg gggtcgaccg ccaggtccgg ttcggactgg
      301 ctgttcgtgg tcacatcgtt gatccgcaca ttcgcggaga acgagagccc gcccgtgatt
      361 gacttcgaga agtaaacatc gttgttgccg ttccgcatgt cggtccaggc gatgtagatg
      421 ttgttcgccg aatcgagcgc aaggttgggc tgcgcctgcg gggcggcgcc ggcgtcatcg
      481 ttcacgcgca tcggcgtcga ccaggagcgg cctccgttca aggacttggt gaagtagatg
      541 tcgtcgccgg tcgtcgagcc ggaccagccc gcgaaggcga ggtacacgac gccgtccgtc
      601 cccgcggcga tcgacggcga cggtccaaag aacgaggccc ggtacacggg cggcacgtcg
      661 atctggacgt tcgggccgaa gtacggcgga gtcggggcgg ccgcgacaga cgggacgaga
      721 aacgcgagga tggctaccgc cagaagagcg ctgacgatcg caaacggaaa cattcgtacg
      781 atcaatggcg caggtccgtg gggcactcca agcatcgcgt cgcgctcctg aggctcccgc
      841 ggttctcgcc agactattta atcggcgtga gccggatatc gaaatcgaaa acgagcttgg
      901 agggcgttcc gggatggccc tttactcgat tgctatcccg gactatcgca ctcatcttcc
      961 atatccagta gcgactcggc gaacccggtc tcgggctgag ccgttgactt aatgccctcg
     1021 gcgcggctcc cctcggcggg gtcggcatgg cgggaggaga ggtcgtcgtc gagacgttcg
     1081 attcgcacgt cctgaaaggg aatccgctgc gggacccgac gaagcgggat gtcgcgatct
     1141 acctgccgcc ccgatacgat tcgaccaagc ggtatcccgc ggcgtatggg atcgtcggat
     1201 acaccgggac cggcaagatg ctcctcggtg tcgatccgct cggcgaggac ttgaagtcga
     1261 ggctcgaccg tctcatccgg accgggaaga tgggccccat gatcgt
//
LOCUS       DATLMA010000556         1004 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_113003, whole genome shotgun sequence.
ACCESSION   DATLMA010000556 DATLMA010000000
VERSION     DATLMA010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113003"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VNA10_07170"
     CDS             complement(<1..228)
                     /locus_tag="VNA10_07170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37499.1"
                     /translation="MLNDTALRSTKAGLVALGIVSFALASFGPWFNLLLGYGLMVAAM
                     AVALAGIWWADRSAHEAHRNPALTNGIYAKSG"
     gene            complement(351..>1004)
                     /locus_tag="VNA10_07175"
     CDS             complement(351..>1004)
                     /locus_tag="VNA10_07175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37500.1"
                     /translation="LERRTSPAPPRSAFTPRERAIIDAASTPEKVQRWLESLPYNREE
                     HGETLHTFRGVVRANKVHCLEGALSAATILEQHGYPPILADMESQDDLDHVVLLFRRG
                     SKYGTVARSRDPGLHGRKPAFRSVRDLVFSYVDPFVDLTGRVEGYGVLDLRTLRVDWR
                     LSTWNVWAVQEALIRMPHRPLRTSDQRYRRWHERYVRYKQRHPEGRPVFYPDRHRWL"
BASE COUNT          193 a          306 c          336 g          169 t
ORIGIN      
        1 gcccgatttc gcgtagatcc cgttcgtcaa tgcggggttc cgatgcgctt catgggcaga
       61 gcggtccgcc caccagatgc cggcgagcgc caccgccatg gcagcgacca tgagcccgta
      121 tccaagaaga agattgaacc aaggaccgaa gctcgcgagc gcgaaggaca cgatgccgag
      181 ggccacgagc ccggctttcg tcgatcgcaa tgcggtgtca ttcaacaacg gaccctcgga
      241 gccgagggtc cggaggtcgt tcgctaccgg atcggacatg tcacggcatc acgagccgtc
      301 ctgatgactc cgaggaaaac gttaggaatg tgccgaaccg aagtcggaaa ctagagccag
      361 cggtggcggt ccgggtagaa gaccggtcgc ccctccggat gtcgctgctt gtatcggacg
      421 tatctctcgt gccaccgccg ataccgttga tcggaggtcc gcaatgggcg gtgcggcatc
      481 cggatcagcg cttcctgcac ggcccagaca ttccacgtcg agagtcgcca gtccacacga
      541 agggtgcgca ggtcgaggac tccatatcct tcgacgcggc ccgtgagatc gacgaatggg
      601 tcgacgtacg agaagacgag atcccggact gagcggaagg cgggcttccg tccgtggagc
      661 cccggatccc gcgatcgcgc aactgtgccg tacttcgagc cgcgacggaa cagcaggaca
      721 acgtggtcga ggtcgtcctg ggattccatg tcggcgagga tcggaggata tccgtgctgc
      781 tcgaggatcg tcgcagcgga cagagccccc tccagacaat ggaccttgtt cgcccggacg
      841 acaccgcgaa aggtgtggag cgtctcgccg tgttcttcgc ggttgtaagg cagcgactcg
      901 agccatcgct gcaccttttc cggcgtgctg gcggcatcga tgatggcgcg ttctcgcggg
      961 gtgaacgccg agcgcggcgg ggcgggactc gtgcgacgtt ccag
//
LOCUS       DATLMA010000557         1024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_895091, whole genome shotgun sequence.
ACCESSION   DATLMA010000557 DATLMA010000000
VERSION     DATLMA010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895091"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..>1024
                     /locus_tag="VNA10_07180"
     CDS             71..>1024
                     /locus_tag="VNA10_07180"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF013461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HVG37501.1"
                     /translation="MASVEVISPRTIRAKKILKDLTREELRELARPGEKTSEYGSPVY
                     ATRVKNRSAKNTYVVSNSVPIGVMQQPIERDRAEETIRQVQENLAGMELIQVDRRMGM
                     NPDVPIHCRLYVPKEYARIAFMWHNMLFPSDSSAEPDFISVYVPDWKERLIFLDVDQG
                     YTYILGTDYPGEAKKSMLRQAMYWIKRRGGLGLHAGSKVLRVVGPDGKLRDVGFLLFG
                     LSGTGKTTLTLHDHGLKEPERAIIKQDDVVLMTPEGEAFGTEDGFYIKTEGLEPSQTV
                     LWGAATNPTAVYENIKLDENGKVDFLDTSITSNGRGVVLRKY"
BASE COUNT          211 a          329 c          314 g          170 t
ORIGIN      
        1 ctaacgcttc ttggtaggat tgatgcccct ttttgcggac tggaccggcc ggtgaccgaa
       61 aggaagatca atggcctctg ttgaagtcat ttccccccgc accattcgcg caaagaagat
      121 cctgaaagac ctgacgcgag aggagcttcg cgagctcgcc cgcccgggag agaagaccag
      181 cgagtacggc tccccggtgt acgccacccg cgtcaagaac cgctccgcga agaacaccta
      241 cgtcgtctcg aacagcgttc cgatcggcgt catgcagcag ccgatcgagc gcgaccgcgc
      301 cgaggagacg atccggcagg tccaggaaaa tctcgccggg atggagctca tccaggtcga
      361 ccgccggatg gggatgaacc cggacgtgcc gatccactgc cgactctacg ttccgaagga
      421 gtacgcccgc atcgccttca tgtggcacaa catgctcttt ccctccgact cgtcggcgga
      481 gccggatttc atttccgtct acgtgcccga ctggaaagag cggctgatct tcctcgacgt
      541 ggaccagggt tacacgtaca tcctcgggac cgactatccc ggcgaagcga agaaatcgat
      601 gctccggcag gcgatgtact ggatcaagcg gcgaggcggt ctgggtctgc acgccggttc
      661 caaggtcctg cgcgtcgtcg gaccggacgg caagctccgc gacgtcggtt tccttctttt
      721 cggcctctcc ggaacgggga agacgacgct gaccctccac gaccacggcc tgaaggagcc
      781 ggagcgcgcg atcatcaagc aggacgacgt cgtcctgatg acccccgagg gagaggcgtt
      841 cgggaccgag gacggcttct acatcaagac cgaagggctc gagccttcgc agaccgtgct
      901 ctggggcgcc gccacgaacc cgaccgcggt ctacgagaac atcaagctgg acgagaacgg
      961 gaaggtcgac ttcctcgaca cgtcgatcac ctccaacggc cggggagtgg tcctgcgcaa
     1021 gtac
//
LOCUS       DATLMA010000558         2065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_55772, whole genome shotgun sequence.
ACCESSION   DATLMA010000558 DATLMA010000000
VERSION     DATLMA010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55772"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..785
                     /locus_tag="VNA10_07185"
     CDS             240..785
                     /locus_tag="VNA10_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTPase"
                     /protein_id="HVG37502.1"
                     /translation="MGEALKIGITGLPGAGKTYCLLKVIEMLEGDGLKVGGMITEPIV
                     KRNRREGFYVMDWATKEKRVFASREITSKTMVGRFGVDISALEEVGVNALRGATANAD
                     VIVIDEVGKMEVESPNFVLAVKDALEADKPLLLTLHKKSRNPLLQDIRRRDDVRILEV
                     TMVNRNLLPYKIVKLMKGEVL"
     gene            825..1925
                     /locus_tag="VNA10_07190"
     CDS             825..1925
                     /locus_tag="VNA10_07190"
                     /inference="COORDINATES: protein motif:HMM:NF014103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37503.1"
                     /translation="MEFPFPVAPVSEGAANLLVPDIARRKGPGTAGPWPFYNPTMAVN
                     RDLSAIVLAKWPGPLRSVLDGLAATGAWGIRMALETRADRVMFNDWSPEATRLIRENV
                     RRNGLVASVRRSDLRSLLGEGRYDFVDVDPFGPPTPFLASAFDGVKESTGFGITATDT
                     AVLCGTYPKACKKRYGARPLRSPQGAEIGLRILLGYCARIAEERDLRIRPILAFSAEH
                     FLRAVVTVSSGSTPPPLGYVAAGETGPLIPTTAANRNAVGPLWLGPLGDAAVVRELQP
                     SAWTSVVSARLLSLLKTECEMPAFFLTTDELAAREHRSPPRLDRLIEGLRAIGHRATR
                     THFHPRGVKTDAPPDECARLFRDLSPTGSTDG"
BASE COUNT          358 a          665 c          672 g          370 t
ORIGIN      
        1 gtgaacgcgt gggtcgtctc gagacccgcg gcgacgaacc atccgtaggc ggccccgatc
       61 aggccgacga acaggaggac gaggccgatg acgaagaccg cgactttcac gcgtccctcg
      121 cgtccgaacg gagccctcgg cttatcacct ttgtcctccg ggaaccgagt tcctcccgat
      181 gcggtgacat aaagactctt ttatagcgca acggatattt ctgacgccgc gtgggtggca
      241 tgggcgaggc gctcaagatc gggattacgg gcctccccgg ggccggcaag acctactgcc
      301 ttctcaaggt catcgagatg ctcgagggcg acggcctcaa ggtcggcggc atgatcaccg
      361 agccgatcgt caagcggaac cgccgcgaag gattctacgt catggactgg gcgacgaaag
      421 aaaagcgggt gttcgcctcc cgcgagatca cgtcgaagac gatggtcggc cggttcggtg
      481 tcgacatcag cgccctcgag gaggtcggcg tgaacgcgct gcggggggcg accgccaacg
      541 cggacgtcat cgtgattgac gaggtcggga agatggaagt cgagtcgccg aacttcgtgc
      601 tcgcggtgaa ggacgccctc gaagcggaca agccgctcct cctcacgctc cacaagaagt
      661 cccgcaatcc gttgctccag gacatccgcc gtcgggacga tgtgcggatc ctcgaggtca
      721 cgatggtgaa tcgcaacctc ttgccgtaca agatcgtgaa attgatgaag ggcgaggtcc
      781 tctgaggacg aaggcctaat ccggtctgcc cgtatcgcga cgccgtggag tttccgtttc
      841 ccgtcgcacc ggtgtcggag ggagccgcga acctcctcgt tccggacatc gctcggcgca
      901 aaggacccgg gaccgccggg ccgtggccgt tctacaatcc gacgatggca gtgaaccgcg
      961 acctgagtgc gatcgtgctg gcgaagtggc ccggtccgct tcgatccgtc ttggacggac
     1021 tcgcggcaac cggcgcttgg gggattcgga tggccctcga aacccgtgcg gatcgcgtca
     1081 tgttcaacga ttggtcgccc gaggcgactc ggctgatccg ggagaacgtt cgccgcaacg
     1141 ggttggtggc gagtgtccgc cggagtgact tgcgctcgct cttgggcgag gggcggtacg
     1201 acttcgtgga cgtcgatccg tttggccctc cgactccatt cctcgcctcc gcgttcgacg
     1261 gcgtcaagga atcgacagga ttcgggatta ccgccactga caccgctgtt ctgtgcggga
     1321 cttatccaaa ggcctgcaag aaacggtacg gtgcccgacc tcttcgctcc ccgcaaggcg
     1381 cggagattgg ccttcgaatc ctgctcggct actgcgctcg gatcgcggag gagcgagacc
     1441 tccggatccg acccatcttg gcgttctccg ctgaacactt ccttcgggca gttgtcacgg
     1501 tttcgtcggg ctcgaccccg cctccacttg gctacgtcgc cgccggcgag accggtccct
     1561 tgatcccgac aaccgcagcg aatcgcaacg cggttggtcc gctatggctg ggccctctcg
     1621 gggacgccgc agtcgtccgc gagcttcagc cctccgcgtg gacctctgtc gtgtccgcga
     1681 ggctcctctc gctcctcaag accgagtgcg agatgccggc cttcttcctc acgacggacg
     1741 aactcgcggc tcgtgagcat cgatcaccgc cacggctcga tcggctcatc gagggcctgc
     1801 gggcgatcgg ccatcgggcg acccggaccc atttccatcc gcgcggcgtc aagacggacg
     1861 cgccgccgga cgagtgcgcc cgtctgttcc gcgatctttc gcctaccgga tccacggatg
     1921 gttgagggcc tgccaactga agccgaacgc cgcctcgctg tcggtcgcgt agtggtagag
     1981 cgtcgtaacg aggattccgt gcacgacgga ccagagggcg ctgaggatga gccagtacag
     2041 gactgcggcg acgggccatc cgagg
//
LOCUS       DATLMA010000559         1263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_659794, whole genome shotgun sequence.
ACCESSION   DATLMA010000559 DATLMA010000000
VERSION     DATLMA010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659794"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VNA10_07195"
     CDS             complement(<1..219)
                     /locus_tag="VNA10_07195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37504.1"
                     /translation="MLIEFPILTYIVLLPAVGALFTYLTGSDRAARAVALAFSLVVLG
                     LSTVLLMGFLWPNVMSLPTMTTAGNHTYF"
     gene            complement(220..>1263)
                     /locus_tag="VNA10_07200"
     CDS             complement(220..>1263)
                     /locus_tag="VNA10_07200"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HVG37505.1"
                     /translation="FTHVGFVIMLIGIFTLYFNSAGVNNAVYGNPANTLDMTAFLHGA
                     LRHETGGLATYLSLALQIPIFAVFLFGFIVKLPSFPFHTWLPDAHVEAPTGGSVLLAG
                     VLLKMGGYGIFRINFGMLPDAARSLWWVLAILGTVSMVYAAFVCLAQVDLKRLIAYSS
                     VGHMGFVLLGASSLTVIGVQGAIFQLFNHGIITAILFMLAGSVKHATGTRDIPDLQGL
                     AKVMPQFSLILAIGFFASLGLPGLNSFWSEFMVFVGAYGSPNLGEMRRLIIIPLISIV
                     VTAAYYVYTMQRILFGDVPEKLGHSHDLLPWERVSYVVLVALVFLVGFFPVPFLGMIN
                     AYTSASFPWLGGL"
BASE COUNT          285 a          358 c          440 g          180 t
ORIGIN      
        1 gaagtatgtg tggttcccgg cggtcgtcat cgtcgggaga gacatcacgt tcggccagag
       61 gaatcccatc agaaggacgg tggacaagcc gaggacgaca agtgagaatg cgagcgcgac
      121 ggcccgcgcg gcgcggtccg atcccgtgag gtacgtgaag agggccccga ccgcgggcaa
      181 caggacgatg tacgtcagga tcgggaattc gatcagcatc tagaggcctc ccaaccaggg
      241 gaacgaggcg ctcgtgtacg cattgatcat cccgaggaac ggcaccggga agaagccgac
      301 gaggaagaca agggccacca ggacgacgta cgagacgcgc tcccagggga ggaggtcgtg
      361 cgaatgcccg agcttttcgg gcacatcccc gaagaggatg cgctgcatcg tgtacacgta
      421 atatgcggcc gtcacgacga tcgagatcag cgggatgatg atcagccggc gcatctcacc
      481 gagattcggc gatccgtacg caccgacgaa gaccatgaac tcggaccaga acgaattgag
      541 gccgggcaat ccgagcgacg cgaagaaccc gatcgccagg atgagggaga attgtggcat
      601 gactttcgcg aggccctgga ggtcgggaat gtcgcgcgtc ccggtcgcat gcttcacgga
      661 tccggcgagc atgaacagga tcgcggtgat gatcccgtgg ttgaagagct ggaagattgc
      721 cccttggacg ccgatgaccg tgaggctgga cgccccgagg agcacgaacc ccatgtggcc
      781 cacggagctg tacgcgatca ggcgcttcag gtcgacctgt gcgaggcaca cgaacgccgc
      841 gtagaccatc gacaccgtcc cgagaatcgc gaggacccac cagagcgatc tcgcggcgtc
      901 cgggagcatg ccgaagttga tccggaagat cccgtagccg cccatcttca gcaggacgcc
      961 ggccaggagg acggagcccc cggtcggcgc ctcgacgtgg gcgtcaggca gccacgtgtg
     1021 gaaggggaag gacggcagct tgacgatgaa gccgaacagg aagacggcga agatcgggat
     1081 ctgcagggcg agggagaggt acgtcgcgag cccgccggtc tcgtggcgca acgcgccgtg
     1141 gaggaacgcg gtcatgtcga gcgtattcgc ggggttcccg tacaccgcgt tgttcacgcc
     1201 ggcgctgttg aagtacagcg tgaaaatccc gatgagcatg atcacgaatc ctacgtgggt
     1261 gaa
//
LOCUS       DATLMA010000560         1269 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_297533, whole genome shotgun sequence.
ACCESSION   DATLMA010000560 DATLMA010000000
VERSION     DATLMA010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297533"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..135)
                     /locus_tag="VNA10_07205"
     CDS             complement(<1..135)
                     /locus_tag="VNA10_07205"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HVG37506.1"
                     /translation="MSAIVTLTTDFGAGEYIGAMKGAILTVDPEATIVDIDHSIRPHD
                     I"
     gene            complement(149..>1269)
                     /locus_tag="VNA10_07210"
     CDS             complement(149..>1269)
                     /locus_tag="VNA10_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37507.1"
                     /translation="RATKRMEKLAKDLAAKDRKVSEEEREARERQIDIRRRQRDLATR
                     GKALDQLKRRLDRMDEELSTNRSKMKAQAVKLLRSERAAQQRLRTIETAERDLDKREA
                     SAKRREATIEKREKSAATAEERTAERSDAAEVVEGDLRSRRAALEEEYAAKQAELEKR
                     ESEVGAAERALTKESESVESLKATLEEQETAFLSDLQDIETRKAALVKSEASHSEETK
                     KLEKRSDAVASRESRSKQEVQSREAAIEAREGELEALEAALREREEGLQHRIDEVEDR
                     ESAAEKRVTRAETDGKRRQESIAAQRKGLEERLAKLATERDRIGAERIALQTAQTALK
                     TRETKLKDREARATKADGELARRKKELARIKEGLRRLS"
BASE COUNT          136 a          449 c          361 g          323 t
ORIGIN      
        1 gatgtcgtgg ggccggatcg aatgatcgat gtccacgatc gtggcctccg gatcgacggt
       61 gaggatcgcg cccttcatcg ccccgatgta ctcgcccgcc ccgaagtccg tggtcaaggt
      121 gacgatcgcg ctcattcgtt cgactccgtc agctcaggcg tctcaggcct tctttgattc
      181 gggcgagttc cttctttcgg cgggcgagct cgccatccgc cttcgtcgcg cgggcctcgc
      241 ggtccttcag ctttgtttct cgtgtcttga gggccgtctg ggctgtctgc aacgcaatcc
      301 gttccgcccc aattcgatcg cgctccgtcg cgagtttcgc gaggcgttcc tcgaggccct
      361 tgcgttgagc ggcgatggac tcctgtcgtc gcttcccgtc cgtctcggca cgcgtcactc
      421 gcttttccgc cgcggattcg cggtcttcga cctcgtcgat ccgatgctgc aggccctctt
      481 cccgctcgcg cagcgcggcc tccagcgcct cgagctcacc ttcgcgcgcc tcgatcgcgg
      541 cttcgcggct ttggacctct tgtttggacc gggactcgcg actcgctacc gcatcggacc
      601 gtttttcgag cttctttgtc tcctccgaat gcgaggcctc ggacttcacc agagccgcct
      661 tccgcgtctc gatgtcctgc aggtccgaga ggaacgcggt ctcctgttcc tccaacgtgg
      721 ccttcaacga ctcgaccgat tcggattcct ttgtgagggc tcgttccgcg gcgccgacct
      781 cgctctcccg cttttcgagt tcggcctgct tggcggcgta ctcttcttcg agcgcggccc
      841 gtcgggatcg caaatcccct tcgacgacct cggccgcgtc ggaccgttcc gcggttcgct
      901 cttcggcagt tgctgcggac ttctcgcgtt tctcgatcgt ggcctcccgg cgttttgccg
      961 acgcttcccg cttgtccagg tcacgttcgg ccgtctcaat tgtccggagc cgctgttgag
     1021 cggctcgctc cgatcgaagc aacttgacag cttgtgcctt catcttcgag cgattggtgg
     1081 agagttcctc gtccatccgg tcgagccggc gcttcaactg gtcgagcgcc ttcccgcgtg
     1141 tcgcgagatc ccgctgtcgt cgccgaatgt cgatctgtcg ctctcgcgct tcgcgttcct
     1201 cttccgagac cttccgatcc ttggccgcca ggtccttcgc gagcttttcc atccgttttg
     1261 tcgcccgtt
//
LOCUS       DATLMA010000561         1632 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_536712, whole genome shotgun sequence.
ACCESSION   DATLMA010000561 DATLMA010000000
VERSION     DATLMA010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536712"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..847
                     /locus_tag="VNA10_07215"
     CDS             <1..847
                     /locus_tag="VNA10_07215"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HVG37508.1"
                     /translation="LKLQPAGGEPFDGALTGARVPVEHSFALAWSVRDIRKRTRVERK
                     LKESEQQYLSLYRQMLASRDELRIFADRSLHAREEESRRIARELHDEVGQMTTSIHLA
                     LAEIGAALPEADRGRLETVHGLLDALEERLRRLSHELRPTILDDLGLRPALEFLTEGF
                     AARTGISSSVEGSTKGRLEPLIETAVYRIVQEALTNIARHAGAAHASIRISREPQALR
                     CSIRDDGVGMSIDPATDGASGRRGLGLLGIRERLDALGGKFKLRSRPGGGTEVLVTVP
                     IGGTG"
     gene            844..1476
                     /locus_tag="VNA10_07220"
     CDS             844..1476
                     /locus_tag="VNA10_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007418773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HVG37509.1"
                     /translation="MTCRVLIAEDHVVVRQGLKALLEREKFEVVAEASDGREATRLTR
                     ELVPDVAILDLAMPQLNGIDATRAIRESCPQVRTIALTMYAEDQYVLAALHAGFHGYV
                     LKSQAASHLVRAIQEVCRGEIYLSPAVSRVVVDAYLGRKSLPEDPLTQREREVLQLVA
                     EGKTTKQIAQTLGISAKTAESHRTRIMRKLEIHDTAGLVRYAIRRGVIQA"
BASE COUNT          285 a          512 c          569 g          266 t
ORIGIN      
        1 tttgaagctg cagccggcag gcggcgagcc cttcgacggg gctttgacgg gagcgcgcgt
       61 tccggtcgaa cactcgttcg cgctcgcgtg gtccgtgcga gacatccgaa agcgcacgcg
      121 cgtcgaacgc aagctgaagg agagcgagca gcagtacctg tcgctctacc gccagatgct
      181 cgcgagccgc gacgaactcc ggatctttgc ggatcggtcg cttcacgcgc gagaagagga
      241 gtcccgccgg atcgctcgcg agctccatga cgaagtgggc cagatgacga cttcgatcca
      301 tctcgcgctc gccgagatcg gagcggcgct gccagaggcc gaccgtgggc gactcgagac
      361 cgtgcacggc cttctcgacg cgctcgagga gcgactgcgg cggctgtctc acgagttgcg
      421 gccgacgatc ttagacgacc tcgggttgag gccggccctc gagttcctga cggagggttt
      481 tgcggcgcgg accggaatct cctcatcggt cgaaggttcg acgaaaggac gcctcgagcc
      541 gctgatcgag accgccgttt accggatcgt gcaggaggcg ctgacgaaca tcgcacgaca
      601 cgcgggggcg gcgcacgcgt cgattcggat ttcccgtgag ccccaagcgc tccgctgttc
      661 gatccgggac gacggggtcg ggatgtcgat cgatccggcc accgacggag cttcgggacg
      721 ccgggggctc ggtctactcg ggattcggga gcggctggat gcgctcggcg gaaagttcaa
      781 gctgcggtca cggccgggag gcgggaccga ggtcctggtg accgttccga tcgggggcac
      841 gggatgacct gccgagtctt gatcgccgag gaccacgtgg tcgtccggca gggattgaag
      901 gccctgctcg agagggagaa gttcgaagtg gtggcggagg cgtcggatgg acgcgaagcg
      961 acacggctga cgcgcgagct cgtgccggac gtcgcgatcc tcgacctggc gatgcctcaa
     1021 ctgaacggga tcgacgcgac gcgggcgatc cgcgagagct gcccgcaagt ccgcaccatt
     1081 gcgctgacca tgtacgccga ggaccagtac gtgctcgcgg ccctgcacgc agggttccac
     1141 ggatatgttc tcaagtcgca ggccgcctct catctcgtgc gggcgatcca ggaggtctgc
     1201 cgtggcgaga tctatctctc ccccgcggtc tcccgcgtcg tcgtggacgc ctacctggga
     1261 cgcaagtcgc tgccggaaga tcctctgacg cagcgcgaac gcgaggtcct tcagctcgtc
     1321 gcggaaggca agacgaccaa gcagatcgct cagactctgg gcatcagcgc caagacggcc
     1381 gagtcgcacc gaacccgcat catgcggaag ctcgagatcc acgacacggc ggggctcgtc
     1441 cgctacgcga tccgccgcgg cgtgatccag gcgtagattc gggttcttcc ccgaccggac
     1501 gtcaggggtt ttcccccctg cggtgccggg atttgccgga ttgtccgatc cccgtacggc
     1561 ggctagggtt gcctgtgcca tggtcatgga agaggttcga aacactcaac caaaggaggc
     1621 agacacgatg ga
//
LOCUS       DATLMA010000562         1210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_234738, whole genome shotgun sequence.
ACCESSION   DATLMA010000562 DATLMA010000000
VERSION     DATLMA010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234738"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VNA10_07225"
     CDS             <1..266
                     /locus_tag="VNA10_07225"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HVG37510.1"
                     /translation="RILPGVTRAAALEAAAGFGFAIEERPIAVDELFSSEEVFLASTT
                     LWTYSLVEIEGRTVGNGRPGSAAARIREKLQAEFRGARVGLAT"
     gene            284..667
                     /gene="queF"
                     /locus_tag="VNA10_07230"
     CDS             284..667
                     /gene="queF"
                     /locus_tag="VNA10_07230"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020262079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HVG37511.1"
                     /translation="MTEYTEEHAKSGLDAELPGIETWPNQHPDYEIAVEIPEYNAICP
                     KTGLPDFGHLTIRYVPDALCLELKSLKLYIVAYRNVGIFYENAVNRILSDCVAACRPK
                     RMTVTGRFSSRGGISSVVEARYPAA"
     gene            671..>1210
                     /locus_tag="VNA10_07235"
     CDS             671..>1210
                     /locus_tag="VNA10_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013563115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HVG37512.1"
                     /translation="MDWLKELFHKLTDVETLIRVGGLTAMTAIVFAETGLMVGFFLPG
                     DSLLVTAGVFAAAGQLNIWTLNALLVVAAIAGDTVGYWFGRRVGQALFKRPKSLLFNP
                     AHLRRAHDFYEKHGGKTIILARFMPVVRTFAPVVAGMGGMEYHRFLFFNVFGGALWVI
                     SMTLAGYFLGQVAFVQRHFE"
BASE COUNT          195 a          402 c          390 g          223 t
ORIGIN      
        1 cgcgcattct gcccggggtc acccgcgccg ccgcgctcga ggccgccgcg ggtttcggct
       61 tcgcgatcga ggagcggccg atcgcggtcg acgagctctt ctcttccgaa gaagtctttc
      121 tcgcttcgac gacgctgtgg acttactcgc tcgtcgagat cgagggacgc acggtcggaa
      181 acggacggcc cggttcggcc gccgcacgga tccgcgaaaa gctccaggcg gagtttcgcg
      241 gagcgcgcgt cgggctcgcg acttagacga gccgacccga gcgatgacgg agtacacgga
      301 ggagcacgcg aagtccgggc tcgacgccga gctgcctgga atcgagacct ggccgaacca
      361 gcatcccgac tacgagatcg ccgtcgagat cccggagtac aacgcgatct gtcccaaaac
      421 gggcttgccg gacttcggac acctgacgat ccggtacgtg cccgacgcgc tctgcctgga
      481 gctgaaatct ctgaagctct acatcgtcgc gtatcgcaac gtcggcatct tctacgagaa
      541 cgccgtgaac cggatcctct cggattgcgt agcggcctgc cggccgaagc gcatgaccgt
      601 gacggggcgg ttctcttcgc gaggcgggat ctcttccgtc gtcgaagcgc gatacccggc
      661 cgcctgaccg atggactggc tgaaagaact cttccacaag ctcaccgacg tcgagacgct
      721 catccgcgtc gggggcctga ccgcgatgac ggcgatcgtc ttcgcggaga ccgggctcat
      781 ggtcgggttc ttcctgcccg gggactcact gctcgtgacg gcaggggtct tcgccgccgc
      841 cggccagctg aacatctgga cgttgaacgc gctcctcgtc gtcgccgcaa tcgcgggaga
      901 taccgtgggc tactggttcg gccggcgcgt cgggcaggcc ctcttcaagc ggccgaagtc
      961 actcctcttc aaccccgctc atctccggcg cgcccacgac ttctacgaga agcatggcgg
     1021 caagacgatc atcctcgcgc gcttcatgcc ggtcgtccgg acgttcgctc ccgtggtggc
     1081 gggaatgggc ggcatggagt accaccgctt cctctttttc aatgtcttcg gcggagcgct
     1141 ctgggtgatc tcgatgaccc tggcgggcta tttcctcggg caggtggcgt ttgtgcagcg
     1201 ccacttcgag
//
LOCUS       DATLMA010000563         2666 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_660524, whole genome shotgun sequence.
ACCESSION   DATLMA010000563 DATLMA010000000
VERSION     DATLMA010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_660524"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..763
                     /locus_tag="VNA10_07240"
     CDS             32..763
                     /locus_tag="VNA10_07240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37513.1"
                     /translation="MASNLDFLVAFLMGILPGLAILWASLRRFDRPYVDHTLFDDRRV
                     FGSLAVGLIFGTVASIFAIVLPRGDLASFAVAVAVSFVFEESFKLVWLNRRSYRGRFD
                     TTFYGVPLGIGAAASGVVAAAWASRAILYVPETFVLLILYSISLGLVNADTGALIGFG
                     ASRGDTWRAFLRAVGVRLAHGAFLSPFLLQVDEPYAALSVVTSMGFALLIYYYVYREI
                     LPGTLPDDIRRELRRERRRAPAARD"
     gene            complement(753..1229)
                     /locus_tag="VNA10_07245"
     CDS             complement(753..1229)
                     /locus_tag="VNA10_07245"
                     /inference="COORDINATES: protein motif:HMM:NF020648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1922 domain-containing protein"
                     /protein_id="HVG37514.1"
                     /translation="MYGVVVCPRCKRVKGVNLKQKTTTCQCGFEIHVVPARIRARAET
                     ARELAPLVGKVSAELAGGTEEYRRAQAPVRRRRSRDVHVRVIAVAGKGRDRTSRVRSA
                     AIELTRELELFSLSDWERVLAGLGIPHPDEALATLVEENTVFEPKAGFFRAVVLNP"
     gene            complement(1232..1699)
                     /locus_tag="VNA10_07250"
     CDS             complement(1232..1699)
                     /locus_tag="VNA10_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvoyl-dependent arginine decarboxylase"
                     /protein_id="HVG37515.1"
                     /translation="MLPIPTKFFVTSGKAVSKVSDLNAFDEALQNAGLAEQNIVSVSS
                     VLPVGIRPVRRRDLPMGAITHCVLAQQRGGEGETISAGIAYGFRDDDYGGYVAEGHMH
                     GTKNSLREVMEWKMGEMAKLRGIKFRRIDYRIEDLSIPMDHYGACLAALVFLA"
     gene            complement(1797..2285)
                     /locus_tag="VNA10_07255"
     CDS             complement(1797..2285)
                     /locus_tag="VNA10_07255"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HVG37516.1"
                     /translation="MFRVAGPDDLDGLYRFEILCFREHRFRRDHVDWILRNERALTLV
                     EDGRKAVTAAMMLLFEGHVCRVLSVAVAPKARRHGIGTRMMQAAEAVCRERGLSTIRL
                     EVSTTNLVAIEFYRRLGYRTDGVLYGYYSWGEDAYSMHKAIVPTSAPAGTPPLTAASH
                     LT"
     gene            2426..>2666
                     /locus_tag="VNA10_07260"
     CDS             2426..>2666
                     /locus_tag="VNA10_07260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37517.1"
                     /translation="MLIFGYLVFFLFGFGALFISLGLVILRRGRLGNYFRFRKPMAAA
                     VTALVVGSVAASAGVGITISLWTEQSTTSMYYRVAV"
BASE COUNT          430 a          874 c          828 g          534 t
ORIGIN      
        1 taagtagcgc accggccttc gcacaccatc gatggcctcg aacctggatt ttctcgtcgc
       61 gtttctgatg ggaatcttgc ccggactggc catcctttgg gcctcgctcc gccgcttcga
      121 tcggccctac gtggaccaca cgctgttcga cgaccgccgc gtcttcggaa gcctcgccgt
      181 cggtctcatc ttcgggaccg tcgcgagcat cttcgccatc gtcctgcccc gcggggatct
      241 cgcgtcgttc gcggtcgccg tcgcggtcag ctttgtcttc gaggagtcat tcaagctcgt
      301 ctggctgaac cgccgtagct accgcggtcg cttcgacacg accttctacg gcgtgccctt
      361 ggggatcgga gcggcggcga gcggggtcgt ggcggcggcg tgggcgtcgc gggcgatcct
      421 ctacgtgccg gagacgttcg tgctgctcat cctctactcg atcagcctcg gtctggtgaa
      481 cgccgacacg ggggcgttga tcggcttcgg agcatcccgg ggcgacacgt ggcgcgcatt
      541 cttgcgggcc gtcggcgtgc gcctcgcgca cggagcgttc ctctctccct tcctcctcca
      601 ggtcgacgaa ccgtacgcgg ccctttccgt cgtcacgtcg atggggtttg ccctcctgat
      661 ttactattac gtctaccggg agattctgcc gggcacgctg cctgacgaca tccgtcggga
      721 actgaggcgg gagcggcgcc gcgcgccagc ggctagggat tgaggaccac ggcccggaag
      781 aaaccggcct tcggttcgaa gacggtattc tcctcgacca gtgtcgcgag ggcttcgtcg
      841 ggatgcggga tccccagacc ggcgaggacc cgttcccagt ccgagaggga gaagagctcg
      901 agttcccgcg tgagctcaat cgcggcggat cgcacgcggc ttgtgcggtc gcgtcccttc
      961 ccggcaacgg cgatgacgcg aacgtggacg tcgcgggatc gcctccgacg gaccggcgcc
     1021 tgggcccgcc gatactcctc ggtgccaccc gcgagttccg cgctcacctt cccgacgagc
     1081 ggcgcgagct cccgcgcggt ctccgctcgg gcccgtatcc gcgctgggac gacgtgaatc
     1141 tcgaacccac attgacacgt ggtcgtcttc tgcttgagat tcacaccttt cacgcgcttg
     1201 catcgcgggc agacgacgac tccgtacatg ctcatgcgag aaacacgagc gccgccaggc
     1261 aagcgccgta gtggtccatt gggatgctca ggtcctcgat ccggtagtcg atccgacgga
     1321 acttgatccc gcgcagcttc gccatctccc ccatcttcca ctccatcacc tcgcggagcg
     1381 aattcttggt cccgtgcatg tggccttcgg cgacgtatcc gccgtagtcg tcgtcccgga
     1441 agccgtacgc gatgcccgcg gagatcgtct cgccctcccc gcctcgctgc tgggcgagga
     1501 cgcagtgggt gatcgcgccc atcggcaggt ccctccgtcg gaccggtcgg atgcccacgg
     1561 ggaggaccga cgagacggac acgatattct gctccgctag tcccgcgttt tggagcgcct
     1621 catcaaacgc attcaggtcc gagaccttcg agaccgcttt gcccgacgtg acgaagaatt
     1681 tcgtgggaat cggcaacatg tgctctgcga acgcgccgca ttgccgacgg agacttaagg
     1741 gtttgcgaaa cggcgtcgag ccgaccgacg gaataatatc gggatattat tatttatcag
     1801 gttagatggc tcgccgccgt caacggaggc gtcccggcgg gggcggacgt cgggacgatt
     1861 gctttgtgca tgctgtaggc gtcctcgccc catgagtaat atccgtacaa gacgccgtcc
     1921 gtgcgatagc cgagtcgtcg gtagaattcg atggccacga ggttcgtcgt actcacttcg
     1981 agtcggatcg tcgagaggcc tcgttcgcgg cacacggcct cggcggcttg catcatccgc
     2041 gtcccgatgc cgtgtcgccg agccttcggg gcgaccgcca ccgagaggac gcggcacaca
     2101 tgaccttcga aaaggagcat catcgccgcg gtcaccgctt tccgaccgtc ttccacgagc
     2161 gtgagggccc tctcgttccg caggatccaa tccacgtggt cccggcggaa ccggtgctct
     2221 cggaagcaga ggatttcgaa tcggtacagc ccgtcaaggt catcgggccc ggcaacgcgg
     2281 aacaaggcgc ggtcaaaccg cgcacgaggt tattgtcctt ttcgacaccg gtgagagcca
     2341 caaacatggc ccttgccagc ggacgctcag tcgcccgact aacattttcg gcaactagaa
     2401 gcggcatcaa actaattcgg ccccagtgct gattttcgga tatctggtct tctttctctt
     2461 cgggttcggg gcgctcttca tttctctcgg gttggtcatc ttgaggaggg ggcgactggg
     2521 caattacttc cgattccgga aacctatggc tgcggccgtg acagcgctgg tggtcggctc
     2581 cgtggcggcc agcgcgggcg tcggaatcac catctctctc tggaccgaac agagcacaac
     2641 atcgatgtac taccgcgtcg cagtgc
//
LOCUS       DATLMA010000564         1883 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_536983, whole genome shotgun sequence.
ACCESSION   DATLMA010000564 DATLMA010000000
VERSION     DATLMA010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536983"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VNA10_07265"
     CDS             <1..218
                     /locus_tag="VNA10_07265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37518.1"
                     /translation="MHITAEIHPGRREEAVELGSAARGLDLLRALRLAPDAHILIRGD
                     APLPADSALQDGERIRVIGVVSGGALG"
     gene            215..802
                     /locus_tag="VNA10_07270"
     CDS             215..802
                     /locus_tag="VNA10_07270"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HVG37519.1"
                     /translation="MTAILVLVRHGEIVRPPYTSNFDRAPLSRRGEDQIRNLVGAWPG
                     SRPAAIFTSPLRRSIESAIILADAFGLSISKRPCLKEWSADESGIPQPEYAALEKKAW
                     ADQDYIPPSKESLSQAAVRGTRCLEDIAKSSDDQTVAVAGHGTLFSLVTASLKGQRPS
                     EEYKNSIGFGAAAIVEAGSGLRLISDFRTYGSVSA"
     gene            857..>1883
                     /gene="gcvPA"
                     /locus_tag="VNA10_07275"
     CDS             857..>1883
                     /gene="gcvPA"
                     /locus_tag="VNA10_07275"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF001696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HVG37520.1"
                     /translation="MPSDEDEMLREMGLRSVDDLFADIPAGVRIPKLDIPDGLPEDRV
                     VARVTSMLAANRTVVDMPTFLGGGLYDHFVPASVRAIVSRSEFYTSYTPYQREISQGL
                     LQALWEYQSLICELTGMDAANTSMYDGSTALGEAARMAHRIYGGRIFLIPRALRHNRR
                     AVLANYVLGTGIEVREVDYDRESGMLDLAKLKAALSPDVCGVYVENPNFFGRFEEQLE
                     EIRAMTNGVLVVGVNPIAQAVVRPPGDFAADIVVGEGQPLGTQMNFGGPLLGIFACRQ
                     AHIRKMPGRVIGLTRDAKGHRAFCMTLQTREQHIRREKAMSNICTNESLLAVAAAAYM
                     AVLGSNGL"
BASE COUNT          334 a          617 c          608 g          324 t
ORIGIN      
        1 caatgcacat caccgcggag atccaccccg gtcggaggga ggaagccgtc gaactggggt
       61 ccgctgccag aggtctcgat ctcttgcggg cccttcggct cgcgcccgac gcacacatcc
      121 tgattcgtgg cgacgcaccg cttccggccg attcggcctt gcaggatggc gagcggatcc
      181 gcgtgattgg tgtcgtctcc ggaggcgcgc tcgggtgacc gcgattttgg tcctcgtacg
      241 ccacggcgag atcgtccggc ctccgtacac gtcgaacttc gaccgcgcgc ccctctcccg
      301 acgcggcgag gaccaaatcc gaaatctcgt cggcgcatgg cccggaagcc ggcctgccgc
      361 gatctttacc agcccgttgc gacgcagcat cgagagcgcg atcatcctcg cggatgcgtt
      421 tgggctctcc atttcgaagc gaccctgcct caaggaatgg tcggccgacg aatccgggat
      481 cccgcaaccg gaatacgcgg cgctggagaa gaaggcgtgg gcagaccagg actacattcc
      541 gcccagcaaa gaatcgttgt cgcaagccgc ggtccgcggc acgcgttgcc tcgaggacat
      601 cgccaagtcg agcgacgacc agaccgtggc ggtcgcaggc cacgggactc tgttctcgct
      661 ggtcaccgcg tcgctgaaag ggcaacggcc gtcggaggag tacaagaact cgatcggatt
      721 cggagcggcg gcgatcgtcg aggcgggctc cggcctgcga ctcatttccg actttcgaac
      781 gtacggctcc gtgtcggcgt gaaggaccgg accgttcaaa acccttaagt gtcgcctacc
      841 tttcatcagc acccgcatgc cctccgatga ggacgagatg ctccgggaaa tgggcctccg
      901 gagcgtcgac gacctcttcg cggacatccc cgcgggcgtg cggattccga agctggacat
      961 cccggacggc ctcccggagg accgcgtcgt cgcgcgggtg acttccatgc tcgcggcgaa
     1021 tcgcacggtc gtcgacatgc cgacgttcct cgggggaggc ctgtacgatc acttcgtccc
     1081 cgcgagcgtg cgggcgatcg tctcgcgctc cgaattctac acctcgtaca ccccatacca
     1141 acgggagatc agccagggcc tgctccaggc cttgtgggag taccagagcc tgatctgcga
     1201 gctcaccggg atggacgccg cgaacacgtc gatgtatgac ggttcgacgg cgctcggcga
     1261 agcggcccgg atggcccacc ggatctatgg cggtcggatc ttcctcatcc cgcgcgcctt
     1321 gcggcacaac cgccgggcgg tcctcgcgaa ttacgtgctc ggcaccggaa tcgaggtgcg
     1381 cgaggtggac tacgaccgcg agagtgggat gctcgatctc gcgaagttga aggcggcact
     1441 ctcacccgac gtttgcggcg tgtacgtcga gaatccgaat ttcttcggac gattcgaaga
     1501 gcaactcgag gagattcgag ccatgacgaa cggagtcctg gtcgttgggg tgaatccgat
     1561 tgcgcaagcg gtcgtccgtc ccccaggaga cttcgcagcc gacatcgtgg tcggcgaagg
     1621 tcaaccgctc ggcactcaga tgaacttcgg cggcccgctg ctcgggatct tcgcgtgtcg
     1681 acaggcccac atccggaaga tgccggggcg tgtgatcggc ttgacgcggg acgcgaaagg
     1741 gcatcgtgcc ttctgcatga cgctccagac ccgcgagcaa cacatccgcc gcgagaaggc
     1801 gatgtcgaac atctgcacga acgagtccct tctggccgtc gctgccgcgg cgtacatggc
     1861 ggtgctcggc tcgaacggcc tcc
//
LOCUS       DATLMA010000565         1311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_57021, whole genome shotgun sequence.
ACCESSION   DATLMA010000565 DATLMA010000000
VERSION     DATLMA010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57021"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..427)
                     /locus_tag="VNA10_07280"
     CDS             complement(41..427)
                     /locus_tag="VNA10_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018034339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-5A"
                     /protein_id="HVG37521.1"
                     /translation="MSWEQAEIRELKVNRYIVIDDEPCRIISIQTSKPGKHGEAKARL
                     EAVGLFDGQKRSIVHPVTHKVRVPIIDKRKAQVLSTHANVAQLMDLETYQTFELAVTE
                     EYQGKLASGQEIMYMEALGRRKLTSN"
     gene            complement(470..>1311)
                     /locus_tag="VNA10_07285"
     CDS             complement(470..>1311)
                     /locus_tag="VNA10_07285"
                     /inference="COORDINATES: protein motif:HMM:NF013922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribosomal biogenesis protein"
                     /protein_id="HVG37522.1"
                     /translation="FLKPEDFGYGRDLLHAAMVELAKRRMRKAIGPEDHLHQAVGALD
                     ELQEEENVLVERLREWYGLHFPELAPMVDTGTYIELVAMHGRREQMPIDHRESVGAEL
                     AEREEAELKSLAGLAKVVGDQRKAMEAYVERSARELAPNVSTIAGPILAARLVSLAGG
                     IEDLARAPSGTVQLLGAERALFRHLRTGSRPPKHGVLFQHPWVHGAPPWQRGAIARAF
                     AAKISLAARADAYTKRTIGPDLLTALERTIEEIHRRKADKPTRTTRDTTPRKRRDRRG
                     ARR"
BASE COUNT          192 a          423 c          418 g          278 t
ORIGIN      
        1 cgaaccgaaa tcgctcgcgc ttatttgagg acgaccccgc tcaattggac gtgagcttgc
       61 gccggccgag cgcttccatg tacatgatct cttgaccgga ggccagcttt ccctggtact
      121 cctccgtcac ggcgagctcg aacgtctggt acgtctcgag gtccatcagc tgcgcgacgt
      181 tcgcgtgggt cgacagaacc tgggccttcc gcttgtcgat gatcgggact cggaccttgt
      241 gcgtcacggg atggacgatc gagcgtttct ggccgtcgaa caggccgacc gcctcgagtc
      301 tcgccttcgc ttcgccgtgt ttcccgggct tcgacgtctg gatcgagatg atccgacacg
      361 gttcatcgtc gatgacgatg taccgattca ccttcagctc tcggatctcc gcttgctccc
      421 atgacatcgg attcgcgcag cgatatggcc ggtccctaaa aacgtttcct cagcgtcgcg
      481 ctcctcttcg gtcgcgacgt tttctcggcg tcgtgtcgcg cgtcgtccgc gtcggtttgt
      541 ccgctttgcg gcgatgaatt tcttcgatcg tgcgttcgag ggccgtcagg agatcgggcc
      601 cgatcgtgcg tttcgtgtac gcgtcggctc gggccgcgag agagatcttc gcggcgaacg
      661 cgcgcgcaat cgcgcctcgc tgccacggtg gtgcgccatg gacccatgga tgttggaaga
      721 gcaccccatg tttcggcggc cgggatccgg tccgcagatg gcgaaacaag gcgcgctccg
      781 caccgaggag ctggaccgtc ccggagggcg cccgcgcgag gtcctcgatg ccacccgcga
      841 gggagacgag ccgggccgcg aggatcggac ccgcgatggt ggagacgttc ggtgcgagtt
      901 cacgggcgga tcgctccacg tacgcttcca tcgctttccg ttgatctccg acaaccttcg
      961 cgaggccggc gagggacttc agctcggctt cctcccgctc cgcgagttcc gctccgacgc
     1021 tctcgcgatg atcgattggc atctgttctc gtcgcccgtg catcgccacg agctcgatgt
     1081 aggtcccggt atcgaccatg ggggcgagct ccgggaagtg gaggccatac cactctcgca
     1141 gccgttcgac gaggacattc tcttcttcct gcagctcgtc aagggcgccg acggcctggt
     1201 ggagatggtc ttccggtccg atcgccttgc gcatccgtcg tttcgccagc tcgaccatgg
     1261 cggcgtgcag gaggtcgcgg ccgtagccga agtcctcggg tttgaggaac g
//
LOCUS       DATLMA010000566         3066 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_841757, whole genome shotgun sequence.
ACCESSION   DATLMA010000566 DATLMA010000000
VERSION     DATLMA010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841757"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            73..1239
                     /locus_tag="VNA10_07290"
     CDS             73..1239
                     /locus_tag="VNA10_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37523.1"
                     /translation="MASDKPSPVLLDAVKAQASKLRETKNILDARQKEQDTLRAELDA
                     RSAALENQASRLKSERDEFAQERDQVIAARTSMDKDIAGMRMERDKASAEEQRVRDWA
                     RTLNEREKGVKDREEQVKRLEHDLTDHLKDSERKIQALVEREELSAQRERALADTIDR
                     LTVMERGMADRDRKLAKREEELIKLQNERLNSMEAREREMLKISEEMYARQKESAAQH
                     DSFVDLQTTLKEELYSLASEREKLAVKEKSLLEAEKFISAALEASGIEIPAETETRAP
                     PPPPAQATEMRPPRPPAAQTPPPAPPMEPLRDDIFEEEPSESKPRVSRADALERMTKA
                     LETAKRARDTGRNVSEIRKVLKQARAAFEGGDYETATRLASDILRDLESVPLPR"
     gene            complement(1205..2818)
                     /locus_tag="VNA10_07295"
     CDS             complement(1205..2818)
                     /locus_tag="VNA10_07295"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HVG37524.1"
                     /translation="MAGEVVTAYRHRNAPIGIFRWLTTTNHHEIGILYLANSFFFFLI
                     AGVLALLMRTELAYPGPTIVDANTYEQLFTMHGTTMIFLVSIPILAGFGNLMVPPLIG
                     AKDMAFPRINALSFWLIPVAGVIMWMGAANIGWTGYTPLSVYDTSSGVDMWIVGLQLL
                     GISSTAGAINFLVTILRHRAPGITFKNLSLFVWSILVTQGLVLLATPVLAGGLFILLL
                     DRHGITAFLSPAVGGDPIMWQHLFWFYSHPAVYIMILPAMGIISEVIPRMSHKPIFGY
                     KAIALSTVAIGFLSFGVWVHHMFTTGISISARLPFMVITLAIAVPSGIKIFNWIATMW
                     GGAIELKAPMLFAIGFITMFVIGGINGVFQAPIPLDYPLQDTYWVVAHLHYVLFGGTI
                     LGVFAGFYFWFPRMSRRMYSERLARWHFAFTLIGMNLVFFTMHFLGLEGMPRRVYDYP
                     PSMWTLNWLETVGAFILGIGQLIFVANVVWTFVKGPVSDPDPWGEIPGQQHEMRVPGV
                     PVYAMPILGVPNGASREGTTEAVGPTRGP"
BASE COUNT          667 a          937 c         1015 g          447 t
ORIGIN      
        1 tcccgcggac gacgacttat atagcgtcgg atgcaccagt tcgttttgcc tggaaacagg
       61 cggtgaccga acatggccag tgacaagccc tcccccgtcc tcctcgatgc ggtgaaggct
      121 caggcctcga agctgaggga aacgaagaac atcttggatg cccgccagaa ggagcaggac
      181 acgctccgtg cggagctcga cgcccggagc gcggcgcttg agaatcaagc ctcccgcctc
      241 aagtccgagc gggacgagtt cgcgcaggag agggaccagg tcatcgcggc ccgcacgtcg
      301 atggacaagg acatcgcggg catgcggatg gaacgggaca aggcctccgc cgaggagcag
      361 cgcgtccgag actgggcccg cacgctgaac gagcgggaga agggagtcaa ggaccgcgag
      421 gagcaggtga agcgcctgga gcatgacctc acggaccacc tgaaagactc ggaacggaag
      481 atccaggccc tcgtcgaacg cgaggaattg tccgcgcagc gcgagcgcgc cctcgccgac
      541 acgatcgatc ggctcacggt gatggagcgc gggatggcgg accgcgaccg caagctggca
      601 aagcgcgaag aggaactgat caagctccag aacgagcggc tcaactccat ggaagcgcgc
      661 gagcgggaga tgctcaagat cagcgaggag atgtacgccc gccagaagga atccgccgcg
      721 caacacgact ccttcgtcga cttgcagacc acgctcaaag aggaactgta cagcctcgcc
      781 tcggaacgcg agaaactcgc ggtgaaggag aagagcctcc tcgaggcgga gaagttcatc
      841 agcgcggcac tcgaggcgag cggcatcgag atcccggccg aaacggagac gagagccccg
      901 cctccgcccc cggcccaggc cacggaaatg cgacctcccc ggccgcccgc cgctcagact
      961 ccgcccccgg cccctccgat ggagccgctg cgggacgaca tcttcgagga ggaaccgagc
     1021 gagtcgaagc cccgggtctc tcgggccgac gccctcgagc ggatgacgaa agccctcgag
     1081 accgcaaagc gagcccgcga caccggccgc aacgtgagcg agatccggaa ggtgttgaag
     1141 caagcccgcg ccgcgttcga aggcggcgac tatgagacgg ccacgcgcct cgcgagcgac
     1201 atcctcaggg acctcgagtc ggtcccactg cctcggtagt cccttcgcga cttgcgccgt
     1261 tcggcacacc gaggatcggc atggcgtaca ccggcacgcc gggcacgcgc atctcgtgct
     1321 gctgtcccgg gatctctccc cagggatccg gatccgagac cgggcctttg acgaaggtcc
     1381 aaacgacatt ggcgacgaag atcagctggc cgatccctag gatgaacgcc ccgaccgtct
     1441 cgagccagtt caaggtccac atggatggcg gatagtcgta cacgcggcgg ggcatgccct
     1501 cgagcccgag gaagtgcatc gtgaagaaga cgaggttcat gccgatcagc gtgaaggcga
     1561 agtgccaccg cgcaagccgc tcggagtaca tccgacgaga cattcgcggg aaccagaagt
     1621 agaagcccgc gaagaccccg aggatcgtgc cgccaaacag gacgtaatgg aggtgggcga
     1681 cgacccagta cgtgtcctgg agcggatagt cgagcgggat cggcgcctgg aagacgccgt
     1741 tgattccgcc gatcacgaac attgtgatga agccgatcgc gaagagcatc ggcgccttga
     1801 gctcgattgc tccgccccac atcgtcgcga tccaattgaa gatcttgatg ccgctcggca
     1861 ccgcgatggc cagggtgatc accatgaacg ggaggcgggc ggagatcgag atgcccgttg
     1921 tgaacatgtg gtggacccag acgccgaacg agaggaaccc gatcgcgacg gtcgataggg
     1981 cgatcgcctt gtacccgaag atgggcttgt ggctcatccg cgggatgacc tcggagatga
     2041 tccccatcgc ggggaggatc atgatgtaca ccgcgggatg ggagtagaac cagaacaggt
     2101 gttgccacat gatcggatcg ccgccgacgg cgggcgaaag gaacgccgtg atgccgtggc
     2161 ggtccaggag cagtatgaac aatccgcccg cgaggaccgg cgtcgccagc aggacgagtc
     2221 cttgcgtgac gaggatcgac cagacgaaca gggagagatt cttgaacgtg atgccggggg
     2281 cccgatggcg caggatcgtc acgagaaagt tgatcgcacc ggcggtcgag gaaatcccga
     2341 gcagctgcaa cccgacgatc cacatgtcga cgccggagct ggtgtcgtac acgctgagcg
     2401 gcgtgtagcc ggtccatccg atgttcgcgg cccccatcca catgatcacg ccggcgaccg
     2461 ggatcagcca gaagctcagt gcgttaatcc tcgggaaggc catgtccttc gccccgatga
     2521 gcgggggcac catgaggttc ccgaaacccg cgaggatcgg aatcgagacg aggaagatca
     2581 tcgtggtgcc gtgcatcgtg aacagttgtt cgtacgtgtt cgcgtccacg atcgtcggtc
     2641 ccgggtacgc gagctcggtg cgcatcagga gtgcgaggac ccccgcgatg aggaagaaga
     2701 agaacgagtt cgcgagatac aggatcccga tttcatggtg gttggtcgtc gtcaaccagc
     2761 ggaatatccc gattggggcg ttccgatgac gatacgcggt gacgacttcg cccgccatcg
     2821 atgagactcc gaagcggacg tccggtgcgc gcggccgccg ccggaatccc gtacttcaga
     2881 atcccgcata aggctttcca ccggagcctt cgcatgttgt tggaggagac acacacatcg
     2941 tcagaccaca aatgctttag aggtaatccg atttcggcag tcgatgtcgg gcctccggag
     3001 gatgggcctc gtggggctgt ccgccctctt ggtcacattt ctcggaggaa cggtacgcgc
     3061 cgatcc
//
LOCUS       DATLMA010000567         2333 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_356701, whole genome shotgun sequence.
ACCESSION   DATLMA010000567 DATLMA010000000
VERSION     DATLMA010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356701"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1030
                     /locus_tag="VNA10_07300"
     CDS             <1..1030
                     /locus_tag="VNA10_07300"
                     /inference="COORDINATES: protein motif:HMM:NF013959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FG-GAP repeat protein"
                     /protein_id="HVG37525.1"
                     /translation="LKISMHSTYGGSGSATTGGFDNVALTWTSTPGTTSGMQQYWRLN
                     ILPNRPGTAFTFSLTGHVTASTDGDVVQLYYSTNVAGGDPATGTYTLLTTISATSDTT
                     VSVPLTPASNFAGATVWIQAVDTNRVVGNQSLDSFFADQMYVNANTPTGTTGITLANP
                     NGDTSDINSISAGDQDADGFADLAVVTAHGHVFKYMGSISGLQTPSGCYYSNAAGGSC
                     TTSGTSIVRVKWGNMTTASAGLEIVIAFSTTVRVITGYGSTGSVITLSLPSYSPSSAI
                     TALAVGDVNGDGTDDVVIGTSGGGIFMFANLGGAVTWSNVVTVYNVGAPVYTLVIGDG
                     SNSLYMGR"
     gene            complement(1027..1641)
                     /locus_tag="VNA10_07305"
     CDS             complement(1027..1641)
                     /locus_tag="VNA10_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37526.1"
                     /translation="MMDEVRLGLASVTILPVVRGLPSETSTVADAIRTTNPKVVALSI
                     GPEELQTLRVYDGGPLEPENFEEEIYVAGLSAWEPPLKPPPCFTEAIRIAENRGTPLE
                     AIDMDEVTYTENYVDCVSGLEVVFQGRLERRLRKRQFHATTPRDFVIEWDAEVNGPPG
                     FAQLQARREAHMAARLREIAVSGGSVLAVIEVERVKGVLAGLRG"
     gene            complement(1638..>2333)
                     /locus_tag="VNA10_07310"
     CDS             complement(1638..>2333)
                     /locus_tag="VNA10_07310"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HVG37527.1"
                     /translation="GSLEDGVIYTRFGVSILSRRTLGEFLEEGVPPFLYSAPGGLYVR
                     LDADALRRLREERQVSLGTLADIAGVTRRTIQMYLEGMSATMEVAMRLEEFLNESLVV
                     PVDPFALLADPARPDERPPQLEGFEREMFERLERLGYRVLRTVRSPFDALSKHDETTF
                     LTGVGEADRALERKAEVVANLSRVVEKDSVMFVERARVRMSIRGVPVIAREELRRAKD
                     RDDVEEMISERKG"
BASE COUNT          409 a          794 c          720 g          410 t
ORIGIN      
        1 tctcaagatt tcgatgcact ccacctacgg gggttccggc tcggcgacga cgggcggctt
       61 cgacaacgtc gcgctgacgt ggacgtccac ccccggaacg acgagcggca tgcagcagta
      121 ctggaggctc aacatcctcc ccaaccggcc gggaaccgcg ttcacgttct ctctcaccgg
      181 gcatgtgacc gcgagcacgg acggcgacgt cgtccagctg tactactcca cgaacgtcgc
      241 gggcggtgac cccgcgacgg ggacgtacac cttgctaacg acgatcagcg cgacctccga
      301 cacgacggtt tcggtcccgt tgacccccgc atcgaacttc gcgggcgcga cggtgtggat
      361 tcaagcggtc gataccaacc gcgtcgtggg aaaccaaagt ctcgacagct tcttcgcaga
      421 ccagatgtac gtcaacgcga acacgccgac cgggacgaca ggcatcaccc tggcgaaccc
      481 gaacggcgac acctctgaca tcaactcgat tagcgccggg gaccaagacg cagacggatt
      541 cgccgatctc gcggtcgtca cggcgcacgg tcacgtgttc aagtatatgg gatccatctc
      601 cggactgcag acgccgtccg gatgttacta ctccaatgcg gccggcgggt cttgcacgac
      661 ctccgggacc tcgattgttc gggtgaagtg gggcaacatg acgaccgcct ccgccggtct
      721 ggagattgtg attgccttca gcacgacggt tcgcgtgatc acgggctacg gctcgacggg
      781 ttccgtaatt acgctaagtc tgccgagcta cagcccttcg agcgccatca ccgctctcgc
      841 cgtcggcgat gtgaacggag atgggaccga tgatgtcgtg atcggtacgt ccggtggcgg
      901 aatcttcatg ttcgcgaacc ttggcggcgc cgtcacctgg tccaacgtgg tcacggtgta
      961 caacgtcggt gctccggttt acacgctcgt gattggggac gggagcaact cgctgtacat
     1021 gggccgttag ccgcgcaggc cggcaagcac ccctttcact cgctctacct cgataaccgc
     1081 gaggaccgac cctcccgaga cggcgatttc tcgaaggcgc gcagccatat gcgcctcgcg
     1141 cctcgcctgc agctgggcga agccgggcgg accgttgacc tccgcgtccc actcaatcac
     1201 aaagtcccgc ggggtcgtcg cgtggaactg cctcttcctc aatctgcgct cgagtcgtcc
     1261 ttggaagacg acctcaagcc cggacacgca atccacgtag ttctccgtgt acgtgacctc
     1321 gtccatgtca atcgcctcga ggggggttcc tcggttctcg gcgattcgga tcgcctccgt
     1381 gaagcacggc ggcggtttca acggcggttc ccaggccgag agcccggcga cgtagatctc
     1441 ctcctcgaag ttctccggct ccaacgggcc gccatcgtag acgcgcaacg tctggagctc
     1501 ctccgggccg atgctcagcg cgacgacctt cgggttcgtg gtccggatgg cgtctgcgac
     1561 ggtcgacgtc tccgaaggga gaccgcggac gaccgggagg atcgtgacgg acgcgaggcc
     1621 gaggcggacc tcgtccatca acccttcctc tcggagatca tctcctcgac atcgtcgcga
     1681 tctttcgcgc ggcgcagttc ttcgcgcgcg atgacgggga cgccacggat gctcatccga
     1741 acccgggccc gctcgacgaa catgaccgag tctttctcga ccacacggct caggttcgcc
     1801 acgacctccg ccttccgctc gagcgctcgg tccgcttctc cgacgccggt gaggaacgtc
     1861 gtctcgtcgt gtttcgacag cgcgtcgaag gggctccgca ccgtccggag gacccgatag
     1921 cccagccgtt cgaggcgctc gaacatctcc cgctcgaagc cctcgagctg cggcggtcgc
     1981 tcgtctggac gtgccggatc cgccaggagg gcgaacggat ccacggggac cacgagcgac
     2041 tcgttcagga attcctcaag gcgcatcgcg acttccatcg tcgcggacat tccctcgagg
     2101 tacatctgga tcgtgcgacg cgtgacgcct gcgatgtccg cgagggtgcc gagcgacacc
     2161 tgtcgctctt cgcgcagccg gcgaagggcg tccgcgtcga gccgcacgta cagccctccg
     2221 ggcgcggagt acaggaaggg agggacgccc tcctccagga attcgccgag cgtccgccgg
     2281 gagaggatcg acacgccgaa ccgcgtgtag atcacgccgt cctccaggga tcc
//
LOCUS       DATLMA010000568         1551 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_420654, whole genome shotgun sequence.
ACCESSION   DATLMA010000568 DATLMA010000000
VERSION     DATLMA010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420654"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..1238
                     /locus_tag="VNA10_07315"
     CDS             213..1238
                     /locus_tag="VNA10_07315"
                     /inference="COORDINATES: protein motif:HMM:NF016842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0030674 - protein-macromolecule adaptor
                     activity [Evidence IEA];
                     GO_function: GO:0043023 - ribosomal large subunit binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="60S ribosomal export protein NMD3"
                     /protein_id="HVG37528.1"
                     /translation="MFCVECGAEGPTYQGLCARDFLKKHPVVAPADVLDIDRCTSCGS
                     FRLASGWSKIDRELALTGLLRESIRKLPPWERVTFTHVAREEDANNLSLTVKALGRFE
                     ALQSVQDFRVRVRIKPTLCDSCQKQRSRYFEGVLQVRGDGRELTPQEVRGVRTFVLAR
                     VDRSGDAGAFVSRIEDVHGGLDFYLSTNALGKTLAREVSESFGGSVSSSPKLFGQKEG
                     REVYRVTSLVRLGAFHVGDVVRHKGALAEVTSVRPFVVLRDLTTGEARRFKPKDVRTA
                     RRVEAERFEAKIERLEGGQVIAIHPESEEARPVRPRPEDRTARAVVVWTPDGAYLSKL
                     PPGPSKA"
     gene            1265..>1551
                     /locus_tag="VNA10_07320"
     CDS             1265..>1551
                     /locus_tag="VNA10_07320"
                     /inference="COORDINATES: protein motif:HMM:NF020014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37529.1"
                     /translation="MKVALGCRALDDLLGGGVEEGCITLLHGEAGSGKTNFCLQLARN
                     VVRAGHKVIYIDTEGVSLDRLQQICGDDFDVVAKNILFSEPYSFEEQEKLI"
BASE COUNT          266 a          488 c          542 g          255 t
ORIGIN      
        1 ctccggcgag aaggagcgag gccgagagga cggcgagtgc gacggcatcg cgatggcgaa
       61 tctggcgcat gcgccaccac gaacgaggct tcgccttcgc catcgaccaa agcgacgcgc
      121 cgacggatac ttatggcctt cccctccggt atcgggcccg atgcggctac gccagttctt
      181 aagtagcgcc gcgccgttcg aaaccggcgg agatgttttg cgtcgagtgc ggcgcggaag
      241 ggcccacgta ccaaggcctg tgcgcccggg atttcctgaa gaaacatccg gtcgtggcgc
      301 ccgcggacgt cctcgacatc gatcgatgca cctcctgcgg ctcgttccgc ctggcgtcgg
      361 gctggtccaa gatcgaccgc gagctggcgc tcacggggct ccttcgtgag agcatccgga
      421 aactcccgcc gtgggagcgc gtgaccttca cccacgtcgc ccgcgaagag gacgcgaaca
      481 acctctcgct gaccgtcaag gcgctcgggc gattcgaggc cctccagtcg gtccaggact
      541 tccgggtgcg cgtgcggatc aaaccgaccc tctgcgattc gtgccagaag cagcggagcc
      601 ggtactttga aggggttctc caggtccgcg gggatggtcg cgaactcacg ccgcaggagg
      661 tccgcggagt gcggaccttt gtcctcgcgc gcgtggaccg ctccggagat gcgggggcct
      721 tcgtctcgcg catcgaggac gtccatggcg gcctcgactt ctatctgagc acgaacgccc
      781 tcggcaagac gctcgcccgc gaggtctcgg agtcgttcgg cgggagtgtg tcctcgtccc
      841 cgaagctgtt cggccagaaa gagggccgcg aggtgtaccg ggtgacgtcc ctcgtccgcc
      901 tcggtgcatt ccacgtcggg gacgtcgtgc gacacaaggg cgccctcgcc gaggtgacgt
      961 cggtccgacc gttcgtggtc cttcgcgacc tgacgaccgg cgaagcgcgg cgcttcaagc
     1021 cgaaagacgt tcggacggca cgacgcgtcg aggcggagcg gtttgaggcg aagatcgaac
     1081 gcctggaggg cggccaggtc atcgccatcc atccggagtc cgaggaagcg aggccggtgc
     1141 gtccgcgccc cgaggatcgg acagcgcggg cggtcgtcgt ctggaccccg gacggggcgt
     1201 atctgtccaa gctgccgccg gggccttcga aggcttaaag ggcgccggga ctttgtcgat
     1261 gcaaatgaag gtggccctgg gctgtcgggc cctggacgac ctcctgggcg ggggagtcga
     1321 ggaaggctgc atcacgctcc tgcacgggga ggcggggagc ggcaagacga atttctgctt
     1381 gcagctcgca cgaaacgtcg tgcgggcggg acacaaggtg atctacatcg acacggaggg
     1441 cgtgtcgctc gatcgcctcc agcagatttg cggtgacgat ttcgatgtcg tcgcgaagaa
     1501 catcctcttc tcagaaccgt acagcttcga ggaacaggag aagctgatcg a
//
LOCUS       DATLMA010000569         2801 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_180132, whole genome shotgun sequence.
ACCESSION   DATLMA010000569 DATLMA010000000
VERSION     DATLMA010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180132"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VNA10_07325"
     CDS             <1..546
                     /locus_tag="VNA10_07325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37530.1"
                     /translation="DFSLTLYYSSLVYMGGNVTPVPIGTILPPQPVYYPETLCGTTSA
                     YRAADFDPTVELVRYTGRFQELTPDRNGDGTFDALVIRAEVEVFATASFDLSGLLAAA
                     SGSPEIAKSFSQVCLQEGTQWAEFSFAGPNIRAAGIDGPYQATLSITPTARGIDPTTT
                     YTTMAYHATDFDVNSSGPAQP"
     gene            573..1382
                     /gene="rsmA"
                     /locus_tag="VNA10_07330"
     CDS             573..1382
                     /gene="rsmA"
                     /locus_tag="VNA10_07330"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013904865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HVG37531.1"
                     /translation="MDEAPRRVLDRLGIRPRKRLGQHFLVDSRVALRHVDHAKIGPTD
                     TVLEIGPGLGVLTRLLAERARHVVAIEADRRFAAYLRESLPRVEVIEGDALTIEWPHF
                     DVMASNLPYQISSPLTFRLLNEPFRRAVLMYQWEFARRMTAKPATADYSRLSVGVYRR
                     SACEILERVPRNAFYPQPRVDSALVRLEPRPPPFPIADPDRYDAVVDALFAHRRKTVE
                     NGLRLGWKGVATSREALETVLPAVPFRTRRVEELSPEEIGRVADAVRMAKG"
     gene            1430..2302
                     /locus_tag="VNA10_07335"
     CDS             1430..2302
                     /locus_tag="VNA10_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37532.1"
                     /translation="MVRKKTLSELDQAEIKLQSLFEKRDALNQEAQLLRQERDLVHET
                     KREIGAKLRGLKDRRASFAGEARKHREKRDELQAKAKALIEMKQKLRSSGHADVGAEL
                     RALKRRVTSMEMRQQTASLTLSAENELLGELKDSMKRLKQLEVLKGDQDKIAKEIKDI
                     DSGITEFFEAAEKEHEAAVGLSEKARAVHEETLGIVHQIAALVHDGNEKHEAYLAARE
                     KADEVHAKVVEMREKVLSIRGAKRSEARESRTLLRQQNRSVRDALLDEKKLEASADAA
                     LKALFEKGKVEIGR"
     gene            2299..>2801
                     /locus_tag="VNA10_07340"
     CDS             2299..>2801
                     /locus_tag="VNA10_07340"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HVG37533.1"
                     /translation="MKAVVLAGGEGTRLKPLTYKRPKPLIPIAGRPCIDYVLRSLAAS
                     GFHEIIVTTAYLSDTLIKSIGDGLDYNASIVYSFEENPAGTAGAVRRVGMFIDDTFLV
                     AMGDILCDVDFKALYDFHKRKGGVVTIALTDVEDPTQFGIVGLDSKGRIQKFKEKPRK
                     EEAFSNLA"
BASE COUNT          528 a          924 c          926 g          423 t
ORIGIN      
        1 gatttcagtc tcacgttgta ctacagctcg ctcgtctaca tgggcggcaa cgtgacgccg
       61 gtcccgatcg gcacgatcct gcctcctcag cccgtatact atccggagac gctatgcggc
      121 acgacgtcgg cgtatcgagc cgcggacttc gacccgacgg tggaactcgt ccggtacacc
      181 ggccggttcc aggagctcac tcccgatcgg aacggggacg gcaccttcga cgccctcgtc
      241 attcgggcgg aggtcgaggt gttcgcgacc gcgagcttcg atttgtccgg attgctcgcg
      301 gcggcatccg ggtctccgga gatcgcgaag tccttcagcc aggtatgctt gcaagaagga
      361 acgcagtggg cggagttctc gttcgccggc ccgaacatcc gggcggcggg gattgacggc
      421 ccgtaccagg ccacgctgtc gatcaccccg acggcgcgcg gcatcgaccc cacgacgacg
      481 tacacgacga tggcgtacca cgcgaccgac ttcgacgtga actcgagcgg ccccgcgcaa
      541 ccctaaagcg cccggagtcc gtcccgccgg gggtggacga ggcccctcgc cgcgtactcg
      601 accggttggg aatccgcccg aggaagcgcc tcggtcagca tttcctggtc gactcccgtg
      661 tggcgttgcg gcacgtcgac cacgcgaaga tcggtccgac ggataccgtc ctggaaatcg
      721 gcccggggct cggcgtcctc acgcgcctgc tggccgagcg ggcgcgacac gtcgtggcca
      781 tcgaggccga ccgccggttc gcagcatacc tgcgcgagag cctcccccgc gtcgaggtga
      841 tcgagggcga tgcgctgacc atcgaatggc ctcacttcga cgtcatggcc tcgaacctgc
      901 cgtaccagat ctcgtccccg ctcaccttcc gattgctcaa cgagccgttc aggcgcgccg
      961 tcttgatgta tcaatgggag ttcgcgcggc gaatgaccgc gaagcccgcg accgcggatt
     1021 actcgcggct gtccgtcggc gtctaccggc ggtccgcgtg cgagatcctg gagcgggtgc
     1081 cacgcaacgc gttctacccc cagccccgcg tggactcggc gctcgtccgg ctcgaacccc
     1141 gtcccccccc gtttccgatc gcggatccgg accgatacga tgcggtcgtg gacgccctct
     1201 tcgcgcaccg gcggaagacg gtcgagaacg gcctgcgcct cggctggaag ggcgtggcga
     1261 cctcacggga ggcgcttgag accgtcctgc cggccgtgcc gttccgcacg cggcgcgtcg
     1321 aggagttgtc tcccgaggag attggtcgcg tcgccgacgc cgtccgcatg gcgaaaggtt
     1381 aatgtcacat ccgccaatcg ctgcattcca tcctgccgcg ggggacccga tggtccggaa
     1441 aaagaccctt tctgaactcg atcaggcgga gatcaagctc caaagtctct tcgagaaacg
     1501 agacgccctg aaccaggagg cgcagctcct gcgtcaggag cgagatctcg tccatgaaac
     1561 gaaacgggag atcggcgcga agctccgggg actcaaggac cgccgggcct cgttcgccgg
     1621 ggaggcccgg aagcaccgcg agaaacggga cgagctccag gcgaaggcga aagccctgat
     1681 cgagatgaaa cagaagctcc gcagctccgg ccacgccgac gtcggcgcgg agctgcgcgc
     1741 cttgaaacgg cgcgtcacct cgatggagat gcggcagcag accgcatccc tgacgctgag
     1801 tgcagagaac gagctgctcg gcgaactcaa agactcgatg aaacgcctca agcaactcga
     1861 ggtgctcaag ggggatcaag acaagatcgc gaaggagatc aaggacatcg actcgggcat
     1921 caccgagttc ttcgaggccg cggagaagga gcatgaggcc gccgtcgggc tcagcgagaa
     1981 ggcccgggcc gtgcacgaag agaccctcgg gatcgtccac cagatcgcgg cgctcgtcca
     2041 cgacgggaac gagaagcacg aggcgtacct cgccgcgcgc gagaaagccg acgaagtcca
     2101 cgcaaaggtc gtcgagatgc gcgaaaaggt cctgtcgatc aggggcgcga agcggtcgga
     2161 ggcgcgggaa tcccggaccc tgttgcgcca gcagaaccgc tcggtccggg acgcgctcct
     2221 ggacgagaag aagctcgaag cctccgcgga cgcggccctg aaggcgctct tcgagaaagg
     2281 gaaagtggag atcggccgat gaaggcggtc gtcctggcgg gcggcgaagg gactcgcctg
     2341 aaaccgctga cgtacaagcg accgaagccg ctcatcccga tcgcgggacg gccgtgcatc
     2401 gactacgtgc tgcgctccct cgcggcgtcc gggttccacg agatcatcgt gacgaccgcg
     2461 tacctgtcgg acaccctgat caagtcgatc ggcgacggcc tcgactacaa cgcgtccatc
     2521 gtgtacagtt tcgaggagaa cccggcaggc accgcgggcg ccgtgcgccg ggtcggcatg
     2581 ttcatcgacg acacgttcct cgtcgcgatg ggcgacatcc tgtgtgacgt cgacttcaag
     2641 gcgctgtacg attttcacaa gcggaagggc ggcgtcgtga cgatcgccct gaccgacgtc
     2701 gaggacccga cgcagttcgg gatcgtcggc ctcgactcga agggccgcat ccagaagttc
     2761 aaggagaagc cgcggaagga ggaggccttc tcgaacctcg c
//
LOCUS       DATLMA010000570         1330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_896772, whole genome shotgun sequence.
ACCESSION   DATLMA010000570 DATLMA010000000
VERSION     DATLMA010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_896772"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..166)
                     /locus_tag="VNA10_07345"
     tRNA            complement(82..166)
                     /locus_tag="VNA10_07345"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(128..130),aa:Leu,seq:gag)
     gene            300..>1330
                     /locus_tag="VNA10_07350"
     CDS             300..>1330
                     /locus_tag="VNA10_07350"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HVG37534.1"
                     /translation="MPSRRKSRAAKRRTFDVINPATEKALASYPILTAPQVRAKVEAA
                     REAFRSWSKLDPKERAAYLLRFAEVLRKHKAAYAETMTLEMGKVIREAIAEVEKCAWA
                     AEYFAENGPGFLQPEIVTTDAMRSYVAFHPRGVLGSIMPWNFPMWQIVRFAVPALIAG
                     NTVVVKPASASPQSGLNLETAFREAGLPDGVFQIVVGDRTTATALIRSPVSVVSLTGS
                     VRTGVYVAREASKDLKKVVLELGGSDPFIVAGDADLDAASKGAVAGRFVNGGQSCIAA
                     KRFFVVDSVADEFVAKFAEQMRRLRVGDPLDPTTDVGPLVNKAQRDEIEGQVKDAVAK
                     GARVEVGGKR"
BASE COUNT          244 a          419 c          444 g          223 t
ORIGIN      
        1 tcaccctcgc gatcctcatg gccgacgcgc ggggctggct catcggataa gctacaccgc
       61 ggacacggtg gccggagaag atgcgtgggg caggatttga acctgcgaac ccctgcggga
      121 cagcgacctc aacgctgcgc ctttgaccaa gctgggccac ccacgcacgg ggcgctttca
      181 tcgcgggcct cgatattaat cttccttcag cgattcgtcg cactccatcg agcgccctcc
      241 gaagcgagac ccgcaaagga ttatttggcg cggagcccgt aggcgagaag gagatccgca
      301 tgccgtctcg acggaagtcc cgggccgcga agcgccgcac gttcgacgtc atcaacccgg
      361 cgacggagaa agctctggcg tcatatccga tcctgacggc gccgcaggtc cgagcgaaag
      421 tcgaagcggc ccgcgaggcc ttccgatctt ggtcgaagct cgacccgaag gagcgcgcgg
      481 cctacctgct gcgattcgcg gaagtcttgc ggaagcacaa ggccgcctac gccgagacga
      541 tgaccctcga gatgggcaag gtgatccgcg aggcgatcgc cgaagtcgag aagtgcgctt
      601 gggccgcgga gtattttgcg gaaaacggac cggggttctt gcaaccggag atcgtcacga
      661 cggatgcgat gcgatcctac gtcgcgttcc atcctcgcgg ggtcctcggc tcgatcatgc
      721 cgtggaactt cccgatgtgg caaatcgtcc gcttcgcggt gcccgccctg atcgctggca
      781 acacggtcgt cgtgaagccc gcgagcgcgt cgccccaatc cgggctgaac ctcgagacgg
      841 cgtttcgaga ggccggtctt ccggacggcg tgttccagat tgtcgtcggc gatcggacga
      901 ccgcgaccgc cttgattcgc tcgcccgtct ccgtcgtgag cttgacggga tccgtgcgca
      961 ccggcgtgta cgtcgcccga gaggcctcga aggatctcaa gaaagtcgtg ctcgagctcg
     1021 gcggatcgga tccgttcatc gtcgcgggcg atgcggacct ggacgcggcg tcgaagggcg
     1081 ccgtcgccgg acgattcgta aatggcggac aatcgtgcat cgccgcgaaa cgcttcttcg
     1141 tcgtggactc cgtggccgac gagttcgtcg ccaagtttgc ggaacagatg cgacgactgc
     1201 gagttggcga ccccctcgat ccgacgacgg acgtcggccc gctcgtcaac aaggctcaac
     1261 gggatgagat cgagggccag gtcaaggatg ccgtcgcgaa aggcgcgagg gtcgaagtcg
     1321 gcgggaagcg
//
LOCUS       DATLMA010000571         1209 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_298767, whole genome shotgun sequence.
ACCESSION   DATLMA010000571 DATLMA010000000
VERSION     DATLMA010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298767"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VNA10_07355"
     CDS             <1..724
                     /locus_tag="VNA10_07355"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HVG37535.1"
                     /translation="GFVPGRPYIVSGPPGAGKTILAMQFLREGLEGGERCLFVALEEP
                     PNELKINMRAFRWNLDDLEVLDANSDIRRFEPTPILEISTEEEPAKMRSIGERIRKTP
                     DFESKEVTVHSLQQLLKNLFLKRNYERVVVDSMTALRYFCMREFEETVTTQSFMRYLA
                     ESKVTSLLTLELPEEGEVPPEAFLARGEIRLHKLRDETGIKRFLSVEKYKGSSHDETV
                     YSFDITNAGIVINMAPMQAVAR"
     gene            855..>1209
                     /locus_tag="VNA10_07360"
     CDS             855..>1209
                     /locus_tag="VNA10_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HVG37536.1"
                     /translation="MKSLLNEARARHQEAEAKEERESEKAKVVEKKKNGDDEEIAKIV
                     ESINVSIKIVGCGGGGSNTINRCSEAGITGAQLAAVNTDAKHLLAVHAPKKILIGKRL
                     TKGLGAGALPEVGEQA"
BASE COUNT          264 a          356 c          390 g          199 t
ORIGIN      
        1 cggcttcgtc cccggacggc cgtatatcgt ctcgggtccg ccgggcgcgg gcaagacaat
       61 cctcgcgatg cagttcctgc gggaaggcct ggagggcggc gagcgatgcc tgttcgtcgc
      121 cttggaggag cctccgaacg aactgaagat caacatgcgc gcgttccggt ggaacctgga
      181 tgacctcgag gtcctagacg cgaactcgga catccgccgt ttcgagccca caccgatcct
      241 cgagatttcg acggaggaag agcccgcgaa gatgcgatcg atcggcgagc gcatccgcaa
      301 gaccccggac ttcgagagca aggaagtcac cgtccactcg ctccagcaac tcctgaagaa
      361 cctgttcctg aagcggaact acgagcgcgt cgtggtcgac tcgatgacgg cccttcggta
      421 tttctgcatg cgcgagttcg aggagactgt gacgacccaa tcgttcatgc gttacctggc
      481 ggaatcgaag gtgacctcgc tcttgaccct cgaattgccg gaagagggcg aagtcccgcc
      541 ggaagcgttc ctcgcgcgcg gggagatccg tctgcacaag ctccgggatg agacggggat
      601 caagcgattc ctctccgtcg agaagtacaa aggttcgtcc cacgacgaga ccgtgtattc
      661 gttcgacatc acgaacgccg ggatcgtcat caacatggcc ccgatgcagg cggtcgcccg
      721 ctgaggcccg gtttccgcgg cagccccgcg gcggatgtca acgcgggggt ttgtctgaca
      781 gatgtatgac tacttttaaa tagggtaaga tggattcgtc cggccgtcag tctccatcgg
      841 gatgggatgg cacaatgaaa tcacttctca acgaagcccg ggctcgacac caggaagccg
      901 aggcgaagga agaacgcgag tccgagaagg ccaaggtcgt cgaaaagaaa aagaacggcg
      961 acgacgagga gatcgcaaag atcgtcgagt cgatcaacgt ctcgatcaag atcgtcggct
     1021 gcggcggcgg tgggtcgaac acgatcaacc gttgcagcga ggccggcatc acgggcgccc
     1081 aactggccgc ggtgaacacg gacgcgaaac acctgctggc cgtccatgcg ccgaagaaga
     1141 tcctaatcgg gaagcggctc acgaaaggcc tcggggccgg tgcccttccg gaggtcgggg
     1201 agcaggccg
//
LOCUS       DATLMA010000572         1275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_357181, whole genome shotgun sequence.
ACCESSION   DATLMA010000572 DATLMA010000000
VERSION     DATLMA010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357181"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VNA10_07365"
     CDS             complement(<1..313)
                     /locus_tag="VNA10_07365"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HVG37537.1"
                     /translation="MLLVKLGGSVLTDKTRLRTARRATIRRLASELASVRQSLLVVHG
                     AGSYGHILARRHKLNQGGVSHSKRIAASRVQRDVKELDGIVVNALLRAGIAAIPIAPS
                     TV"
     gene            416..925
                     /locus_tag="VNA10_07370"
     CDS             416..925
                     /locus_tag="VNA10_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013899097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HVG37538.1"
                     /translation="MTRKPGSMYREIRGQAYARKECMGGVPQIRISQFDIGDPRTKFP
                     VKIHLVAAEACQIRHIALEAARISANRYIAKKAGNAYHLKLRLYPHNVLRENKIATGA
                     GADRISEGMRAAFGAPVGTAARVKPGTKVFTISTTEDHVDDAKEALRKGGVKLPTPWR
                     LEIEREKER"
     gene            975..>1275
                     /locus_tag="VNA10_07375"
     CDS             975..>1275
                     /locus_tag="VNA10_07375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0090560 -
                     2-(3-amino-3-carboxypropyl)histidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthamide synthesis protein"
                     /protein_id="HVG37539.1"
                     /translation="MGETDRLLDVIRGRNAKTVGLQFPVGLRTKAVELAQELEAKAGV
                     TCLVSADPSFGACDVADMPVDLIVHLGHAPMPHLRYNRVFFFDLPGPSLGSMAFID"
BASE COUNT          242 a          413 c          421 g          199 t
ORIGIN      
        1 ggacagtcga aggcgcgatg gggatcgccg cgatccctgc gcggaggaga gcgttcacca
       61 cgatgccatc aagctccttc acatctcgct gaacgcgcga cgccgcgatc cgcttggagt
      121 gtgacacgcc tccttggttc aacttgtgtc ggcgggcgag gatgtgaccg taggaaccgg
      181 ctccatggac gacgaggaga gattgccgga cggacgccag ctccgacgcg aggcgccgga
      241 tcgtcgcccg gcgcgcggtc cgaaggcgcg tcttgtccgt caacacactg ccaccgagtt
      301 tcacgaggag catcgcaacg cgggcgacgc gccgcgccgc acttaacgtt ttgccgcgga
      361 ccacgttcat cggggaaggg ttaaatatcg ctcgccactt cgagcggctc ccaagatgac
      421 gcgaaagccc ggaagtatgt atcgcgagat tcgcggccag gcgtacgccc gcaaggagtg
      481 catgggcggc gtcccgcaga tccgaatcag tcagttcgac atcggcgacc cgcggacgaa
      541 gttcccggtg aagatccatc tcgttgccgc ggaggcgtgc cagatccggc acatcgccct
      601 cgaggccgcg cggatctcgg cgaaccggta catcgcgaag aaagccggga acgcgtatca
      661 cctgaagctc cgcctgtatc cgcacaacgt gctgcgcgag aacaagatcg cgaccggggc
      721 cggggcggac cgcatctcgg aaggcatgcg cgccgcgttc ggagcgcccg tcggcacggc
      781 cgcgcgggtg aagccgggca caaaggtctt cacgatctcg acgaccgagg accacgtgga
      841 cgacgcgaaa gaggccctcc ggaagggcgg cgtgaaactc ccgacaccat ggcggctcga
      901 gatcgaacgc gaaaaagaac gctaggacgc caagggacat ctttttccgc gcgtccgcgt
      961 gtctgttccg aatcatgggc gaaacggacc ggctgctcga cgtgatccga ggacggaacg
     1021 cgaagacggt cggcctgcaa ttcccggtcg gtttgcgtac gaaggccgtg gagttggcgc
     1081 aggaactcga agcgaaggcc ggcgtcacgt gcctcgtctc ggcggacccg tcgttcggtg
     1141 cgtgcgacgt ggcggatatg cccgtggacc tcatcgtcca cctcgggcat gcgccgatgc
     1201 cccacctccg gtacaaccgc gtcttcttct tcgatctccc cggaccctcg ctcggctcga
     1261 tggccttcat cgacg
//
LOCUS       DATLMA010000573         2103 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_57924, whole genome shotgun sequence.
ACCESSION   DATLMA010000573 DATLMA010000000
VERSION     DATLMA010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57924"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VNA10_07380"
     CDS             <1..380
                     /locus_tag="VNA10_07380"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HVG37540.1"
                     /translation="GMKGARFHGDLEMPKGALVLSKGMDPEQDSYSGFQAFSDRGRDL
                     ESTLHELDVDELFICGLATDYCVRATALDGLRRGLDVRVLRDAIRGVDLKSGDSEMAI
                     KEMRLNGVRFSESRGLARLLRKD"
     gene            518..946
                     /locus_tag="VNA10_07385"
     CDS             518..946
                     /locus_tag="VNA10_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009777183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37541.1"
                     /translation="MAGKGKSGGAGEGTREHPWHLKTPSGTSEFQAFRDEALDPPALV
                     VKSGSTELRYHLRCINDLHAMLKSRGDWMPLGSADEQKPATDGTVEAWGRSTKNPVGG
                     WYGLKKGLRGRFGMYVPPVLEALHLAEVEHNPKNNRMRAL"
     gene            1130..1447
                     /locus_tag="VNA10_07390"
     CDS             1130..1447
                     /locus_tag="VNA10_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HVG37542.1"
                     /translation="MPSESERVTIRIPPDKIKALHQLVKSGDYTTISDAIRAAIDRFI
                     DVKFAPDYIRKLMIELPKGNVVDLQQLVKSGDSVSVEDAVRNAVREYVRRRLHKAIEG
                     AER"
     gene            1529..>2103
                     /locus_tag="VNA10_07395"
     CDS             1529..>2103
                     /locus_tag="VNA10_07395"
                     /inference="COORDINATES: protein motif:HMM:NF012320.4"
                     /note="GTPase; similar structure to tubulin; forms
                     ring-shaped polymers at the site of cell division; other
                     proteins such as FtsA, ZipA, and ZapA, interact with and
                     regulate FtsZ function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HVG37543.1"
                     /translation="MGLETAQRTGNQSFLDSFGFARPKVLVIGCGGAGGNSVHRLHRM
                     GIHGARTVVVNTDAVHLDSIQADRKLLIGRGVTHGMGAGGRPEIGERCAEISEQELRN
                     QIGDADLTFITVGLGGGTGTGVAPHVAELAQAAGSVVISLATTPFRAERGRMANARAG
                     IQRLRDRTDSLILLDNNRLLDLVPNLPVEQA"
BASE COUNT          416 a          625 c          718 g          344 t
ORIGIN      
        1 aagggatgaa aggcgcccgg tttcatggag accttgagat gccgaaaggc gccctcgtcc
       61 tctcgaaggg aatggatccc gagcaggact cgtactctgg gtttcaggcg ttcagcgatc
      121 gcggtcgaga tctcgagtcg accttgcacg agctcgatgt ggacgaactg ttcatctgtg
      181 gtctcgcgac ggactactgt gtgcgggcga cggccctcga tggcctgcga cgagggcttg
      241 acgtccgcgt gcttcgtgac gcgatccgcg gagtcgatct caaatccggc gactcagaga
      301 tggcgatcaa ggaaatgcgc ctcaatggag ttcgcttttc ggagagtcgc gggctcgcga
      361 gactcctacg gaaggactga atcactccat aggcgccgtc acctgaaggc ggcgaatcgt
      421 tgaaatagag cggggcggtt cgttcgacgc ctctcgcgag ccgatcattc aacggtgctc
      481 ggggacggtc gacgacgaac gggtttgggg caggaccatg gccggaaaag ggaaatcagg
      541 cggagcgggc gagggaacgc gagagcatcc gtggcatctg aagacgccga gcgggacatc
      601 ggagttccag gcgtttcggg acgaagcctt ggatccgcct gcgctcgtcg tcaagtcggg
      661 gagtacggaa ctccggtacc acctccgatg catcaacgac ctgcacgcca tgctgaagtc
      721 ccgcggcgac tggatgcccc tgggaagcgc ggacgaacag aagcccgcca cggacgggac
      781 ggtcgaagcc tggggccggt cgacgaagaa cccggtcggc gggtggtacg gactgaagaa
      841 aggattgcgc gggcggttcg gaatgtacgt gccgccggtc ttggaagccc tccacttggc
      901 ggaagtcgaa cacaatccga aaaacaaccg gatgagggcg ctgtagcctc cccgccggcg
      961 caggcactac gcttgccggc tccacccgct gacagcggtc ctctttcgga tcgtccgccg
     1021 gctctccgtc aacaccgcac aaccgtctgg acagcacgtt tatataacgc cgttgccata
     1081 cgattgtcag acaaaattac ccgagatgtc ggacgcggac taggtccata tgccatcgga
     1141 atccgagcgg gttacgatcc gaattccccc ggacaagatc aaggcgctgc atcagctcgt
     1201 gaagagcggc gactacacga cgatttccga cgcgatccgc gcggcgatcg atcggttcat
     1261 cgacgtgaag ttcgcgccgg actacatccg caagctcatg atcgaactgc cgaaggggaa
     1321 cgtggtcgac cttcagcagc tcgtgaagtc gggcgactcg gtgtcggtcg aagacgcggt
     1381 ccgcaacgcg gtccgggagt atgtccgacg tcggctccac aaggccatag aaggggccga
     1441 gcgataggtc gacgtggcgg gaacgcgcga ccccttaggc gcgcgagcag ggcggcccga
     1501 tgcggggccg ttcgggatgg aatcagggat gggcctcgag acggcgcagc gcaccgggaa
     1561 ccagtcgttc ctcgactctt ttggcttcgc acgtccgaag gtcctcgtga tcggctgcgg
     1621 gggcgcaggc gggaactccg tccatcggtt gcaccgcatg gggatccacg gggcccggac
     1681 ggtcgtcgtg aacacggacg cggtgcatct cgattcgatt caagcggacc gcaagctcct
     1741 gattggccga ggcgtgacgc acggcatggg ggccggcggt cgaccggaaa tcggagaacg
     1801 gtgcgccgaa atctcggaac aagaactccg caaccagatc ggggacgcgg acctgacgtt
     1861 catcacggtc ggactgggcg gcggtaccgg gaccggggtc gcgccgcacg tggcggaatt
     1921 ggctcaggca gcggggagcg tcgtcatcag cctggccaca acgccgttcc gggcggagcg
     1981 cggacggatg gcgaatgcgc gcgcgggcat ccaacggctc cgggaccgga cggattcgct
     2041 gatcctcctc gataacaacc gcttgctcga tctcgtcccg aacctcccgg tcgagcaggc
     2101 ctt
//
LOCUS       DATLMA010000574         1395 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_538128, whole genome shotgun sequence.
ACCESSION   DATLMA010000574 DATLMA010000000
VERSION     DATLMA010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538128"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1162)
                     /locus_tag="VNA10_07400"
     CDS             complement(<1..1162)
                     /locus_tag="VNA10_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37544.1"
                     /translation="MSKADERNARALTLLIVWSVALGGLFATLLALTPAARAGTCDQV
                     GGVITGDWTITNTQVCSGILYSVDGTINVNSGGSLTLTGGGLSFSKDTSHEGYALNVN
                     AGGELVLDNSIVTTQTDSIAPFLKLALTVSGANSHFAMKNGAILKFPGWFNATSATIN
                     VTDSKITGFTDSEISNLGINTDDNNDAPLMAWATTTADVYRSRIERLYEYTGGTAGNL
                     VLTATSNLYSYDSFLGVDYSNTAAVHNELRVDGTSNAYLYNVTMDRTQDPAAKSDWVP
                     AFRPTAAGGNVDFMRWLYATVVDSSGIPVSGATVWSTLSPSSTTAQYPDNALATTPTP
                     RTVWYLGRTAGGANAWNRTDANGLALIPLFTDQITTASLPNAESFGNYHQQVT"
BASE COUNT          240 a          414 c          460 g          281 t
ORIGIN      
        1 acgtcacctg ctggtggtag ttcccgaagg actcggcgtt cggcaggctg gccgtcgtga
       61 tctggtccgt gaagagaggg atgagcgcga ggccattcgc gtcggtccgg ttccaggcgt
      121 tcgctccgcc cgcggtccgg ccgaggtacc aaacggtgcg gggcgtcggc gtcgtcgcga
      181 gcgcgttgtc cggatattgc gcggtcgtgc tgctcgggct gagcgtcgac cagacggtcg
      241 caccgctgac cgggattccg ctcgaatcga cgacggtcgc gtacagccat cgcatgaagt
      301 cgacgttccc gcccgcggcc gtcggccgga acgccgggac ccaatccgat ttcgcggcgg
      361 ggtcttgcgt ccggtccatc gtcacgttgt acaggtacgc gttcgaggtc ccgtcgacgc
      421 ggagctcgtt gtgcacggcg gccgtgttgg aataatcgac cccgaggaat gagtcgtagg
      481 agtagaggtt gctcgtcgcg gtcagcacga ggttccccgc tgtgccgccg gtgtactcat
      541 agaggcgctc gattcgggac cggtacacgt cggccgtcgt ggtcgcccat gccatcaggg
      601 gcgcatcgtt gttgtcatcc gtgttgatgc cgagattgga aatctccgaa tccgtgaagc
      661 cggtgatctt cgagtccgta acgttgatcg tcgcgctggt cgcgttgaac caacctggga
      721 acttcaggat ggccccgttc ttcatcgcga agtggctgtt cgctccggag acggtcaggg
      781 cgagcttgag gaagggagcg atcgaatcgg tctgtgtcgt gacaatcgaa ttgtcgagga
      841 cgagttcgcc gcccgcgttc acgttgagcg cgtagccttc gtgcgaggtg tctttcgaga
      901 aactcaggcc gccgccggtc aacgtgagac tgcctcccga gttcacgttg atcgtgccgt
      961 cgacggagta gaggatgccg ctgcacacct gcgtgttcgt gatggtccag tcgccggtga
     1021 tcactccgcc aacctggtcg caggtcccgg cgcgggccgc cggggtcagc gcgaggaggg
     1081 tcgcgaacag tccgccgagg gcgaccgacc aaacgatgag gagggtgagc gctctcgcat
     1141 tccgttcgtc ggccttagac atccgaagac tccctcacgt tgaggcaccg ggctaccccg
     1201 tgagaaacga gaccggtggg catgatgcgc tgcccatccg gggcggattc ttaaaaaggt
     1261 tctcggatga ttatccaacc cgatacgtat ctgttctcac atcggaaaac attccgcttc
     1321 gtccgcgaac gtgatttcca tattcagtcc tgaataaaaa ccgttcaatc tcccgaaaag
     1381 gccggcgcgc cgaca
//
LOCUS       DATLMA010000575         1195 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_58359, whole genome shotgun sequence.
ACCESSION   DATLMA010000575 DATLMA010000000
VERSION     DATLMA010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58359"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VNA10_07405"
     CDS             complement(<1..557)
                     /locus_tag="VNA10_07405"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HVG37545.1"
                     /translation="MAWKDPYAILGVRRGAPLSEIKRAYRKLAFSAHPDVGDNPDVQR
                     FREVHEAYESLNEMEQRRPRRIKVVRAPDRSGYAGTTQVEPRGRPEPIRRRRPVNIID
                     DFGIVSPSVGEILDHIAQNFFGFHQKSRGSRRHLGVEIVLDTREAFFGVTVPIEMPVY
                     VRCGRCGSSGGEWSVCPLCHGYGMM"
     gene            complement(582..980)
                     /locus_tag="VNA10_07410"
     CDS             complement(582..980)
                     /locus_tag="VNA10_07410"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HVG37546.1"
                     /translation="MTEQEIAAKEKQQVPGQEKTRAGRFFLPGVDIYEFDDSIKLWAD
                     MPGVKESDVEVTLKEGVLTIIGTVSTETYEKLSPLYTEYNVGNYFRQFELNEDVDDKH
                     IEALMRNGVLELTLPKGERAQARRIEVRTG"
     gene            complement(1031..>1195)
                     /locus_tag="VNA10_07415"
     CDS             complement(1031..>1195)
                     /locus_tag="VNA10_07415"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HVG37547.1"
                     /translation="HRRERPFGEFSRSVQLPDELDLAKAAARYEAGMLTVRVPKAESA
                     KPRQIAVNPA"
BASE COUNT          203 a          402 c          332 g          258 t
ORIGIN      
        1 tccatcatcc catatccatg gcatagcggg cacacgctcc actccccgcc gctgctcccg
       61 catcggccgc atcgcacgta tacgggcatt tcgatcggca cggtgacgcc gaagaaagcc
      121 tcgcgcgtgt cgagcacgat ctcgacgccc aggtgccggc gtgagccgcg gctcttttga
      181 tggaaaccga agaagttctg cgcgatatgg tcaaggattt cgccgaccga cggacttacg
      241 attccgaagt cgtcgattat gttgaccgga cgtctccgcc gaatcggctc gggacgtccg
      301 cgcggctcca cctgcgtggt ccccgcgtag ccagagcggt ccggcgcccg cacgaccttg
      361 attctgcgcg ggcgccgttg ctccatctcg ttcaggcttt cgtacgcctc gtgcacctcc
      421 cgaaagcgct gcacatccgg gttgtcgccg acgtcgggat gggcgctgaa agcgagcttc
      481 cggtaggcgc gcttgatctc tgaaagcggc gcgccacgcc tcacgccgag gatcgcatac
      541 gggtccttcc acgccatcaa tcgagattcc tccgttcgac gtcagcccgt cctgacctcg
      601 atccggcgag cctgcgcgcg ctcgcccttg ggaagcgtaa gctcgagcac tccgttcctc
      661 atcaaggcct cgatatgctt gtcgtccaca tcctcgttca attcgaactg cctgaagtag
      721 tttccgacgt tgtactcagt gtatagcggc gacaacttct cataagtctc ggtcgacacg
      781 gtaccgatga tagtaagaac gccctccttg agcgttactt cgacgtcgct ctccttcact
      841 cccggcatat cggcccaaag cttgatcgag tcgtcgaact cgtagatatc gacgccgggc
      901 agaaagaaac ggcccgcgcg agtcttctcc tggcccggta cctgctgctt ttccttcgcg
      961 gcaatttcct gttcggtcat tgtcggtttc ctcctttaaa gggtgcctcg aatccttcgc
     1021 ccgaatggtc ctaagccggg ttcaccgcga tctgacgcgg ctttgccgac tccgccttgg
     1081 gcaccctaac cgtcagcatc ccggcctcgt atctggcagc cgccttggcg agatcgagtt
     1141 catcggggag ttggacggac cgcgagaact ccccgaacgg tcgttcgcgc cggtg
//
LOCUS       DATLMA010000576         1408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_180829, whole genome shotgun sequence.
ACCESSION   DATLMA010000576 DATLMA010000000
VERSION     DATLMA010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180829"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VNA10_07420"
     CDS             complement(<1..184)
                     /locus_tag="VNA10_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37548.1"
                     /translation="MAGIRGLWTILGSVGDPEEREDLALVATAIQVHFASRVARERAV
                     VEFMAIRFRWPASRTRR"
     gene            287..778
                     /locus_tag="VNA10_07425"
     CDS             287..778
                     /locus_tag="VNA10_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018193163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine-specific kinase"
                     /protein_id="HVG37549.1"
                     /translation="MPVETELVPIENPDGLNVILGQTHFIKTAEDVHEALVGSVPGIK
                     FGVAFCEASGPALVRVEGNDDTLKRLAAKNALAVGAGHFFVVFMKDAYPINVLRALRD
                     VPEIVTVYAATSNPVDVVVATTRRGRGVLGIVDGERTKGLETEKDRAERIAFLRKIGY
                     KLG"
     gene            780..>1408
                     /locus_tag="VNA10_07430"
     CDS             780..>1408
                     /locus_tag="VNA10_07430"
                     /inference="COORDINATES: protein motif:HMM:NF024628.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HVG37550.1"
                     /translation="MCRMLAIVSRKTAPVDTLMAFGQLADTGRNFRDFGCPQPNPKSG
                     HPDGWGIACVGQEGEFYARGPGRATVDPKYEDAVRRLSRVCSPPLILVAHLRYASKKD
                     TIQERYSHPFRREVDGRVMFFAHNGEIEDFGVREGKIDTQFIYDRFVDSLGVEQRPLA
                     EFKQAIAKAKAAIDVEFPRKVESYTFLLIDGDRVIAHRDARTCVPYYTL"
BASE COUNT          262 a          458 c          444 g          244 t
ORIGIN      
        1 gtcgacgcgt ccgcgacgcc ggccaccgaa accgaatcgc catgaactcc accaccgccc
       61 gttcccgagc gacgcggctc gcgaagtgca cttggatcgc ggtcgcgacg agcgcgaggt
      121 cttcccgttc ctccggatcg ccgacgctgc cgaggatcgt ccatagccct ctgattcccg
      181 ccatgcggca tcgatcgatt tccgacgccc tgtcccttcc gcgtgcaggt agtgtacctc
      241 cacttcgtga agaagacttt aattcacgcg acccgataca ttgccgatgc cggtcgagac
      301 ggaacttgtc cccatcgaga acccggacgg gttgaacgtg atcctcggtc agacccactt
      361 catcaagacg gccgaggacg ttcacgaggc gctcgtcggg tccgtccccg ggatcaagtt
      421 cggcgtcgcg ttctgcgagg cgtccgggcc ggcgctcgtc cgggtcgaag gcaacgatga
      481 caccttgaag aggctcgccg caaagaacgc cctcgccgtc ggagcgggcc acttcttcgt
      541 tgtgttcatg aaagacgcct acccgatcaa cgtcttgcgg gccctgcgcg acgtgccgga
      601 aatcgtgacc gtgtacgcgg cgacctcgaa tcccgttgac gtcgtcgtcg cgacgacccg
      661 ccgcggtcgc ggcgtcctgg gaatcgtcga cggtgagcgg acgaaaggcc tcgagacgga
      721 gaaagaccgg gcggagcgca tcgccttcct ccggaaaatc gggtacaagt tgggctgaca
      781 tgtgccggat gctcgccatc gtgagccgga agaccgcgcc cgttgacacg cttatggcgt
      841 tcggacagct cgccgacacg gggaggaact tccgggattt tggatgtccc cagccgaacc
      901 cgaaatcggg ccaccccgac ggctggggca tcgcgtgtgt cggtcaggag ggcgagttct
      961 acgcccgagg gcccggccgg gcgacggttg atccgaagta cgaagacgca gtgcggcggc
     1021 tgtcccgggt gtgcagtccc ccgctgatcc tcgtagccca ccttcgttat gcatcgaaaa
     1081 aggacacgat ccaagagcgg tattcccatc cgttccgccg cgaagtagac ggccgggtga
     1141 tgttcttcgc ccacaacggc gagatcgagg acttcggggt ccgcgagggg aagatcgaca
     1201 cgcaattcat ctacgaccgg ttcgtggatt cgctcggagt cgaacagcgg ccgctcgccg
     1261 agttcaaaca ggcgatcgcg aaggcgaagg ccgcgatcga cgtggagttc ccgcggaaag
     1321 tcgagtcgta cacgttcctg ctaatcgatg gcgaccgcgt gatcgcacac cgggacgccc
     1381 ggacctgcgt tccttactac accctgca
//
LOCUS       DATLMA010000577         1289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_539203, whole genome shotgun sequence.
ACCESSION   DATLMA010000577 DATLMA010000000
VERSION     DATLMA010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539203"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="VNA10_07435"
     CDS             <1..685
                     /locus_tag="VNA10_07435"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HVG37551.1"
                     /translation="VGKFVFWRNGAQGDAYFSLIASGHNAWWPHYNAGKRKMEDGDFV
                     LMDYAPDVGYYESDVTRMWPVNGTFAPWQRELYGFYRACYEAILKSIRPGVDAGTIMK
                     EALKQMDRELATAKFSKEIYRKAAESFVKDYRESAGKPDASLGHWVGMATHDDGPHAG
                     PLKPGMVFTIEPALRVPEEKVYVRLEDVIVITAKGAEVLSDFVPRDIEAIEKVMKEEG
                     LLERYPRAD"
     gene            738..>1289
                     /locus_tag="VNA10_07440"
     CDS             738..>1289
                     /locus_tag="VNA10_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37552.1"
                     /translation="MERIVESRSPVQTRLPLAARFGAFVAERFPFALAPAFEAFRSVS
                     PSDPGRDEAAIEALRRPVSEALLRAIDHLPAESFGDTVPGVTVETRMQQAKTELLEAC
                     DGFLRREAIEASLTREERIEILRGMILTRATDNRLKAFFSGGEVRYGGAPFQGKGFRS
                     LGQEAIYASAIRLRRGEAYRAPDG"
BASE COUNT          227 a          415 c          441 g          206 t
ORIGIN      
        1 ggtcggcaag ttcgtcttct ggcgaaacgg cgcacagggc gacgcgtact tctcgctgat
       61 tgccagcggc cacaacgcct ggtggccgca ctacaacgcc ggcaaacgca agatggagga
      121 cggcgacttc gtgctgatgg attacgcgcc ggacgtgggc tactacgaga gcgacgtgac
      181 gcggatgtgg ccggtcaacg gaacgttcgc cccgtggcag cgggagctgt atggcttcta
      241 ccgcgcctgc tacgaggcga tcctgaaatc aattcgtccc ggcgtcgacg ccgggaccat
      301 catgaaagaa gcattgaagc agatggaccg ggagctcgcg accgcgaaat tctccaagga
      361 gatctaccgg aaggcggcgg agagcttcgt gaaggactac cgggagtctg ccggaaagcc
      421 ggacgcctct ctgggccact gggtcggcat ggccactcac gacgacggcc cgcacgccgg
      481 gcccttgaag cccggaatgg tgttcactat cgagcccgcg ctgcgcgtgc cggaggaaaa
      541 ggtctacgtg cgcctggagg acgtcatcgt catcacggcg aagggcgcgg aagttctctc
      601 cgatttcgtt ccccgcgaca tcgaagcgat cgagaaggtc atgaaggaag aaggactgct
      661 ggagcgctac ccgcgcgccg actgaaactc aggcgggcaa tgtggcaagt ggagacctga
      721 ccccttaata tcctccgatg gaacggatcg tcgagtcgcg gtcacccgtc cagacgcgcc
      781 ttcccctcgc ggcgcggttc ggggcgttcg tcgcggagcg gtttccgttc gcgctcgctc
      841 ccgcattcga ggccttccgc tcggtctccc cctccgatcc cggccgcgac gaggccgcca
      901 tcgaagcgct gcggcgcccc gtgtccgagg cgctgctccg cgccatcgat caccttcccg
      961 ccgagtcgtt cggggacacg gtccccgggg tgaccgtcga aacgcggatg cagcaggcca
     1021 agacggagct gctcgaagcc tgcgacgggt ttctgcggcg cgaggcgatc gaggcgtcgc
     1081 tcacgcgcga ggagcgcatc gaaatcctgc gcggcatgat cctgacgcgc gcgaccgaca
     1141 accggttgaa ggcgttcttc tcgggcggcg aagtccggta cggaggggcg ccgttccagg
     1201 ggaagggctt ccggtccctc ggccaggagg cgatctacgc gtcggccatt cgcctccgtc
     1261 gcggcgaggc gtatcgcgcg ccggacggc
//
LOCUS       DATLMA010000578         2669 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_661922, whole genome shotgun sequence.
ACCESSION   DATLMA010000578 DATLMA010000000
VERSION     DATLMA010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661922"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..1218)
                     /locus_tag="VNA10_07445"
     CDS             complement(205..1218)
                     /locus_tag="VNA10_07445"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HVG37553.1"
                     /translation="MRLVRFSTAGGPPRLGAVLGRWDHWEKIVDLSAVDSVIPADTLA
                     FIDACPGLKGDVWDRALRVLAEAGKIESDAPLWAFRPGDVRILSPIAPRLLRDFLAFR
                     AHVARTRAAAWAQIPPEWDALPAYYNGNPLNVVGTKEAIPPMRFETFEGRTPRLVPSA
                     KMDYEAEIGFVLGEGGRDIDAAQANAHLFGVTIFNDFSARDLQATASRTGMGPAPGKD
                     WANALGPCIVTRDEFGELRDQAIVVRVNNEERLRDRYRALVHENPWVREGQRALWSFP
                     EMLEFLSRFQPIHAGEVWGSGTIPGGCELERGDRARYLKPGDRIEIEIEGIGVLENSI
                     APA"
     gene            complement(1289..2542)
                     /locus_tag="VNA10_07450"
     CDS             complement(1289..2542)
                     /locus_tag="VNA10_07450"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HVG37554.1"
                     /translation="MAMIVRKGTVPSTPHTEFYAIPNVLAREEIHGSYGFSGAWSRKL
                     HVRFYPTEQVKAPTKGRFDLVPEFPPEADVLQPYHIFTGRIPFEGNALSSRKPIVHGP
                     RTSISVSKPIESMPKDTFFRNGERHEVYFVQDGEGVVRSEYGDLKFRKDVYVAIPKGT
                     TYRIDLTSPKAWFLLVESIYPITFAPHYLNKEGQATLMSPVVETEIETPDLPPFTDQR
                     GEFPIDVKHGGGKITRITLGHHPFDLAGWEGALYPFVFDIKSHHGIAREIHTAPPMHQ
                     TFQSGNVPHSGFSLCSFVPVMAGWHPREVPAPYAHFNVDSDELMFFCNAFYGAREGVI
                     EEGSFTFHPGSTPHSPQGNAAQRSLAARGKVQARLAVMLDTYFESMRITTQGFAYRDP
                     AYVLSWSENIQRAQPAGEGWESPSA"
BASE COUNT          465 a          865 c          854 g          485 t
ORIGIN      
        1 ctcatagacc ggcgagtatc cgctgttcag caggaagtcc cgcagcgcac ggtacgtgtt
       61 ggtatctcga cacaggaccg tcttgtggtc cactttgagt ttcaggaacg cgggaagggc
      121 cgccattcgc tcaccggctg cgaatcgaaa tgtgggacga taaccctttc gtggcacgcc
      181 atctcacgga cgcgagagac ggtttcaagc gggcgcaatc gagttctcga ggaccccgat
      241 tccctcgatc tcgatttcga tgcgatcgcc aggtttgagg tagcgggctc ggtcgcctcg
      301 ttccagctcg caaccgccgg ggatcgtccc gctgccccac acttcacccg catggatggg
      361 ctggaaccgg gagaggaact caagcatctc tgggaacgac cagagggctc gctgaccttc
      421 gcggacccat gggttctcat ggacaagggc gcggtaccga tcgcggagcc gttcctcgtt
      481 gttcacccgc acgacgatcg cttggtcccg cagctctccg aactcgtccc gggtcacgat
      541 gcacggaccg agggcgttcg cccaatcctt ccctggagcc ggccccatgc cggtgcggct
      601 cgccgtcgcc tggaggtccc gcgccgagaa atcgttgaag atcgtgacgc cgaagagatg
      661 ggcgttggct tgcgccgcgt cgatgtcccg cccgccctcg ccgaggacga agccgatctc
      721 cgcctcgtaa tccatcttgg ccgatgggac gagccgcgga gtccgtccct cgaacgtctc
      781 gaagcgcatc ggagggatgg cctccttcgt cccgacgacg ttcaacggat tgccgttgta
      841 gtacgcaggc agcgcgtccc actcgggcgg gatctgtgcc cacgccgccg ccctcgtgcg
      901 cgcgacgtgg gcccgaaacg cgaggaagtc tcgcagcagc cgcggggcga ttggcgaaag
      961 gatccgcaca tcgcccggtc gaaacgccca cagcggggcg tcggactcga tcttcccggc
     1021 ctcggcgagc acccgcagcg cccggtccca tacgtcgcct ttcaacccgg ggcacgcatc
     1081 gatgaacgca agcgtgtccg ccgggatgac ggaatccacc gcggagaggt cgacgatttt
     1141 ttcccagtgg tcccaccggc cgaggaccgc gcccaggcgg ggaggccctc ccgccgtgga
     1201 gaatcgcacg agcctcatgc gcgcctccgc gctgctcgaa tcccgaatcg aatccgaacc
     1261 ggccggagga ccacggtctc acctcggttt aggcggaagg cgattcccag ccttcgcccg
     1321 ccggttgggc ccgctggatg ttctcggacc agctcaggac gtacgcggga tcgcggtacg
     1381 cgaagccttg ggtcgtgatc cgcatgctct cgaagtacgt gtcgagcatg accgcgaggc
     1441 gcgcctgcac ttttccccgg gccgcgaggg accgctgggc tgcgttcccc tggggactgt
     1501 gcggtgtcga tccgggatgg aatgtgaacg aaccttcctc gatgacgcct tcgcgggcgc
     1561 cgtagaaggc gttgcagaag aacatcagct cgtccgaatc gacattgaag tgcgcatacg
     1621 gggccgggac ctcccgcgga tgccaaccgg ccatcacggg gacgaacgag cagagggaga
     1681 agccgctgtg cgggacgttc cctgattgga atgtctggtg catcggaggg gccgtgtgga
     1741 tctcccgcgc aatgccgtga tggctcttga tgtcgaagac gaacgggtac agggctcctt
     1801 cccacccggc cagatcgaac gggtggtggc ccagggtgat ccttgtaatc ttcccgccgc
     1861 catgcttcac gtcgatcggg aattcccctc gttgatccgt gaatggcggc aagtctggtg
     1921 tctcaatttc agtctcgacg acgggcgaca ttagcgtggc ttggccctcc ttattcaagt
     1981 agtgcggcgc gaacgtgatc gggtagatcg actccaccag gaggaaccac gctttcggcg
     2041 aggtgaggtc gattcggtac gtcgtcccct tcgggatcgc gacgtagacg tctttgcgaa
     2101 acttcaggtc tccgtactcg gagcgcacga cgccctcgcc atcctggacg aagtacactt
     2161 cgtgtcgctc tccgtttcga aagaacgtgt ccttcggcat cgactcgatc ggcttcgaga
     2221 ccgagatcga cgtgcgaggc ccgtgcacga taggctttcg cgaggagagg gcatttccct
     2281 caaacggaat ccgcccggtg aagatgtggt acggttggag cacgtccgct tcaggcggga
     2341 actccggcac gagatcgaaa cgccccttcg tcggggcctt cacctgttcc gtcggataga
     2401 agcgcacatg gagcttccgc gaccacgccc cgctgaagcc gtacgaccca tggatttctt
     2461 cccgggcgag gacgttcggg atcgcgtaga actcggtgtg gggggtcgac ggcacggtgc
     2521 ccttccggac gatcatcgcc atcgtggcct cctccgcccg cggagataac ggcgcctcga
     2581 cttaaacccg cgggacctca cgcacgccgg cgggattgcg cgtatcgaat gccgcctccc
     2641 gcaaggagga cctcccgctg gtacggacg
//
LOCUS       DATLMA010000579         1764 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_539414, whole genome shotgun sequence.
ACCESSION   DATLMA010000579 DATLMA010000000
VERSION     DATLMA010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539414"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..650)
                     /locus_tag="VNA10_07455"
     CDS             complement(111..650)
                     /locus_tag="VNA10_07455"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HVG37555.1"
                     /translation="MRRTMCPGVCKDRLADAFERFGRVPIEKRKLVVPPDHSAFRAAE
                     DPFWSAGGLLHDGRGRVLLIRHVPGAGWGDAWVTPGGRLEEGETTVDGLRREVREEVG
                     VDVLKPMLTRILQQTLSDGSRVRHGYFAQFVARASSIEPRPGPDVREAHWFEMLPPDM
                     AYREDYLADFARFVRPATF"
     gene            711..932
                     /locus_tag="VNA10_07460"
     CDS             711..932
                     /locus_tag="VNA10_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010901832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HVG37556.1"
                     /translation="MPLEDVSDRANKVYETMKSAGITSEDKMRDAEAITKMSKLGKNF
                     VLQALQELQSKGYAKRRAREKAAGYWLIK"
     gene            complement(942..>1764)
                     /locus_tag="VNA10_07465"
     CDS             complement(942..>1764)
                     /locus_tag="VNA10_07465"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019176817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HVG37557.1"
                     /translation="EILRTMFRRTRCTTFLSFPAALMATGVRGVLRALVQQRLVDVVV
                     TTCGTADHDLARVWQPYYHGDFEMDDVALHRLGVNRLGNVLIPNASYGVVLEKKIQPM
                     LRDLWKSGVRTPSTSELLWELGRRAGSRQSLLWWAWKNRIPVFVPAIFDGAVGYQLWS
                     FWQEHKEFAINQFRDEADLADVVFKAKETGALMIGGGVSKHHTIWWNQFRGGLDYAVY
                     ITTAPEWDGSLSGARVREGISWGKVKETARQVTIEGDASALLPLMVAAALHRPHR"
BASE COUNT          335 a          587 c          549 g          293 t
ORIGIN      
        1 cccgtccggc actccgagcg ccccacccgg gcagaagtca ttctgaatgt cgacaacgag
       61 gagcgccggc ctaggtccca cggtcccgac cccgccatcc gagggattcg ctaaaaggtt
      121 gcgggccgga cgaaccgcgc gaaatcggcg aggtagtcct cgcgatacgc catgtctggc
      181 ggcaacattt cgaaccagtg cgcttcccgg acgtcaggac ccggacgcgg ctcgatggac
      241 gaggctcgcg cgacgaattg tgcgaagtat ccgtgtcgca cccgacttcc atcggaaagg
      301 gtctgctgga gaatgcgggt gagcatcggc ttcagcacgt ccacgccaac ctcctcgcgc
      361 acttcgcggc ggagtccgtc caccgtggtc tccccctcct ccaagcgacc gccaggagtg
      421 acccacgcgt ccccccagcc cgcgccgggg acatggcgga tcaggaggac gcgacctcgg
      481 ccgtcgtgga gaaggccgcc ggcggaccag aacgggtctt cggccgctcg gaacgcggag
      541 tggtcaggcg ggacgacgag cttccgcttc tcgattggaa cgcggccgaa ccgctcgaac
      601 gcatccgcga gtcggtcctt gcagaccccg gggcacatcg tccgtctcaa ggatggaaag
      661 cttatttaac accgccccga gttgctggcc cgcgcacgga gggttcgcgc gtgcccctcg
      721 aagacgtttc tgaccgagcc aacaaggtct acgagacgat gaagtccgcc ggcatcacgt
      781 cggaggacaa gatgcgcgac gcggaggcga tcacgaagat gtccaagctc gggaagaatt
      841 tcgtcctcca ggcgctccag gaattgcagt cgaagggtta cgcgaaacgc cgggcgcgcg
      901 agaaagccgc gggctactgg ctcatcaagt gaccgttcgg atcatcggtg ggggcggtgg
      961 agcgccgcgg cgaccatgag gggcaggagc gcggatgcat ctccctcgat cgtgacctgc
     1021 ctcgcggttt ccttgacctt gccccacgag atcccttcgc gaacgcgggc cccgctcaaa
     1081 ctcccgtccc actccggagc tgtcgtgatg tagacggcat agtcgagccc gccacggaac
     1141 tggttccacc agatcgtgtg atgcttcgag acaccacccc cgatcatcag cgcgcctgtc
     1201 tctttcgctt tgaagacgac gtcggcgagg tccgcttcgt cccggaactg gttgatcgca
     1261 aactccttgt gctcctgcca aaacgaccac agttgatacc cgaccgcccc gtcgaagatc
     1321 gctggtacga acaccggaat gcggttcttc caggcccacc acagcaggga ttggcggctt
     1381 cccgcgcgtc gcccgagctc ccagaggagt tcgctcgtcg acggtgtcct cacgccggat
     1441 ttccagaggt cgcgcaacat cggttggatc tttttctcca atacgacgcc gtatgaagca
     1501 ttcgggatca ggacgtttcc gagccgattc acgccgaggc gatgcagggc gacatcgtcc
     1561 atttcgaagt cgccgtggta gtacggctgc cacacccgcg cgagatcatg atcggccgtg
     1621 ccgcacgtcg tcaccacgac atcgacgagc cgctgctgaa cgagggcccg taggacgccg
     1681 cggacccccg tcgccatcag tgcagcggga aatgaaagga aggtcgtgca cctcgtgcgg
     1741 cggaacatcg tccggaggat ctcc
//
LOCUS       DATLMA010000580         1489 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_662080, whole genome shotgun sequence.
ACCESSION   DATLMA010000580 DATLMA010000000
VERSION     DATLMA010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_662080"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1157
                     /locus_tag="VNA10_07470"
     CDS             <1..1157
                     /locus_tag="VNA10_07470"
                     /inference="COORDINATES: protein motif:HMM:NF045168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peroxidase"
                     /protein_id="HVG37558.1"
                     /translation="VANFGLSATGYRALGLLPEDFGGSGQSFRNGMKLRAFSLLSRNR
                     DPPSGEWEAPYQGDIHALVSLSHDSTEDLAAKTREVSEGLRQIADVLTVERGTVLRNA
                     RGDPIEHFGYVDARSQPLFLQADIDAEKEAGVDAWDPSAPLGLVLVDDPFTSEADAFG
                     SYLVFRKLQQDVANFNAGVKDLATRLAADEALTGALVVGRFKDGSPVTLRPWDGLGPV
                     NNFEYLAHDRVGNRCPFHAHIRKANQRGANPFLDSDQERSHRIVRRGIPYGVRPAPSG
                     GASTAASPAGELGLLFQAFQSDIARQFEFIQRTWVDNPNFPELLLFPGLNTGDDALIG
                     QHPRAAQKWPRTWGRSGRVLDRLRFNFGDYVRLRGGEYFFAPSLSFLKNL"
     gene            complement(1230..>1489)
                     /locus_tag="VNA10_07475"
     CDS             complement(1230..>1489)
                     /locus_tag="VNA10_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37559.1"
                     /translation="RIGIPVRTSALSLHRWVPTGTRIRIAGRAKSTGPSSLTVALEAS
                     TSDGQPVATLDRDFVLPNRREFLEKMGYAEIPEAFAGLIPE"
BASE COUNT          266 a          479 c          460 g          284 t
ORIGIN      
        1 tcgtcgctaa tttcggtctt tccgcgacag gctatcgggc actgggtctg ctcccggagg
       61 acttcggcgg ttccgggcag tccttccgca acgggatgaa acttcgggcc ttctctctcc
      121 tctcgaggaa tcgggatcct ccatcgggag agtgggaggc gccctatcag ggagatatcc
      181 acgccctcgt gagcctgtcc catgattcta ccgaggacct tgcagcgaaa acgcgcgagg
      241 tgtccgaagg ccttcggcaa atcgcagacg tcctcaccgt cgaacggggc actgtcttga
      301 ggaacgcgcg aggagatccg atcgaacact tcgggtacgt tgacgcgcgg agccaacccc
      361 tcttcctgca agcggacatc gacgcagaga aagaggcggg cgttgacgct tgggatccgt
      421 ccgcaccgct cggattggtc ttggtcgacg atccgttcac gagcgaagcg gatgcattcg
      481 gaagctacct cgtcttccga aagctccagc aggatgtcgc gaacttcaac gcgggcgtga
      541 aagacctcgc cacgcgtctc gcggcggacg aggcgctgac cggtgccctc gtcgtcggcc
      601 ggttcaagga tgggtctccg gtcacccttc gaccgtggga cggcctgggc ccggtaaaca
      661 acttcgagta cctcgcacat gaccgcgtcg ggaaccgttg tccattccac gctcacatcc
      721 ggaaggcgaa tcagcggggg gcgaacccat ttctggactc ggatcaggag cgcagccatc
      781 gaatcgtgcg ccgcggcatc ccgtacggag tccggcccgc accgtcgggc ggcgcctcca
      841 ccgcggcatc acctgcgggc gaactcggtc tcctgttcca agcgttccaa agcgacatcg
      901 cacggcagtt cgagttcatc cagcgcacgt gggtcgacaa tccgaacttc cccgagctcc
      961 tcctctttcc gggcctgaat acaggggacg acgcgctcat cggccagcat cctcgggccg
     1021 cgcaaaagtg gccccggaca tggggtcggt cgggacgggt cctcgatcga ctgcggttca
     1081 acttcggcga ctatgttcga ttgcggggcg gggagtactt cttcgcgccg agtctcagtt
     1141 tcctgaaaaa cttgtgacgg tttcggcgcc tgacccgctc gaacagttct aagggcaatt
     1201 gagtggacat gattcggctc gccgaccacc tactccggga tgagaccggc gaatgcttcc
     1261 gggatttccg catatcccat cttctccagg aactctcgac ggttcgggag aacgaaatct
     1321 cgatcgaggg tcgcgacggg ctgtccgtcg gatgtggatg cctccaaggc caccgttagg
     1381 ctgctcgggc ctgtgctttt cgcccgcccc gcgatgcgga tgcgtgtccc cgtcggcacc
     1441 caccggtgaa ggctcagcgc gctcgtccga acgggaatcc caatccggc
//
LOCUS       DATLMA010000581         1134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_300504, whole genome shotgun sequence.
ACCESSION   DATLMA010000581 DATLMA010000000
VERSION     DATLMA010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300504"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VNA10_07480"
     CDS             <1..799
                     /locus_tag="VNA10_07480"
                     /inference="COORDINATES: protein motif:HMM:NF012300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37560.1"
                     /translation="AVGKTSLIQRYVEARHTPEYKGTLGVHMHRVDVELPGDEPGDII
                     LGSIAIFDQMGEHAIRENFRDALFYGTQGALAVCDIQRPETLHTLAEWIRAVSAVTGG
                     VPFRIVFNKVDRAKGSKIGPQESAWLKENFPGAPTSLTSAATGEGVEEAFGGIIGQAV
                     DAMMAGEKNRKVRKLLRQRILVFAARREGNGITKSELFANMRDVKPDEVMEELDNLVR
                     LDLLVQYDAGPKTFLKSSTLPATFRYQITPLGRKVAASPAIEDLVVE"
     gene            complement(835..>1134)
                     /locus_tag="VNA10_07485"
     CDS             complement(835..>1134)
                     /locus_tag="VNA10_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013430193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HVG37561.1"
                     /translation="ILAAKAGAKYVSPFIGRLDDMGQEGMQVIREIVEIFDHYDWDCE
                     VLVASIRHPLHVIEAAKLGADIVTLPFDVLKKMTQHALTDVGLKRFLDDWAKVPK"
BASE COUNT          218 a          349 c          371 g          196 t
ORIGIN      
        1 agctgtcggc aagacgagcc tcatccagcg gtacgtcgag gcgcgccaca cccccgagta
       61 caaagggacg ttgggcgtcc atatgcaccg ggtcgacgtc gaacttcctg gggacgagcc
      121 aggcgacatc atcctggggt ctatcgcgat cttcgaccag atgggggagc acgcgatccg
      181 agagaacttc cgggatgcgc tcttctacgg tacccaaggc gccttggccg tgtgcgacat
      241 ccagcgcccg gagacgttgc ataccctcgc ggagtggatc cgcgccgtgt cggctgtcac
      301 cggtggcgtg ccgttccgca tcgtcttcaa caaggtcgac cgcgcgaaag gctccaaaat
      361 cgggccacag gaatccgcct ggctcaagga gaacttcccg ggggcgccga cgtccctgac
      421 gagcgcggcc accggagagg gggtcgaaga agcgttcggc gggatcatcg gccaggccgt
      481 ggacgcgatg atggcggggg agaagaatcg gaaagtgcgg aagctgcttc gtcagcgaat
      541 cttggtcttc gcggcgcgcc gcgaaggcaa cgggatcacg aagagcgaac tgttcgcgaa
      601 catgcgggac gtcaagccgg acgaggtcat ggaagagctc gacaacctcg tgcgcctcga
      661 cctgctcgtg cagtacgacg cgggtccgaa gacgttcctg aagtcgagca ctttgccggc
      721 gacgttccga taccagatca cgccgctcgg tcgcaaagtc gcggccagcc cggccatcga
      781 ggacctcgtc gtcgagtaga cgccgaagag tccacgcggg cgattcgcgg tcttctactt
      841 cgggaccttc gcccagtcgt ccaggaaccg tttcagcccg acgtcggtca gcgcgtgttg
      901 ggtcattttc ttcaatacgt cgaagggcag cgtgacgatg tcggccccga gcttcgccgc
      961 ttcgatcacg tgcaacggat gacggatgga ggcaacgagg acttcgcaat cccagtcgta
     1021 gtggtcgaag atctcgacga tctcccggat gacctgcatg ccctcttggc ccatatcgtc
     1081 gaggcggccg atgaacgggc tcacgtattt cgcgccggcc tttgccgcca ggat
//
LOCUS       DATLMA010000582         1025 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_300515, whole genome shotgun sequence.
ACCESSION   DATLMA010000582 DATLMA010000000
VERSION     DATLMA010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300515"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VNA10_07490"
     CDS             <1..382
                     /locus_tag="VNA10_07490"
                     /inference="COORDINATES: protein motif:HMM:NF012452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37562.1"
                     /translation="YDEPIDVGTLSRNLSEYLHEFTMYAVRPFGASVVIAGVDALGVQ
                     LIQVDPSGTTFKGSAFAIGQAADEALDTIVKGYRPDLSVEQAIALSSQAIEGVNGGKT
                     QIEHGVVTATSKRFQPQPNGSNAG"
     gene            complement(416..694)
                     /locus_tag="VNA10_07495"
     CDS             complement(416..694)
                     /locus_tag="VNA10_07495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37563.1"
                     /translation="MEDKMLTLHPQGKRGVKISKSKYDTMKKTILAILGKADLTHAQL
                     TAAVEKKLKGKFDGSIAWYMEGMKLDLEARGVIQRVPGEKHDVYRVKR"
     gene            805..>1025
                     /locus_tag="VNA10_07500"
     CDS             805..>1025
                     /locus_tag="VNA10_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014445194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37564.1"
                     /translation="MRIVSLLPAATEICFALGLGDDVVGVSPECDFPRAVREKPVVSH
                     GLLDYEGKTSLETSRMVGERIVSGGALYQV"
BASE COUNT          172 a          336 c          304 g          213 t
ORIGIN      
        1 gtacgacgag ccgatcgacg tcggcacgct ctcccgcaac ctctcggaat acctccatga
       61 gttcacgatg tacgcggtgc gtccgttcgg cgcatccgtc gtgatcgcgg gcgtcgacgc
      121 cctcggggtg caactcatcc aggtggatcc gagcgggacg acgttcaaag gttccgcgtt
      181 cgcgatcggt caggcggccg acgaggccct cgacacgatc gtgaaggggt atcgcccgga
      241 cctcagcgtc gagcaggcca tcgccctctc ctcccaggcg atcgagggcg tcaacggcgg
      301 caagacgcag atcgaacacg gggtcgtgac cgcgacctcg aagcgattcc aaccccagcc
      361 caacgggagc aacgccgggt agccacccgg ccctttcctc ttttgttctc gcgcttcagc
      421 gctttacgcg atacacatcg tgcttctcgc ccggcactcg ctgaatcacg ccgcgagctt
      481 cgaggtcgag cttcatccct tccatgtacc aagcgatcga gccgtcgaac ttccctttga
      541 gcttcttttc gaccgcggcg gtcagttggg cgtgggtcag atccgccttc cccaggatcg
      601 cgaggatcgt tttcttcatc gtgtcgtact tggatttgct gatcttgacc cctcgctttc
      661 cctgcgggtg gagcgttagc atcttgtctt ccatggcccg aggaggctcc cggagatatt
      721 taggcaagtc gccttgggac ttcggccgac cggacttgaa caacgttttt atcaacccgt
      781 ccgctaacgc tgctagcgaa tccgatgcga atcgtctcgc tgctccccgc agccacggag
      841 atctgcttcg ccctcggcct cggcgatgac gtcgtcggtg tctcccccga gtgcgacttc
      901 ccgcgcgccg tccgcgagaa acccgtcgtg agccacgggc tcctagacta cgagggaaag
      961 acgagtctcg aaacgagtcg gatggtcgga gagcggatcg tgtcgggcgg ggctttgtat
     1021 caggt
//
LOCUS       DATLMA010000583         2111 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_359235, whole genome shotgun sequence.
ACCESSION   DATLMA010000583 DATLMA010000000
VERSION     DATLMA010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359235"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VNA10_07505"
     CDS             <1..375
                     /locus_tag="VNA10_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37565.1"
                     /translation="ATFLCLNCKMSWRETVRDLPAKIRCPRCDAVMVAVIAPYEKDKI
                     AKLDLEATDKESRSKAKRLFTNASLVMAHGRKAVLALMARGVGEDTAARILRGYHETE
                     QDFLRDVLAAEVTYARTKRFWD"
     gene            524..1561
                     /locus_tag="VNA10_07510"
     CDS             524..1561
                     /locus_tag="VNA10_07510"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HVG37566.1"
                     /translation="MCDACGFALNKLSPEEKVDAILEDLLDLSKAPLTEAKTRPPRVP
                     DEAEVDESAAEELFDSLLVEIQPSSPAEPAEDQSASDTEQNRPSSFATAEAERIPVIA
                     TPAETESRKMIRISGRMFDGVTYASVGALLAVFIFFRMYLNPFDFSTPFPILLFAGVA
                     AGGMIAALVLFRISNSAVAQGDRLVKAGRYQEALAHYARAIRLLRRPSYAWTSRGVAM
                     RYLGRNDEALRCHENAIRLDPENEVAWCNLGTVYFKKGLLAKALDCYDRAIKIRPKYA
                     IAWNNKGVVYARMNRFADADKCHAKATKLRPEYVAAWLNRGEVLARLGDREEAQKCLE
                     RARSISRTATA"
     gene            complement(1558..>2111)
                     /locus_tag="VNA10_07515"
     CDS             complement(1558..>2111)
                     /locus_tag="VNA10_07515"
                     /inference="COORDINATES: protein motif:HMM:NF013856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HVG37567.1"
                     /translation="AAKKQSYRSRAAIKLSQIDLRYGLFESGNVVVDLGAAPGGWSQV
                     ARERIGAKGRVIAVDLAAISPIEGVEILRGDFTRPEIQAELFETLRKPADVVMSDTSP
                     KLSGNRSLDVARTLDLAEAALSLATRSLRPDGRFLVKVFQGAGYPPFVRRVGERFEAV
                     KGVKPTASTATSAEIYVLAMGRL"
BASE COUNT          379 a          683 c          703 g          346 t
ORIGIN      
        1 gcgacgttcc tctgcttgaa ctgcaagatg tcttggcggg agaccgtccg agacctcccc
       61 gcgaagatcc gatgccctcg gtgcgacgcc gtgatggtcg ccgtcatcgc cccgtacgag
      121 aaggacaaga tcgcgaagct cgacctcgag gcgaccgaca aagagagtcg ctcgaaggcc
      181 aagcgactgt tcacgaacgc gagcctcgtg atggcgcacg ggaggaaggc ggtcctcgcg
      241 ctcatggccc gcggcgtcgg cgaggacacg gccgcgcgga tcctgcgcgg ataccacgag
      301 accgagcaag acttcttgcg cgacgtcctc gcggcggagg tcacgtacgc gcggacgaaa
      361 cggttctggg actagcactc ccggtcgatg gtttcacggg agaaacccaa gacgatacgt
      421 ttatcgcaag gcggttcggt cctccgaatc ggttccaccg ttgagcgacc agacgaccgt
      481 ttcgtgttcg gtgtgcgggc atgtaaaccc gtcggatgcc accgtgtgtg acgcgtgcgg
      541 cttcgccctg aacaagctgt cgcccgaaga gaaggtcgac gcgatcctcg aggacttgct
      601 cgacctgtcg aaggcgccgc tcacggaggc gaaaacgagg cccccgcggg tgccggacga
      661 ggccgaggtc gacgagagcg cggcggagga gttgttcgac tccctcctcg tcgagatcca
      721 gccttcgtct cccgcggaac ctgccgagga ccaatccgct tcggacaccg agcagaatag
      781 gccatcctcg ttcgcgaccg cggaggcgga acggattccc gtgatcgcta cgcccgccga
      841 aacggaaagc cggaagatga tccggatctc cggccggatg ttcgacgggg tcacgtacgc
      901 atcggtcggc gcattgctcg cggtgttcat cttcttccgg atgtacctca acccgttcga
      961 cttctcgact ccctttccaa tcctgctctt cgccggggtg gccgcgggcg ggatgatcgc
     1021 cgcgctcgtg ctgttccgga tctcgaacag cgcggtggcc caaggcgatc gcctcgtgaa
     1081 agcgggacga taccaagagg ccctagcgca ctacgcgcgg gcgatccgtc tcctccggcg
     1141 accgtcgtat gcgtggacgt cccgtggcgt cgcgatgcgg tacctcgggc ggaacgacga
     1201 ggccttgcgg tgccatgaga acgcaatccg cctggacccg gagaacgagg tcgcgtggtg
     1261 caacctcggc acggtctatt tcaagaaagg gttgctcgcg aaggccctcg actgctacga
     1321 tcgggcgatc aagatccggc cgaagtacgc gatcgcgtgg aacaacaaag gcgtcgtgta
     1381 cgcccggatg aaccggttcg cggacgccga caagtgccac gcgaaggcga cgaaactccg
     1441 gcccgagtac gtcgccgcgt ggttgaatcg aggggaggtc ctcgcccgcc tcggagatcg
     1501 tgaggaagcc cagaagtgcc tcgagcgagc ccggtcgatt tcgcgcactg cgacggccta
     1561 gagacgcccc atcgcgagga cgtagatctc cgcgctggtt gcggtggacg cggtcggctt
     1621 cacgcctttc accgcctcga accgctcgcc gacccgtcgg acgaacggcg ggtatccggc
     1681 cccctggaac accttcacca ggaagcggcc atcgggccga agggagcggg ttgcaaggga
     1741 gagcgccgcc tccgcaagat cgagggtccg cgccacgtcg agcgatcggt tgccgctcag
     1801 tttcggggac gtgtcgctca tcacgacgtc ggccggcttc cggagcgtct cgaacagttc
     1861 ggcctggatc tcggggcgag tgaagtcgcc tcgaaggatc tcgacccctt cgatggggga
     1921 gatcgcggcg agatcgacgg cgatgacgcg tcccttcgcc ccgatgcgct cgcgggcgac
     1981 ttgggaccaa ccgccgggcg cggcaccgag gtccacgacg acgttgcccg attcgaacag
     2041 cccgtatcgc aggtcgatct gggacagctt gatcgccgca cggctccggt acgactgctt
     2101 cttcgccgct c
//
LOCUS       DATLMA010000584         2164 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_116280, whole genome shotgun sequence.
ACCESSION   DATLMA010000584 DATLMA010000000
VERSION     DATLMA010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116280"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..2144
                     /gene="lonB"
                     /locus_tag="VNA10_07520"
     CDS             162..2144
                     /gene="lonB"
                     /locus_tag="VNA10_07520"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013898079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease LonB"
                     /protein_id="HVG37568.1"
                     /translation="MVETVGEPEELPPVDSWINKVDFRSTAEVKIPERLVDQVIGQER
                     AVEVIRKASEQKRHVMLIGDPGTGKSMLARSMTEMLPRDDLQDIIVYHNPEDPNEPKI
                     RVVPAGKGREIVNAQKAEAMQRREQKASMVMTIVFFIIGLSVILSYQWGSATPQFRPD
                     APNIILFGILVAAIIYIATRYTGHRQENLMVPKLLVSHTPDEMPPFIDATGSHAGALL
                     GDVKHDPFQSGGLETPAHERVESGAIHKAHKGVLFVDEINVLRMESQQSLLTAMQEKK
                     FSIVGQSERSSGAMVKTEAVPCDFILVAAGNLDAVQGMHPALRSRIRGYGYEIYMKST
                     MPDSEENRLKLVRFVAQEVAKDRKIPHFDRTAVLEILREAQRRAGRRGQLTLRLRELG
                     GLIRVAGDIAQEESTPLVTAKHVLNAKRIARSLEQQVADRMIERGKEYQTFITEGAIV
                     GMVNGLAVLVGDNSIAEFSGIVLPIAAEVTPAQAKQGGRIIATGRLGEIAKEAVENVS
                     ALIKKYTGEDISNHDIHVQFVGSREGTEGDSASISVATAVISALEEVPVNQTVAMTGS
                     LSVRGQVLPVGGVTAKIEAAAELGIKKVVIPRANLKDVLLEDRYQGKIEIVPVDTLSE
                     VLEQALVGPKKSGLISKLVALVPKITPEKPGAALPH"
BASE COUNT          457 a          648 c          709 g          350 t
ORIGIN      
        1 ttcgagtgca tcgcatcgcg acgaattttt cggcgaagat cgatgattca catatggagg
       61 aagtcgaagc cgcgcaatct cattcggatt ttcgaggtca aagtgtttaa gtagaaggct
      121 cgtgtattcg aacgtgaccc aagcgagggc ccggtcagaa gatggtggag acggtgggag
      181 agcctgaaga actcccccct gtggattcgt ggattaacaa ggtcgatttc cggtccacgg
      241 cggaggtcaa gatccccgag cggctcgtcg accaagtcat cggtcaggag cgagccgtcg
      301 aggtgatccg gaaggcgtcc gagcagaagc gacatgtgat gctcatcggc gatccgggca
      361 cgggcaagtc gatgctggcc cgctcgatga cggaaatgct gccgcgcgac gacctccaag
      421 acatcatcgt ctaccacaat cccgaagatc cgaacgagcc caagatccgc gtcgtgcccg
      481 ccgggaaagg acgcgagatc gtcaacgcgc agaaagcgga ggcgatgcaa cggcgggaac
      541 agaaggcctc catggtcatg acgatcgtct tcttcatcat cgggctgagc gtcatcctct
      601 cgtatcagtg gggatccgcg acgccgcagt tccggcccga cgcgccgaac atcatcctgt
      661 tcgggatcct cgtggcggcg atcatctaca tcgcgacacg gtacaccggg caccgccaag
      721 agaacctgat ggtccccaag ctcctcgtga gccacacgcc cgacgagatg ccgccgttca
      781 tcgatgcgac gggcagccac gcgggcgcgc tcctcgggga cgtgaagcac gacccgttcc
      841 agagtggcgg gctcgagacg ccggcgcatg agcgcgttga atccggcgcg attcacaagg
      901 cccacaaagg cgtcctgttc gtcgacgaga tcaacgtgct ccgcatggag agccagcaga
      961 gcctcttgac cgcgatgcag gagaagaagt tctcgatcgt cggtcagagc gagcggtcat
     1021 cgggagcgat ggtgaagacg gaggccgtcc catgcgattt catccttgtc gccgcgggca
     1081 accttgacgc ggtccagggg atgcacccgg cattgcgctc gcggatccgc gggtacggct
     1141 atgagattta catgaagagc acgatgccgg attcggaaga gaaccgactc aagctcgtgc
     1201 ggttcgtggc ccaagaggtc gcgaaagacc gcaagattcc gcacttcgac cggaccgcgg
     1261 tgctcgagat cctccgggaa gcgcagcgga gagcaggccg ccgaggtcag ttgaccctgc
     1321 ggctccgcga actcggcgga ctcatccgcg tcgccggcga catcgcccag gaagagtcga
     1381 cgcccctcgt caccgccaag catgtcctga acgcgaagcg gatcgcgcgc tcccttgaac
     1441 agcaggtcgc ggaccgcatg atcgagcgcg ggaaggagta tcagacgttc atcacggaag
     1501 gcgcaatcgt cggcatggtc aacggccttg ccgtcctagt cggcgacaac tcgattgcgg
     1561 agttcagcgg aatcgtcctg ccgatcgccg ccgaagtgac gccggctcag gcgaagcagg
     1621 gcgggcgcat catcgcgacg ggtcgcctgg gtgaaatcgc gaaagaggcg gttgagaacg
     1681 tctcggcctt gatcaagaag tacacgggcg aggacatctc caatcacgac atccatgtcc
     1741 agttcgtcgg ctcccgcgaa gggactgagg gcgacagtgc atccatctcg gtcgcgacgg
     1801 ccgtcatcag cgccctcgag gaggtgccgg tcaaccaaac cgtcgcgatg acgggctcgt
     1861 tgagcgtccg cggacaggtc ctcccggttg gcggtgtgac ggcgaagatc gaggccgcgg
     1921 cggaactggg gatcaagaag gtcgtcattc cccgcgcgaa cttgaaagac gtcctgttgg
     1981 aggaccgcta ccaggggaag atcgagatcg tccccgtgga cactctgagc gaggtcctcg
     2041 agcaggcgct cgtcggtccc aagaaatccg ggctcatcag caagctcgtg gcgttggtcc
     2101 cgaagatcac gccggagaag ccgggcgcgg ccttgccgca ctgagatccc ggagagaccg
     2161 gagg
//
LOCUS       DATLMA010000585         1091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_539881, whole genome shotgun sequence.
ACCESSION   DATLMA010000585 DATLMA010000000
VERSION     DATLMA010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539881"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..>1091
                     /locus_tag="VNA10_07525"
     CDS             151..>1091
                     /locus_tag="VNA10_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012238261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37569.1"
                     /translation="MIVNRLRSIGFLLPFCLMLLTGCGKDEPGRVLDEASRAGRTVAS
                     FPAADEDYFHDMDDGLALTREEIQGRNTWIVWTGGNDRFWNRISIDSFGAFDLLKIIS
                     SHEKLEASRDNRWNFLGLVNEPCFEKPKGPDPDRYGLWLDRRRSDCPPDPFENDKKYP
                     GVAIGARGKNKLPVGSSYGWATGIVGLRLFPNPDFDAAAAKKWDAAKYYADESYYLRK
                     ELVRPYRVGMSCGFCHVGPNPIKPPDDPENPKWENLSSNVGAQYFWVDRIFTWHGAKS
                     ENVKSNYMFQLLHASRPGSLDTSLVSTDYINNPRTMNA"
BASE COUNT          212 a          352 c          344 g          183 t
ORIGIN      
        1 gccctcatcg agttcctcaa gacgctctag ccgtctgtca cgtcccgtag cgagatggag
       61 ccggattttc tcgtttgaca tgagcgagag cactgagaga ggatgcggcg aagattgagg
      121 acggaccccg gcagcgagga ggagacttcc atgatcgtca accgcctgcg cagcatcggg
      181 ttcctcctgc cgttctgcct catgctcctc accggttgcg gcaaggacga gccgggccgc
      241 gtcctggacg aggcgagccg cgcgggccgg accgtcgcgt cgtttccggc ggcggacgag
      301 gattacttcc acgatatgga tgacggcctc gcgctgacac gcgaggagat ccaggggcgc
      361 aacacctgga tcgtgtggac gggaggaaac gaccgcttct ggaacaggat ctcgatcgac
      421 agcttcggcg ccttcgatct gctcaagatc atttcctcgc acgagaagct ggaggcgagc
      481 cgggacaacc gttggaactt cctcggtctc gtcaacgagc cgtgcttcga gaagccgaaa
      541 gggcccgatc ccgaccggta cgggctctgg ctcgacaggc ggcggtccga ctgtcctccc
      601 gaccccttcg agaacgacaa gaagtacccg ggcgtcgcca tcggcgcgag gggcaagaac
      661 aagctgcccg tcggctcctc ctacggatgg gcgaccggca tcgtcggcct gcggctcttt
      721 ccgaatcccg atttcgatgc ggcggcggcc aagaagtggg atgcggcgaa gtactacgcc
      781 gacgagagct actacctcag gaaggagctc gtgcggccgt accgggtcgg catgtcgtgc
      841 gggttctgcc acgtcgggcc gaacccgatc aagccgcccg acgatccgga gaatccgaag
      901 tgggaaaacc tcagctcgaa cgtcggcgcc cagtacttct gggtcgaccg catcttcacc
      961 tggcatggcg ccaagtccga gaacgtgaag tccaactaca tgttccagct gctccacgcc
     1021 tcccggccgg gcagcctcga cacgtcgctc gtgtccaccg actacatcaa caatccgcgc
     1081 acgatgaacg c
//
LOCUS       DATLMA010000586         1624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_116297, whole genome shotgun sequence.
ACCESSION   DATLMA010000586 DATLMA010000000
VERSION     DATLMA010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116297"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..>1624
                     /locus_tag="VNA10_07530"
     CDS             32..>1624
                     /locus_tag="VNA10_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014397259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37570.1"
                     /translation="MNRSCIGRAGVALALSVSLSAPGMAAQVKKPDLTVSRTALEKEL
                     LAKYGEGQRDRLARGLKQVAQFWRAEDGDSKAFEEFARANFAGDAATLDALFTRMEFA
                     MESLDGHMVEINRDFRMQSDLDRGPIYPFDETLAGYDPSAHVNDDFFANKLAFVVLLN
                     FPLTTLEQRLAEGEGWSRRQWAEARLAQRFSKRIPAEVNLAIAKAASESAQYIAQYNV
                     WMHHLVDERGNRLFPPKMRLLSHWNLRDEIKADYGDASNGLAKQRAIQKVMERIVTQT
                     IPKAVIDNPNVDWNPFTNEVRPAAEKDFDAPPPATSAVAATKPTNAPEPDTRYATLLA
                     DFQASRKADPYSPTAPTLIARRFDENRELPEARVRKMFEDVLTSPLVPRVAKLIEKRL
                     GRPLEPFDVWYSGFKQRGKYSEAELDEIVRKKYPTPEAYKKDIPNILQKLGFSKEKAE
                     SVADNIVVHPARGSGHAFGAGKRGFKAYLRTRVEKEGMNYKAYNIAVHEMGHNVEQTF
                     SLNAIDHTLLAGVPNTAFTEALA"
BASE COUNT          313 a          544 c          521 g          246 t
ORIGIN      
        1 cctcgattaa actccgcgcg ccggagggct catgaacaga tcctgcatcg ggcgagcggg
       61 agttgcgctt gcgctttctg tcagtctttc cgctccgggg atggcggccc aggtgaagaa
      121 gcccgatctg accgtttcga ggaccgcgct cgaaaaggaa ctcctcgcga agtacggcga
      181 ggggcagagg gaccggctcg cgcgtgggtt gaagcaggtc gctcaattct ggagagccga
      241 ggacggcgac tcgaaggcgt tcgaggagtt cgcccgggcg aacttcgccg gcgacgcggc
      301 gacgctcgac gcgctcttta cgcggatgga gttcgcgatg gagtcgctcg acggccacat
      361 ggtcgagatc aaccgcgact tccggatgca gtcggacctc gatcggggac cgatctatcc
      421 gttcgacgag accctcgccg gctacgaccc ctccgcgcac gtcaacgacg acttcttcgc
      481 caacaagctc gccttcgtcg tcctgctgaa cttccctctg acgacgctcg agcagcgcct
      541 cgcggagggc gaaggctggt cacgccggca gtgggcggag gcccggctcg cgcagcgctt
      601 ctccaagcgc attcccgccg aagtcaatct ggcgatcgcg aaggccgctt cggagtcggc
      661 gcagtacatc gcccagtaca acgtctggat gcaccacctc gtcgacgagc ggggaaaccg
      721 cctcttcccg ccgaagatgc gcctgctctc gcactggaac ctgcgcgacg agatcaaggc
      781 ggattacggc gatgcgtcga acggcctcgc gaaacagcga gcgatccaga aggtgatgga
      841 gcggatcgtc acgcagacca ttccgaaagc cgtcatcgac aacccgaacg tggactggaa
      901 ccccttcacg aacgaggtcc gtccagcggc ggagaaggac ttcgacgcgc cgcctcccgc
      961 gacctccgcc gtcgcggcga cgaagccgac caacgccccg gagcccgaca cccgttacgc
     1021 gacgctgctc gcggacttcc aggcgtcgcg caaggccgac ccgtactcgc cgaccgcgcc
     1081 gaccctgatc gctcgccggt tcgacgagaa ccgcgagctt cccgaggcgc gggtccgcaa
     1141 gatgttcgag gacgtcctga cttccccgct cgtcccgagg gtcgcgaagc tgatcgagaa
     1201 gcgcctcggc cggccgctcg aaccattcga cgtctggtac tccggcttca aacagcgggg
     1261 caagtacagc gaggccgagc tcgacgagat cgtgcgcaag aagtacccga cgccggaggc
     1321 ctacaagaag gacatcccga acatcctcca gaagctcggc ttctcgaagg agaaggcgga
     1381 gtccgtcgcc gacaacatcg tcgtgcatcc cgctcgcggc tccggccacg cgttcggcgc
     1441 cggcaagcgc gggttcaagg cgtatctgcg gacgcgggtc gagaaggagg ggatgaacta
     1501 caaggcttac aacatcgcgg tgcacgagat ggggcacaac gtcgagcaga ctttctcttt
     1561 gaacgcgatc gatcacacgc tgctcgcggg ggtgcccaac acggcgttca ccgaggcgct
     1621 cgcc
//
LOCUS       DATLMA010000587         1344 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_540057, whole genome shotgun sequence.
ACCESSION   DATLMA010000587 DATLMA010000000
VERSION     DATLMA010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540057"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..869
                     /locus_tag="VNA10_07535"
     CDS             111..869
                     /locus_tag="VNA10_07535"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HVG37571.1"
                     /translation="MPSRPTPKRRTVSSFDLYAQAMLDHWLGKKVVFEFERDDGYRSR
                     SLVEAYFTPPAKWSKIEREAMRAVRGRVLDVGCGPGRHAVYLQRKGHRVVGIDASPTQ
                     VALARVRGLQEVYQGSVQRLPRGLGTFDTLILMGNNLGLAGDLPRMRRFLRDAREITK
                     SHGRIIGSTRIPGTWIPYHLSYVKRNIARGRPPGLLSLRGHYKGRVGDWFDLLLLSPD
                     DLAELAHSTGWDLVRVIYEPRDDPTSYVGVLQRR"
     gene            933..>1344
                     /locus_tag="VNA10_07540"
     CDS             933..>1344
                     /locus_tag="VNA10_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37572.1"
                     /translation="MPFLDQFRIEALPKKWADEGKLWQETYFPEMPEVFDAPNWSRYY
                     PETPMPRLSVIMAKPDGFAGFAQKVVGATAATGNLTNRLWTADKMPDAQFMTALKIIR
                     AQASTELGSIQQHRMVYEQLDSGSLTGLDKEIVEG"
BASE COUNT          263 a          440 c          421 g          220 t
ORIGIN      
        1 cccgtccgcc taggcgtccg cgaaggataa gctttgccca gcgcgattat gttgtagcta
       61 ctcggcgatg agcaaatctc aagacgagcc gaacgcatgc cgcttcaacc atgccgtctc
      121 gcccgacgcc gaagcgacga accgtctcgt cgttcgatct gtacgcgcaa gcgatgctgg
      181 accactggct cggcaagaaa gtcgtgttcg aattcgaacg ggacgacggg tatcgaagcc
      241 gctcactcgt cgaggcgtat ttcacgcctc ccgcgaagtg gtcgaagatc gagcgcgagg
      301 cgatgcgagc ggtccggggt cgcgtgctcg atgtcggatg cggcccgggt cgacacgccg
      361 tctacctcca gcgcaaggga caccgcgtcg tcggaatcga cgcgtcgccg acgcaggtcg
      421 cgctggcccg agtccggggc cttcaggagg tctaccaagg cagtgtccag cgcctgccgc
      481 gcggcctcgg gaccttcgac acgctgatcc tgatgggtaa caacctcggg ctcgctggag
      541 acctcccgcg gatgcgccga ttcttgcgcg acgctcgaga gattacgaag agccacggcc
      601 ggatcatcgg cagcacccgg atcccaggta cgtggatccc gtaccacctg agctacgtga
      661 aacgaaacat cgcccgcggt cggccgccgg gattgctctc gctgcgcggg cattacaaag
      721 gccgcgtcgg ggattggttc gacctcttgc tgctctcgcc cgacgacctc gcggagctcg
      781 cacactcgac cggctgggac ctggtccggg tcatctacga accccgagat gatccgacga
      841 gttacgtcgg cgtcctccaa cgtcgctgag gaacggacgc gcccgcgtgc gagaaaggtt
      901 catccctcac tacgtgcatc gaaccgaaca ccatgccctt cctcgaccag ttccgcatcg
      961 aggccctgcc aaagaagtgg gcggatgaag ggaagctctg gcaagagacg tacttcccgg
     1021 agatgcccga ggtcttcgac gcgccgaatt ggtcgcgata ctatccggag acgccgatgc
     1081 cccgcctcag cgtcatcatg gcgaagcccg acggcttcgc aggcttcgca cagaaggtcg
     1141 tcggtgcgac cgccgcgacc ggcaacttga ccaaccgtct atggaccgcg gacaagatgc
     1201 ccgatgcgca gttcatgacg gcgctgaaga tcatccgcgc gcaggcctcg acggaactcg
     1261 ggtcgatcca gcagcaccgg atggtgtacg agcagctcga cagcggatcg ctcaccggac
     1321 tcgacaagga aatcgtcgag ggga
//
LOCUS       DATLMA010000588         1430 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_116586, whole genome shotgun sequence.
ACCESSION   DATLMA010000588 DATLMA010000000
VERSION     DATLMA010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116586"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1430)
                     /locus_tag="VNA10_07545"
     CDS             complement(<1..>1430)
                     /locus_tag="VNA10_07545"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37573.1"
                     /translation="RVTTNAFADYQPFTFAFPGMDHSFPSGGRIRLTVRNMPSGASDL
                     ILAMNSTFASSRLDLGTTTYVRIDLLDMRDAAGSTTVWSPKSTIVILANVSDPFGSSE
                     ISGARINLTSPSGSLVVNSTAMGLLSTDPSTPSSWKVFQFSYAPPLVEGIYRATITTM
                     EANGVTDLAESTALVRAPHFTMEKTATATNVGSGDRYNYDIWFNNSGPGTAGRVWIND
                     SLPTQLTFQSSSDPAAMTGSYNWTWSALGPGNYRLSIGVQVKSSLPPIPYFRNFAFLN
                     FTDEKGFTWPFQSAFADVAFRGPVISLSKTSATSAIHTNETVAYVITLQNTGDAARDL
                     WINDTLPQGMTYAGDTHDPIWGSVAVSGNEIYFRFANMPSLSTWSFSVSAQAAPALVR
                     GSTLVNVVGLNYTNSNRFLMPPRASSWSILVIAPHIASASIAMSRTRVTPADVVSGSM
                     TFANIGNEAARTAWINLTLDPKLYFL"
BASE COUNT          269 a          429 c          469 g          263 t
ORIGIN      
        1 caggaagtac agtttcggat ccaacgtcag gttgatccac gccgttcgag cggcttcgtt
       61 tccgatgttc gcaaacgtca tggatcccga gacaacatcc gcgggcgtga cccgggtccg
      121 ggacatcgcg atcgaagccg aggcaatgtg cggagcgatc accaggatcg accaggacga
      181 ggctcgcggc ggcatgagga atcgattcga gttcgtgtag ttgaggccga cgacgttcac
      241 cagcgtcgat ccacggacca gcgccggggc ggcctgggcg gacaccgaga aggaccaggt
      301 cgacaggctc ggcatgttcg cgaaccggaa gtagatctcg ttcccggaga ccgccacgct
      361 tccccaaatc gggtcatgcg tgtcccccgc gtaggtcatt ccctggggca atgtgtcatt
      421 gatccacagg tcgcgggccg cgtcccccgt gttctgcagg gtgatcacat acgcgaccgt
      481 ctcgtttgtg tggatcgcgc tcgtcgcact cgtcttggac aggctgatca caggtccccg
      541 gaacgcgacg tcggcgaagg ccgattggaa cggccaggtg aagcctttct cgtccgtgaa
      601 gttcaggaat gcgaagttcc ggaagtatgg gatcggaggc aggctgctct tcacctgcac
      661 gccgatgctg aggcgataat tcccgggccc gagcgccgac caggtccagt tgtaggaacc
      721 cgtcatggcc gccgggtccg acgaactctg gaacgtcaac tgggtcggga ggctgtcgtt
      781 gatccacacg cggcccgcgg ttccgggccc gctgttgttg aaccaaatgt catagttgta
      841 tcggtcgccg ctcccgacat tcgtggccgt cgcggtcttc tccatcgtga agtgcggagc
      901 tcgaacgagg gccgtcgatt ccgcgaggtc cgtgaccccg ttcgcttcca tcgtggtgat
      961 cgtcgcacga taaatcccct cgacgagggg cggggcgtac gagaactgga acaccttcca
     1021 tgacgagggc gtcgacgggt cggtcgacag gagccccatc gcggtgctat tcacgacgag
     1081 cgacccggac ggtgaggtca gattgattcg ggcgcccgaa atctcggagc tgccgaacgg
     1141 atccgagacg ttcgcgagga tcacgatcgt gcttttcgga gaccagaccg tcgtcgaacc
     1201 ggccgcgtcc ctcatgtcga ggagatcgat ccggacatag gtcgtcgtgc ccagatccag
     1261 gcgggacgag gcgaacgtgg aattcatcgc gaggatgagg tccgaagctc cgctcggcat
     1321 gttccggacc gtcagccgga tccgtccgcc tgacgggaac gagtgatcca tccccggaaa
     1381 cgcgaacgtg aacggctggt agtccgcgaa ggcgttcgtg gtcactcgac
//
LOCUS       DATLMA010000589         1886 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_359977, whole genome shotgun sequence.
ACCESSION   DATLMA010000589 DATLMA010000000
VERSION     DATLMA010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359977"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VNA10_07550"
     CDS             <1..292
                     /locus_tag="VNA10_07550"
                     /inference="COORDINATES: protein motif:HMM:NF014037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HVG37574.1"
                     /translation="VPGAVQVRSDELEVQIREVAGVLGLGLVNPMSRCSLCNEVLVPV
                     PPQEVKGLVPEGVRSRYQEFWRCPSCKRMYWQGSHWNKMVERLNQLDLPPAP"
     gene            371..1453
                     /gene="carA"
                     /locus_tag="VNA10_07555"
     CDS             371..1453
                     /gene="carA"
                     /locus_tag="VNA10_07555"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012940062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HVG37575.1"
                     /translation="MDGSLILEDGTAVRGAFFGARKRVFGELVFNTNMTGYTEALTDP
                     SYRGQILMMTYPLIGNYGVDPETMESERIQPTGFVVREACSAPSHPRSSLGLSEFLKT
                     YETPAIERADTRALTIKIRSKGTMKAALVRADEDVEAVAREVRKSPHPDTRNLVGEVS
                     CRRVERYPGSGKRTLVVVDCGVKRNIIREAQRYADVIRVPYDATSDEILTHKPDGVIL
                     SNGPGDPAHPEVRATAVRTAKDLVGRTPLLGICLGHQLLALAFGGKTYKLKFGHRGGN
                     QPVKDLRSGRVHITSQNHGFAVDADSLPSSEFEVTHLNLNDGTVEGMAHRELPIFSVQ
                     YHPEARPGPWDNEYIFRDFVAELKGA"
     gene            1477..>1886
                     /locus_tag="VNA10_07560"
     CDS             1477..>1886
                     /locus_tag="VNA10_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011843834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HVG37576.1"
                     /translation="MPKRGDVRTAMVVGSGPIVIGQAAEFDYSGTQACRSLREEGVRV
                     VLVNSNPATIQTDPETADAVYVEPLTIEFLEKVIAKERPQGILSGMGGQTALNLCSEL
                     AEAGVLQRHGVELLGTKLDAITAGENRERFASLMR"
BASE COUNT          359 a          570 c          628 g          329 t
ORIGIN      
        1 cgtccccggt gcggtccaag tccggagcga tgagctcgag gtgcagatcc gcgaggtcgc
       61 gggcgtcctc gggctggggc tcgtgaatcc gatgtcgcgg tgctctctgt gcaacgaggt
      121 cctcgtgccg gttccgcctc aagaggtgaa aggtctggta ccggagggtg tccgctcccg
      181 ctaccaagag ttctggcgat gcccttcctg caagcgcatg tattggcagg gtagccattg
      241 gaacaagatg gtcgagcggc tgaaccagct tgacctccca ccagcgccat agcctccgtg
      301 cgtttgcgga tcctcccgcg tgagggaaat cctgatatgg cgaatcgaaa atggggtgag
      361 ggtctagcgg atggatggct cccttatcct cgaggacgga acggccgtcc ggggagcgtt
      421 tttcggggcg cgcaagaggg ttttcggcga gctcgtgttc aacacgaaca tgacgggcta
      481 cacggaagcc ctcaccgatc cgtcgtatcg cggccagatt ttgatgatga cgtatccgct
      541 catcggcaac tacggcgtcg atccggagac gatggagtcc gagaggattc agccgaccgg
      601 attcgtcgtc cgagaggcgt gctccgctcc gagccatccg cggagttcgc tcggcctttc
      661 cgaattcctg aagacctatg agactccggc catcgagcgg gcagacaccc gagctctcac
      721 aatcaagatt cgttcgaaag ggacgatgaa ggccgccctc gtccgcgccg acgaggatgt
      781 cgaggcggtc gcccgcgagg tccgcaagtc tccgcacccc gacacgagga acctcgtcgg
      841 cgaggtgagt tgtcggcgcg ttgaacggta tcccggttcc ggcaagcgga ccctcgtcgt
      901 ggtcgattgc ggcgtgaagc ggaacatcat ccgcgaggct cagcgatatg cggacgtgat
      961 tcgcgtaccc tacgacgcga cctcggatga aatcctgacg cataagccgg atggcgtgat
     1021 cctgtccaac ggtccagggg atccggccca tcccgaggtc cgcgcgaccg ccgtgaggac
     1081 cgcgaaagac ctcgtgggcc ggacacctct tcttggaatc tgcctcggcc atcagctgct
     1141 cgccctcgcc tttggcggga agacgtacaa actgaagttc gggcaccggg gaggcaatca
     1201 gccggtcaag gatcttcgga gcggacgcgt ccacatcacg tcgcagaacc atggattcgc
     1261 ggtcgacgcc gactcgttgc cgagttccga gttcgaagtg acgcacttga atctcaacga
     1321 cgggacggtc gaaggcatgg cccaccggga gctcccgatc ttctccgtgc agtaccatcc
     1381 ggaggcgcga cccgggccgt gggacaacga gtacatcttc cgagacttcg tcgcggagct
     1441 caagggggcg tagcacgggc ggagggggtg gggccgatgc ccaagcgcgg ggacgttagg
     1501 accgcgatgg tcgttggttc cggaccgatc gtcatcggcc aggccgccga attcgactac
     1561 tccgggacgc aagcctgtcg gtccctccgc gaagaaggcg tgcgggtcgt cttggtgaac
     1621 agcaacccgg cgacgatcca gacggacccg gaaaccgcgg acgcggtgta tgtggaaccc
     1681 cttacgatcg aattcctcga gaaggtgatc gcgaaggaac gtccgcaagg gatcctgagc
     1741 gggatgggcg gtcaaaccgc cctgaacctg tgcagcgaac tcgccgaggc gggcgtcctt
     1801 caacggcacg gggtcgagct gctcgggacg aaactcgatg cgatcacggc gggcgagaat
     1861 cgcgagcgat tcgcctcact catgcg
//
LOCUS       DATLMA010000590         1593 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_899546, whole genome shotgun sequence.
ACCESSION   DATLMA010000590 DATLMA010000000
VERSION     DATLMA010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899546"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..>1593)
                     /locus_tag="VNA10_07565"
     CDS             complement(222..>1593)
                     /locus_tag="VNA10_07565"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HVG37577.1"
                     /translation="YLPFGDEPAGVAARTEARIPNSAPEEPKLGPAPAKRSSASPGQK
                     AGRAAPAQPQVSDDRENIQPGDRVVLIVEDDAKFAATLLDVARESGFKGVVALDGSTA
                     LVLVKELSPDAITLDLKLPDMDGWAVLDFLKHDPGTRHIPVSVISVTERMHKCLHMGA
                     LGTVQKPAVKEALQEALAKTRRIIEHEIRTLLVVDGNDAERTSITEALRGEDVQITGA
                     RAGKQALDALRKNQFDCMVLGPTLRDMTAIELIKKIVQSETASELPIVIYQTDALSGS
                     ERDKLKKLAEVAVLKSARTLEAVLEETTLFLHQTVNELPTDKRDPLLLAIQRATPDLA
                     GRKVLIVDDDIRNIFALTGALEQHGITVLNAENGKDGLEALKNNPGIDVVLMDIMMPE
                     LDGYDTIRIIRRLDEFKNLPIIAVTAKAMKGDREKCIDAGASDYISKPVNIEQLLSLL
                     RVGLAK"
BASE COUNT          245 a          507 c          475 g          366 t
ORIGIN      
        1 gtggcggttt cgaaaccgtc catttcgggc atccggatgt cgagcagaat gagcgcgaag
       61 tcggttttga gaatctgtct cagcgcctcc tttcccgacc cgaccgccag cacgttccgg
      121 tcgggcccgg agaggagctc ccgcatcgca accagggtat gccgctcgtc atcgaccaca
      181 agaatgttag cttgcgatga gccggacacc gccgtctccg atcacttggc gagcccgacc
      241 cgcaacagcg acaacagctg ttcgatattg acgggcttgg agatgtagtc cgaggcgccg
      301 gcgtcgatgc atttctcgcg gtcccccttc atcgctttgg cggtcactgc gatgatcgga
      361 agattcttga attcgtccag cctgcgaatg atccggatcg tgtcgtatcc gtcgagctcg
      421 ggcatcatga tgtccatgag gaccacgtcg atgccgggat tgttcttcag cgcctcgagc
      481 ccgtctttgc cgttctccgc gttgagcacc gttatcccgt gctgctcgag agccccggtc
      541 aacgcgaata tgtttcttat gtcgtcgtcg acgatcagca cttttctacc ggccagatcc
      601 ggcgtggccc tttggatggc gagaagcagc gggtcgcgct tgtccgtcgg cagttcgttg
      661 accgtctgat gcaggaacag cgtcgtctcc tccaaaacgg cttcgagggt tcgcgcgctt
      721 ttcaggacgg cgacttccgc cagtttcttg agcttgtccc gctcgctgcc gctcagggcg
      781 tccgtttgat agatcacgat cggtaattcg gaggccgttt cggattgaac gatctttttg
      841 atgagttcta tcgccgtcat atcgcgaagc gtcggtccga gcaccatgca atcgaactga
      901 tttttccgca gggcatcgag ggcctgcttg ccggcgcgtg cgcccgtgat ctgcacgtcc
      961 tccccgcgca gggcttcggt gatgctcgtc cgctccgcat cgtttccatc gacgacgagc
     1021 agcgttctga tctcgtgttc gattatcctg cgcgtcttgg cgagggcttc ctggagcgct
     1081 tcttttaccg cgggcttttg caccgtcccc agggctccca tgtgaaggca tttgtgcatc
     1141 cgttcggtca cggagatgac gctcaccgga atatgccgcg ttcccggatc gtgtttcagg
     1201 aaatccagca ccgcccatcc gtccatgtcc ggaagcttca gatccagcgt gatcgcgtcg
     1261 ggagagagct ccttgaccag gacgagcgcc gtgcttccat ccagggcgac cactcctttg
     1321 aacccgcttt cgcgcgcgac atcgagcagc gtcgcggcga acttcgcgtc gtcttcgacg
     1381 atcaggacga cgcggtcgcc gggctggatg ttctcgcggt cgtcgctcac ctgcggctgc
     1441 gcgggcgccg cacgccccgc tttctgcccc gggctcgcgc tcgatcgctt ggcgggagcc
     1501 gggccgagct tgggctcttc gggggcacta ttcggaattc tcgcctcggt tctcgccgcg
     1561 acccccgctg gctcgtcgcc gaacggcagg taa
//
LOCUS       DATLMA010000591         3855 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_117270, whole genome shotgun sequence.
ACCESSION   DATLMA010000591 DATLMA010000000
VERSION     DATLMA010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117270"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VNA10_07570"
     CDS             <1..415
                     /locus_tag="VNA10_07570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG37578.1"
                     /translation="MALGLACFGGLAILLALATGAGSPDLRQLVSRWPLIVVFAAGAG
                     TFPPAALAYLGDIVEHAVTGTTFGIYSIIFGSGLIVGPILGGALTQALGPIAFAVIAL
                     GLIGISGAGVLFIREPLKTPRTAVAPESPTPPEMR"
     gene            486..995
                     /locus_tag="VNA10_07575"
     CDS             486..995
                     /locus_tag="VNA10_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37579.1"
                     /translation="MASSTSSLLDLDPIAYFAMGGFALFFGLFFFVLLYDIPLFLYVC
                     GPITVIPGVIAIAVGVRQWRRERAVVEFANWLTSQRRIPMDVMAQRLGKTRFETEKLL
                     GKALGEGLVKGAIDRTTDEFVSQDAVKQEHFVGTCPNCGGNVDTWYFPEERVTCPYCE
                     RALALPADA"
     gene            1061..1489
                     /locus_tag="VNA10_07580"
     CDS             1061..1489
                     /locus_tag="VNA10_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010916419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HVG37580.1"
                     /translation="MARGLFAARKLKGERQTRRWSDRYYKRRVLHLKEKSDPLEGSPQ
                     AKGIVLEKVAIEAKQPNSALRKCVKVQLIKNGRQVTAFAVGDGAINFIDEHDEVLVEG
                     IGGRMGRSYGDIPGVRYKVIQVNGVSLDELVRGRKEKPVR"
     gene            1494..2240
                     /locus_tag="VNA10_07585"
     CDS             1494..2240
                     /locus_tag="VNA10_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020449313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HVG37581.1"
                     /translation="MEPETPPPPPPESEVPPPAPAPAAPGAAPPPEAPGEPVPGEEAP
                     AVEKPKREPKKPKKRPSYEMKLFEKYELNDVVVHDAGLAKYMNLSPIVIPHTGGRWAN
                     KPFGKAKANLVERLINNMMRTENYTGKKSKSYRVVRSAFEIIEKRTQKNPVQVLVDAL
                     EKAAPREEVTRLRFGGISVPRAVDVAPSRRLDLALRSICQGTVSATFKNRKPVEECLA
                     DEILLAAKGDMQSSAIAKKEELERVASSAR"
     gene            2326..>3855
                     /locus_tag="VNA10_07590"
     CDS             2326..>3855
                     /locus_tag="VNA10_07590"
                     /inference="COORDINATES: protein motif:HMM:NF026240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LAGLIDADG family homing endonuclease"
                     /protein_id="HVG37582.1"
                     /translation="MGRKEENIKKAQTLLHLKDRIRNIGTAAHIDHGKCIGPNARVWV
                     DGQWLRAVDLWKRFQDEPEVENHQEADVRNVVHASLWTRSIDIRTGDTSFAQITHVWR
                     LRAREPLVEIETRDGRRIRTTPEHKFVTAVGHSLSFREARELEPGIMLAVPRRLPSRT
                     DDDGWADLEGEILTLLASDPRFLFELTEAGRTLVGVSGKIRGPALLSAARMTGVPFDH
                     LYRLVWRVTYRLTKGRTKSASPMYLPKRDAMEHVFRFFGLLYGDGDGNGFLHGADELI
                     LREALATLQGLVPRPAIARHPPRVPRVEMRSKTLLMFLHGVFGYPLRNKARSMHLPAL
                     LFTAPLPLAAAFVQGYLDADGTVERGRRAVSASSASESFLDDLQLLLLRFGVRAILDR
                     RAGKTTLYISGKKNLERIPRFKDSEKAALRDKLEERAGPSYVVDLLPVDWSRLHARSW
                     KTRMYANLEQRPSAASLLSMVDVDLPALEPVLNEEVAFVEVRAVRRAIEEYVYDFSVP
                     GP"
BASE COUNT          738 a         1253 c         1206 g          658 t
ORIGIN      
        1 catggccctg gggctcgcat gcttcggcgg cctcgcgatc ctcctcgcgc tcgcgacggg
       61 cgccggcagt ccggacttac ggcagctggt ctcccgatgg ccgctgatcg tggtcttcgc
      121 cgccggcgcg gggacgttcc cgcccgccgc cctcgcctac ctaggggaca tcgtcgagca
      181 tgcggtgact gggaccacct tcgggatcta ctcgatcatc ttcgggtccg ggctcatcgt
      241 cggcccgatc ctcggcggcg cgctcacgca ggcgctcgga ccgatcgcct tcgcggtgat
      301 tgccctcggg ctgatcggaa tctccggggc cggcgtcttg ttcatccgcg aaccgctgaa
      361 gacgccgcgg accgcggtcg cccccgagag cccgacccct ccggagatgc gatgagggca
      421 tccgtcccgc gttcctgatt ctgacggcgc cggattgaag tacccgcgct ttcgtcggac
      481 ggagcgtggc ctcgagcacg tcgagcctcc tggatttgga cccgatcgcg tacttcgcga
      541 tgggcggctt cgccctgttc ttcggcctct tcttcttcgt cctcctctat gacatcccgc
      601 tcttcctgta cgtgtgcggt ccgatcaccg tcatccccgg tgtcatcgcg atcgccgtcg
      661 gcgtgcgaca atggcgccgc gaacgagcgg tggtcgagtt cgcgaactgg ctcacgtccc
      721 aacgtcggat cccgatggat gtcatggcgc aacggctcgg gaagacgcgg ttcgagacgg
      781 agaagctcct cgggaaggca ctcggcgagg gcctcgtcaa aggcgcgatc gatcggacca
      841 cggacgagtt cgtgtcccag gacgccgtga aacaagagca cttcgtcggc acctgcccga
      901 actgcggcgg caacgtcgac acgtggtact tccccgagga acgggtcaca tgcccatact
      961 gcgaacgcgc cctcgccctt ccggcagacg cgtgatttcc gcgggacgcg acccttaaat
     1021 agcacatgac ttttagagcg caccctaccg gggtcgatcg ttggcacggg gtctgttcgc
     1081 ggcgcgcaaa ctgaagggcg aacgccagac ccgacggtgg tcggaccgat attacaagcg
     1141 gcgcgtgttg cacctcaagg agaaatcgga cccgctcgaa ggctccccgc aggcgaaggg
     1201 gatcgtcctc gagaaggtcg cgatcgaggc gaagcagccc aactccgcac ttcgcaagtg
     1261 cgtgaaggtc cagctcatca agaacggacg gcaggtgacg gccttcgccg tcggcgacgg
     1321 cgcgatcaac ttcatcgatg agcacgacga ggtcctcgtc gaagggatcg gaggccgcat
     1381 gggccggtcg tacggggaca tccccggcgt gcggtacaag gtcatccagg tgaacggcgt
     1441 cagcctcgac gagctcgtcc gcggccgcaa agagaagccg gtgaggtagg cccgtggaac
     1501 ccgagacgcc gcctccaccg cctccggaat ccgaagttcc gccgccagcc ccggcgccag
     1561 ctgcaccggg agccgcgccg ccgcccgaag ctccgggcga gccggtcccg ggggaagagg
     1621 ccccggccgt cgagaagccg aagcgggagc cgaagaagcc gaagaaacgg cccagctatg
     1681 aaatgaagct gttcgagaag tacgagctga acgacgtcgt ggtccacgat gccgggctcg
     1741 cgaaatacat gaacctctct ccgatcgtga tcccgcacac gggcggccgc tgggcgaaca
     1801 aaccgtttgg caaggcgaag gcgaacctcg tcgagcggct gatcaacaac atgatgcgca
     1861 cggagaacta caccgggaag aagtcgaagt cgtaccgggt cgtgcggagc gccttcgaga
     1921 tcatcgagaa gcgcacgcag aagaatcccg tgcaggtcct cgtggacgct ctggagaagg
     1981 cggcgccccg ggaggaagtc acccgccttc ggttcggcgg catctcggtc ccgcgcgcgg
     2041 tggacgtcgc cccgtcgcgg cggctcgacc tagccctccg gagcatttgc cagggaacgg
     2101 tcagcgcgac gttcaagaac cgcaaacccg tcgaggagtg tttggcggac gaaatcctgc
     2161 tcgctgccaa gggcgacatg cagagttccg cgatcgcaaa gaaagaggaa ttggagcgag
     2221 tcgcgtcctc ggcgcgatga ttcgccctcc cgtggaccga aggtttaatt agcctcggtc
     2281 gggtgcgacc tcactcactg gcattcttgc ctaggtgtca cgccgatggg acgaaaagaa
     2341 gagaacatca agaaagccca aacgctgctc cacctgaagg accgcatccg caacatcggc
     2401 accgcggcac acatcgacca cggcaaatgc attgggccca acgctcgagt ctgggttgac
     2461 ggacagtggc tccgtgcggt cgatctttgg aagcgattcc aggacgaacc cgaagtcgag
     2521 aaccaccaag aggcagacgt acggaacgtc gtccatgcat cgctgtggac gcggtccatc
     2581 gacatccgaa cgggcgacac ctcgttcgcc caaataactc acgtgtggcg actcagggct
     2641 agggaaccgc tcgtcgagat cgaaacgcgc gacgggcgac gcatccggac gaccccggaa
     2701 cacaagttcg tgacggccgt aggccactca ctgagtttcc gggaagcgcg cgaactcgag
     2761 cctggaatca tgctcgcggt gccgcggagg cttccctcac gcactgacga cgacggatgg
     2821 gcggatctcg aaggtgaaat cctgacctta ctggcatccg acccgcggtt cctcttcgaa
     2881 ctcactgaag caggccgtac gctggtaggc gtcagtggga agattcgcgg acccgcgctc
     2941 ctgtccgccg cccgcatgac cggagtacct ttcgaccacc tctaccgcct agtctggcgg
     3001 gtcacctatc gactcacgaa gggacgcacg aaatcggcct cgccgatgta tctgccgaag
     3061 cgagatgcca tggagcacgt cttccgtttc ttcggccttc tttacgggga cggtgatgga
     3121 aacggtttcc tgcacggtgc tgacgagctc atcctgcgag aagcgctcgc cactctgcaa
     3181 ggcctcgtgc caaggccagc gatcgcgcga cacccacctc gggtcccgcg cgtcgagatg
     3241 agatccaaga cccttctgat gttcctccat ggtgtctttg gatacccgct gagaaacaag
     3301 gctcgttcga tgcacctccc cgctttactc ttcactgccc ctctgcctct cgccgccgcg
     3361 ttcgtacaag ggtatctcga cgcggacggg acggtagaac gcgggaggcg cgccgtgtct
     3421 gcatcgagcg cctcggagtc cttcttggac gacctgcaat tgctcctctt gcgattcggg
     3481 gtacgggcca tcctcgaccg gcgcgcgggc aagacgacct tatacatctc ggggaaaaag
     3541 aacctcgaac gaatcccgcg cttcaaggat tccgagaagg cggccttacg ggacaaactg
     3601 gaggaacgag cgggcccgtc ctacgttgtc gatctcctcc cggtagactg gtctcgacta
     3661 catgcgaggt cgtggaagac tcggatgtat gcaaacctcg aacaaagacc gtccgcggct
     3721 tcgcttctct cgatggtcga tgtcgacctg ccagcactag aaccagtcct caacgaagag
     3781 gtcgcattcg tggaagtccg cgcggtccgg cgagccattg aggaatacgt ctacgatttc
     3841 tctgtccccg gcccg
//
LOCUS       DATLMA010000592         1609 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_237713, whole genome shotgun sequence.
ACCESSION   DATLMA010000592 DATLMA010000000
VERSION     DATLMA010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237713"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VNA10_07595"
     CDS             <1..632
                     /locus_tag="VNA10_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37583.1"
                     /translation="GRDIERAVTLIADARRTLDVAFVDFIGGQIDTVIQELRAAKGDA
                     GVQAATPKLQEAVGRLEAGDYDAAWDRLQGALGTFHTEARDFHEARKAIDDGDRLARE
                     VRSMGMDLRDAERLLRQGRESLDRRDVAGALRFGQQAHERMNRDVPAFVQEQMRKARN
                     ELLDLKVRGNDLSRPIGILKDASAFVKRGAWGDALRQIREFRKAVQGLG"
     gene            complement(644..>1609)
                     /locus_tag="VNA10_07600"
     CDS             complement(644..>1609)
                     /locus_tag="VNA10_07600"
                     /inference="COORDINATES: protein motif:HMM:NF017570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HVG37584.1"
                     /translation="LMIDDIQFLSGMPEIHEELFHTFNDLHDTEKQIVLASDRPPKAI
                     PNLDERLISRFESGLVAGIEAPDLLMRVTILERRARDENVSIEGEVLTCIANLVDNNV
                     RELGGAFNRVVAFSSLMNRPITQDLAREVLSGATAEPSAEPIAPPASDRIASEERARL
                     EVSATANHELIPGRSYLIEEERPAKAFRLLTDFLGGGGGGLVITRTNPKRVRQAHDLP
                     TPRVLWLTDREGSAEETIAPTLERIVYEIEDFMGKQPRGAILLDGIEYLVSNNSFDAV
                     LMFVRRLLDAISESRYAFIISLGPATLRDQELKVLEREMEVIRYP"
BASE COUNT          275 a          520 c          548 g          266 t
ORIGIN      
        1 agggacgcga catcgaacgc gcggtcacgc tcatcgcgga tgcccgtcga acgctggacg
       61 tcgccttcgt cgacttcatc ggcggacaga tcgacaccgt catccaggaa ctccgcgccg
      121 ccaaagggga cgcgggcgtc caggcggcca cgccgaagct ccaagaggcc gtcggccggc
      181 tggaggcggg cgactacgac gcggcctggg accggctcca aggggccctc gggacgttcc
      241 acacggaggc gagagacttc cacgaggcgc gcaaggccat cgacgacggc gatcggctcg
      301 cgcgcgaggt ccgctcgatg ggcatggacc tccgcgacgc tgagcgactc ctccggcaag
      361 ggcgtgagtc gctcgaccgg cgggatgtcg ccggcgccct ccggttcggg cagcaggcgc
      421 acgaacggat gaaccgggac gtcccggcgt tcgtccaaga gcagatgcgg aaggcgcgca
      481 acgaactctt ggacctgaag gtgcgcggga acgacctctc ccgtccgatc ggcatcctca
      541 aagacgcgag cgcgttcgtg aagcgggggg catggggcga cgcgctccgg cagatccgcg
      601 aattccggaa ggccgttcag ggtctcgggt agcgcggccg cgatcacgga tagcggatca
      661 cttccatctc ccgctcgagc accttgagct cctggtctct cagggtcgcc ggcccgaggg
      721 agatgatgaa cgcgtatcgg ctctcagaga tcgcgtcgag cagccgccgg acgaacatga
      781 ggacggcgtc aaacgaattg ttcgaaacga ggtactcgat cccgtccaag aggatcgcgc
      841 cccggggctg ctttcccatg aagtcctcga tctcgtagac gatccgctcc agcgtcggcg
      901 cgatcgtctc ttccgccgac ccctcgcggt ccgtgagcca caggacgcgc ggcgtcggga
      961 ggtcgtgcgc ctgccggacc cgtttcgggt tcgtgcgggt gatgaccagg ccgccgcccc
     1021 cgccaccgag gaaatccgtc aagagtcgga acgccttcgc gggtcgttcc tcctctatca
     1081 ggtagctgcg gcctggaatg agttcgtggt tcgccgtcgc agagacctcc agccgggccc
     1141 tctcttccga cgcaatccga tccgaggccg gcggcgcgat cggttccgcc gacggttcgg
     1201 cggtcgcacc ggagaggacc tcgcgggcga gatcctgcgt gatcgggcga ttcatcaacg
     1261 aggagaacgc gacgactcgg ttgaacgccc ctccgagttc ccggacattg ttgtcgacga
     1321 gattcgcgat gcatgtcagg acttcccctt cgatggagac attctcgtcg cgggcgcggc
     1381 gttcgaggat ggtgacccgc atcaggaggt ccggcgcctc gatgcccgcg acgaggcccg
     1441 attcgaatcg ggagatcagc cgctcgtcga gattcgggat cgccttcggt gggcggtcgc
     1501 tcgccaggac gatctgcttc tccgtgtcgt gcagatcgtt gaaggtgtgg aacagttcct
     1561 catggatttc cggcatgccg ctcaggaatt ggatgtcatc gatcatgag
//
LOCUS       DATLMA010000593         1141 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_899988, whole genome shotgun sequence.
ACCESSION   DATLMA010000593 DATLMA010000000
VERSION     DATLMA010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899988"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..>1141)
                     /gene="speA"
                     /locus_tag="VNA10_07605"
     CDS             complement(173..>1141)
                     /gene="speA"
                     /locus_tag="VNA10_07605"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HVG37585.1"
                     /translation="YANDVVYTIKSICEEENVPAPTLVTESGRAVTAFHSVLVTNVLD
                     VADRIEQGRRVRVSPKDPNVVQELAGILKEVNAKNLRESYHDALQYKEELFTLFNLGH
                     LSLEDRSKGEILFWQICERIHRDLKTLKEIPEEFEDMETMLADKYVLNFSVFQSLPDS
                     WAIDQLFPILPIHRLNEKPTEFATLADITCDSDGKIERFIDLRDIDETLPLHPFRHDR
                     PYYVGFCLMGAYQDVLGDLHNLFGEAHEVLVRVDEEGRSEIEDVLPGETCERVLEYMN
                     YDRTHILESIHEQLVRASGAGLKKGEVQAIYREFEAVFPRYTYLER"
BASE COUNT          203 a          351 c          359 g          228 t
ORIGIN      
        1 aacgcgtagg tgaatcgttc gttcgatcca agtccctgga agaggacgaa gacgaggacg
       61 ttcaccagga tcaacagata gttgacgacc ggggtcagag tccggtccga gttgtcgtcg
      121 ccgatgggaa gcatcccctg acctcctctc gcccttcacc ccgagggaga actcagcgct
      181 ccaggtaggt gtacctcggg aacacggcct cgaactcccg gtagatcgcc tggacctcgc
      241 ccttctttag tcccgccccg gaagcgcgca cgagttgctc gtgaatcgac tcgaggatgt
      301 gcgttcggtc gtagttcatg tactcgagta cgcgctcgca cgtctcgccc ggcagaacgt
      361 cctcgatctc ggaacgccct tcctcgtcca cgcggacgag aacctcgtgc gcctcgccga
      421 agaggttgtg gaggtcgccg agcacgtcct ggtacgcccc catgaggcag aagcccacgt
      481 agtacggccg atcgtggcgg aaggggtgga gcggcagcgt ctcgtcgatg tcccgcaggt
      541 cgatgaagcg ctcgatcttg ccgtcggagt cgcacgtgat gtccgcgagg gtcgcgaact
      601 ccgtcggctt ctcgttcagc cggtggatcg gcaggatcgg aaagagctgg tcgatggccc
      661 aggagtccgg cagcgactgg aagaccgaga agttcaggac gtatttgtcc gcgagcatcg
      721 tctccatgtc ctcgaactct tccgggatct ctttcagggt cttcaggtcc cggtggatcc
      781 gctcgcagat ctgccagaag aggatctctc ccttcgagcg gtcctcgagg gagagatgtc
      841 cgaggttgaa aagcgtgaac agctcctctt tgtactgcag agcgtcgtgg tagctctcgc
      901 gaaggttctt ggcgttgacc tctttcagga tccctgcgag ctcctggacg acgttcgggt
      961 ccttcggcga cacccggacc ctccggccct gctcgatgcg gtccgcgacg tcgagcacgt
     1021 tcgtgacgag caccgaatgg aacgccgtca ccgcgcggcc cgactcggtc accagagtcg
     1081 gggcgggaac gttctcctcc tcgcagatcg acttgatcgt gtagacgacg tcgttggcgt
     1141 a
//
LOCUS       DATLMA010000594         1578 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_360578, whole genome shotgun sequence.
ACCESSION   DATLMA010000594 DATLMA010000000
VERSION     DATLMA010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360578"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="VNA10_07610"
     CDS             <1..551
                     /locus_tag="VNA10_07610"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37586.1"
                     /translation="QRVLNEAAYIRIDHKLNELYHASPLSPEAYFVGIAGGMLVAYLP
                     PSLFVLAILEILHPLSIVAWLVLAACLLAVWAVSSTIGYVVSTLFKDMKTIWPYSALL
                     TNLFGIVPPVFYPIRFVPTEWRSVVLLLPTSGAAVLVNGVAGLETISGNEAILAAAAL
                     AVESVALFVFGIYWARRMARER"
     gene            554..1318
                     /locus_tag="VNA10_07615"
     CDS             554..1318
                     /locus_tag="VNA10_07615"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HVG37587.1"
                     /translation="MAVEVNLAAYPQKGHVLAAWGLIGWRWIWRSPAAAIVPLLQPFF
                     FLYFLHLISDPSYFPLQVAGAMIFSTQNIGSWCLSDSAVFRIELRLQDIFVASPHSKV
                     RYLFGVAFSNIIPALPALVALGIILAMVTSVSLTAWLVIVACIVIIWVLYSAIGIAVS
                     SRLRSQREVWPVGNLIFTLLGILSPLYYPLSRLPPVWRELAQLLPATYAALLVQGTLG
                     LEPATATSLALDAGLLILSTAIGLGLAWWLYQWRER"
     gene            complement(1396..>1578)
                     /locus_tag="VNA10_07620"
     CDS             complement(1396..>1578)
                     /locus_tag="VNA10_07620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HVG37588.1"
                     /translation="WLGRRKGERALREAATAVEQAVESTLKKGTILTYDLGGTAKCSE
                     VGTAITSAMARPRKKS"
BASE COUNT          222 a          545 c          481 g          330 t
ORIGIN      
        1 gacaacgcgt cctgaacgag gccgcgtaca tccggatcga ccacaagttg aacgagctct
       61 accacgcgag cccgctctcc cccgaggcgt acttcgtcgg catcgctgga gggatgctcg
      121 tcgcgtacct gcccccgagc ctcttcgtcc tcgccatcct ggagatcctt cacccgctgt
      181 ccatcgtcgc gtggctggtc ctggcagctt gcctcctcgc ggtgtgggcc gtgtcgtcga
      241 ccatcggcta cgtcgtgtcg acgctcttca aggacatgaa gacgatttgg ccgtactcgg
      301 cgctcctgac gaatctcttc ggcatcgtgc cgcccgtgtt ctatccgatc cggttcgtcc
      361 cgaccgagtg gcggtcggtc gtccttctcc tcccgacgag cggggccgcg gtgctcgtca
      421 acggtgtggc cggtctcgag acgatcagcg ggaacgaagc aatcctcgcg gcggccgccc
      481 tcgcggtgga atccgtcgcc ctgttcgtct tcggaatcta ctgggcccgg aggatggccc
      541 gggagcgctg accatggccg tcgaagtcaa cttggcggcg tacccgcaga aaggccacgt
      601 gctcgcggcc tggggcctca tcggatggcg gtggatctgg cggagcccgg ccgcggcgat
      661 cgtcccgctc ctgcagccgt tcttcttcct ctacttcttg cacctaatct cagacccttc
      721 gtacttccct ctgcaggtgg caggggccat gatcttctcg acgcagaaca tcggaagctg
      781 gtgcctctcc gactccgcgg tcttccggat cgagctgcgt ctgcaagaca tcttcgtggc
      841 atctccccac agcaaggtca ggtacctgtt cggcgtcgcg ttctcgaaca tcatcccggc
      901 cctccctgcg ctcgtggcgc tcgggatcat cctcgcgatg gtcacgtcgg tgtcgttgac
      961 ggcctggctc gtgatcgtcg cgtgcatcgt gatcatctgg gtcctctact cggcgattgg
     1021 cattgcggtg tccagtcggc tgcggagcca gcgagaagtg tggccggtcg ggaacctgat
     1081 cttcacgctc ctcgggatcc tgtcgcccct gtactacccg ctctcccgcc tcccgcccgt
     1141 gtggcgggaa ctggctcagc tccttccggc gacctacgcg gcgctgctcg tccaagggac
     1201 gctgggactt gagccggcca ccgcgacgag cctcgcactc gacgcgggtc tgctcatcct
     1261 ctcgacggcc atcggcctcg gcctggcgtg gtggctgtac cagtggcgcg aacggtgaag
     1321 aattcgaatt caacgccgca agggtgacgg aagaatctcg agcggcattc ggataggacg
     1381 aacccgtcgc tcaggtcatg acttcttccg cggtcgagcc atcgcggagg tgatggccgt
     1441 tccgacctcg ctgcacttcg ccgtgccgcc gagatcgtag gtgaggatcg tgcccttttt
     1501 cagagtggac tcaacggctt gttcgaccgc ggtcgccgcc tcccgcaacg ccctctctcc
     1561 cttccgtcgg ccgagcca
//
LOCUS       DATLMA010000595         1480 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_541080, whole genome shotgun sequence.
ACCESSION   DATLMA010000595 DATLMA010000000
VERSION     DATLMA010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541080"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1043
                     /locus_tag="VNA10_07625"
     CDS             <1..1043
                     /locus_tag="VNA10_07625"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HVG37589.1"
                     /translation="IGSTGTLHLTSLIALFNPSFNAARFGVSAITCRNADVSNNFANC
                     NAQIIDTTQADRPWITSDGATIYISYHDSGSSTQIHVQRSDDDGFTWTRVADPITGQG
                     GLTAMSTFNNDQGPIVADPTTHSVFAIYAAGQGGLQKATSANFNNIVVSRSIDKGLTW
                     IPTIVFHAPVNTPLNNVFPALAVDPASGKVYASWSDSHTVWFAASTDHGSSWTSAVAV
                     NSGSAATALFPWVAAFAGKVDVVYYGTTASSKDDPAAVWNTYMAQTTDDGSDFVQTTV
                     SAHANHVGVICTFGTGCARGTRNLLDLFEVAINPQSGKAAIIFTDDTLTTYTRSDGTV
                     APLPQVIVAWES"
     gene            complement(1062..>1480)
                     /locus_tag="VNA10_07630"
     CDS             complement(1062..>1480)
                     /locus_tag="VNA10_07630"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HVG37590.1"
                     /translation="APKRRQLGFIVAATLIAMGGATFLWSGGEGIGGSYEGFLFLIGG
                     LFVPLLGVVIADSFVVRRGTYAAEEFFEGARPWRWSAFASWIPGAALYFMIVIFALPV
                     GATLPSFALAAGLQVVFSRLESSLTRPASAASGGDP"
BASE COUNT          299 a          489 c          455 g          237 t
ORIGIN      
        1 acatcgggtc cacgggaacg ctccacctta cctcactgat tgccttgttc aatccgtcgt
       61 tcaacgccgc tcgcttcgga gtatcggcaa tcacatgtcg caacgcggat gtctccaaca
      121 acttcgcgaa ctgcaacgcg cagatcatcg acacgacaca agccgaccgg ccgtggatca
      181 cgtccgacgg cgcgacaatc tatatttcgt atcatgacag cggctcgagt acccagattc
      241 acgtgcagcg atcggacgac gacggcttca cctggacccg ggtggccgat ccgatcacgg
      301 gccagggcgg cctgaccgcg atgtcgacgt tcaacaacga ccaaggtccg atcgttgcgg
      361 acccgaccac gcacagcgtg ttcgcgatat acgcggccgg acaaggtggc ctccagaagg
      421 ccacgagcgc gaacttcaac aatatcgtgg tctcccggag cattgacaag ggtctgacct
      481 ggattccgac gatcgtgttc cacgcaccgg tcaacacccc gctgaacaat gtcttcccgg
      541 ccctcgcggt cgatccggcg agcggaaagg tgtacgcatc gtggtccgac agccacacgg
      601 tctggttcgc ggcatcgacc gaccatgggt cgagttggac ttcggccgtc gccgtgaaca
      661 gcggttctgc ggcaacggcg ctgttcccgt gggtcgcggc gttcgccggc aaggtcgatg
      721 tcgtgtacta cggcaccacc gcgtcgagca aggacgatcc cgctgcggtc tggaacacgt
      781 acatggccca gaccaccgac gacggttcgg acttcgtcca gacgaccgtg tctgcgcacg
      841 cgaaccacgt cggggtgatc tgcacgttcg gcaccggctg tgcccggggc actcgcaacc
      901 tgctcgatct gttcgaggtc gcgatcaatc cgcagagcgg caaggcagcg atcatcttca
      961 cggatgacac gctgaccacg tacacccgga gtgatgggac cgtggccccg ttgcctcagg
     1021 tcatcgtcgc gtgggagtcc tgagcgcgga tctccaccgg ctcacggatc gccccccgag
     1081 gccgccgaag ccggccgcgt gagcgaggat tcgagtcgcg agaagacgac ctgaaggccg
     1141 gccgcgaggg cgaatgaagg gagggtggcg ccgaccggga gtgcgaagat cacgatcata
     1201 aagtagaggg cggcccccgg aatccagctt gcgaacgcgg accatcgcca aggtcgcgcg
     1261 ccttcaaaga actcctccgc cgcgtaggtt cctcgccgga cgacgaacga gtccgcgatg
     1321 acgactccga gaagcggcac gaacagcccg ccgatcagga aaaggaagcc ctcgtaggag
     1381 cctccgatgc cttccccccc gctccagagg aatgtggccc cacccatcgc gatcagggtc
     1441 gcggcgacga tgaaaccaag ttggcgccgc ttcggtgcca
//
LOCUS       DATLMA010000596         1638 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_541211, whole genome shotgun sequence.
ACCESSION   DATLMA010000596 DATLMA010000000
VERSION     DATLMA010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541211"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VNA10_07635"
     CDS             <1..251
                     /locus_tag="VNA10_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008425861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HVG37591.1"
                     /translation="TRIQKERFPDPQEYEKVAGSYRVDMDVLRDAKRGLIIMHPLPRV
                     TEIAPEVDRTKHAVYFKQAFNAVPVRMALLDLILGEGS"
     gene            248..703
                     /gene="pyrI"
                     /locus_tag="VNA10_07640"
     CDS             248..703
                     /gene="pyrI"
                     /locus_tag="VNA10_07640"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008085770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HVG37592.1"
                     /translation="MRELRVTPIKNGTVIDHIPAGLALKVLKILGIGDAVTSTVTVAM
                     HVPSQAMGWKDIVKVEDRELGGRELEKIALIAPTATVNVIRNYNVAEKRPLAPPDWAV
                     GILRCANPNCISNVREPIESSFVVRSKNPLRVVCKYCDRELEDIVSHIL"
     gene            800..1084
                     /locus_tag="VNA10_07645"
     CDS             800..1084
                     /locus_tag="VNA10_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019178566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HVG37593.1"
                     /translation="MLEELSEIIGLQVYTHNGVFLGNVNNLVVDVDNGAVDGIFVGET
                     NPLLVEGSRAVSVPYRWVQSVGDIVVLRYFPKRVSLRKGSAAPPIAAAAK"
     gene            1136..1567
                     /locus_tag="VNA10_07650"
     CDS             1136..1567
                     /locus_tag="VNA10_07650"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HVG37594.1"
                     /translation="MARRSRPAPQTPTVRFEVLELGRLHGHERTRPALLQELTDQIRK
                     DAYLRRPILVADVDLVILDGHHRVEAVRALGARRIPAYLVDYFSDVVQLSTWPDAVVS
                     VVTKEDVIRRGRTGDLFPPKTSRHTLTIELEDRPTDLDDLR"
BASE COUNT          308 a          524 c          529 g          277 t
ORIGIN      
        1 tcacccggat ccagaaagag cggttcccgg acccgcagga gtacgagaag gtcgccggtt
       61 cgtatcgcgt cgacatggat gtcctgcggg acgcgaaacg cggactcatc atcatgcatc
      121 cgctgccgcg ggtgacggaa atcgcgccgg aggtggatcg gacgaaacac gcggtgtact
      181 tcaaacaggc cttcaacgcg gtcccggtcc gcatggccct gctcgacctg atcctcggag
      241 agggatcatg agggaactcc gcgtcacccc gattaagaac gggaccgtga ttgatcacat
      301 tcccgcgggg ctcgcgctca aggtcctgaa gatcctaggg atcggggatg ccgtgacgtc
      361 gacggtgacc gtcgcgatgc atgtgccgag tcaggcgatg ggttggaaag acatcgtgaa
      421 ggtcgaggac cgcgagctcg gcggccgcga actcgagaag attgccctca tcgcccccac
      481 cgccaccgtg aatgtgatcc gcaactacaa cgttgcggag aaacgcccgc tggcgccgcc
      541 ggattgggcg gtcggcatct tgcgatgcgc gaatccgaac tgcatctcga acgtccgcga
      601 gccgatcgag tcgtcgttcg tcgtgcgatc gaagaacccc ttgcgcgtcg tctgcaagta
      661 ctgcgaccgg gagctcgaag acatcgtcag ccacattctc tgacgcgaac atgggcggcg
      721 tcggactcga ttccctgggt caccgaagcg tttaagaacg gcccctcaga tacgcgccaa
      781 cagaagggat ggtgactctt tgctcgaaga gctgtccgaa atcatcgggc tccaggtcta
      841 cacgcacaac ggcgtgttcc tgggaaacgt gaacaacttg gtcgtggatg tggacaacgg
      901 cgcggtcgac ggaatctttg tcggggagac gaatccgctc ctcgtcgagg ggagccgcgc
      961 agtgagcgtt ccgtaccgct gggtgcagag cgtcggggat atcgtcgtgt tgcgatactt
     1021 cccgaagcgc gtctccctgc ggaaggggag cgccgcgccg ccgatcgcgg ccgccgcgaa
     1081 gtagccccgc gcgccgctgc gaaaccgtta ttcccgcagg cccgttgctc tgccgatggc
     1141 ccgccgcagc cggccggctc cgcaaacgcc gaccgtccgg ttcgaggtgc tggaactcgg
     1201 taggctccat ggccacgagc gcacccgacc cgccctcctc caggaactca cggaccaaat
     1261 ccggaaggac gcatacctcc ggcgaccgat cctcgtggcc gacgtcgacc tcgtgattct
     1321 cgatggccac caccgcgtgg aagcggtccg ggctctcggc gcccgcagga ttccggcgta
     1381 cctcgttgac tatttctcgg acgtcgtgca gctcagcacc tggcccgacg ccgtggtgtc
     1441 ggttgtcacg aaggaagacg tgatccgccg cggtcggacg ggcgacctgt tcccgccgaa
     1501 gacatctcgg cacaccttga cgatcgagct cgaggaccgg ccgaccgact tggacgacct
     1561 gcgatgatca cgtgcgcggt ccgaccgagt cgttccaggc ggagcggacc taatggcgcc
     1621 cctcgatgaa gatggcgg
//
LOCUS       DATLMA010000597         1588 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_361241, whole genome shotgun sequence.
ACCESSION   DATLMA010000597 DATLMA010000000
VERSION     DATLMA010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361241"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1182)
                     /locus_tag="VNA10_07655"
     CDS             complement(<1..1182)
                     /locus_tag="VNA10_07655"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013824776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HVG37595.1"
                     /translation="MARDFFTMDDFDLSGRTVLLRVDINSPIDPATGELLNDARIREH
                     LTTIRELRGSKVVLLAHQSRPGKDDFTTLEVHADRIAALLGRPVRYVPSLFGRPAIDA
                     IDAMHFGDVIVLENTRFYSEEDALADAKLDKMAKTHIVSRLAPHADYFVLDAFAAAHR
                     AQPSLVGFCEVLPSLAGRVMERELTMLAQAVQQPERPKIALLGGVKADDSIAVARHML
                     EKDLVDSVLTSGGVANLFLDAAGIDPGKPTTDFMRREVEDYEAHRAMCKELLARFPGR
                     IFRPTDVVLNDEGERRPVPVSALPAKWPVYDIGLDTIAHYVEEIHRAKTIFFNGPAGV
                     FELEPFSVGTRELLTAIAEADGFSIVGGGHTVAAVEQLGLSDRIDHVSTGGGALINFL
                     AG"
     gene            1314..>1588
                     /locus_tag="VNA10_07660"
     CDS             1314..>1588
                     /locus_tag="VNA10_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37596.1"
                     /translation="MGRGHRGSLTPQDLLLPEGKLIRTTRGGPNALKLLLLDLKKYSF
                     SGYVRTVRSGAGRRAEGIVLLRGGNPEASLYHRDGAQDRGRSALKKV"
BASE COUNT          282 a          510 c          522 g          274 t
ORIGIN      
        1 tcccgccagg aagttgatga gtgcgccccc tcccgtgctc acgtgatcga ttcggtccga
       61 gagcccgagt tgttcgaccg ccgcgaccgt gtgtccacca ccgacgatcg agaagccatc
      121 cgcttcggcg atcgcggtga gcaactcgcg cgtgccgacc gagaacggct cgagttcgaa
      181 gactcccgcc ggaccgttga agaaaatcgt cttcgcgcgg tggatctcct ccacgtagtg
      241 ggcgatcgtg tccagtccga tgtcgtacac cggccacttc gccgggaggg cggacaccgg
      301 gaccggcctg cgctcaccct cgtcgttgag gacgacatcc gtgggccgaa agattcgccc
      361 agggaatcgc gcgaggagtt ccttgcacat cgcccggtgg gcctcgtagt cctcgacctc
      421 gcgtcgcatg aagtcggtcg tcggtttgcc ggggtcgatt ccggcggcgt cgaggaacag
      481 gttcgccacg ccgcccgagg tgagcacgct gtccaccaga tctttttcga gcatgtgacg
      541 cgcgaccgcg atcgagtcgt ccgccttcac accgccgagg agagcgatct tcggccgctc
      601 gggctgctgg accgcctgag cgagcatcgt gagctctcgc tccatcaccc ggcccgcaag
      661 ggaagggagg acctcgcaaa acccgacgag gctcggttgc gcccggtggg ccgcggcgaa
      721 cgcatcgagg acgaagtaat ccgcgtgcgg cgcgagccgg ctcacgatgt gggtcttcgc
      781 catcttgtcg agtttggcgt ccgcgagggc gtcttcctcc gagtagaaac gcgtgttctc
      841 gagaacaatt acgtccccga agtgcatcgc gtcgatcgca tcgatcgcgg gtcgaccgaa
      901 gaggctcggc acataccgca cgggccgtcc gaggagcgcg gcgatccgat ccgcgtggac
      961 ctcgagggtc gtgaagtcgt ctttccccgg tcgcgactgg tgcgcaagca agacgacctt
     1021 cgaacctcgc agctcgcgga ttgtcgtgag atgctcgcgg atccgcgcgt cgttcaacag
     1081 ctcgccggtc gcgggatcga tcggagagtt gatgtccacg cgcaggagga ccgtacgacc
     1141 cgaaaggtca aaatcatcca tcgtgaagaa gtcccgggcc atctgcatac gacgcaaaat
     1201 cccggagcgt aatagtcctt tcgcatcgcg aggtcgcgtc gtcggccgcg ccgcgtgcct
     1261 ccggttctca aacgaggaaa ctgggttgga acctttttag agggacctcg ggaatgggcc
     1321 gaggccaccg agggagcctc acgcctcagg acctcctcct gccagaggga aaactcatcc
     1381 gcaccacgcg gggcggtcct aacgcgctca agctgctcct cctcgacctg aagaagtatt
     1441 cgttctccgg ctacgtccgg acggttcgga gcggggccgg gaggcgggcg gaagggattg
     1501 tgctcctccg cggcggaaac ccggaggcca gcctttacca tcgcgacggg gctcaggatc
     1561 gcgggcggag cgccctgaag aaggtgtg
//
LOCUS       DATLMA010000598         1180 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_901041, whole genome shotgun sequence.
ACCESSION   DATLMA010000598 DATLMA010000000
VERSION     DATLMA010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901041"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VNA10_07665"
     CDS             complement(<1..268)
                     /locus_tag="VNA10_07665"
                     /inference="COORDINATES: protein motif:HMM:NF015019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HVG37597.1"
                     /translation="MDASPLLWVVPISGVIAVLVAAYFAWDVLRSDTGTPEMQKVAGA
                     IYTAAVAFIKRQYRTIALLAVGGMVVIGLVIYFFESAPGVSASEL"
     gene            406..672
                     /locus_tag="VNA10_07670"
     CDS             406..672
                     /locus_tag="VNA10_07670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37598.1"
                     /translation="MPPQKASKSAPKADASEKAKSKDRDWLTTAELATKIGWREHALR
                     DAMRGKDLPGVRRTAFGYHIEGESVDAIKGVLGAPPPKPNASRR"
     gene            complement(704..>1180)
                     /locus_tag="VNA10_07675"
     CDS             complement(704..>1180)
                     /locus_tag="VNA10_07675"
                     /inference="COORDINATES: protein motif:HMM:NF016439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HVG37599.1"
                     /translation="PMTDQDRQHIRDYVTRAKFFIDNINQRRQTILRITEVIVECQHD
                     FLASGIQSLRPLTRAEVGERIGMHESTVSRATAGKFVLLPSGQVVPFAVFFTASLGVK
                     DVIKQIIENEDRTRPYSDQEIVEKLRNDNGIRLARRTVAKYREELKILPARLRKHS"
BASE COUNT          228 a          376 c          392 g          184 t
ORIGIN      
        1 cgagctcgct cgcggacacg ccgggtgccg actcgaagaa gtagatgacg agaccgatga
       61 cgaccatgcc gccgaccgcg aggagcgcga tcgtgcggta ctggcgcttg atgaaggcga
      121 cggccgcggt gtagatcgcg ccggcgacct tctgcatctc tggggtgccg gtgtcggagc
      181 ggagcacgtc ccaggcgaag taggcggcga cgaggaccgc aatgactcca gagatcggta
      241 cgacccacaa caggggcgag gcgtccaacg aaaagccctc cactgacgat cgagaaaact
      301 gatggacaag aagcaagcgc ccgccccgac ggagggggct gcagcgctct tcgaccagtc
      361 tacggaatcg cgcgcgatgc ggcaaaccgc cgtatcgttc aattcatgcc cccacagaaa
      421 gcatcgaaga gcgcgccgaa ggccgacgct tcagagaagg ccaagagcaa ggaccgcgac
      481 tggctgacca cggcggaact cgccacgaag atcggttggc gcgaacacgc gctgcgcgac
      541 gcgatgcgcg gcaaggatct cccgggagtc cgacggaccg ccttcggcta ccacatcgag
      601 ggtgagtcgg tcgacgcgat caagggcgtc ctgggagcgc cacccccgaa gccgaacgcc
      661 tcacggcgtt agagacgacc cgcgccgcgc cggacggact tgcttagctg tgtttcctta
      721 accgggccgg aaggatcttc agctcctcgc gatacttcgc gaccgtccgc cgcgccagcc
      781 tgatcccgtt gtcgttgcgc agcttctcca cgatctcctg gtcggagtac ggacgcgtgc
      841 ggtcctcgtt ctcgatgatc tgcttgatga cgtccttgac gccgagagac gccgtgaaga
      901 acaccgcgaa ggggaccacc tggccgctcg gcaggaggac gaacttgccc gcggtcgcgc
      961 gtgagacggt cgactcgtgc atgccgatgc gctcgccgac ctccgcccgc gtcagtggtc
     1021 gcagcgattg gatgcccgac gccaggaagt cgtgctggca ctcgacgatg acctccgtga
     1081 tccggaggat cgtctgccgc cgctggttga tgttgtcgat gaagaacttg gcgcgcgtca
     1141 cgtagtcgcg gatgtgctgc cgatcctgat cggtcattgg
//
LOCUS       DATLMA010000599         2685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_478910, whole genome shotgun sequence.
ACCESSION   DATLMA010000599 DATLMA010000000
VERSION     DATLMA010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478910"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VNA10_07680"
     CDS             <1..229
                     /locus_tag="VNA10_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37600.1"
                     /translation="FLLAHRGVRMMRGGLLYRLSIGLAAVGIALSLSAGFRIVLADTI
                     LPDAFLVLALIILFYIGYSAWLSAHQMPAEA"
     gene            201..479
                     /locus_tag="VNA10_07685"
     CDS             201..479
                     /locus_tag="VNA10_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37601.1"
                     /translation="MPTRCRPKRETLGVKAAYELIEADMRAIWGDMALAMLRKRLRDV
                     RADLSSLTEADLEKVVDLLRERTLPSIMGEDGAEAKAKQYRSWVANGS"
     gene            complement(536..2110)
                     /locus_tag="VNA10_07690"
     CDS             complement(536..2110)
                     /locus_tag="VNA10_07690"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HVG37602.1"
                     /translation="MAKYVLAADYTLMTDYRNVPLATFFSCIPTDYWHSRLVFRILAD
                     PPKLDPEGRPIRVPYGLRKVEASLVRAYGRDAVVIADPRNIDRYIDDETEVVGLSPMD
                     PLGLGPVSMSFTMGGVLTPFTKAMFLELVRRVQRPNRKYKVVLGGPGAWHFDYRPEMQ
                     ASLGIDHIVHGEVDHLVPEIFDRIVNDHAPPVMRFTNATAPTVDQIPKILGPTMHAMN
                     EVMRGCGRGCEFCEVTLRRPRYFPFDYIGDEIAMNTKVGESSIQLHSDDIFLYNLENW
                     KTMEPNEDAVKDLFRYVMAQPGVSHCYPTHGTVSAAVTNPGLIRDISDIVHAGPRKWV
                     GIQSGIETGSPALSRAVLHRKAAPFTAEEWPDLVVQGTEILNRNYWYPAFTIILGLPG
                     ETPEDAWMTVDLLDRMEQIPDSHFITAPLTFVPIGVLRGEEFYNIDEMIDESRFNVAY
                     RAWRHVLLEIDTDLWQLTRLPAPTRALIVATARIGGRYILGIMHRYARRMGFRIRPPA
                     TTRRQAEGHTVSFPAA"
     gene            2299..>2685
                     /locus_tag="VNA10_07695"
     CDS             2299..>2685
                     /locus_tag="VNA10_07695"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HVG37603.1"
                     /translation="MADLGEKAPDFTVLSDEGKPFTLSNELGRGPVILSFYVWDFTNV
                     CQGQLCAMRDSMGDLQKWGAKVFGISTDSHHSHRVFKEQNHLNYPLLSDWNKKVSTAY
                     GVLYDRFGSFGLQGVTKRSVFVLDANG"
BASE COUNT          477 a          817 c          871 g          520 t
ORIGIN      
        1 attcctgctc gctcaccgag gcgttcgaat gatgcgcggc ggtctcctgt atcgtttgag
       61 catcggcctc gccgcggtcg ggatcgcgct gagcctgagc gccggcttcc gcatcgtcct
      121 cgccgacacg atccttcccg acgcgttctt ggtcctggcg ctcatcatct tgttctacat
      181 cgggtacagc gcctggctca gtgcccacca gatgccggcc gaagcgtgag accttgggcg
      241 tgaaggcggc atacgagctc atcgaggccg acatgcgggc catctgggga gacatggctc
      301 ttgcgatgct ccgcaagagg cttcgcgacg ttcgcgcgga cctctcgagc ctgacggaag
      361 ccgacctcga gaaggtcgtc gatctgcttc gtgagcgaac gcttccgtcg atcatgggag
      421 aggacggcgc ggaggcgaag gctaagcaat accggtcatg ggttgcgaac ggaagctgag
      481 tccctcttcc tcgccagaat ctgagcggcc gaccgggccg cgtcgacctc ggtactcatg
      541 cggccgggaa gctgacggtg tgtccttccg cctggcggcg tgtcgtcgcc ggcggacgga
      601 ttcggaagcc catccgcctc gcataccggt gcatgattcc gaggatgtac cggcccccga
      661 tccgtgccgt ggcgacgatc agcgccctcg ttggggcggg gagccgcgtg agctgccaca
      721 gatcggtgtc gatttccagg aggacgtggc gccacgcgcg gtaggcgacg ttgaaacgcg
      781 actcgtcgat catctcgtcg atgttgtaga actcctcgcc ccggagcacg ccgatcggca
      841 cgaacgtgag aggcgcggtg atgaaatggc tgtccgggat ctgctccatc cggtccagga
      901 ggtccacggt catccacgca tcctccggag tctcaccggg caggccgagg atgatcgtga
      961 acgcaggata ccaatagttg cggtttagaa tctccgtacc ctgtacgacg aggtccggcc
     1021 attcttcggc ggtgaacgga gcggccttcc ggtgcagcac ggctcgtgag agcgcggggc
     1081 tccccgtctc gattccgctc tggatgccga cccacttgcg cgggccggcg tgcacgatgt
     1141 ctgagatgtc ccgaatcagc cccgggttcg tgaccgcggc gctgacggtc ccgtgcgtgg
     1201 ggtaacaatg agagacgccg ggttgggcca tgacgtaccg gaagaggtcc ttgaccgcgt
     1261 cctcgtttgg ctccatcgtt ttccagttct cgagattgta caggaagatg tcgtccgaat
     1321 ggagttggat cgacgattcc ccgaccttgg tgttcatggc gatttcgtcg ccgatgtagt
     1381 cgaacgggaa ataccggggg cggcggagtg tgacttcgca gaactcgcag ccacggccgc
     1441 atccccgcat cacctcgttc atcgcgtgca tcgtcggacc gaggattttc gggatttggt
     1501 cgaccgtcgg ggcggtcgcg ttggtgaagc gcatgaccgg gggcgcatga tcgttcacga
     1561 tccgatcgaa aatctccggg acgaggtggt cgacctcgcc gtggacgatg tggtcgatgc
     1621 cgagtgatgc ctgcatttcc gggcgatagt cgaaatgcca cgcgcccggc ccgccgagga
     1681 cgaccttgta tttccggttc ggtcgctgga cgcgccggac aagctcgagg aacatcgcct
     1741 tcgtgaacgg cgtgagaacc ccgcccatgg tgaaggacat gctgacggga ccgaggccga
     1801 ggggatccat cgggctcagt ccaaccacct ccgtctcgtc gtcgatgtat cgatcgatgt
     1861 tccgagggtc ggcgatgacg accgcgtcgc gcccgtacgc gcgaacgagc gatgcctcga
     1921 ctttccgaag gccgtacggc acccggatcg gccgcccttc cgggtcgagc ttcggcgggt
     1981 ccgccaggat gcgaaacacg aggcgggagt gccagtagtc cgttggaatg cagctgaaga
     2041 acgtcgccag agggacattg cggtagtccg tcatcagtgt gtaatcggcg gcgagcacgt
     2101 acttcgccat tcgttccccc ctagccgttg ttcccccaag cgatgcgttc ggtctagttc
     2161 agcattccct ctggacaggt gagcccataa tgggctccac ccgttagata tacattccgt
     2221 tatgcgacat cgcagcttcg cgcagtgtcg aagcgaaagg gttatctccg gcgtacctct
     2281 cgacggccgg gaacctccat ggcagacctc ggcgagaagg cgccagactt cacggtcctg
     2341 agcgacgaag gcaagccctt caccctctcg aacgaactcg gcagaggccc ggtcatcttg
     2401 tccttctacg tgtgggactt cacgaacgtg tgccaaggtc agctctgcgc gatgcgcgac
     2461 tcgatgggag acctccagaa gtggggtgcg aaggtgttcg gcatcagcac ggacagccac
     2521 cacagccatc gcgtcttcaa ggaacagaac cacctcaatt acccgttgct cagcgactgg
     2581 aacaagaagg tcagcacggc gtacggggtg ttgtacgatc gcttcggaag tttcggcctt
     2641 cagggcgtga cgaaacggtc ggtcttcgtg ctcgacgcga acggg
//
LOCUS       DATLMA010000600         1451 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_119402, whole genome shotgun sequence.
ACCESSION   DATLMA010000600 DATLMA010000000
VERSION     DATLMA010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119402"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..638)
                     /locus_tag="VNA10_07700"
     CDS             complement(180..638)
                     /locus_tag="VNA10_07700"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37604.1"
                     /translation="MESAGVVAYLFGLFLYAIAAAVVLPIPVELLLLLYPEVNPAFKA
                     IALGLGKAVGAIVVFFVGNRVNPYIERWMDRHPIGMRVLKLLEGFVRRTGWVGLTILL
                     AIPFMSDTAVNYFYSLLNEEGHAIGRWHFVLANLIGGIVRAYVFLWLLPR"
     gene            complement(799..>1451)
                     /locus_tag="VNA10_07705"
     CDS             complement(799..>1451)
                     /locus_tag="VNA10_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37605.1"
                     /translation="SMRQDAPVGYNRGRTNDHPRIAVLTQGEAEGRVLVVFPSAKVPT
                     SAPSTAQNLVSINVFLSFSDDGVATWSSPKSIAGSVPATGVKRFWPVVTVGSEGSVDV
                     VYYESQEQAAPDGSNCNVGIGGVLRRIGPAHSFVDTKIVRSDDGGQSFGTPVRVSSVT
                     SDWCAGTVNIRPNFGDYIGAATVGQTTFAVWADSRETISIGGVPRHTVDVFFAPVT"
BASE COUNT          282 a          468 c          459 g          242 t
ORIGIN      
        1 gaccacgctc cgcgcggccg cgcgggtcat gcttgacaag aagtcccgat gggttgtcgt
       61 gacgcgcctc gacaacgtgg aaggcatcat cacggcgagc gacctgacgt ggggtttcct
      121 ggagacattc gcgcgggcct cgaagcgcgg catcgcgccg aaataagcgg gccgggttct
      181 catctcggga gcagccaaag gaacacgtag gcccgtacga tcccgccaat caagttggcg
      241 aggacgaagt gccatcgacc gatcgcgtgg ccttcctcgt tcaacaggga atagaagtaa
      301 ttcaccgcgg tgtcgctcat gaacgggatc gcgagcaaga ttgtcaggcc gacccatccg
      361 gtccgccgca cgaacccttc gagcaatttc aggacccgca tgccgatcgg atgccggtcc
      421 atccaacgct cgatgtacgg attcaccctg ttcccgacga agaagaccac gattgcgccg
      481 acggcctttc cgagtccaag tgcaatcgcc ttgaacgccg gattgacttc cggatacagc
      541 aggagcagca gctcgaccgg aatcggcagg acgaccgccg cggcgatcgc gtacaggaac
      601 aggccgaaga ggtaggcgac gacgccggcc gactccaagc cgagttggag cgcggtgaac
      661 gtgagtacgc cgatgtcgga ccctctctcc catgcgggaa tggtccggag aggctaaagg
      721 cttctccgag acggtcgccg ctgggaaccc gcggcaggca ttcctggccg acccgaacgt
      781 cctgccatct tcttcggcct atgttaccgg cgcgaagaag acatcgaccg tgtgccttgg
      841 tactccaccg atcgagatgg tctctcggct gtccgcccac accgcgaagg tcgtttggcc
      901 gaccgtagcc gccccgatgt agtctccgaa gttcggccgg atgttgaccg tgcccgcgca
      961 ccaatcggac gtcaccgagc tgacccgcac cggagttccg aaactctgac cgccatcgtc
     1021 cgagcgaacg atcttcgtgt ctacgaacga gtgagccggc ccgatgcgcc gcagcacgcc
     1081 gccaatcccg acattgcagt tggacccgtc gggcgctgcc tgctcctggc tttcgtagta
     1141 gacgacgtcg acggagcctt cggaaccaac ggtcacgacg ggccagaagc gcttgacacc
     1201 cgtcgccggc acggagcccg cgatggattt cggggagctc caggttgcaa ctccgtcgtc
     1261 cgagaagctc aggaagacgt tgatggagac caagttctgc gcggtgctgg gagccgaggt
     1321 ggggaccttg gcgctcggaa agaccacgag gacgcggccc tcggcctcgc cttgggtgag
     1381 caccgcgatc cgcgggtgat cgttggtcct gccgcggttg tagccaaccg gcgcatcctg
     1441 ccgcatcgag t
//
LOCUS       DATLMA010000601         1287 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_901651, whole genome shotgun sequence.
ACCESSION   DATLMA010000601 DATLMA010000000
VERSION     DATLMA010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901651"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..530
                     /gene="erpA"
                     /locus_tag="VNA10_07710"
     CDS             105..530
                     /gene="erpA"
                     /locus_tag="VNA10_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HVG37606.1"
                     /translation="MRGSAMIQVTLTETAANKVKELIQRSDPETGQPLGSLEDTYLRM
                     YVAGGGCSGFRYGLALDRKIHEDDEVVQVHGLKVLVDGNSKEYLDGSSVDYAESVAGS
                     GFLVSNPNNWSTCGCGQSFNPKGEEAPDQQHQSAHAHTH"
     gene            complement(562..1161)
                     /locus_tag="VNA10_07715"
     CDS             complement(562..1161)
                     /locus_tag="VNA10_07715"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HVG37607.1"
                     /translation="MPLNVLIIDNYDSFVYNLYQCLGELGAHPVVYRNDAISVEAIRR
                     LDPDAIVLSPGPGHPANARDFGVCTDILRELGSTIPMLGVCLGHQGIGTAFGAQVGHA
                     ARILHGKTSLVRHDGRTIFEGLPNPIAAGRYHSLAIARESIPPDLEVSATSGDGEIMA
                     VRHRRHPVEGIQFHPESVLTPDGPRLLGNFLRIAREELR"
     gene            complement(1152..>1287)
                     /locus_tag="VNA10_07720"
     CDS             complement(1152..>1287)
                     /locus_tag="VNA10_07720"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012966378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HVG37608.1"
                     /translation="ETMTPTEIIVTGRHDPCIVPRAVPVVENVAAMVILDLMIVGGFL
                     "
BASE COUNT          271 a          381 c          412 g          223 t
ORIGIN      
        1 aacgccggta catggggaag ctcctcgagt gagccgccag agaggctcgg agtcgcgcaa
       61 ctggccacaa aagggttaaa taacggcggc atcgtgttcg ggagttgcgg ggtagcgcaa
      121 tgattcaagt gaccctgacg gaaaccgcag cgaacaaagt caaggagctc atccagaggt
      181 ccgatcccga gaccggccag ccattgggtt ccctcgagga tacctatctc cggatgtacg
      241 tggcgggcgg gggttgctcc ggcttccgct acggcctcgc actcgatcgg aagatccacg
      301 aggacgacga ggtcgtccaa gtgcacggac tcaaggtcct cgtcgacggc aacagcaagg
      361 agtacctcga cggctcgagc gtggactatg ccgagagtgt cgcgggcagc ggcttcctcg
      421 tgagcaaccc gaacaactgg tcgacctgcg gatgcggcca gagcttcaac ccgaagggcg
      481 aggaagctcc cgaccagcag caccagtccg ctcacgcgca cacgcactga cgagacgaat
      541 cttccctttt cgatttccag gtcagcggag ctcttcccgt gcgatgcgga ggaaattccc
      601 gaggagccgg ggaccgtccg gtgtgagaac cgattccgga tgaaactgaa tcccctcgac
      661 cggatgccgg cggtgtcgta cggccatgat ctctccatcg cctgacgtcg cgctgacttc
      721 tagatcgggc ggtatcgatt cacgggcgat cgcgagggag tggtatcgac ccgccgcgat
      781 cgggttcggg agaccttcga aaatcgtacg gccatcgtga cgaaccagac tcgtcttgcc
      841 gtgcaggatg cgagccgcgt ggccgacttg ggcgccgaat gcggtcccga ttccttggtg
      901 gcccagacac accccgagca tcgggatcgt cgacccgagt tcccgcagaa tgtctgtaca
      961 cacgccgaaa tcccttgcat tcgcggggtg gccgggaccc ggggatagaa cgatcgcatc
     1021 cggatcgagg cgacggatcg cctcgaccga aatcgcatca ttgcgataga cgaccggatg
     1081 ggcgccaagt tcccctaagc attggtacag gttgtagacg aacgagtcgt agttgtcgat
     1141 gatcagaacg ttcagaggaa tccccccacg atcatgagat cgaggatcac cattgcggcg
     1201 acattctcga cgacgggtac ggcccgaggg acgatgcaag ggtcgtggcg gcccgtgacg
     1261 atgatctcgg tcggcgtcat ggtctcg
//
LOCUS       DATLMA010000602         1522 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_542659, whole genome shotgun sequence.
ACCESSION   DATLMA010000602 DATLMA010000000
VERSION     DATLMA010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542659"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..604)
                     /locus_tag="VNA10_07725"
     CDS             complement(<1..604)
                     /locus_tag="VNA10_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex protein Rrp42"
                     /protein_id="HVG37609.1"
                     /translation="MSEEIVSELMRAHVYRLASTGQRVDGRRLDEPRKLSVSRSFVTT
                     AEGSARVKLGNTDVLVGIKMSVGEPYPDTPNTGVLSTSVELIPMASPTFEAGPPRPDA
                     IELARVVDRGIRESKMVSMEKLCITRKEKVWILFIDIHVLDYDGNLFDACSYGAVAAL
                     ASAVAPAKAQGLGDDFPLPVEHWPVSVTTAKIKDLLLVDPS"
     gene            complement(604..1434)
                     /gene="rrp41"
                     /locus_tag="VNA10_07730"
     CDS             complement(604..1434)
                     /gene="rrp41"
                     /locus_tag="VNA10_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010901698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex exonuclease Rrp41"
                     /protein_id="HVG37610.1"
                     /translation="MEDIEHIEKEMKLINSDGRRLDGRRFDELRPIRIEAGVLRRADG
                     SAYIEWGGNKVLAAVYGPREAHPRHLQDPARALVQCRYNMAPFSVSDRKRPGPDRRSV
                     EISKVISEAFSSVVFKEQFPRTSVDIFIEVLQADAGTRCAGLTAASVALADAGVPMRD
                     LVTSCASGKIDGVVCLDLNKDEDNFGDADCPMAIVPRTGDVVLLQMDGHLTYDEFQKA
                     MGLSIDATKRIYEMQRDALRRRYSVTLEDILKESPPASAPVEPEPEQPPEDDFGPEGI
                     "
BASE COUNT          234 a          499 c          504 g          285 t
ORIGIN      
        1 ggcttggatc gacgagcagg aggtccttga tcttcgccgt cgtcacgctg actggccagt
       61 gctcgaccgg gagcgggaag tcgtcgccga ggccttgcgc cttcgcaggg gcgaccgccg
      121 aggcgagggc cgcgaccgcg ccgtaggagc acgcgtcgaa cagattcccg tcgtaatcga
      181 ggacgtggat gtcgatgaac aggatccaca ccttctcttt ccgcgtgatg caaagcttct
      241 ccatgctgac catcttcgac tcgcggatgc cgcggtcgac gacccgggcc agctcgatgg
      301 catcgggccg cggtgggccc gcctcgaagg tgggactcgc catcgggatc agctcgacgc
      361 tcgtcgaaag gaccccggtg ttcggggtgt cgggatacgg ttcgccgacg gacatcttga
      421 tgccgaccag gacgtccgtg ttcccgagct tcacgcgggc gcttccttcc gccgtcgtga
      481 cgaacgaacg ggagacactc agctttcgag gctcgtcgag gcgacgtccg tcgacccgct
      541 gtcccgtcga tgcgaggcgg tagacatggg cccgcatcaa ctcggagacg atctcttcgc
      601 tcatcagatc ccctccgggc cgaagtcgtc ctcgggcggc tgttcgggct ccggctcgac
      661 gggtgccgat gcgggcggcg actccttcag gatgtcttcg agcgtgacgg agtagcgacg
      721 tctgagcgca tcgcgctgca tctcgtagat ccgcttcgtc gcgtcgatcg ataggcccat
      781 cgccttctgg aactcgtcgt aggtgaggtg gccgtccatc tggaggagca cgacgtcccc
      841 ggtccggggc acaatcgcca tggggcagtc cgcgtccccg aagttgtctt cgtccttgtt
      901 gaggtcgagg cacacgacgc cgtcgatctt tccggaggcg catgatgtga ccaggtcgcg
      961 catcggaacc cccgcgtcgg cgagggccac gctggccgcc gtcaggccgg cgcatcgcgt
     1021 gcccgcgtcg gcttggagga cctcgatgaa gatgtcgacc gacgtgcgcg ggaactgctc
     1081 cttgaagacg accgagctga acgcctcgga gatgaccttc gaaatctcga ccgaacgccg
     1141 gtcggggccg ggccgcttgc gatcggacac gctgaagggc gccatgttgt atcggcactg
     1201 gacgagagcc cgcgcgggat cctggaggtg cctcgggtgc gcctcgcgcg gaccgtagac
     1261 ggcggcgagg accttgttcc cgccccattc gatgtacgcg gatccgtccg cccgccggag
     1321 gacccccgcc tcgatccgga tcggtcgcaa ctcatcgaat ctccggccat ccaggcggcg
     1381 tccgtcggaa ttgatcagtt tcatttcttt ctcgatgtgc tcgatgtctt ccatggaaaa
     1441 ccttcctcag gagggcctcg gccctcgtcc tggcggtcgc tcccgctcga tcagttcgcg
     1501 cacggtttcc gtgaggccga cc
//
LOCUS       DATLMA010000603         1662 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_902001, whole genome shotgun sequence.
ACCESSION   DATLMA010000603 DATLMA010000000
VERSION     DATLMA010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902001"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VNA10_07735"
     CDS             complement(<1..458)
                     /locus_tag="VNA10_07735"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HVG37611.1"
                     /translation="MPTKWNFEAEYIQSCNCAWGCPCNFDALPTTGNCEALISWHIRK
                     GTFGETKLDGVTFAWGLWWPLAIHMGGGTGRVYIDPKAKPDQRAAIEKITGGKEGGGV
                     FAVFPSTLTRAIPAKTARIDFKFKGVDSSFSVEGVGEVQSEHIKNPVTGAP"
     gene            577..1350
                     /locus_tag="VNA10_07740"
     CDS             577..1350
                     /locus_tag="VNA10_07740"
                     /inference="COORDINATES: protein motif:HMM:NF021465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HVG37612.1"
                     /translation="MPETVRAGPAGLLRHLTIPVAAALALAVGAAWYATWASADTLMA
                     LAAPSILRATDLVLFFVLLVVMMVAMMLPSALPMIVAYRGITRLEAGRPTKPADDAAT
                     ALFIAPYFLVWGAFGVAALLALSALGLMGAMTSPLAFASAVTLVAAGLWQVTRTKEVC
                     LTQCTSPMSFVLHHWRSGRIGAAWMGFRHSLYCIGCCWLFMLVLFVSGSMSLLWMGGL
                     SVVIFAEKLGVRPGLFSRVIGVLLVAFGALAGVGAFLSM"
     gene            complement(1400..>1662)
                     /locus_tag="VNA10_07745"
     CDS             complement(1400..>1662)
                     /locus_tag="VNA10_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014371053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HVG37613.1"
                     /translation="NLYYNINQVSFRQAIVPVRLQGRLNATMRTIVWGTLPLGAIAGG
                     VLGQAIGVRPAIIVGLVGGAFSFLWVLFSPVRQIREMPESAA"
BASE COUNT          247 a          567 c          507 g          341 t
ORIGIN      
        1 ggagcgcccg tcaccgggtt cttgatatgc tcgctctgga cctcaccgac cccttcgacg
       61 gagaaggagc tgtcgacccc cttgaacttg aaatcgatcc tcgccgtctt agcaggaatc
      121 gctcgggtca gcgtcgacgg gaagaccgca aagaccccgc caccttcctt gccgcccgta
      181 atcttctcaa tcgccgctcg ctggtccggt ttcgccttcg ggtcgatgta gacgcggccc
      241 gtcccgccgc ccatgtgaat cgcgagcggc caccagaggc cccacgcgaa cgtcacgccg
      301 tccagcttcg tctcgccgaa cgtccctttc cggatgtgcc atgagatgag ggcctcgcaa
      361 ttccctgtcg tcgggagcgc atcgaaattg cacgggcatc cccacgcaca gttgcaactc
      421 tggatgtact ccgcctcgaa gttccacttt gtcggcaaaa tcgaacctcc tcgcgaggtt
      481 tcgcgcattc gctctcacct acttaagccg ttcaccatgc ggtcccggcc gcgtgttccg
      541 cacgttcata acgccagcct tgtttccggg ctgcgcatgc ccgaaacggt ccgggcgggg
      601 cctgcagggc tccttcggca tctcacgatc cccgtggccg cggcactcgc cctggccgtc
      661 ggagccgcgt ggtatgcgac gtgggcatcc gccgacactc tgatggcgct cgcggcgcct
      721 tcgatcctga gggccacgga cctcgtcctc ttcttcgtcc tcctcgtcgt gatgatggtc
      781 gcgatgatgt tgccgtcggc cttgccgatg atcgtggcgt atcgcggtat cacgcgtctc
      841 gaggccggtc gacccacgaa gcccgcggat gacgcggcga ccgccctgtt catcgccccg
      901 tacttcctcg tctggggcgc gttcggggtc gcggccctcc tggcgttgag cgccctcggg
      961 ctcatgggag ccatgacaag tccgttggcc ttcgcatccg cggtgacgct cgtcgcggcg
     1021 ggcctctggc aagtcacccg aacgaaggaa gtctgcttga cgcagtgcac ctcgcccatg
     1081 tccttcgtcc tgcatcattg gcgatccggt cgaatcggtg cggcatggat gggatttcgc
     1141 cactccctct actgcatcgg ctgctgctgg ctgttcatgc tcgtcctctt cgtctcggga
     1201 tcgatgagcc tcctctggat ggggggcctt tcggtcgtga tcttcgcgga gaagctcggc
     1261 gtgcggccgg gcctgttctc ccgggtcatt ggcgtcctcc tcgtggcctt cggggctctt
     1321 gccggcgttg gcgcgttcct ctcaatgtga gggtcgtcgg cggattgacg acccatgcct
     1381 cgacggcaac ggtccgcgat cacgccgcgg actcgggcat ctcacggatc tggcggaccg
     1441 gcgagaagag gacccagagg aacgagaatg cgccgccgac gaggcccacg atgatggcgg
     1501 gcctcacccc gatggcctgg cccagaacgc cgcccgcaat ggccccaagg ggcaatgttc
     1561 cccacacgat ggtccgcatc gtcgcgttca gacgtccttg gagacgaacc gggacgatgg
     1621 cctggcggaa actgacctga ttgatgttgt aatagagatt gc
//
LOCUS       DATLMA010000604         1500 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_119946, whole genome shotgun sequence.
ACCESSION   DATLMA010000604 DATLMA010000000
VERSION     DATLMA010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119946"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VNA10_07750"
     CDS             complement(<1..392)
                     /locus_tag="VNA10_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013705733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HVG37614.1"
                     /translation="MSMGDGWHGPLNKVDAFRYEIPRSYKPAMRTNGVVFIDESMVPQ
                     LRQDQAPEQVANVATMPGILGDAMAMPDIHWGYGFPIGGVAAFDYDAGVISPGGIGYD
                     INCLARGSNVLTSLGYRLAIDRFGDCWR"
     gene            complement(713..>1500)
                     /gene="speB"
                     /locus_tag="VNA10_07755"
     CDS             complement(713..>1500)
                     /gene="speB"
                     /locus_tag="VNA10_07755"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HVG37615.1"
                     /translation="TCSFRGGSRFAPRAIREASYNFETYMMDHQRDLRDIPVADLGDT
                     PTFGASTEMVDGVTKMAAGVVGAGKIPIVIGGEHSLAPAVVRAFPKDIGVIGIDAHLD
                     FRDSYLSDKWSHACSARRIADHVGVEHVVYIGVRSYSREEREDLERLGLTYVSVFDVH
                     ERGIGASVERAVKAINRDKVYLTIDIDGVDPAFAPAVGNPEPFGLAPLQVKKVIGMLA
                     PDLVGMDLNEVSPAWDFGQTSLLAARLIREAIVAIGEARGHVG"
BASE COUNT          263 a          504 c          474 g          259 t
ORIGIN      
        1 tgacgccaac agtccccaaa ccgatcgata gccaggcgat agccgaggga ggtcaggaca
       61 ttcgagcctc gagcaaggca gtttatgtcg tagcctatcc cccccggtga gatcacccct
      121 gcatcgtagt cgaaggctgc cactccgccg atcgggaagc cataacccca atggatatcc
      181 ggcatcgcca tcgcatcccc caggatgccg ggcatcgtgg cgacgttcgc cacctgctcg
      241 ggtgcctgat cctgccggag ctggggcacc atcgattcgt cgatgaacac aacgccgttc
      301 gtgcgcatgg cgggcttgta ggaccgcggg atttcgtagc gaaacgcatc gactttgttc
      361 agcggcccat gccatccgtc gcccatggac atccggaggt gcgcctaggg gcggagtgca
      421 cataaacgtt cgtgcagacc gctagtccgt cgcaaacttc atgccgctgc cgtgatatgc
      481 cgtaccacgg gttgggacga gctccggatc cgctcttcct gggtcgcctt ccggtgggca
      541 tgcgcggccg ggattcgcgg ggctcgggtt ccccgaggac gaggggggag gaagtcgggg
      601 aagcccgcgg ttccgcgggt ggccagagct cgtcgcgccc ttttccttcc atcggttcgc
      661 acgcaccgcc tagccagccg atagatttcc aaggccgtcg gcgacgtgca cgttatccga
      721 catggccccg cgcctctccg atggcgacga tcgcctcgcg aatgaggcgg gccgcgagca
      781 gcgacgtctg cccgaaatcc cacgccggac tcacctcgtt caggtccatc ccgacgaggt
      841 ccggggcgag catcccgatg accttcttga cctgaagcgg cgcgagcccg aacggctccg
      901 gatttccgac ggccggcgca aacgcgggat cgacgccgtc gatgtcgatc gtgaggtaca
      961 ccttgtcgcg gttgatggcc ttcacagcgc gctcgaccga tgcgccgatc cccctctcgt
     1021 ggacatcgaa gacgctgacg taggtcagac cgaggcgctc gagatcctcc cgctcctcgc
     1081 ggctgtagga ccgcaccccg atgtagacga cgtgctccac cccgacgtgg tccgcgatcc
     1141 gccgcgccga acaggcatgg gaccacttgt ccgagaggta cgagtcgcgg aagtcgaggt
     1201 gcgcatcgat cccgatgacg ccgatgtctt tcgggaacgc ccgcacgacg gccggcgcga
     1261 ggctgtgctc tcccccgatg acgattggaa tcttcccggc gccgacgaca cccgcggcca
     1321 tctttgtcac gccgtccacc atttccgtcg aggccccgaa agtcggcgtg tcgcccagat
     1381 cggcgacggg aatgtctcgg aggtcgcgct ggtggtccat catgtacgtc tcgaaattgt
     1441 acgaggcctc gcgaatcgct cgaggcgcga aacgggagcc gccacggaac gagcacgtga
//
LOCUS       DATLMA010000605         1038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_903016, whole genome shotgun sequence.
ACCESSION   DATLMA010000605 DATLMA010000000
VERSION     DATLMA010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903016"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..>1038
                     /locus_tag="VNA10_07760"
     CDS             13..>1038
                     /locus_tag="VNA10_07760"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HVG37616.1"
                     /translation="MNDFSVSRRHAHLKYENGEWVLHDNHSTNGIRVNDRHVPNAPVG
                     SGDRAVIGTFTLRFQEEPVEAETPAKRMMDSTSTCIRPIAEFNKDFGLEKGSALVSSD
                     STAGRKRVVLDVAYKNKVFEILVQVAKTLISLDDLETVLDKVMDLIFEYLPIDRGFLL
                     LEEHGDLSLRISRFKSGQRMTTDGTLPYSRTIVDMVVRDKVAVLTSDAQRDERFEAGQ
                     SIRLQQIRSAMCAPLWNRDSVIGVIHVDSPLHVGTFTERDLDLLTALANFAAVAIERA
                     RLHDRVAEEKRIRGRLERYHSPQVVDEIIADVQATGSFKEVRTKTVTILFADLVGFTS
                     WSEKMEAA"
BASE COUNT          194 a          340 c          329 g          175 t
ORIGIN      
        1 aacgacatcg ttctgaacga tttttcggtc tcgcggcggc acgcccatct gaagtacgag
       61 aacggcgagt gggtcctgca tgacaaccac tcgaccaacg gcatccgggt caacgaccgc
      121 cacgtgccga atgctcccgt cgggagcggc gaccgcgcgg tcatcggcac gttcacgctt
      181 cggttccagg aggagccggt cgaggcggag acgccggcaa agcggatgat ggactcgacc
      241 tcgacgtgca tccgcccgat cgcggaattc aacaaggact tcggcctgga gaagggctcg
      301 gcgctggtgt ccagcgattc caccgccggt cgcaagcgcg tcgtcctcga cgtcgcctac
      361 aagaacaagg tcttcgagat cctcgtgcag gtcgccaaga cgctcatttc actggacgac
      421 ctcgagacgg tgctcgacaa ggtcatggac ctgatcttcg agtacctccc gatcgaccgc
      481 gggtttcttc tcctcgagga gcacggcgat ctcagcctcc gcatcagccg cttcaaatcg
      541 ggccagcgga tgacgaccga cggaacgctc ccgtactccc gcacgatcgt cgacatggtc
      601 gtgcgcgaca aggtcgcggt gctgacctcg gatgcgcagc gggatgagcg gttcgaggcg
      661 gggcagtcga tccggctcca gcagatccgc tccgccatgt gcgcgccgct ctggaaccgc
      721 gattccgtca tcggcgtcat ccacgtggac tcccctctgc acgtgggcac cttcacagag
      781 cgtgacctcg acctcctgac cgcgctggcg aatttcgccg ccgtcgcgat cgagcgcgcg
      841 cggctccacg accgcgtcgc ggaagagaag cgcatccggg gaaggctcga gcggtatcac
      901 tcgccgcagg tggtcgacga gatcatcgcc gacgtgcagg cgaccgggtc gttcaaagag
      961 gtgcggacga agaccgtgac gatcctcttc gcggatctcg tcggcttcac gtcctggtcg
     1021 gaaaaaatgg aggcagcg
//
LOCUS       DATLMA010000606         1924 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_239477, whole genome shotgun sequence.
ACCESSION   DATLMA010000606 DATLMA010000000
VERSION     DATLMA010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239477"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..158)
                     /locus_tag="VNA10_07765"
     tRNA            complement(85..158)
                     /locus_tag="VNA10_07765"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(121..123),aa:His,seq:gtg)
     gene            300..845
                     /locus_tag="VNA10_07770"
     CDS             300..845
                     /locus_tag="VNA10_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37617.1"
                     /translation="MTGGTAVRRVHAIRNEMEDRLKRSGLVVMLLGSSGRGLDERRAV
                     AQLLTTRGIVALVPEDDFPPEIGPSVIEEDILEQSDVDLVFLSIESWGAATEFGQFSS
                     NPRIAPKLRVLVRPEYHPVHSPSGSYLSDLYLTHLVRYGHVYPVDGGRQAPVPSAKAL
                     IPMLAERHREIKALRSSSITR"
     gene            880..1248
                     /locus_tag="VNA10_07775"
     CDS             880..1248
                     /locus_tag="VNA10_07775"
                     /inference="COORDINATES: protein motif:HMM:NF024988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HVG37618.1"
                     /translation="MKKLSETEDTDPGILDHLRAYTALDNPIRLRAFRLIHDSPGLPF
                     HQIAKAIRIESGLLAYHMGVLKAAGLVDVAYARDGRQVTAYRLGARGDELFSELFANP
                     SSRSSSRRASVLQRVAARQH"
     gene            1350..1481
                     /locus_tag="VNA10_07780"
     CDS             1350..1481
                     /locus_tag="VNA10_07780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37619.1"
                     /translation="MRTINASEVNGETMTPTPPANSNANPRTPAKMLVLFLRAATAS"
     gene            1617..>1924
                     /locus_tag="VNA10_07785"
     CDS             1617..>1924
                     /locus_tag="VNA10_07785"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020619555.1"
                     /note="catalyzes the formation of L-citrulline from
                     carbamoyl phosphate and L-ornithine in arginine
                     biosynthesis and degradation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HVG37620.1"
                     /translation="MGAKRDLVSMLDVKDDLVGLLELAASIKNRTKAGEPYEPLRGKT
                     LAMLFEKASTRTRVSFEVGMTQLGGHALFLSPNDLQIGRGETISDTARVLSRYVDGIM
                     "
BASE COUNT          371 a          626 c          597 g          330 t
ORIGIN      
        1 gaataaccga accctctctc atgaagatgc cgcgattccc gcgccgagag gtccagaccg
       61 ggggaagggc gagccgtacg cgagggccgg gagcgagatt tgaactcgcg tcaagggatc
      121 cacagtcccc tagcataacc aggctagccc atcccggccg cacgccgccc aaccggggag
      181 gggaatatag tattttgctc aacgcgatcc agcgaaccgt cgaccgatcg gagttgtttc
      241 actgacctct caactgggtc ctcaactagc cgcgcgacgc atgtccgccg aggggagccg
      301 tgaccggggg caccgcagtc cgacgcgttc atgcgattcg caatgagatg gaggaccgac
      361 tcaagcgatc cggcctcgtg gtcatgctct tgggctcctc gggacgcgga ctcgacgagc
      421 gacgagcggt cgcgcagctg ctgacgaccc ggggaatcgt cgcccttgta ccggaggacg
      481 acttcccccc ggaaatcggt ccctccgtca tcgaggagga catcctcgaa cagagcgacg
      541 tggaccttgt attcctgagc atcgagtcgt ggggcgccgc tacggagttc ggccagttct
      601 cgtccaatcc tcgaatcgcg ccgaaactcc gcgtcctggt ccgaccggag taccacccgg
      661 tgcacagccc ctcggggagc tacctctccg atctgtacct gacccatctt gtccggtatg
      721 gacacgtgta ccccgtcgat ggcggacggc aagcgccggt tccctcggcg aaggccctca
      781 ttcccatgct ggcggagcgc catcgcgaga tcaaggccct ccgatcgtcg agcattacga
      841 ggtaaatata tttatacccc gtagaatatc gttgacgaca tgaagaagct gtctgagacg
      901 gaagacaccg accccgggat tctcgaccac ctacgggctt acacggcgct tgataatccg
      961 atccggctgc gggcgtttcg cctcattcac gattcccccg gcctgccgtt ccatcaaatc
     1021 gcgaaggcta tccggatcga gagcgggctt ctggcctacc acatgggcgt gttgaaggcc
     1081 gcgggactcg tcgatgtggc ctacgcgcgg gacggtcgcc aggtgaccgc ctatcgattg
     1141 ggcgcgaggg gcgacgaact tttttcggag ctcttcgcca acccatcgag ccggtcctcg
     1201 agtcggcgcg cgagcgtcct ccaacgcgtc gccgcacggc aacactgacg caacgcaggc
     1261 ctcagtggtt tcggggcttt ctaggaagcc cgacaatcgc gtttcgcgcg aggaaaaagg
     1321 cgacgagcag gaacacaatc ccggtactca tgaggacgat caacgcgagt gaggtcaacg
     1381 gggagacgat gaccccgacg ccgccagcga acagcaacgc caatccgagg acaccggcga
     1441 agatgctcgt tctcttcctg cgcgcggcga ccgcctcctg aagccgccgc cgctcggcgg
     1501 ccctcgaagg taccggctcc acgctccctc attcgagcga ggttatttga tgactgcgcc
     1561 tccgtcgcgg cgatgcacaa gtgttttgta cggaccctcg gatgggccgc cagtccatgg
     1621 gcgcgaagcg cgatctcgtc tcgatgctcg acgtgaagga cgacctcgtc ggcctcctcg
     1681 agctcgcggc gagcatcaag aaccgcacga aggccgggga gccgtacgaa ccgctgcgcg
     1741 ggaagaccct cgcgatgctc ttcgagaagg cctcgactcg gacgcgggtt tcgttcgagg
     1801 tcgggatgac gcagctcggc ggccatgcgc tcttcctgag cccgaacgac ctgcagatcg
     1861 gccgcggcga gacgatctcc gacacggcga gggtgctgag ccgctatgtg gacggcatca
     1921 tgta
//
LOCUS       DATLMA010000607         1528 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_481179, whole genome shotgun sequence.
ACCESSION   DATLMA010000607 DATLMA010000000
VERSION     DATLMA010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481179"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1528
                     /locus_tag="VNA10_07790"
     CDS             <1..>1528
                     /locus_tag="VNA10_07790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide transporter"
                     /protein_id="HVG37621.1"
                     /translation="ASVVGLAVGAVVNPTLANAFFTGAGYFVQTKVVTTIAEDQSPGM
                     SQIILSFGLFTFGVSLVAVAYLLWQIPRRREPAYSLVVIWALAAIFMAITAARFIFNA
                     APAFAISAGYAIDQVLVRADFTTMRRTYRSLAAGSWRNAVRKSVKPRHILVVLGLVFL
                     VLIPNVWWAVDASIPFELKSQYDRQVANLLPSFLRPSYNPSSGSPFYFGAFGYSIPKS
                     TDYYPAAWQWFATQDANTPPELRPAYLSWWDYGFEAVDRGVHPTVADNFQDGVAIAGQ
                     FITAQNETAGIAILTIRLLEGDFLTHHRDFRPGVQTALSGAGLPIDAIKSVFARPQDY
                     ISIVLADPVTYGLWAPDLQSLNAQYIFLTHLLTRLLNEDQIVSLYHDVRDATGWNIGY
                     FAVDARLFPTSASNTGIFYAPVKLSDHRVLNLPDGRVLPFEFFQILANTNRGQNIPIQ
                     FVSPGDQVQGQNIQYQPAFYKSMFYRAYIGYSPKDLNSTDTGIPGISGSLQNAPPVPA
                     W"
BASE COUNT          265 a          543 c          430 g          290 t
ORIGIN      
        1 cgcaagcgtc gtcggcctcg ccgtcggggc cgtcgtcaac cccactttgg ccaacgcgtt
       61 cttcacgggc gcaggctact tcgtccagac caaggtcgtc acgaccatcg ccgaggacca
      121 gtcgcccggg atgtcccaga tcatcctgtc ctttggcctc ttcacgttcg gcgtgagcct
      181 cgttgcagtc gcgtatctgc tgtggcagat tccgcggcgt cgagaaccgg cgtacagcct
      241 cgtcgtaatc tgggcgctcg cggcaatctt catggcgatc acggccgcgc ggttcatctt
      301 caacgcagcg cccgcgttcg cgatcagcgc ggggtacgcg attgaccaag tcctcgtccg
      361 cgcggacttc acgacgatgc gtcgcaccta tcggtccctc gcggcgggca gctggcggaa
      421 tgcggtccgg aaatccgtga agccacgtca catcctcgtg gtcctaggtc tcgtcttctt
      481 ggtcctcatc cccaacgtat ggtgggccgt cgacgcatcg atccccttcg agctcaagag
      541 ccagtacgat cggcaggtcg cgaatcttct gccctccttc ctgcgaccct cgtacaatcc
      601 gagcagcgga tcgcccttct acttcggggc gttcggctac agcatcccga agtccacgga
      661 ctattacccg gcggcatggc agtggttcgc gacgcaggat gcgaataccc cgccggagct
      721 ccggcccgcc tacctgtcgt ggtgggacta cggtttcgag gccgtcgacc gcggagtcca
      781 tccgaccgtg gcggacaact tccaggacgg cgtcgcgatc gccgggcagt tcatcacggc
      841 ccagaacgag acggcgggga tcgcaatcct cacgatccga ctcttggaag gagacttcct
      901 cacccatcat cgggacttcc gacccggggt acaaacggcc ctctcgggag ccggcctccc
      961 catcgacgcg atcaagagcg tcttcgcgcg gccgcaggat tacatttcga tcgtcctcgc
     1021 agacccggtc acctacggac tgtgggcgcc cgatctccaa tccctcaacg cgcagtacat
     1081 cttcctgacg cacctgctca cgcgcctcct gaacgaggac cagatcgtct cgctgtacca
     1141 cgacgtccgg gacgcgaccg ggtggaacat cggctacttc gcggtcgacg cgcggctctt
     1201 cccgacgagc gcctcgaaca ccgggatctt ttacgctccc gtgaagctct cggaccaccg
     1261 cgtcctcaac ctgccggacg gccgtgtctt gccgttcgaa ttcttccaga tcctcgcgaa
     1321 cacgaatcgc ggccaaaaca ttccgatcca gttcgtgtca ccgggcgatc aggtccaggg
     1381 ccagaatatc cagtaccaac cggccttcta caagtcgatg ttctaccgcg cgtacatcgg
     1441 ctattcaccg aaggacctca actcgacgga caccggcatc cccggcatca gcgggtcgct
     1501 gcagaacgct ccgccggtcc ccgcatgg
//
LOCUS       DATLMA010000608         3492 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_601832, whole genome shotgun sequence.
ACCESSION   DATLMA010000608 DATLMA010000000
VERSION     DATLMA010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601832"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VNA10_07795"
     CDS             complement(<1..268)
                     /locus_tag="VNA10_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37622.1"
                     /translation="MEELRGYFAAHSQGLGHATRAVALARGLIDRRRDLYLLFLAGSP
                     ALDLVVANGFDALTMPPAPDWKATDGVLGPVWRWYRDYARYLRIA"
     gene            463..870
                     /locus_tag="VNA10_07800"
     CDS             463..870
                     /locus_tag="VNA10_07800"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HVG37623.1"
                     /translation="MFYDEVVNRGNLSIIDKVTAENYVDHTAAPGLPPGREGERLWFQ
                     MLRAAFPDGHTTIDDIIAEGDKVVVRGTMTGTHTGEFMGIPATGKEVKISGIDITRFE
                     NGQSTEHWGQWDVAGMMVQLGVAPPPPGAPETE"
     gene            955..1989
                     /locus_tag="VNA10_07805"
     CDS             955..1989
                     /locus_tag="VNA10_07805"
                     /inference="COORDINATES: protein motif:HMM:NF016030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase large subunit PriL"
                     /protein_id="HVG37624.1"
                     /translation="MATLSKYPFLRESSAFIRAEKVSLEEILLEPAYARARSLGKARV
                     LEALERGAASDRVAIAPADQLAQLLAYPVARIFVSSLEDTYLIRRFALREAIAAEGRL
                     ESESDDFVIHMASQLAMDLRREDGGFRLHFTDFLRFTNTMRDAPWKLINQRVDRGYVT
                     MQRAKALRVMRNAIQRHIEEGLPLPVNDDIVSAFRADLREIRGILEAKKATFKAEDIG
                     KVSITRFPPCMYNLLAQIQNHENVPHMGRFAIVAFLHHIGLGNEEIFRVFGDVPDFAA
                     DVTKYQIEHITGTSSPTEYTPPECATMKSYGICPGPDRICLTIKHPLQYYRVKGREQR
                     PRGESASTAT"
     gene            complement(1986..2615)
                     /locus_tag="VNA10_07810"
     CDS             complement(1986..2615)
                     /locus_tag="VNA10_07810"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015503968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HVG37625.1"
                     /translation="MVLDRYRKAADAFLVPVASRMLTVNPNLVSWIAFLAAVGAGISF
                     FVGGGGLLGLGLVLMLVASYLDALDGKIAKMAGKASARGDFLDHVLDRYADVFMLGGI
                     AFNAMYCRLGVGTLALLGVLLTSYMGTQAQAVGQGRAYGGVLGRADRLVLLFLGGLIQ
                     LIVAPSGGVTFGVGILTFGPVEWFMVLFAVLGNATAVQRGVKTWRGFSV"
     gene            complement(2606..3127)
                     /locus_tag="VNA10_07815"
     CDS             complement(2606..3127)
                     /locus_tag="VNA10_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012966117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase family protein"
                     /protein_id="HVG37626.1"
                     /translation="MIVAITGTPGTGKSSACDVLTKRGYVVVDLDEIARREGLIVGRD
                     EKRDTDEVDVDALRQGLRIPAKVSFLKSHYSHRMDVNLAVVLRCRPSVLRARLEARGW
                     PAEKVRENVEAEAIDVILQEAVARLPFVFEVDTTNATPEETAEAILAILQGETKGHEP
                     GSVDWASEVLSWY"
     gene            complement(3155..>3492)
                     /locus_tag="VNA10_07820"
     CDS             complement(3155..>3492)
                     /locus_tag="VNA10_07820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37627.1"
                     /translation="EASVPWMLVLLGVTSILVGLASENLSEMIFEVFIGLLLSGAVAT
                     GMALSPILVGVAFVSPDSVPAFLFHYGFLLFVLGFVVDLVGTSTGLALRERYFLRRRG
                     PLPVVSERK"
BASE COUNT          701 a         1148 c         1125 g          518 t
ORIGIN      
        1 gggcgatccg aaggtaccga gcgtagtccc ggtaccatcg ccataccggc ccgaggaccc
       61 cgtccgtcgc cttccaatcg ggcgcgggcg gcatcgtgag ggcgtcgaac ccgttcgcca
      121 cgacgaggtc caatgccggc gaaccggcga ggaagaggag atacaggtcc cgccgtcgat
      181 cgatgaggcc gcgggcgagc gcaacggctc gggtcgcatg gcccagtccc tgggagtggg
      241 ccgcgaaata cccgcggagt tcctccatcg tgcgactcat tgtccgcttc cagaaagacc
      301 ttcggatgag acggcagcag actgactcaa cgaccggatc cgtgaacgag ggcgagccgg
      361 gtacaagcgg cgttatatag agggcggctc ctaggggcgc acgttagggg atcacaggag
      421 gagaaccaca tgggagaaga ggagaacaaa gcgactgcga gaatgtttta tgatgaagtc
      481 gtgaaccgag ggaacctcag catcattgac aaggtaacgg ccgagaacta cgtcgaccac
      541 accgcggctc cgggactgcc tcccggccgc gaaggcgaga ggttgtggtt ccagatgctc
      601 cgtgcggcct tccccgacgg ccacacgacg atcgatgaca tcatcgcgga aggcgacaag
      661 gtcgtggtcc gcgggacgat gacgggcacc cacaccggcg agttcatggg catcccggcg
      721 accgggaagg aagtcaagat ctcgggcatc gatatcaccc ggttcgagaa cggacagagc
      781 acagagcact ggggacaatg ggacgtcgcg ggaatgatgg tgcagttggg cgtcgcgccg
      841 cccccgcccg gggcgcccga gaccgagtga aggtcacgcc ctgattcgta gctccggttt
      901 cgcgggtccc cgcgtcggcc ttttatggcc ccgcgtgttc cttcggacgt ggagttggcg
      961 accctctcca agtacccgtt cctccgggaa tcgtctgcgt tcatccgcgc ggagaaggtc
     1021 agcctcgagg agatcctgct ggaacccgcg tatgctcgcg cccggagcct cgggaaggca
     1081 cgggtcctgg aagccctcga gcgcggggcc gcctcggatc gagtcgccat cgcgccggcg
     1141 gaccaactcg cccagctcct cgcgtatccc gtggcgcgga tcttcgtctc ctcccttgag
     1201 gacacgtatc tgatccgacg gttcgccctg cgcgaggcga tcgccgcgga aggacgcctc
     1261 gaatccgaat ccgacgattt cgtgatccac atggcctcgc agctcgcgat ggacctccga
     1321 cgggaggacg gcggcttccg cctccacttc accgacttcc tgcgcttcac gaacacgatg
     1381 cgcgacgcgc cgtggaaact gatcaaccaa cgggtggacc gcggatacgt gacgatgcaa
     1441 cgggccaagg ccctccgggt catgcgaaac gcgatccagc ggcacatcga ggaaggcctt
     1501 ccgcttccgg tgaacgacga catcgtctcc gccttccggg cggacctccg agagatccgg
     1561 ggcatcctcg aagcgaagaa ggcgacgttc aaggcggagg acatcgggaa agtgagcatc
     1621 acgcggttcc cgccgtgcat gtacaatctc ctcgcgcaga ttcagaacca cgagaatgtc
     1681 ccacacatgg gccgcttcgc gattgtcgcg ttcctccatc acatcggcct gggcaacgag
     1741 gagatcttcc gcgtcttcgg ggacgttccg gatttcgcgg ccgacgtgac gaagtaccag
     1801 atcgagcaca tcacgggaac gtcgagtccg acggaataca cgccgccgga gtgcgcgacg
     1861 atgaaatcgt acggaatctg cccgggcccg gatcggatct gtctcacgat caagcatccc
     1921 ctccagtact atcgcgtcaa gggacgcgag cagcggcccc gcggggagag cgcctcgacc
     1981 gcgacctaga cggagaagcc ccgccacgtc ttcacgccgc gctgcaccgc cgtcgcgttg
     2041 ccgaggaccg cgaacaggac catgaaccac tccaccggtc cgaaggtcag gatgccaaca
     2101 ccgaaggtca cgccgcccga tggcgcgacg atcagctgga tcaggcctcc gaggaacagc
     2161 agcacgaggc gatccgcgcg gcccaggacc ccgccatagg cgcgcccctg accgacggcc
     2221 tgcgcctggg tccccatgta cgaggtcaag aggacgccga ggagggcgag cgtaccgacc
     2281 ccaagacggc agtacatcgc gttgaatgcg atcccaccga gcatgaacac gtccgcatag
     2341 cggtcgagca catgatccag gaagtcgccc cgcgcggacg ccttgccggc catcttcgcg
     2401 atctttccgt cgagcgcatc gaggtacgag gcgacgagca tcaacacgag cccgaggccg
     2461 aggagtccac cgcccccgac gaagaacgag atgcccgcgc cgaccgccgc gagaaaggcg
     2521 atccacgaaa ccaggttcgg gttgacggtc aacatccgag acgcgacggg gacgaggaac
     2581 gcatcggcgg ccttgcgata ccggtctagt accacgagag cacctcggat gcccagtcga
     2641 cggatccggg ttcgtgccct ttcgtctctc cctggaggat cgcgaggatc gcttcggcgg
     2701 tctcttccgg ggtcgcgttc gtggtgtcga cctcgaagac gaacggaagg cgagcgaccg
     2761 cctcttgcag gatcacgtca atcgcctccg cctcgacgtt ctcccggact ttctccgcgg
     2821 gccaaccgcg cgcctccagt cgggcgcgga ggacggacgg tcggcaccgc aggacgaccg
     2881 cgaggttcac gtccatccgg tgactgtagt ggctcttgag gaacgagacc ttcgcgggga
     2941 tccgcaatcc ctgtcgcaag gcgtcgacgt caacctcgtc cgtatcccgt ttctcgtcgc
     3001 gtccgacgat cagaccctcg cgccgcgcga tctcgtctag gtccacgacg acgtagcccc
     3061 tcttcgtgag gacatcacac gcggaggatt tcccggtccc cggcgtcccg gtgatggcca
     3121 cgatcatgcc gacgccatcg aagggggacc taaatcactt gcgttccgac acgaccggca
     3181 gaggacctcg acggcgtagg aagtaccgct cccgcagcgc gagccccgtg ctggtgccca
     3241 ccaggtcgac cacgaagccg agcacgaaga gcaggaatcc gtagtggaac aggaacgcgg
     3301 gcacggaatc gggggagacg aaggcgacgc cgacgagtat cggggacaag gccatcccgg
     3361 tcgcgacggc gccgctcagg agaagtccga tgaacacttc gaagatcatc tcggacagat
     3421 tctcactcgc gaggcccacg aggatggacg tgacgccgag gagcacgagc atccacggca
     3481 cggaggcctc gc
//
LOCUS       DATLMA010000609         1122 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_602083, whole genome shotgun sequence.
ACCESSION   DATLMA010000609 DATLMA010000000
VERSION     DATLMA010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602083"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..423)
                     /locus_tag="VNA10_07825"
     CDS             complement(1..423)
                     /locus_tag="VNA10_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37628.1"
                     /translation="MADLWVVVGFLAFFGTITGLLTITFLAFTRMDKDVRRARMFIME
                     KRIQRFLGSFTVAFIALTVLICASMIAVGLPVVIGTGLLVLWLGGMGYGTYELFLIVR
                     PPKGTLLRLIKKSNTGRSVLLEKAAILDRSGRDRDAAK"
     gene            complement(561..1067)
                     /locus_tag="VNA10_07830"
     CDS             complement(561..1067)
                     /locus_tag="VNA10_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HVG37629.1"
                     /translation="MSAGAMGPKRRRGRRGTMIIMGLVLIGAGLVVFRYSAYIAGQLD
                     SYISPPPTDSNNITGLVSPGGWYLPYAVWGFGFTLIGLGGTMLRSAFMSTMMGGGGGV
                     MAGGSSMSPDMLDKYMQQALSGARTATGQPGTSSALTKEIVKVKCRNCGNLEAEDATY
                     CRKCGQPL"
BASE COUNT          215 a          359 c          331 g          217 t
ORIGIN      
        1 tcacttcgct gcatcccggt ccctcccgga tcggtccagg atcgcggcct tctcgagcag
       61 caccgagcgg cccgtgttcg acttcttgat cagccggagc aacgtgcctt tcgggggccg
      121 cacgatcagg aacagctcat acgtcccgta gcccattccg cccaaccaga ggaccaacag
      181 cccggttccg atcaccacgg ggaggcccac ggcaatcatg gacgcgcaga tcaggacggt
      241 cagcgcgatg aacgcgaccg tgaacgagcc gaggaaccgc tgaatccgct tttccatgat
      301 gaacatccgc gcccgccgga cgtctttgtc catccgcgtg aacgcgagga atgtgatcgt
      361 gagaagaccg gtgatcgtgc cgaagaatgc gaggaatccg acgacgaccc agaggtctgc
      421 catggatggt cgaacgctcg gcctgccatt gccgccttcg ggcgaatata tctatcgttc
      481 cgaatgttct cttttgtcac taactgaggg cggacctcgg cacgggaatt gctcgcacgc
      541 caggaaacgg tctacgcgag ctagaggggc tgcccgcatt tccggcaata tgtcgcgtct
      601 tccgcttcca agttgccgca gtttcggcac ttgaccttca cgatctcttt cgttagcgcc
      661 gaactcgttc ctggttggcc cgtcgcagtg cgcgctcccg agagtgcctg ctgcatgtat
      721 ttgtcgagca tgtccgggga catggaagat ccgccggcca tgactccgcc gccccctccc
      781 atcatcgtgg acatgaacgc gctgcggagc atggtccctc ccagcccgat gagggtgaag
      841 ccgaatcccc ataccgcgta cgggagatac cagccgcccg ggctgacaag tccggtgata
      901 ttgttgctgt ccgtcggtgg cggactgata taggagtcga gctggcccgc gatgtatgcc
      961 gaatatcgga agacgacgag gcctgctccg atgaggacga gccccatgat gatcatcgtg
     1021 ccccggcgac ctcgtcttcg cttcgggccc atcgctcccg ccgacacttt cgaaacctcc
     1081 cccggtccgc aaggagggga ttcgtcgaag gaggattaaa gg
//
LOCUS       DATLMA010000610         1079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Thermoplasmata archaeon isolate SMAG_U13762
            k141_482100, whole genome shotgun sequence.
ACCESSION   DATLMA010000610 DATLMA010000000
VERSION     DATLMA010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37939640
            Sequence Read Archive: SRR8536941
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Thermoplasmata archaeon (soil metagenome)
  ORGANISM  Thermoplasmata archaeon
            Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 09:05:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,567
            CDSs (total)                      :: 1,546
            Genes (coding)                    :: 1,541
            CDSs (with protein)               :: 1,541
            Genes (RNA)                       :: 21
            tRNAs                             :: 21
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 3 of 5
            Pseudo Genes (internal stop)      :: 2 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Thermoplasmata archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_482100"
                     /isolate="SMAG_U13762"
                     /isolation_source="soil"
                     /db_xref="taxon:1906666"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="44.23 N 122.22 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1079)
                     /locus_tag="VNA10_07835"
     CDS             complement(<1..>1079)
                     /locus_tag="VNA10_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002770786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HVG37630.1"
                     /translation="VYVRRIEVIDLEGRAREVKLFFNQDFHLYGNEIGDTAYYDPHTG
                     SVIHYERNRYFLVNCRNSEASVADYFSCGVREGPGRRPSWKEAENGELDGSPVSWGHA
                     ESTVGVRVHVPAGGSGTAFYWLAAGQCYDEVVRINGVVCEKTPSELIRRTSDYWQAWV
                     RKEPRSFGDLPNSVADVFNRSLLILRTQIDNRGAIIAANDSDIEHFGGDTYSYMWGRD
                     GAFAAAALEKAGYSELCRKFFEFCRGALSEEGYLFQHYNPDGSLASNWHAWLRDGKEV
                     LPIQEDSTALILWALWLHYKCSRDVEFIRPLYETLILKSANFLVAHRDSDTRLPIPSY
                     DLWEERYGVHSYTVAAVIAGLRGAA"
BASE COUNT          200 a          343 c          325 g          211 t
ORIGIN      
        1 tcgccgcccc tcggaggccg gcgatcactg cggcgaccgt gtacgagtgg actccgtagc
       61 gctcctccca gaggtcgtaa gaggggatgg gcagtcgcgt gtcggaatcg cgatgcgcca
      121 ccagaaagtt tgcggacttc agaatgagtg tctcgtagag cggccggatg aactccacgt
      181 ccctcgagca cttgtagtga agccagagcg cccagagaat cagggcggtc gagtcttcct
      241 ggatgggcag cacctccttc ccgtcccgca gccacgcgtg ccagttgctg gccagcgatc
      301 catccgggtt gtagtgctga aagaggtatc cctcctcgga caacgccccg cggcagaact
      361 cgaagaactt ccggcacagc tccgagtagc cggccttctc gagcgcggcg gcggcgaatg
      421 ccccgtcgcg gccccacatg taggagtacg tatctccccc gaaatgctcg atgtccgagt
      481 cgttcgcggc gatgatcgcc cctcggttgt cgatctgggt tctcaagatg agaaggcttc
      541 gattgaagac gtccgcaaca gaattcggca gatctccgaa ggatcgcggt tcctttcgga
      601 cccatgcctg ccagtagtcc gacgttcggc ggatcagctc ggagggtgtc ttctcgcaaa
      661 cgaccccgtt gatgcggacc acttcgtcgt agcactggcc tgcagccagc cagtagaagg
      721 ccgtgcccga tcctccggca gggacgtgca cccgcacgcc gactgtcgac tccgcatgtc
      781 cccaggagac cggactaccg tcgagttctc cgttttcggc ctccttccag gatggccgcc
      841 ttccgggccc ctccctgaca ccgcaagaga agtaatcggc taccgacgct tcggaattgc
      901 ggcaattcac gaggaagtac cgattcctct cgtagtggat gacggacccg gtgtgagggt
      961 cgtagtacgc cgtgtctccg atctcgttgc cgtagaggtg aaagtcctgg ttgaagaaga
     1021 gcttgacctc gcgcgctctc ccttccaggt cgatgacctc aattcgcctg acgtagacg
//
